Cp4.1LG01g24250 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g24250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTransmembrane 70, mitochondrial
LocationCp4.1LG01 : 19134274 .. 19139066 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAATATTCAAATATTCTTTTTTAAATCAATTTTCATCCAAAACTAATGTAAAAAAACTCTTCTAGATAACATCTTATTGTTTTTATATCATCGAGATAATTTAGAGTTATAAATCAATTTGAGTGTAAAATATCTAAAATGCTCTCAGATGAAATACTATAATTTATACAAAAATATAAGAAATAAAATAATAATTACAAAAATGTAAAGAAGGGAAACCAAGCTAAACACCACGAATCGGAAAAGCCAAGCAGCCAGGACTCACTCACGCACGAGCTATACAACTAGAAGCCGCCTTAGCCAACACTCTAACCAGAACCGACCTATACCTGAGAGCCCTAATCAGGCTCCATGGACTCATTTCTCCGCCGGTACCGTCGGCGGCAACAGTTGCCGCCGCCTCCCCCGGAACCACGCGGAACATCGGCGCCGGTGCCAGCCGAGCCTGTCTCCTCCGAATCTCGCTCAGTTCTGTTCTCGACGGAGTTCTCGTTAATCCAATCAACGCCATCGGCCTCCTCAAACTACTCCGCTGATATCCGAAACCACCGATTACAGGCGATGAAAACGATTTCGACCGAAAGCTCTGGTTTCGCATAAACAACTCCGAGTTACTTCGGAAACTCCGCCCTTCCGCATCAGAATCTTTATCTCGGAGAGATAGAGATCCAGCGTCCAATATCTTCCCGCAGAAAACGATTTCACTAGGCGGCGATGAGGAACTTGTTCTCTGCTTCAAATCGGTGCAGAATTCAAACAGATCGTGGTAGGACGGAGAGCGACATGGCGTATCCACATCATCTGGTTCGTGAATTGGAAAATCGCGGAGAGAGAGATCGTCTGCATCGTCGTCGATCAGATCCAAAACTTCCAAATTGTTCTCCACAGACGCCATTGAAATGCAAAATTCTTTCTGCTGCGAAAATTACAGTGAAATGAAAGATGAGATGAGGTTAGAGTTGCTGGAGATGCATTAAATAAAGGGAGAAATAGGAAGGAGGAGGATGCTTCCTCTTGGAGGTTGGATTTGATCCGCCATGGTTTTTAATTAATTTTGTTCTTCCACAGATGAATTTTGAACTAAACCGTGTTGCCAAGTACCCTAAACGAAGACCTTCTAGAAACGGAGGTAAGAGAGTTTCTAAATAAATAAATAAATAATACTAGGTGCATTCTATTAAAAAAAAAAAAAAATTATGCTAAATTATATATATATATATATATATATATATAATTTTTTTCTTCTAGAAACTATATTTAATATTTTTAATTTATGAGTATTAATAAAATTACAACTATATATATATATATATACATACATATATATATATATACATACATATATATATATATATATATATAATATTGTCAATGTCTTGCAATTTTTAACAATTACGTAGTGATCTTCTAGAATTCATTATTTATACTTTATTTTGTAATGATAAACACTTTTCTTTTATATATGCCTGTGATTATTATTATTTAATTAAATGTTATTTTAGTTGACTTATTTTTAAATTTTATTTAAATTTTTGTAATTTTAATATTTAAATTTAATGATTTCATTTTCAAAAAAAATTGATATTGGATTCTAGTTAAAGTTTTCAAAATTTTATTTTAATGTAAATTATTTTATATTTTATAAATTTTAGGTTGTGTTGCAAAATATTATTATTATTTTTATTATATATCTAATTTTGTTAAAATTAAAATTAAATAAAAGTACACATCAAGTATACCTATTAAAGTTGAATAAAATTTAAAATAAAAGGAGGAGAATGATAATTTAATATTATTATTATTTTTTAATTTTGGGTTTATAAATTTATCCAAATTGAAACAAATATTTTATATAGCCTTATAAATTAACGATGATTTACTAATTTTTTTAAAATAAAAAATTAAAATTCTACTGGATACTTGTTGTAGGATTAAATTGGGCTTGACTGGGCCATATTGGGCCGAGTGGCCCATTATAGATTGTAAGAAAAACCGCGAGATTACATCTTGTAGCTTCGAAGCAGACACCAGTAAGGGAAGAGGTTTTTGCTCCTGCAGAATGACGAGGGCGGCTCTCTTTCAGTTGCTACGATCACAATCCAAGAATCTCTCGCAGAGAAATCTCCATTCAGGTATCGTTTTCCTTTCCTCTTCCATTTTTCAATCCCTCTCTGAAAATTAGGAGATTTGTTCTTTCTCGAGTTTGTAATTCGGTAGTTTTCATGGTTTCAGTGTAGTAAAGAATGTAAAGATTTCGTGCTTGCGTCCATTTAATACGTTCAGAATGGATGATTTTTGCTCTTTTGTTTTCGGAAATGATTTCAAATTTGGATTAGACGATCCATTAATGAAATTATATGCCCTGAAACTTGCTTGCGTATCTTCTAAGATGAGGGATCTTGAATAAGCTCATCTTAGATCTCGGATTTGAGATAAATTTTAGCTGAAGAATTATGTATGCTGGGAGTTTGCCTTTTCTACCGCTAGGAATCACTATCACCAACAGTTCTGTGTTCACTTGTTGGATATAGAATCTGGGGATTCTTGCGAAACTAGGTTTTTGTTTGTTTTTTTGTTTTTATAAAGAAAATCGTTGGATGTTCGAACATTTGATCTCTTGGCAGAGTGCATGTATGTTTTAATAGTTGAAGTATGCTCGAGCTGGTATTTGTACAAGTCTTTAATTTAATATCTACATGAAAGCCCACAGCTAGCCCATTCTAAAATGCTTATGCTAGGGGAGGTTTCGACACCCTTATAAGGAATGATTCGTTCATCGCAGTATGTATTTGGTCTAATCTGGTTGAAAGACTTGCTTGTCATGACTAGCTAGCTTGTTTGGTTCCATCCTTTCGACGTGATGGTCTTGCATCGCGTTCTCGGGTTCACCTTAGTGTTGCCCGGGAACTTTCCTTTTGTGCACCTAATGCCCTGAAGAATTAAGTGATACAACAAGTTAGAAAAGATAAAAGAAGTAAGCAAATAGTTAAAAGAATGCAAAATTTATTCGAGTATTTCTGGTGGTTTATTAACTCAACTTTCTTTAGATACTCAGTTCTTTCATTTGTTCTTGAAAAGAGAAATTAAAAGAAATTCAGCACTAAAAATATTCTTACTGGGTTTGGTGCAAGATTTTCATTGGAAAACTCGTATGAAGATTACCTCTGTTTGAAGGAGGAGGTAGAATCGACCTTATTCGAGCGGATTTTCTCCGATTTCCTTGTCTATTCATTATTAGAATTTTAGAATCAATTGATGAGCTCTAATCTACTGTAAGAGCTAAAAGAGAAGGGGGTTTGCCACTTGTGCAAAAGTTCGGTTTTCCTTTCGGAAGCTTCGAATTAGTTACCTTTACAGGAGAAGTCGCTCTCATCTTTTGAATATAAGTCGATCTGTAGATTTCATCTTGGAAAGGGAACTTTCAGAGGAAATTTATTGTTGCTAAATATGACATCGCTTATGGCGAAACTTCATTTTTGTCACTTATTTTTTCTCCTCTTCCTCGTTTATGTGGCCCTCTTACTTGAGGGTAACTTGACGATCCTTTTCTAACGACAACCGAATATCTTCACAAACTCTTGGAAGAGTTTCCGTAATCTTCAATTTAATATTGAGATGTTTCACGAAATTTTCGTTAAAATAATGATGGTTTTCGAACTCAACTTATAAGCAGCCTATCGATGTCTAGAATGAGGTGAGACGAGGTAGGTGAAAACAATTCTCCGAGGTCGATATTATCTTCTCTGTAGGTTCGTAGTCTATTAACTTCGCTTGTTGTCTGTTTCAATCTACAGCAGTAACTGCACAGGAATTCTTGTTGATATCTATCCTTTAACAGTCCATCTCTTATTTATTAATTATGTTGGATTTGCTTCACTTACCTGTTCTGGTTCTAGGTTCTTGACATGATACCAAAACAAGAAAATTTAGAATCTATAACAGAGCTTTATCACCCTCATTAGTAAGTTTTCTTTTGCATCAGGTTATCATCTTCAAAGTTCATCTGCGTTGATCGATAAAACTTGTGGACGCACGAGCAGCTTTGTTTCGCGTCTGAGTGCAGTTCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAGGATGAAAGCAAGATCAGCATTGGACCACGCAGAGGACAAGAAGGCGAGGAAGATGAAAAGGATGTTGCTTATGTCGGACCAATCTCGTCGACCATCAAGAAAGTTAAGCTTCTATCTCTATCTACATGCTGCCTCTCCGTGTCGCTTGGCCCGGTCATAACCTTCATGACATCCCCTGACATGAATGTCATCCTGAAAGGTGCTGTTGCTTCAACTGTAATATTCTTCAGCGCTACCACCACCGGGGTGCTTCACTGGTTCGTGAGCCCTTACGTTCATAAAATTAGATGGAAACCAGGTTCAGACAGTTTCGAGGTCGAGATTATGTCGTGGCTGGCAACGTACATTCCTCGAACAATCCGGTTTGCAGATATTCGACCACCCGAAACCAATCGTCCTTTTGTGACATTCAAGGCTAATGGGAGCTTCTACTTTGTAGACCAAGAGCACTGCCAGAACAAGGCATTGTTGGCCAGACTGACTCCTCAGCAACAGGAGTCGGCTTTTAAAAACTTGTAATTGCGTGAGAGATTTTTCTTTTCTTTTTTCACTGAGTTGAACGCCAATGAGATGGCTGAACTGATGTCATAAATTTGCTCCAAACAATTGAGTTTTAGAACACAATTTATTTGCGTATTCGATAAAAGTAGAGTTTTCTAAAGCAATGATTTTAAGTAGAAAAATTAAA

