Carg04541 (gene) Silver-seed gourd

Overview
NameCarg04541
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTransmembrane 70, mitochondrial
LocationCucurbita_argyrosperma_scaffold_032 : 980473 .. 983404 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATACTGGATACTTGTTGTAGGATTAAGTTGGGCTTGATGGGCCATATTGGGCCGAGTGGCCCATTATAGATTGTAAGAAAAACCGCGAGATTACATCTTGTAGCTTCGAAGTAGACACCAGCAAGGGAAGAGGTTTTTGCTTCCGCAGAATGACGAGGGCGGCTCTCTTCCAGTTGCTACGATCACAATCCAAGCATCTCTCGCAAAGAAATCTCCATTCAGGTATCGTTCTCTTTTCCTCTTCCATTTTTCAATCCCTCACTGAAAATTAGGAGATTTGTTCTTTCTCGAGTTTGCAGTTCTGTAATTTTCATGCTTTCAGTGTAGTAAAGAATGTAAAGATTTCGTGCTTGCGTCCATTTAATACGTTCAGAATGGATGATTTTTGCTCTTTTGTTTTCGGAAACGATTCCAAATTTGGATTAGACGATCCTTTAATGAAATTATATGCCCTGAAACTTGCTTGCGTATCTTCTAAGATGAGGGATCTTGAATAAGCTCATCTTAGATCTCGGATTTGAGATAAATTTTAGTTGAAGAATTCTGTATGCTCGGAGTTGGACCTTTGGCTGCACTCTTGTTTGCCTTTCCTACCGCTAGGAATCACTATCACCAACATTTCTGTGTTCACTTGTTGGATATTGAATCTGGCGATTCTTGCTAAACTAGGTTTTTGTTTGTATTTTTTCTTATAAAGAAAATCAATATGTGAAGGTGTGATGTTCGAACATTTGATCTCTTGGCGGAGTGTATATATGTTTTAACGGGTTGAAGTATGCTCGAGTTGGTATTTGTACAAGTCTTTTTAATTTAATATTTACATAAAAGTATGTGTAATAGCCCAAGCCCAATGCTAGCAGTTTTTAAAACGATTCTGCTTGGGGGAGGTTTCCACACCCTTATAAAGAATGATTTGTTCTCTTCTCCAACCGACGTGGGATCTCACAGTATGTATTTGGTCTAATTTGGTTGAAAGACTTGCTTTGTCCTGACTAGCTAGCTTGTTTGGTTCCATCCTTTCGACGTGATGGTCTTGCATCGCGTTCTCGGGTTCACCTTAGTGTCGCCCGGGAACTTTCCTTTTGTGCACCTAATGCCCTGAAGAATTAAGTGAAACAACAAGTTAGAAAAGATAAAAGCAGTAGCAAATAGTTAAAAGAATGCAAAATTTATTCGAGTGTTTCTGGTTTATTAACTCAACTTTCTTTCGATACTCAGTTCTTTCATTTGTTCTTGAAAAGAGAAATTAAAATAAATTCAGCACTAAAAATATGCTTACTGGGTTTGGTGCAAGATTTTCATTGGAAAACTCCTATGAAGATTACCTCTGTTTGAAGGAGGAGGTAGAATTGACCTTATTCGAGCGGATTTTCTCTGATTTCCTTATCTATTCATTATTTAGAATTTAGAATCAATTGATGAGCTCTAATCTACTGTAAGAGGTAAAAGAGATGGGTTTTGCCACTTGCACTAAAGTTCGGTTTCCCTTTCGGAGGCTTCGAATTAGTTACCTTTAGAGGAGAAATCACGCTTATCTTTTAAATATAAGTCGACCTGTAGATTTCATCTTGAAAAGGAAACTTTTGGAGGAGATTTATTGTTGCCAAATATGACATCGCTTATGTCGAAACTTTATTTTTGCCACTTATTTTTTCTCCTCTTCCTCGTTTATGTGACTCTTTCTTGAGGGTATCTTGACGATCCTTTTCTAACGACAACCGAATACCTTCACAAACTCTTGGAAGAGTTTCCGTAACCTGCAATTTAATATTGGGATGTTTCACGAAATTTTCGTTAAAATAATGATGGTTTTTTGAACTCAACTTATAAGCAGCCTATCGATGTCTAGAATGAGGTGAGGCGAGGTAGGTGAAAACAATTCTCCGAGGTCGATATTATCTTCTCTGTGGGTTCGTAGTCTATTAACTTTGCTTGTTGTCTGTTTCAATCTACAGCAGTAACTGCACAGGAATTGTTGTTGATATCTATCCTTTAACAGTCCATCTCTTATTTATTAATTATGTTGGATTTGCTTCACTTGCCTGTTCTGGTTCAAGGTTCTTGACATGATACCAAAACAAGAAAATTTAGAATCTATAACAGAGCTTTATCACCCTCATTAGTAGGTTTTCTTTTGCATCAGGTTATCATCTTCAAAGTTCATCTGCGTTGATCGATAAAACTTGTGGACGCACGAGCAGCTTTGTTTTGCGTCTGAGTGCAGTTCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAGGATGAAAGCAAGATCAGTATTGGACCACGCAGAGGACAAGAAGGTGAGGAAGATGAAAAGGATGTTGCTTATGTCGGACCAATCTCATCGACCATCAAGAAAGTTAAGCTTCTATCTCTATCTACATGCTGCCTCTCCGTGTCGCTTGGCCCGGTCATAACCTTCATGACATCCCCTGACATGAATGTCATCCTGAAAGGTGCTGTTGCTTCATCTGTGATATTCTTCAGCGCTACCACCACCGGGGTGCTTCACTGGTTCGTGAGCCCTTACGTTCATAAAATTAGATGGAAACCAGGTTCAGACAGTTTCGAGGTCGAGATTTTGTCGTGGCTGGCAACGTACATTACTCGAACAATCCGATTTGCAGATATTCGACCACCCAAAACCAATCGTCCTTTTGTGACATTCAAGGCTAATGGGAGCTTCTACTTTGTAGACCAAGAGCACTGCCAGAACAAGGCGTTGTTGGCCAGACTGACTCCTCAGCAACAGGAGTCGGCTTTTAAAAACTTGTAATTGCGTGAGAGATTTTTCTTTTCTTTTTTCACTGAGTTGAACGCCAATGAGATGGCTGAACTGATGTCATAAATTTGCTCCAAACAATTGAGTTTTAGAACACAATTTATTTGCGTATTCGATAAAAGTAGAGTTTTCTAAAGCAATG

