Carg04936 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04936
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	rRNA N-glycosidase
Location	Cucurbita_argyrosperma_scaffold_060 : 335039 .. 335971 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTTAACACTCATCCAGTTGAGGCCAACGTGCGCTTCGACTTGTCCAGTGCCACAAGCTCATCTTACAAAGCTTTTATCAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGACATTCCTGTGTTACTTTCGACTGTAATGGACTCGAGGCGCTTCATACTAATAGATCTCGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTATATATCGTGGCATACAGCACAGGCACAGTGTCCTACTTTTTTCAGCAAGTTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATACACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAGCTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACCACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCGGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCTAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTGACTTCGAACGTTGTGACCCAGAACATCAAGCTGCTGCTGAACATTGGTGCAACAGTTGATACAATGGCCGCCAACGATGTGGATGAGATGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGGAGATTGGCCGGCATGCAAATTATGTATCAGTGTAA

mRNA sequence

ATGATCAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTTAACACTCATCCAGTTGAGGCCAACGTGCGCTTCGACTTGTCCAGTGCCACAAGCTCATCTTACAAAGCTTTTATCAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGACATTCCTGTGTTACTTTCGACTGTAATGGACTCGAGGCGCTTCATACTAATAGATCTCGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTATATATCGTGGCATACAGCACAGGCACAGTGTCCTACTTTTTTCAGCAAGTTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATACACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAGCTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACCACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCGGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCTAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTGACTTCGAACGTTGTGACCCAGAACATCAAGCTGCTGCTGAACATTGGTGCAACAGTTGATACAATGGCCGCCAACGATGTGGATGAGATGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGGAGATTGGCCGGCATGCAAATTATGTATCAGTGTAA

Coding sequence (CDS)

ATGATCAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTTAACACTCATCCAGTTGAGGCCAACGTGCGCTTCGACTTGTCCAGTGCCACAAGCTCATCTTACAAAGCTTTTATCAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGACATTCCTGTGTTACTTTCGACTGTAATGGACTCGAGGCGCTTCATACTAATAGATCTCGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTATATATCGTGGCATACAGCACAGGCACAGTGTCCTACTTTTTTCAGCAAGTTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATACACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAGCTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACCACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCGGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCTAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTGACTTCGAACGTTGTGACCCAGAACATCAAGCTGCTGCTGAACATTGGTGCAACAGTTGATACAATGGCCGCCAACGATGTGGATGAGATGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGGAGATTGGCCGGCATGCAAATTATGTATCAGTGTAA

Protein sequence

MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVEIGRHANYVSV

Homology

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BLAST of Carg04936 vs. NCBI nr
Match: XP_022959960.1 (ribosome-inactivating protein cucurmosin [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 6.1e-159
Identity = 303/311 (97.43%), Postives = 304/311 (97.75%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M KSLALSFLFL IFLNT P +ANVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVL
Sbjct: 1   MNKSLALSFLFLTIFLNTRPADANVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG
Sbjct: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAAN-DVDEMTSGVPIRLSSCGHEMERKSV 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAAN DVDEMTSGVPIRLSSCGHEMERKSV
Sbjct: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDDVDEMTSGVPIRLSSCGHEMERKSV 300

Query: 301 EIGRHANYVSV 311
           E GRHANYVSV
Sbjct: 301 ENGRHANYVSV 311

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BLAST of Carg04936 vs. NCBI nr
Match: XP_023005049.1 (ribosome-inactivating protein cucurmosin [Cucurbita maxima])

HSP 1 Score: 564.7 bits (1454), Expect = 2.0e-157
Identity = 297/310 (95.81%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M KSLALSFLFLAIFLNT P +ANVRFDLS ATSSSYK FIKNLREALPKDGKVYDI VL
Sbjct: 11  MNKSLALSFLFLAIFLNTRPADANVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVL 70

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDS+RFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKG
Sbjct: 71  LSTVMDSKRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKG 130

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 131 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 190

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 191 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 250

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVE 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDT AANDVDE+TSGVPIRLSSCGHEMERKSV+
Sbjct: 251 GNRVQITNVTSNVVTQNIKLLLNIGATVDTTAANDVDEVTSGVPIRLSSCGHEMERKSVQ 310

