CsaV3_5G025890 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G025890
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Transmembrane 70, mitochondrial
Location	chr5 : 21077335 .. 21081585 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAATTACAAAAACCATGTTGCAGCTTCGAAGTACAGCAAGGGAAGAGTTTTTGCTTCTGGAGAATGACGAGGGCCGCTCTCTTCCATTTGCTACGATCACAATCCAAACATATCTCGAGAAGAAATTACTATTCAGGTATGTTTCTTCTTCCTTCTTCCATTTTCCAATCCCTCCTTGCAAGAATGAGACATTTTTCTTTCTCAAGCTTTCAATTCTGCAATTTTCATGCTCCCAGTGTAGTAAAGAATGTTAAATTTCTTGTTTGCTTCCGATGAATGCGATTAGAAAATATTAACGTTAGCCTTTAATGTTCTGAAATTATCTCAAAATTATTTTACAAGACCTCTTCGTGAAGTTTTATGCCATATGATAGCTTGTCTAGCTAGGGATCTTGTCTTGAATAATCTCATTTTGATTTTAGGTTTGAGATAAATTTTACCGGAAGAATTATGCATGCTTTGAGTTGGAACTTTGGGTGCATTTTGCTTCTCTTTTTTTTTCTACACCTAGCTACTGTCACGAACATTTCAATGTTCACTTGTTGCACATGAATTTAGGGATTCTTGCAAAACTAGGTTTTATTTCATATTTCGTATGTGTTACTCCTCTCCTTGCTAATTAGCTTTGAGGTAGAACTCCATGTATATCTAATGTGGTATTAGAATCTATGATATCCGAAAAAACATTCTTTGTAAATAAATTGAAATCTGACTCAAGAATGGTGAGCCCAAAGAGGCATTATGTTGAGGGGCATGTGGAGAGGAGATGTCATAATCTTTATAGAACACACAAGTTACTTCTCTTATTGTCAATTGGCTTTGAGCTGGAATTATGTTTGTATGTGTTCTCTTAAAGTAATATTTACACTGAAAGTACGCATTTGGCTCATCTCCTTGTAAGACATCCCTTTTATCTCTATAGCTGCCTTGTTTCCTTGTTTCCCACTTCCAATATTGTAGTCTAGCATCGTTGTTTGGTGGGTTCATCTAAGTATCACTATGGAAATTTTCTTTTTTGCATATAACACCCTTATAAGTTAAAAAAGATTAAGCAACATCTAGTAAGTAAACAAATAAAACAATGCAAATGAAATTCTTGATTGAAATCAAGTAAATTCACAAAAATGTTGAGCAAAAAGCTAGAAAATTTTCAATTCTTTTAACGAGACCAAAAATTTACTGGTAGAAAAGCACTGGAAAGCATACAATATCAAGTTTTAGCAAATATAATGAAAGGAAATTGCTGCCCTCTAGGATTGGATGTCAGAATTTACTATAGTATTTCTGGTTGTTAACTATATTTAGATACTCAGTTTGTTATGTGATAGGGTGCTAGCCACTCAGGTATTCAGGGTTGGGAGGCTTCCATCTCTTCTCTGGCAGTTACTGAAGATTCGTTTGTATTTTTTCCCCTGCTTTTCTTCCTTCCCTCACAATAACTTAAAAGACAAGCATAATCTTAGACCAAATATATCCAGGACTAGCAATACTTTAATTTTTAGGTTAAAAAGTACAAATATTAAGCACTAGAAACATGCTAATCGGGCTTGGTGTAAGACTTTCTGTGGGAAATAACTCCCTTTCTATTAATCACTTGCAATTGCTGGATGATGCCATTCTTGTTCTCTTACTTCGTGAAGTCCTCACATTCTCGTTATTATTGTCAAGTCTTTGTAGAGGCTTCGGTCCCTACCATAGGTAAGGTAAATCAGATATTGCTGGCATTGGTTGTGTGACCTCCATCATTAAGCTGATTGCTCTGAACTTCAGCTTAGAATCGGGACACTGGCCATTTCTTACTTAGAGCCTCCTCTGTTTTTTCTTTAGACCTTTTTATTGAAAGATGAGAAAATAAACTCTAATAAAGAAAATGCCTCATTGAAGAAGGCAGGCAACCTTATTTGAATAGATTCTCTCTAATCTTCTTATAATATCTAATAAAGAGAGTAGAGAGCCCAGTGTCAATTGATTTTGAGGTGGAATCTCATGTTATATAATGTCATAAAGCCAAAACGGGTATTTGATCCAATAGCAAATTGAGATCCAATAAAAAATGGTGAACCCAAAAGAGTCACATCATGAGGGATCATGTTGAGAATCCCACATGGAAGAAACCAAGAGAACTGAAACTCCTTATTTTAGGATAGGACCCCTTTGTCAATTGGTTTTGAGATGGAACCTCATTGCTAAGAATTCCACATAGGAAAAACTAAGGTACCTCGCACTCCTTATAAGATAGACGAATTTCTTTCCTATTGTCAATTGGTTTTAAGATGGAATTAACTCTATGCTTGTGGGCTCGAAATATGAAAACTCAACAAGTGGAAATGAATAATAATTGGAGAGAAAACAACAATGTAGAGGTTTGAGAAAAAACAACAATTTAGAGGTTTGAACACAGGATCTTCTGAACCAACCTGCTTTAAACCCCTCTTCAATCAATACCATCTTAAATTATCAATTGACTCAAAGTGGCTTTTTTGGAGATTTATTTGACATGGAGATTTCACCTTGAAAAGGATAATTTTTGGAAGAAATTTGTTGTTGCTAGAACGGCATTGCTAATGATGGAGGAAATGTATTTTGTTTACTTTTAAAATTGTAAATATTTTTACTTCTGGCTCTTGCATACAGTGCATTGCATATGATCCTACCCAACCCTGAGTACCTTTCCTACATGTTGGACGATCTTTCCCATTCTTCCATCATCCATGGGACTTGGTTTTCCTTGTAATTGTTTATTCAATGAAGTTAGTTGTTCAATTGTTTGTTATTGTTTTTTTTATCAGAAAAGCTTTAGTTATTTTGACTTGGAAAGCGAGAGAATTATACAACAGAAATAAGGATGGTCTATTGGTCTCTCTATATTTCCATTAAAAGAAAGAAATGGTTTTAAACTCAACTTATAAGCAGTATATTGATGTCTTTTTGTTCCCTTTTGTGAAGGAGTTAGCAAACAAACTCAAGACGAATCATTATCTGATGTCACTATCCTTCATGAGTCCGTCTTATATTTGTTATTTATTTTGGATTTGCTTCACTCTCAAAGCCCTGGGCCTTGTCTTGTCTTGTTTTCATTATTTTTAAAGATAGTAATAGCTAGGGTTTTTCCTTCCTTATTAACTAAGAAAAATCGAATTTACTCAGCCTAAATGCAAAAGTTCTCTTGTTCAGATTGGTTTTTCTTTTTCATATTTCCACTCCAACTATGCTTTCTCTTCTTTATGTAATATTTTTGTTTGCGCTTTGCAGTTAAGCTCTAGAAGACTAAAGCTCTTTTTATCTAAAAGTAAGTGCTCTTTTGCCTCAGGTTATCATCTCCAACGATCAACAGCATGGATCAATGAAAAATTTGTACCCACCAGCAACTTTCTTTCGCAGAAAAATGCAGTCCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAAGATGATGGCAAGATCAGCATTGGACCCGGAAGAGGACAAGAAGCCGAGGAAGATGAAAAAGATGTTGCTTATATTGGGCCAATCTCGTCAACTATCAAAAAAGTCAAGCTTCTATCTTTATCTACATGCTGCCTCTCTGTATCACTCGGACCAGTCATAACCTTCATGACGTCCCCCGACATGAATGTGATTCTGAAAGGTGTTGTTGCATCATCTGTGATATTCCTCAGTGCTACTACTACTGGAGCGCTTCACTGGTTCGTGAGCCCTTATGTTCATAAAATTAGGTGGAAACCAGGTTCAGACAGTTTTGAGGTTGAGGTTATGTCGTGGCTGGCGACTTACATTCCACGAACCATTAGATTTGCTGATATTCGACCACCCGAAACAAACCGCCCCTTTGTGACATTCAAGGCTAATGGGAGTTTCTACTTCGTAGACAAAGAGCACTGTCAGAATAAGGCACTCTTAGCCAGACTGACTCCTCAGCAACGCGAATCAGCTCTTAGAAACTTATGATTGTCTTGGAGACTGACTTTTCTTTTTCTTCATTGAGTTGAAGGCCAATGAGATGGCTGAACTGTTGTCATAAATCATATACTTTCACCATAGACAAATTGCTGCTCATTGTACTGTTTAGATCAATTTTGGCAGAATGGTTTTTTTAAAACACAATAATTCATTCATGTGTACAACCTTTGATAACTGATAGATGATACTACATAACATATATTACGTAGTTTGGAATTTTAAAAATAGTTTCTATTAACATATTCTTTATATATTTTTGAAAAGATACTCACATAGTATAAC