mRNA sequence

TTTATACTGGATACTTGTTGTAGGATTAAGTTGGGCTTGATGGGCCATATTGGGCCGAGTGGCCCATTATAGATTGTAAGAAAAACCGCGAGATTACATCTTGTAGCTTCGAAGTAGACACCAGCAAGGGAAGAGGTTTTTGCTTCCGCAGAATGACGAGGGCGGCTCTCTTCCAGTTGCTACGATCACAATCCAAGCATCTCTCGCAAAGAAATCTCCATTCAGGTTATCATCTTCAAAGTTCATCTGCGTTGATCGATAAAACTTGTGGACGCACGAGCAGCTTTGTTTTGCGTCTGAGTGCAGTTCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAGGATGAAAGCAAGATCAGTATTGGACCACGCAGAGGACAAGAAGGTGAGGAAGATGAAAAGGATGTTGCTTATGTCGGACCAATCTCATCGACCATCAAGAAAGTTAAGCTTCTATCTCTATCTACATGCTGCCTCTCCGTGTCGCTTGGCCCGGTCATAACCTTCATGACATCCCCTGACATGAATGTCATCCTGAAAGGTGCTGTTGCTTCATCTGTGATATTCTTCAGCGCTACCACCACCGGGGTGCTTCACTGGTTCGTGAGCCCTTACGTTCATAAAATTAGATGGAAACCAGGTTCAGACAGTTTCGAGGTCGAGATTTTGTCGTGGCTGGCAACGTACATTACTCGAACAATCCGATTTGCAGATATTCGACCACCCAAAACCAATCGTCCTTTTGTGACATTCAAGGCTAATGGGAGCTTCTACTTTGTAGACCAAGAGCACTGCCAGAACAAGGCGTTGTTGGCCAGACTGACTCCTCAGCAACAGGAGTCGGCTTTTAAAAACTTGTAATTGCGTGAGAGATTTTTCTTTTCTTTTTTCACTGAGTTGAACGCCAATGAGATGGCTGAACTGATGTCATAAATTTGCTCCAAACAATTGAGTTTTAGAACACAATTTATTTGCGTATTCGATAAAAGTAGAGTTTTCTAAAGCAATG

Coding sequence (CDS)