Query: 301 IGRHANYVSV 311
            GRHANYVSV
Sbjct: 311 NGRHANYVSV 320

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BLAST of Carg04936 vs. NCBI nr
Match: 3BWH_A (Chain A, Atomic Resolution Structure Of Cucurmosin, A Novel Type 1 Rip From The Sarcocarp Of Cucurbita Moschata)

HSP 1 Score: 460.3 bits (1183), Expect = 5.2e-126
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 263
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 264 IGAT 268
           IGAT
Sbjct: 241 IGAT 244

[Close]

BLAST of Carg04936 vs. NCBI nr
Match: P84531.2 (RecName: Full=Ribosome-inactivating protein cucurmosin; AltName: Full=rRNA N-glycosidase)

HSP 1 Score: 460.3 bits (1183), Expect = 5.2e-126
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 263
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 264 IGAT 268
           IGAT
Sbjct: 241 IGAT 244

[Close]

BLAST of Carg04936 vs. NCBI nr
Match: ABY47624.1 (ribosome-inactivating protein, partial [Cucurbita moschata])

HSP 1 Score: 446.4 bits (1147), Expect = 7.7e-122
Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIK 260
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQ 236

[Close]

BLAST of Carg04936 vs. Swiss-Prot
Match: sp|P84531|RIP_CUCMO (Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata OX=3662 PE=1 SV=2)

HSP 1 Score: 460.3 bits (1183), Expect = 1.7e-128
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 263
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 264 IGAT 268
           IGAT
Sbjct: 241 IGAT 244

[Close]

BLAST of Carg04936 vs. Swiss-Prot
Match: sp|P29339|RIP2_MOMBA (Ribosome-inactivating protein momordin II OS=Momordica balsamina OX=3672 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.0e-85
Identity = 171/280 (61.07%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL+DL +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLDLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

[Close]

BLAST of Carg04936 vs. Swiss-Prot
Match: sp|P24817|RIP3_MOMCH (Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN=MAP30 PE=1 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-84
Identity = 170/280 (60.71%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

[Close]

BLAST of Carg04936 vs. Swiss-Prot
Match: sp|P09989|RIPT_TRIKI (Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 3.2e-79
Identity = 169/279 (60.57%), Postives = 204/279 (73.12%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           MI+ L LS L L +FL T  VE +V F LS ATSSSY  FI NLR+ALP + K+YDIP+L
Sbjct: 1   MIRFLVLSLLILTLFLTTPAVEGDVSFRLSGATSSSYGVFISNLRKALPNERKLYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPA-QAPKLLFK 120
            S++  S+R+ LI L NY  ++I+ AIDV NVYI+ Y  G  SYFF +  A +A K +FK
Sbjct: 61  RSSLPGSQRYALIHLTNYADETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVFK 120

Query: 121 GTQQR-TLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQT 180
              ++ TLPY+GNYE LQTAA K+RENI LGLPALDSAITTLF+YNA +AASAL+VLIQ+
Sbjct: 121 DAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQS 180

Query: 181 TSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILID 240
           TSEAAR+++IE QI   V   F PS  IISLEN+WSALSKQIQIA   NGQFE+PV+LI+
Sbjct: 181 TSEAARYKFIEQQIGKRVDKTFLPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLIN 240

Query: 241 PQGNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVD 278
            Q  RV ITNV + VVT NI LLLN     + MAA D D
Sbjct: 241 AQNQRVTITNVDAGVVTSNIALLLN----RNNMAAMDDD 275

[Close]

BLAST of Carg04936 vs. Swiss-Prot
Match: sp|P24478|RIPS_TRIKI (Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-78
Identity = 167/279 (59.86%), Postives = 202/279 (72.40%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           MI+ L  S L L +FL    VE +V F LS ATSSSY  FI NLR+ALP + K+YDIP+L
Sbjct: 1   MIRFLVFSLLILTLFLTAPAVEGDVSFRLSGATSSSYGVFISNLRKALPYERKLYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPA-QAPKLLFK 120
            ST+  S+R+ LI L NY  ++I+ AIDV NVY++ Y  G  SYFF +  A +A K +FK
Sbjct: 61  RSTLPGSQRYALIHLTNYADETISVAIDVTNVYVMGYRAGDTSYFFNEASATEAAKYVFK 120

Query: 121 GTQQR-TLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQT 180
             +++ TLPY+GNYE LQ AA K+RENI LGLPALDSAITTLF+YNA +AASAL+VLIQ+
Sbjct: 121 DAKRKVTLPYSGNYERLQIAAGKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQS 180