mRNA sequence

AAAAAAATATTCAAATATTCTTTTTTAAATCAATTTTCATCCAAAACTAATGTAAAAAAACTCTTCTAGATAACATCTTATTGTTTTTATATCATCGAGATAATTTAGAGTTATAAATCAATTTGAGTGTAAAATATCTAAAATGCTCTCAGATGAAATACTATAATTTATACAAAAATATAAGAAATAAAATAATAATTACAAAAATGTAAAGAAGGGAAACCAAGCTAAACACCACGAATCGGAAAAGCCAAGCAGCCAGGACTCACTCACGCACGAGCTATACAACTAGAAGCCGCCTTAGCCAACACTCTAACCAGAACCGACCTATACCTGAGAGCCCTAATCAGGCTCCATGGACTCATTTCTCCGCCGGTACCGTCGGCGGCAACAGTTGCCGCCGCCTCCCCCGGAACCACGCGGAACATCGGCGCCGGTGCCAGCCGAGCCTGTCTCCTCCGAATCTCGCTCAGTTCTGTTCTCGACGGAGTTCTCGTTAATCCAATCAACGCCATCGGCCTCCTCAAACTACTCCGCTGATATCCGAAACCACCGATTACAGGCGATGAAAACGATTTCGACCGAAAGCTCTGGTTTCGCATAAACAACTCCGAGTTACTTCGGAAACTCCGCCCTTCCGCATCAGAATCTTTATCTCGGAGAGATAGAGATCCAGCGTCCAATATCTTCCCGCAGAAAACGATTTCACTAGGCGGCGATGAGGAACTTGTTCTCTGCTTCAAATCGGTGCAGAATTCAAACAGATCGTGGTAGGACGGAGAGCGACATGGCGTATCCACATCATCTGGTTCGTGAATTGGAAAATCGCGGAGAGAGAGATCGTCTGCATCGTCGTCGATCAGATCCAAAACTTCCAAATTGTTCTCCACAGACGCCATTGAAATGCAAAATTCTTTCTGCTGCGAAAATTACAGTGAAATGAAAGATGAGATGAGGTTAGAGTTGCTGGAGATGCATTAAATAAAGGGAGAAATAGGAAGGAGGAGGATGCTTCCTCTTGGAGGTTGGATTTGATCCGCCATGGTTTTTAATTAATTTTGTTCTTCCACAGATGAATTTTGAACTAAACCGTGTTGCCAAGTACCCTAAACGAAGACCTTCTAGAAACGGAGGATTAAATTGGGCTTGACTGGGCCATATTGGGCCGAGTGGCCCATTATAGATTGTAAGAAAAACCGCGAGATTACATCTTGTAGCTTCGAAGCAGACACCAGTAAGGGAAGAGGTTTTTGCTCCTGCAGAATGACGAGGGCGGCTCTCTTTCAGTTGCTACGATCACAATCCAAGAATCTCTCGCAGAGAAATCTCCATTCAGGTTATCATCTTCAAAGTTCATCTGCGTTGATCGATAAAACTTGTGGACGCACGAGCAGCTTTGTTTCGCGTCTGAGTGCAGTTCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAGGATGAAAGCAAGATCAGCATTGGACCACGCAGAGGACAAGAAGGCGAGGAAGATGAAAAGGATGTTGCTTATGTCGGACCAATCTCGTCGACCATCAAGAAAGTTAAGCTTCTATCTCTATCTACATGCTGCCTCTCCGTGTCGCTTGGCCCGGTCATAACCTTCATGACATCCCCTGACATGAATGTCATCCTGAAAGGTGCTGTTGCTTCAACTGTAATATTCTTCAGCGCTACCACCACCGGGGTGCTTCACTGGTTCGTGAGCCCTTACGTTCATAAAATTAGATGGAAACCAGGTTCAGACAGTTTCGAGGTCGAGATTATGTCGTGGCTGGCAACGTACATTCCTCGAACAATCCGGTTTGCAGATATTCGACCACCCGAAACCAATCGTCCTTTTGTGACATTCAAGGCTAATGGGAGCTTCTACTTTGTAGACCAAGAGCACTGCCAGAACAAGGCATTGTTGGCCAGACTGACTCCTCAGCAACAGGAGTCGGCTTTTAAAAACTTGTAATTGCGTGAGAGATTTTTCTTTTCTTTTTTCACTGAGTTGAACGCCAATGAGATGGCTGAACTGATGTCATAAATTTGCTCCAAACAATTGAGTTTTAGAACACAATTTATTTGCGTATTCGATAAAAGTAGAGTTTTCTAAAGCAATGATTTTAAGTAGAAAAATTAAA