ATGACGAGGGCGGCTCTCTTCCAGTTGCTACGATCACAATCCAAGCATCTCTCGCAAAGAAATCTCCATTCAGGTTATCATCTTCAAAGTTCATCTGCGTTGATCGATAAAACTTGTGGACGCACGAGCAGCTTTGTTTTGCGTCTGAGTGCAGTTCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAGGATGAAAGCAAGATCAGTATTGGACCACGCAGAGGACAAGAAGGTGAGGAAGATGAAAAGGATGTTGCTTATGTCGGACCAATCTCATCGACCATCAAGAAAGTTAAGCTTCTATCTCTATCTACATGCTGCCTCTCCGTGTCGCTTGGCCCGGTCATAACCTTCATGACATCCCCTGACATGAATGTCATCCTGAAAGGTGCTGTTGCTTCATCTGTGATATTCTTCAGCGCTACCACCACCGGGGTGCTTCACTGGTTCGTGAGCCCTTACGTTCATAAAATTAGATGGAAACCAGGTTCAGACAGTTTCGAGGTCGAGATTTTGTCGTGGCTGGCAACGTACATTACTCGAACAATCCGATTTGCAGATATTCGACCACCCAAAACCAATCGTCCTTTTGTGACATTCAAGGCTAATGGGAGCTTCTACTTTGTAGACCAAGAGCACTGCCAGAACAAGGCGTTGTTGGCCAGACTGACTCCTCAGCAACAGGAGTCGGCTTTTAAAAACTTGTAA

Protein sequence

MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQATTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYITRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL
Homology
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BLAST of Carg04541 vs. NCBI nr
Match: XP_022990452.1 (uncharacterized protein LOC111487306 [Cucurbita maxima])

HSP 1 Score: 453.8 bits (1166), Expect = 3.7e-124
Identity = 231/236 (97.88%), Postives = 233/236 (98.73%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFV RLSAVQKRWASQA
Sbjct: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTREDESKISIGPRRGQE EEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDESKISIGPRRGQEAEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYI 180
           TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEI+SWLATYI
Sbjct: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180

Query: 181 TRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
            RTIRFADIRPP+TNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 236

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BLAST of Carg04541 vs. NCBI nr
Match: XP_022964861.1 (uncharacterized protein LOC111464841 isoform X1 [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 4.8e-124
Identity = 230/236 (97.46%), Postives = 233/236 (98.73%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSA IDKTCGRTSSFV RLSAVQKRWASQA
Sbjct: 23  MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSAWIDKTCGRTSSFVSRLSAVQKRWASQA 82

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTREDESKISIGPRRGQEGEEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 83  TTREDESKISIGPRRGQEGEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 142

Query: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYI 180
           TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEI+SWLATYI
Sbjct: 143 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 202

Query: 181 TRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
            RTIRFADIRPP+TNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL
Sbjct: 203 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 258

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BLAST of Carg04541 vs. NCBI nr
Match: XP_022964869.1 (uncharacterized protein LOC111464841 isoform X2 [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 4.8e-124
Identity = 230/236 (97.46%), Postives = 233/236 (98.73%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSA IDKTCGRTSSFV RLSAVQKRWASQA
Sbjct: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSAWIDKTCGRTSSFVSRLSAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTREDESKISIGPRRGQEGEEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDESKISIGPRRGQEGEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYI 180
           TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEI+SWLATYI
Sbjct: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180

Query: 181 TRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
            RTIRFADIRPP+TNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 236

[Close]
BLAST of Carg04541 vs. NCBI nr
Match: XP_023546346.1 (uncharacterized protein LOC111805469 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.2 bits (1162), Expect = 1.1e-123
Identity = 230/236 (97.46%), Postives = 234/236 (99.15%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           MTRAALFQLLRSQSK+LSQRNLHSGYHLQSSSALIDKTCGRTSSFV RLSAVQKRWASQA
Sbjct: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYI 180
           TSPDMNVILKGAVAS+VIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEI+SWLATYI
Sbjct: 121 TSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180

Query: 181 TRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
            RTIRFADIRPP+TNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 236

[Close]
BLAST of Carg04541 vs. NCBI nr
Match: XP_004143808.1 (PREDICTED: uncharacterized protein LOC101213359 [Cucumis sativus] >KGN51224.1 hypothetical protein Csa_5G495170 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 1.8e-107
Identity = 200/236 (84.75%), Postives = 218/236 (92.37%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           MTRAALF LLRSQSKH+S+RN +SGYHLQ S+A I++    TS+F+ + +AVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTRED+ KISIGP RGQE EEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYI 180
           TSPDMNVILKG VASSVIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE++SWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 181 TRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
            RTIRFADIRPP+TNRPFVTFKANGSFYFVD+EHCQNKALLARLTPQQ+ESA +NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 236