Query: 181 TSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILID 240
           TSEAAR+++IE QI   V   F PS  IISLEN+WSALSKQIQIA   NGQFETPV+LI+
Sbjct: 181 TSEAARYKFIEQQIGKRVDKTFLPSLAIISLENSWSALSKQIQIASTNNGQFETPVVLIN 240

Query: 241 PQGNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVD 278
            Q  RV ITNV + VVT NI LLLN     + MAA D D
Sbjct: 241 AQNQRVTITNVDAGVVTSNIALLLN----RNNMAAIDDD 275

[Close]

BLAST of Carg04936 vs. TrEMBL
Match: tr|D0VWS7|D0VWS7_CUCMO (rRNA N-glycosidase OS=Cucurbita moschata OX=3662 PE=1 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 3.4e-126
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 263
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 264 IGAT 268
           IGAT
Sbjct: 241 IGAT 244

[Close]

BLAST of Carg04936 vs. TrEMBL
Match: tr|W0LQW1|W0LQW1_MOMCH (rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.7e-83
Identity = 171/280 (61.07%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI+N R  LP   KVYDIP+L
Sbjct: 1   MVKCLVLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIENFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVARYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

[Close]

BLAST of Carg04936 vs. TrEMBL
Match: tr|Q5PZ05|Q5PZ05_MOMCH (rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.3e-82
Identity = 170/280 (60.71%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

[Close]

BLAST of Carg04936 vs. TrEMBL
Match: tr|S6CNY4|S6CNY4_MOMCH (Ribosome inactivating protein (Fragment) OS=Momordica charantia OX=3673 GN=rip PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 168/274 (61.31%), Postives = 209/274 (76.28%), Query Frame = 0


Query: 7   LSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMD 66
           LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L ST+ D
Sbjct: 1   LSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLLYSTISD 60

Query: 67  SRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTL 126
           SRRFIL+DL +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKGT++ TL
Sbjct: 61  SRRFILLDLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKGTRKITL 120

Query: 127 PYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFR 186
           PYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+EAARF+
Sbjct: 121 PYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTAEAARFK 180

Query: 187 YIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQI 246
           YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI+P G R Q+
Sbjct: 181 YIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIEPTGERFQV 240

Query: 247 TNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 TNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 272

[Close]

BLAST of Carg04936 vs. TrEMBL
Match: tr|Q0ZBB8|Q0ZBB8_MOMCH (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=MAP30 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 165/267 (61.80%), Postives = 206/267 (77.15%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSR FIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRHFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGAT 268
           G R Q+TNV S+VV  NIKLLLN  A+
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS 267

The following BLAST results are available for this feature:

BLAST of Carg04936 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959960.1	6.1e-159	97.43	ribosome-inactivating protein cucurmosin [Cucurbita moschata]	[more]
XP_023005049.1	2.0e-157	95.81	ribosome-inactivating protein cucurmosin [Cucurbita maxima]	[more]
3BWH_A	5.2e-126	99.18	Chain A, Atomic Resolution Structure Of Cucurmosin, A Novel Type 1 Rip From The ...	[more]
P84531.2	5.2e-126	99.18	RecName: Full=Ribosome-inactivating protein cucurmosin; AltName: Full=rRNA N-gly...	[more]
ABY47624.1	7.7e-122	99.15	ribosome-inactivating protein, partial [Cucurbita moschata]	[more]

BLAST of Carg04936 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg04936 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P84531\|RIP_CUCMO	1.7e-128	99.18	Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata OX=3662 PE=1 SV=2	[more]
sp\|P29339\|RIP2_MOMBA	3.0e-85	61.07	Ribosome-inactivating protein momordin II OS=Momordica balsamina OX=3672 PE=3 SV...	[more]
sp\|P24817\|RIP3_MOMCH	1.1e-84	60.71	Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN...	[more]
sp\|P09989\|RIPT_TRIKI	3.2e-79	60.57	Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=...	[more]
sp\|P24478\|RIPS_TRIKI	4.7e-78	59.86	Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=...	[more]