Coding sequence (CDS)

ATGACGAGGGCGGCTCTCTTTCAGTTGCTACGATCACAATCCAAGAATCTCTCGCAGAGAAATCTCCATTCAGGTTATCATCTTCAAAGTTCATCTGCGTTGATCGATAAAACTTGTGGACGCACGAGCAGCTTTGTTTCGCGTCTGAGTGCAGTTCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAGGATGAAAGCAAGATCAGCATTGGACCACGCAGAGGACAAGAAGGCGAGGAAGATGAAAAGGATGTTGCTTATGTCGGACCAATCTCGTCGACCATCAAGAAAGTTAAGCTTCTATCTCTATCTACATGCTGCCTCTCCGTGTCGCTTGGCCCGGTCATAACCTTCATGACATCCCCTGACATGAATGTCATCCTGAAAGGTGCTGTTGCTTCAACTGTAATATTCTTCAGCGCTACCACCACCGGGGTGCTTCACTGGTTCGTGAGCCCTTACGTTCATAAAATTAGATGGAAACCAGGTTCAGACAGTTTCGAGGTCGAGATTATGTCGTGGCTGGCAACGTACATTCCTCGAACAATCCGGTTTGCAGATATTCGACCACCCGAAACCAATCGTCCTTTTGTGACATTCAAGGCTAATGGGAGCTTCTACTTTGTAGACCAAGAGCACTGCCAGAACAAGGCATTGTTGGCCAGACTGACTCCTCAGCAACAGGAGTCGGCTTTTAAAAACTTGTAA

Protein sequence

MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQATTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL
Homology
[Close]
BLAST of Cp4.1LG01g24250 vs. TrEMBL
Match: A0A0A0KQP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495170 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 7.8e-109
Identity = 202/236 (85.59%), Postives = 220/236 (93.22%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           MTRAALF LLRSQSK++S+RN +SGYHLQ S+A I++    TS+F+S+ +AVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTRED+ KISIGP RGQE EEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180
           TSPDMNVILKG VAS+VIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE+MSWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
           PRTIRFADIRPPETNRPFVTFKANGSFYFVD+EHCQNKALLARLTPQQ+ESA +NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 236