[Close]
BLAST of Carg04541 vs. TAIR10
Match: AT2G35790.1 (unknown protein)

HSP 1 Score: 274.2 bits (700), Expect = 7.3e-74
Identity = 150/241 (62.24%), Postives = 183/241 (75.93%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWAS-Q 60
           M R+AL  LLRSQS+ LS     SGYH +S +     +      F +  S  Q+ WAS  
Sbjct: 1   MGRSALIHLLRSQSRRLSSSTFTSGYHHRSIAGSWSSSVNPKVRFQVP-SLSQRSWASFG 60

Query: 61  ATTRE--DESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVI 120
           A TRE  DE KISIGP+  ++ EE +  V Y GPISSTIKKVKLLSLSTCCLSVSLGPVI
Sbjct: 61  AKTREDDDEHKISIGPQ--EKKEEKDGGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLA 180
           TFMTSP +NVI+KGAVAS+VIF SA+TT  LHWFVSPYVHK+RW+PGSD+FEVE+++WL 
Sbjct: 121 TFMTSPGLNVIMKGAVASTVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMTWLG 180

Query: 181 TYITRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKN 237
           T+  +T++F+DIR P T RP+V+FKA+G+FYFVD +HC NKALLARLTP +   +SAFKN
Sbjct: 181 TFSAKTLKFSDIRYPDTQRPYVSFKADGNFYFVDADHCPNKALLARLTPPKDAHDSAFKN 238

[Close]
BLAST of Carg04541 vs. TrEMBL
Match: tr|A0A0A0KQP8|A0A0A0KQP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G495170 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-107
Identity = 200/236 (84.75%), Postives = 218/236 (92.37%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           MTRAALF LLRSQSKH+S+RN +SGYHLQ S+A I++    TS+F+ + +AVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTRED+ KISIGP RGQE EEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYI 180
           TSPDMNVILKG VASSVIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE++SWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 181 TRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
            RTIRFADIRPP+TNRPFVTFKANGSFYFVD+EHCQNKALLARLTPQQ+ESA +NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 236

[Close]
BLAST of Carg04541 vs. TrEMBL
Match: tr|A0A1S3CPD9|A0A1S3CPD9_CUCME (uncharacterized protein LOC103503301 OS=Cucumis melo OX=3656 GN=LOC103503301 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 2.1e-104
Identity = 196/236 (83.05%), Postives = 215/236 (91.10%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           MTRAALF LLRSQSKH+S+RN +SGYHLQ S+A I++    TS+F+ + +AVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
            TRED+ KISIGP RG   EEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  PTREDDGKISIGPERG--SEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLATYI 180
           TSPDMNVILKG VASSVIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE++SWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 181 TRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
            RTIRFADIRPP+TNRPFVTFKANG+FYFVD+EHC NKALLARLTPQQ+ESAF+NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGNFYFVDKEHCHNKALLARLTPQQRESAFRNL 234

[Close]
BLAST of Carg04541 vs. TrEMBL
Match: tr|A0A061FNU7|A0A061FNU7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_043093 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.2e-92
Identity = 180/240 (75.00%), Postives = 203/240 (84.58%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVLRLSAVQKRWASQA 60
           M RAALF LLRSQSK L  RN+HSGY  + ++    +      +    +  VQKRW+SQA
Sbjct: 1   MARAALFHLLRSQSKQLISRNIHSGYPCRLATWSYTQYAKPNINSATSIFTVQKRWSSQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120
           TT E+++KISIGPR+G+E EEDEKD  V Y GPISSTIKKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  TTTENDNKISIGPRKGREEEEDEKDRGVVYNGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILSWLAT 180
           FMTSPDMNVILKGAVASSVIFFSATTT VLHWFVSPY+HKIRW+PGSDSFEVE++SWLAT
Sbjct: 121 FMTSPDMNVILKGAVASSVIFFSATTTAVLHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 181 YITRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKNL 237
           YI RTI+FADIRPP+TNRPFVTFKANG+FYFVD+EHC NKALLARLTPQ+   +SA KNL
Sbjct: 181 YIPRTIKFADIRPPETNRPFVTFKANGNFYFVDEEHCHNKALLARLTPQKATHDSALKNL 240