BLAST of Carg04936 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|D0VWS7\|D0VWS7_CUCMO	3.4e-126	99.18	rRNA N-glycosidase OS=Cucurbita moschata OX=3662 PE=1 SV=1	[more]
tr\|W0LQW1\|W0LQW1_MOMCH	4.7e-83	61.07	rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=2 SV=1	[more]
tr\|Q5PZ05\|Q5PZ05_MOMCH	2.3e-82	60.71	rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=3 SV=1	[more]
tr\|S6CNY4\|S6CNY4_MOMCH	1.2e-81	61.31	Ribosome inactivating protein (Fragment) OS=Momordica charantia OX=3673 GN=rip P...	[more]
tr\|Q0ZBB8\|Q0ZBB8_MOMCH	1.2e-81	61.80	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=MAP30 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0017148	negative regulation of translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0030598	rRNA N-glycosylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036041	Ribosome-inact_prot_sf
IPR017988	Ribosome_inactivat_prot_CS
IPR001574	Ribosome_inactivat_prot
IPR016138	Ribosome_inactivat_prot_sub1
IPR016139	Ribosome_inactivat_prot_sub2
IPR017989	Ribosome_inactivat_1/2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0030598	rRNA N-glycosylase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04936-RA	Carg04936-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017989	Ribosome-inactivating protein type 1/2	PRINTS	PR00396	SHIGARICIN	coord: 82..97 score: 50.99 coord: 172..192 score: 66.67 coord: 204..221 score: 51.75 coord: 35..48 score: 44.55 coord: 143..157 score: 57.02
IPR016139	Ribosome-inactivating protein, subdomain 2	GENE3D	G3DSA:4.10.470.10		coord: 184..268 e-value: 3.4E-30 score: 105.9
IPR016138	Ribosome-inactivating protein, subdomain 1	GENE3D	G3DSA:3.40.420.10		coord: 23..183 e-value: 5.7E-54 score: 184.1
IPR001574	Ribosome-inactivating protein	PFAM	PF00161	RIP	coord: 33..221 e-value: 8.2E-38 score: 129.9
None	No IPR available	PANTHER	PTHR33453	FAMILY NOT NAMED	coord: 27..226
IPR017988	Ribosome-inactivating protein conserved site	PROSITE	PS00275	SHIGA_RICIN	coord: 176..192
IPR036041	Ribosome-inactivating protein superfamily	SUPERFAMILY	SSF56371	Ribosome inactivating proteins (RIP)	coord: 25..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04936	Csa6G040650	Cucumber (Chinese Long) v2	carcuB0092
Carg04936	ClCG08G004120	Watermelon (Charleston Gray)	carwcgB0086
Carg04936	CSPI06G03390	Wild cucumber (PI 183967)	carcpiB0096
Carg04936	CmaCh17G005680	Cucurbita maxima (Rimu)	carcmaB0109
Carg04936	CmoCh17G005500	Cucurbita moschata (Rifu)	carcmoB0117
Carg04936	CmoCh08G001130	Cucurbita moschata (Rifu)	carcmoB0119
Carg04936	Cp4.1LG12g04830	Cucurbita pepo (Zucchini)	carcpeB0120
Carg04936	Cp4.1LG17g10070	Cucurbita pepo (Zucchini)	carcpeB0125
Carg04936	CsGy6G003380	Cucumber (Gy14) v2	carcgybB0092
Carg04936	CsaV3_6G003670	Cucumber (Chinese Long) v3	carcucB0099
Carg04936	Cla97C08G147410	Watermelon (97103) v2	carwmbB0081
Carg04936	Bhi04G001651	Wax gourd	carwgoB0094

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04936	Carg22635	Silver-seed gourd	carcarB093

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04936	Cucurbita maxima (Rimu)	carcmaB0108
Carg04936	Cucurbita maxima (Rimu)	carcmaB0112
Carg04936	Cucurbita moschata (Rifu)	carcmoB0116
Carg04936	Cucurbita pepo (Zucchini)	carcpeB0119
Carg04936	Wild cucumber (PI 183967)	carcpiB0097
Carg04936	Cucumber (Chinese Long) v2	carcuB0093
Carg04936	Cucumber (Chinese Long) v3	carcucB0100
Carg04936	Bottle gourd (USVL1VR-Ls)	carlsiB070
Carg04936	Melon (DHL92) v3.5.1	carmeB0080
Carg04936	Melon (DHL92) v3.6.1	carmedB0081
Carg04936	Watermelon (Charleston Gray)	carwcgB0083
Carg04936	Watermelon (97103) v1	carwmB0082
Carg04936	Watermelon (97103) v2	carwmbB0078