[Close]
BLAST of Cp4.1LG01g24250 vs. TrEMBL
Match: A0A061FNU7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043093 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 9.2e-94
Identity = 182/240 (75.83%), Postives = 205/240 (85.42%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           M RAALF LLRSQSK L  RN+HSGY  + ++    +      +  + +  VQKRW+SQA
Sbjct: 1   MARAALFHLLRSQSKQLISRNIHSGYPCRLATWSYTQYAKPNINSATSIFTVQKRWSSQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120
           TT E+++KISIGPR+G+E EEDEKD  V Y GPISSTIKKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  TTTENDNKISIGPRKGREEEEDEKDRGVVYNGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLAT 180
           FMTSPDMNVILKGAVAS+VIFFSATTT VLHWFVSPY+HKIRW+PGSDSFEVE+MSWLAT
Sbjct: 121 FMTSPDMNVILKGAVASSVIFFSATTTAVLHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 181 YIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKNL 237
           YIPRTI+FADIRPPETNRPFVTFKANG+FYFVD+EHC NKALLARLTPQ+   +SA KNL
Sbjct: 181 YIPRTIKFADIRPPETNRPFVTFKANGNFYFVDEEHCHNKALLARLTPQKATHDSALKNL 240

[Close]
BLAST of Cp4.1LG01g24250 vs. TrEMBL
Match: A0A0B0MH90_GOSAR (Transmembrane 70, mitochondrial OS=Gossypium arboreum GN=F383_21700 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.3e-91
Identity = 177/240 (73.75%), Postives = 199/240 (82.92%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           M R ALF LLRSQSK L  RN+HSGY  + ++    +      ++ + + +VQKRWASQA
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRFRFATLSGTQYAKPNLNYATSIFSVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120
            T ED  KISIGPR+ +E +EDEKD  V Y GPISSTIKKVK+LSLSTCCLSVSLGPVIT
Sbjct: 61  KTTEDGDKISIGPRKSKEDDEDEKDAGVVYYGPISSTIKKVKMLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLAT 180
           FMTSPDMNVI+KGAVAS+VIFFSATTT  LHWFVSPY+HKIRW+PGSDSFEVE+MSWLAT
Sbjct: 121 FMTSPDMNVIVKGAVASSVIFFSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 181 YIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKNL 237
           YIPRTI+FADIRP ETNRPFVTFKANG+FYFVD EHC NKALLARLTPQ+   ESA KNL
Sbjct: 181 YIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKNL 240

[Close]
BLAST of Cp4.1LG01g24250 vs. TrEMBL
Match: A0A0D2RB28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G204700 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.6e-90
Identity = 175/240 (72.92%), Postives = 200/240 (83.33%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           M R ALF LLRSQSK L  RN+HSGY  + ++    +      ++ + + +VQKRWASQA
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRCRFATLSGTQYAKPNLNYATSIFSVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120
            T ED++KISIGPR+ +E +E+EKD  V Y GPISSTIKKVK+LSLSTCCLSVSLGPVIT
Sbjct: 61  KTTEDDNKISIGPRKSKEDDENEKDAGVVYHGPISSTIKKVKMLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLAT 180
           FMTSPDMNVI+KGAVAS+VIF SATTT  LHWFVSPY+HKIRW+PGSDSFEVE+MSWLAT
Sbjct: 121 FMTSPDMNVIVKGAVASSVIFLSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 181 YIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKNL 237
           YIPRTI+FADIRP ETNRPFVTFKANG+FYFVD EHC NKALLARLTPQ+   ESA KNL
Sbjct: 181 YIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKNL 240

[Close]
BLAST of Cp4.1LG01g24250 vs. TrEMBL
Match: M5X0G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010662mg PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.3e-89
Identity = 181/243 (74.49%), Postives = 200/243 (82.30%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSAL---IDKTCGRTSSFVSRLSAVQKRWA 60
           MTRAALF LLRSQSK L+  NL SGY    S A    ++   G  S F   ++A QKRWA
Sbjct: 1   MTRAALFHLLRSQSKQLASSNLLSGYQPCRSGAWALGLNTKSGFNSGF--DINASQKRWA 60

Query: 61  SQATTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGP 120
           S ATT+ED+ KISIGPRRG E  ED KD  V Y GPISSTIKKVKLLSLSTCCLSVSLGP
Sbjct: 61  SHATTKEDDGKISIGPRRGGEVGEDGKDSGVVYYGPISSTIKKVKLLSLSTCCLSVSLGP 120