[Close]
BLAST of Carg04541 vs. TrEMBL
Match: tr|A0A2I4G0F3|A0A2I4G0F3_9ROSI (uncharacterized protein LOC109003614 isoform X2 OS=Juglans regia OX=51240 GN=LOC109003614 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.0e-90
Identity = 178/242 (73.55%), Postives = 200/242 (82.64%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNL--HSGYHLQSSSALIDKTCGRT--SSFVLRLSAVQKRW 60
           M   AL +LLRSQSK LS RN    SGYH   S A   +   +   +   L  +A Q+RW
Sbjct: 1   MAITALLRLLRSQSKQLSSRNYFPSSGYHPSGSGAWAHRLNAKPNFNPAFLPAAAAQRRW 60

Query: 61  ASQATTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLG 120
           AS ATT ED+SKISIGPRRG+E  +D+KD  V Y GPISST+KKVKLLSLSTCCLSVSLG
Sbjct: 61  ASPATTNEDDSKISIGPRRGEEAGKDDKDTGVVYYGPISSTVKKVKLLSLSTCCLSVSLG 120

Query: 121 PVITFMTSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILS 180
           PVITFMTSPDMNVILKGAVASSVIF SATTT  LHWFVSPYVHK+RW+PGSDSFEVE++S
Sbjct: 121 PVITFMTSPDMNVILKGAVASSVIFLSATTTAALHWFVSPYVHKLRWQPGSDSFEVEMMS 180

Query: 181 WLATYITRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFK 237
           WLATY+ RTI+FADIRPP+TNRPFVTFKANGSFYFVD+EHC NKALLARL+PQ++ESAFK
Sbjct: 181 WLATYVPRTIKFADIRPPETNRPFVTFKANGSFYFVDEEHCHNKALLARLSPQKRESAFK 240

[Close]
BLAST of Carg04541 vs. TrEMBL
Match: tr|A0A2I4G0F0|A0A2I4G0F0_9ROSI (uncharacterized protein LOC109003614 isoform X1 OS=Juglans regia OX=51240 GN=LOC109003614 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.7e-90
Identity = 177/242 (73.14%), Postives = 200/242 (82.64%), Query Frame = 0 

Query: 1   MTRAALFQLLRSQSKHLSQRNL--HSGYHLQSSSALIDKTCGRT--SSFVLRLSAVQKRW 60
           M   AL +LLRSQSK LS R+    SGYH   S A   +   +   +   L  +A Q+RW
Sbjct: 1   MASTALLRLLRSQSKRLSSRSYFPSSGYHPSGSGAWAHRLNAKPNFNPAFLPAAAAQRRW 60

Query: 61  ASQATTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLG 120
           AS ATT ED+SKISIGPRRG+E  +D+KD  V Y GPISST+KKVKLLSLSTCCLSVSLG
Sbjct: 61  ASPATTNEDDSKISIGPRRGEEAGKDDKDTGVVYYGPISSTVKKVKLLSLSTCCLSVSLG 120

Query: 121 PVITFMTSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEILS 180
           PVITFMTSPDMNVILKGAVASSVIF SATTT  LHWFVSPYVHK+RW+PGSDSFEVE++S
Sbjct: 121 PVITFMTSPDMNVILKGAVASSVIFLSATTTAALHWFVSPYVHKLRWQPGSDSFEVEMMS 180

Query: 181 WLATYITRTIRFADIRPPKTNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFK 237
           WLATY+ RTI+FADIRPP+TNRPFVTFKANGSFYFVD+EHC NKALLARL+PQ++ESAFK
Sbjct: 181 WLATYVPRTIKFADIRPPETNRPFVTFKANGSFYFVDEEHCHNKALLARLSPQKRESAFK 240