Query: 121 VITFMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSW 180
           VITFMTSP MNVILKGAVAS+VIF SA+TT  LHWFV+PY+HK+RWKPGSDSFEVE++SW
Sbjct: 121 VITFMTSPGMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWKPGSDSFEVEMLSW 180

Query: 181 LATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAF 237
           LATYIPRTI+F+DIRP ETNRPFVTFKANG+FYFVD +HC NKALLARLTPQ+  QESAF
Sbjct: 181 LATYIPRTIKFSDIRPAETNRPFVTFKANGNFYFVDPDHCHNKALLARLTPQKATQESAF 240

[Close]
BLAST of Cp4.1LG01g24250 vs. TAIR10
Match: AT2G35790.1 (AT2G35790.1 unknown protein)

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-74
Identity = 154/242 (63.64%), Postives = 185/242 (76.45%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSF-VSRLSAVQKRWAS- 60
           M R+AL  LLRSQS+ LS     SGYH +S +     +      F V  LS  Q+ WAS 
Sbjct: 1   MGRSALIHLLRSQSRRLSSSTFTSGYHHRSIAGSWSSSVNPKVRFQVPSLS--QRSWASF 60

Query: 61  QATTRED--ESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPV 120
            A TRED  E KISIGP+  ++ EE +  V Y GPISSTIKKVKLLSLSTCCLSVSLGPV
Sbjct: 61  GAKTREDDDEHKISIGPQ--EKKEEKDGGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPV 120

Query: 121 ITFMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWL 180
           ITFMTSP +NVI+KGAVASTVIF SA+TT  LHWFVSPYVHK+RW+PGSD+FEVE+M+WL
Sbjct: 121 ITFMTSPGLNVIMKGAVASTVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMTWL 180

Query: 181 ATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFK 237
            T+  +T++F+DIR P+T RP+V+FKA+G+FYFVD +HC NKALLARLTP +   +SAFK
Sbjct: 181 GTFSAKTLKFSDIRYPDTQRPYVSFKADGNFYFVDADHCPNKALLARLTPPKDAHDSAFK 238

[Close]
BLAST of Cp4.1LG01g24250 vs. NCBI nr
Match: gi|449452120|ref|XP_004143808.1| (PREDICTED: uncharacterized protein LOC101213359 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-108
Identity = 202/236 (85.59%), Postives = 220/236 (93.22%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           MTRAALF LLRSQSK++S+RN +SGYHLQ S+A I++    TS+F+S+ +AVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
           TTRED+ KISIGP RGQE EEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180
           TSPDMNVILKG VAS+VIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE+MSWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
           PRTIRFADIRPPETNRPFVTFKANGSFYFVD+EHCQNKALLARLTPQQ+ESA +NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 236

[Close]
BLAST of Cp4.1LG01g24250 vs. NCBI nr
Match: gi|659131388|ref|XP_008465660.1| (PREDICTED: uncharacterized protein LOC103503301 [Cucumis melo])

HSP 1 Score: 390.6 bits (1002), Expect = 2.0e-105
Identity = 198/236 (83.90%), Postives = 217/236 (91.95%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           MTRAALF LLRSQSK++S+RN +SGYHLQ S+A I++    TS+F+S+ +AVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120
            TRED+ KISIGP RG E  EDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  PTREDDGKISIGPERGSE--EDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 121 TSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180
           TSPDMNVILKG VAS+VIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE+MSWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 237
           PRTIRFADIRPPETNRPFVTFKANG+FYFVD+EHC NKALLARLTPQQ+ESAF+NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGNFYFVDKEHCHNKALLARLTPQQRESAFRNL 234

[Close]
BLAST of Cp4.1LG01g24250 vs. NCBI nr
Match: gi|590564782|ref|XP_007009763.1| (Uncharacterized protein TCM_043093 [Theobroma cacao])

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-93
Identity = 182/240 (75.83%), Postives = 205/240 (85.42%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           M RAALF LLRSQSK L  RN+HSGY  + ++    +      +  + +  VQKRW+SQA
Sbjct: 1   MARAALFHLLRSQSKQLISRNIHSGYPCRLATWSYTQYAKPNINSATSIFTVQKRWSSQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120
           TT E+++KISIGPR+G+E EEDEKD  V Y GPISSTIKKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  TTTENDNKISIGPRKGREEEEDEKDRGVVYNGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLAT 180
           FMTSPDMNVILKGAVAS+VIFFSATTT VLHWFVSPY+HKIRW+PGSDSFEVE+MSWLAT
Sbjct: 121 FMTSPDMNVILKGAVASSVIFFSATTTAVLHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 181 YIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKNL 237
           YIPRTI+FADIRPPETNRPFVTFKANG+FYFVD+EHC NKALLARLTPQ+   +SA KNL
Sbjct: 181 YIPRTIKFADIRPPETNRPFVTFKANGNFYFVDEEHCHNKALLARLTPQKATHDSALKNL 240

[Close]
BLAST of Cp4.1LG01g24250 vs. NCBI nr
Match: gi|728814413|gb|KHG01533.1| (Transmembrane 70, mitochondrial [Gossypium arboreum])

HSP 1 Score: 342.8 bits (878), Expect = 4.7e-91
Identity = 177/240 (73.75%), Postives = 199/240 (82.92%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           M R ALF LLRSQSK L  RN+HSGY  + ++    +      ++ + + +VQKRWASQA
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRFRFATLSGTQYAKPNLNYATSIFSVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120
            T ED  KISIGPR+ +E +EDEKD  V Y GPISSTIKKVK+LSLSTCCLSVSLGPVIT
Sbjct: 61  KTTEDGDKISIGPRKSKEDDEDEKDAGVVYYGPISSTIKKVKMLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLAT 180
           FMTSPDMNVI+KGAVAS+VIFFSATTT  LHWFVSPY+HKIRW+PGSDSFEVE+MSWLAT
Sbjct: 121 FMTSPDMNVIVKGAVASSVIFFSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 181 YIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKNL 237
           YIPRTI+FADIRP ETNRPFVTFKANG+FYFVD EHC NKALLARLTPQ+   ESA KNL
Sbjct: 181 YIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKNL 240

[Close]
BLAST of Cp4.1LG01g24250 vs. NCBI nr
Match: gi|823238486|ref|XP_012451896.1| (PREDICTED: uncharacterized protein LOC105774098 [Gossypium raimondii])

HSP 1 Score: 339.3 bits (869), Expect = 5.2e-90
Identity = 175/240 (72.92%), Postives = 200/240 (83.33%), Query Frame = 1 

Query: 1   MTRAALFQLLRSQSKNLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60
           M R ALF LLRSQSK L  RN+HSGY  + ++    +      ++ + + +VQKRWASQA
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRCRFATLSGTQYAKPNLNYATSIFSVQKRWASQA 60