The following BLAST results are available for this feature:
BLAST of Carg04541 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022990452.13.7e-12497.88uncharacterized protein LOC111487306 [Cucurbita maxima][more]
XP_022964861.14.8e-12497.46uncharacterized protein LOC111464841 isoform X1 [Cucurbita moschata][more]
XP_022964869.14.8e-12497.46uncharacterized protein LOC111464841 isoform X2 [Cucurbita moschata][more]
XP_023546346.11.1e-12397.46uncharacterized protein LOC111805469 [Cucurbita pepo subsp. pepo][more]
XP_004143808.11.8e-10784.75PREDICTED: uncharacterized protein LOC101213359 [Cucumis sativus] >KGN51224.1 hy... [more]
BLAST of Carg04541 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35790.17.3e-7462.24unknown protein[more]
BLAST of Carg04541 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg04541 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KQP8|A0A0A0KQP8_CUCSA1.2e-10784.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G495170 PE=4 SV=1[more]
tr|A0A1S3CPD9|A0A1S3CPD9_CUCME2.1e-10483.05uncharacterized protein LOC103503301 OS=Cucumis melo OX=3656 GN=LOC103503301 PE=... [more]
tr|A0A061FNU7|A0A061FNU7_THECC3.2e-9275.00Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_043093 PE=4 SV=1[more]
tr|A0A2I4G0F3|A0A2I4G0F3_9ROSI3.0e-9073.55uncharacterized protein LOC109003614 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4G0F0|A0A2I4G0F0_9ROSI6.7e-9073.14uncharacterized protein LOC109003614 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009724TMEM70
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04541-RACarg04541-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009724TMEM70 familyPFAMPF06979TMEM70coord: 99..224
e-value: 1.3E-27
score: 96.6
IPR009724TMEM70 familyPANTHERPTHR13281UNCHARACTERIZEDcoord: 48..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg04541Cla004732Watermelon (97103) v1carwmB0679
Carg04541MELO3C002879Melon (DHL92) v3.5.1carmeB0682
Carg04541ClCG09G020510Watermelon (Charleston Gray)carwcgB0657
Carg04541CSPI05G16880Wild cucumber (PI 183967)carcpiB0721
Carg04541Cucsa.275660Cucumber (Gy14) v1carcgyB0768
Carg04541CmaCh04G025960Cucurbita maxima (Rimu)carcmaB0967
Carg04541CmoCh04G027170Cucurbita moschata (Rifu)carcmoB0940
Carg04541Lsi02G017050Bottle gourd (USVL1VR-Ls)carlsiB623
Carg04541Cp4.1LG01g24250Cucurbita pepo (Zucchini)carcpeB0965
Carg04541CsGy5G016610Cucumber (Gy14) v2carcgybB0685
Carg04541MELO3C002879.2Melon (DHL92) v3.6.1carmedB0694
Carg04541CsaV3_5G025890Cucumber (Chinese Long) v3carcucB0724
Carg04541Cla97C09G181930Watermelon (97103) v2carwmbB0714
Carg04541Bhi06G000574Wax gourdcarwgoB0803
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg04541Wax gourdcarwgoB0809
Carg04541Silver-seed gourdcarcarB306
Carg04541Silver-seed gourdcarcarB578
Carg04541Cucumber (Gy14) v2carcgybB0687
Carg04541Cucumber (Gy14) v1carcgyB0769
Carg04541Cucurbita maxima (Rimu)carcmaB0961
Carg04541Cucurbita maxima (Rimu)carcmaB0964
Carg04541Cucurbita maxima (Rimu)carcmaB0965
Carg04541Cucurbita maxima (Rimu)carcmaB0966
Carg04541Cucurbita maxima (Rimu)carcmaB0968
Carg04541Cucurbita moschata (Rifu)carcmoB0938
Carg04541Cucurbita moschata (Rifu)carcmoB0936
Carg04541Cucurbita moschata (Rifu)carcmoB0939
Carg04541Cucurbita moschata (Rifu)carcmoB0941
Carg04541Cucurbita pepo (Zucchini)carcpeB0958
Carg04541Cucurbita pepo (Zucchini)carcpeB0959
Carg04541Cucurbita pepo (Zucchini)carcpeB0962
Carg04541Cucurbita pepo (Zucchini)carcpeB0963
Carg04541Cucurbita pepo (Zucchini)carcpeB0966
Carg04541Wild cucumber (PI 183967)carcpiB0723
Carg04541Cucumber (Chinese Long) v2carcuB0707
Carg04541Cucumber (Chinese Long) v2carcuB0709
Carg04541Cucumber (Chinese Long) v3carcucB0726
Carg04541Bottle gourd (USVL1VR-Ls)carlsiB622
Carg04541Bottle gourd (USVL1VR-Ls)carlsiB627
Carg04541Melon (DHL92) v3.5.1carmeB0684
Carg04541Melon (DHL92) v3.6.1carmedB0696
Carg04541Watermelon (Charleston Gray)carwcgB0661
Carg04541Watermelon (97103) v1carwmB0683