Query: 61  TTREDESKISIGPRRGQEGEEDEKD--VAYVGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120
            T ED++KISIGPR+ +E +E+EKD  V Y GPISSTIKKVK+LSLSTCCLSVSLGPVIT
Sbjct: 61  KTTEDDNKISIGPRKSKEDDENEKDAGVVYHGPISSTIKKVKMLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPDMNVILKGAVASTVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLAT 180
           FMTSPDMNVI+KGAVAS+VIF SATTT  LHWFVSPY+HKIRW+PGSDSFEVE+MSWLAT
Sbjct: 121 FMTSPDMNVIVKGAVASSVIFLSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 181 YIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ--QESAFKNL 237
           YIPRTI+FADIRP ETNRPFVTFKANG+FYFVD EHC NKALLARLTPQ+   ESA KNL
Sbjct: 181 YIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKNL 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g24250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g24250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQP8_CUCSA7.8e-10985.59Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495170 PE=4 SV=1[more]
A0A061FNU7_THECC9.2e-9475.83Uncharacterized protein OS=Theobroma cacao GN=TCM_043093 PE=4 SV=1[more]
A0A0B0MH90_GOSAR3.3e-9173.75Transmembrane 70, mitochondrial OS=Gossypium arboreum GN=F383_21700 PE=4 SV=1[more]
A0A0D2RB28_GOSRA3.6e-9072.92Uncharacterized protein OS=Gossypium raimondii GN=B456_010G204700 PE=4 SV=1[more]
M5X0G2_PRUPE5.3e-8974.49Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010662mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g24250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35790.11.9e-7463.64 unknown protein[more]
BLAST of Cp4.1LG01g24250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449452120|ref|XP_004143808.1|1.1e-10885.59PREDICTED: uncharacterized protein LOC101213359 [Cucumis sativus][more]
gi|659131388|ref|XP_008465660.1|2.0e-10583.90PREDICTED: uncharacterized protein LOC103503301 [Cucumis melo][more]
gi|590564782|ref|XP_007009763.1|1.3e-9375.83Uncharacterized protein TCM_043093 [Theobroma cacao][more]
gi|728814413|gb|KHG01533.1|4.7e-9173.75Transmembrane 70, mitochondrial [Gossypium arboreum][more]
gi|823238486|ref|XP_012451896.1|5.2e-9072.92PREDICTED: uncharacterized protein LOC105774098 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009724TMEM70
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g24250.1Cp4.1LG01g24250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009724TMEM70 familyPANTHERPTHR13281UNCHARACTERIZEDcoord: 44..226
score: 1.4
IPR009724TMEM70 familyPFAMPF06979TMEM70coord: 99..224
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g24250Cucsa.275660Cucumber (Gy14) v1cgycpeB0725
Cp4.1LG01g24250CmaCh04G025960Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g24250CmoCh04G027170Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g24250MELO3C002879.2Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g24250CsGy5G016610Cucumber (Gy14) v2cgybcpeB627
Cp4.1LG01g24250Carg04541Silver-seed gourdcarcpeB0965
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g24250Cucurbita pepo (Zucchini)cpecpeB038
Cp4.1LG01g24250Cucurbita pepo (Zucchini)cpecpeB075
Cp4.1LG01g24250Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g24250Cucurbita pepo (Zucchini)cpecpeB379
Cp4.1LG01g24250Cucurbita pepo (Zucchini)cpecpeB384
Cp4.1LG01g24250Cucurbita pepo (Zucchini)cpecpeB407
Cp4.1LG01g24250Cucumber (Gy14) v1cgycpeB0807
Cp4.1LG01g24250Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g24250Cucurbita maxima (Rimu)cmacpeB435
Cp4.1LG01g24250Cucurbita maxima (Rimu)cmacpeB663
Cp4.1LG01g24250Cucurbita maxima (Rimu)cmacpeB734
Cp4.1LG01g24250Cucurbita maxima (Rimu)cmacpeB877
Cp4.1LG01g24250Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g24250Cucurbita moschata (Rifu)cmocpeB401
Cp4.1LG01g24250Cucurbita moschata (Rifu)cmocpeB687
Cp4.1LG01g24250Cucurbita moschata (Rifu)cmocpeB814
Cp4.1LG01g24250Wild cucumber (PI 183967)cpecpiB416
Cp4.1LG01g24250Wild cucumber (PI 183967)cpecpiB425
Cp4.1LG01g24250Cucumber (Chinese Long) v2cpecuB427
Cp4.1LG01g24250Cucumber (Chinese Long) v2cpecuB417
Cp4.1LG01g24250Bottle gourd (USVL1VR-Ls)cpelsiB324
Cp4.1LG01g24250Bottle gourd (USVL1VR-Ls)cpelsiB336
Cp4.1LG01g24250Bottle gourd (USVL1VR-Ls)cpelsiB365
Cp4.1LG01g24250Watermelon (Charleston Gray)cpewcgB344
Cp4.1LG01g24250Watermelon (Charleston Gray)cpewcgB386
Cp4.1LG01g24250Watermelon (Charleston Gray)cpewcgB398
Cp4.1LG01g24250Watermelon (97103) v1cpewmB381
Cp4.1LG01g24250Watermelon (97103) v1cpewmB438
Cp4.1LG01g24250Watermelon (97103) v1cpewmB450
Cp4.1LG01g24250Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g24250Melon (DHL92) v3.5.1cpemeB385
Cp4.1LG01g24250Cucumber (Gy14) v2cgybcpeB635
Cp4.1LG01g24250Melon (DHL92) v3.6.1cpemedB446
Cp4.1LG01g24250Silver-seed gourdcarcpeB0374
Cp4.1LG01g24250Silver-seed gourdcarcpeB0679
Cp4.1LG01g24250Cucumber (Chinese Long) v3cpecucB0519
Cp4.1LG01g24250Cucumber (Chinese Long) v3cpecucB0527
Cp4.1LG01g24250Wax gourdcpewgoB0499
Cp4.1LG01g24250Wax gourdcpewgoB0560