mRNA sequence

AAAAAAAAAAAATTACAAAAACCATGTTGCAGCTTCGAAGTACAGCAAGGGAAGAGTTTTTGCTTCTGGAGAATGACGAGGGCCGCTCTCTTCCATTTGCTACGATCACAATCCAAACATATCTCGAGAAGAAATTACTATTCAGGTTATCATCTCCAACGATCAACAGCATGGATCAATGAAAAATTTGTACCCACCAGCAACTTTCTTTCGCAGAAAAATGCAGTCCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAAGATGATGGCAAGATCAGCATTGGACCCGGAAGAGGACAAGAAGCCGAGGAAGATGAAAAAGATGTTGCTTATATTGGGCCAATCTCGTCAACTATCAAAAAAGTCAAGCTTCTATCTTTATCTACATGCTGCCTCTCTGTATCACTCGGACCAGTCATAACCTTCATGACGTCCCCCGACATGAATGTGATTCTGAAAGGTGTTGTTGCATCATCTGTGATATTCCTCAGTGCTACTACTACTGGAGCGCTTCACTGGTTCGTGAGCCCTTATGTTCATAAAATTAGGTGGAAACCAGGTTCAGACAGTTTTGAGGTTGAGGTTATGTCGTGGCTGGCGACTTACATTCCACGAACCATTAGATTTGCTGATATTCGACCACCCGAAACAAACCGCCCCTTTGTGACATTCAAGGCTAATGGGAGTTTCTACTTCGTAGACAAAGAGCACTGTCAGAATAAGGCACTCTTAGCCAGACTGACTCCTCAGCAACGCGAATCAGCTCTTAGAAACTTATGA

Coding sequence (CDS)

AAAAAAAAAAAATTACAAAAACCATGTTGCAGCTTCGAAGTACAGCAAGGGAAGAGTTTTTGCTTCTGGAGAATGACGAGGGCCGCTCTCTTCCATTTGCTACGATCACAATCCAAACATATCTCGAGAAGAAATTACTATTCAGGTTATCATCTCCAACGATCAACAGCATGGATCAATGAAAAATTTGTACCCACCAGCAACTTTCTTTCGCAGAAAAATGCAGTCCAGAAGAGATGGGCATCTCAAGCTACAACAAGAGAAGATGATGGCAAGATCAGCATTGGACCCGGAAGAGGACAAGAAGCCGAGGAAGATGAAAAAGATGTTGCTTATATTGGGCCAATCTCGTCAACTATCAAAAAAGTCAAGCTTCTATCTTTATCTACATGCTGCCTCTCTGTATCACTCGGACCAGTCATAACCTTCATGACGTCCCCCGACATGAATGTGATTCTGAAAGGTGTTGTTGCATCATCTGTGATATTCCTCAGTGCTACTACTACTGGAGCGCTTCACTGGTTCGTGAGCCCTTATGTTCATAAAATTAGGTGGAAACCAGGTTCAGACAGTTTTGAGGTTGAGGTTATGTCGTGGCTGGCGACTTACATTCCACGAACCATTAGATTTGCTGATATTCGACCACCCGAAACAAACCGCCCCTTTGTGACATTCAAGGCTAATGGGAGTTTCTACTTCGTAGACAAAGAGCACTGTCAGAATAAGGCACTCTTAGCCAGACTGACTCCTCAGCAACGCGAATCAGCTCTTAGAAACTTATGA

Protein sequence

KKKKLQKPCCSFEVQQGKSFCFWRMTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQATTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL

Homology

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BLAST of CsaV3_5G025890 vs. NCBI nr
Match: XP_004143808.1 (PREDICTED: uncharacterized protein LOC101213359 [Cucumis sativus] >KGN51224.1 hypothetical protein Csa_5G495170 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 1.4e-129
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 84
           MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 85  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 144
           TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 145 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 204
           TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 205 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 261
           PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 236

[Close]

BLAST of CsaV3_5G025890 vs. NCBI nr
Match: XP_008465660.1 (PREDICTED: uncharacterized protein LOC103503301 [Cucumis melo])

HSP 1 Score: 452.2 bits (1162), Expect = 1.2e-123
Identity = 228/236 (96.61%), Postives = 230/236 (97.46%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 84
           MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 85  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 144
            TREDDGKISIGP RG  +EEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  PTREDDGKISIGPERG--SEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 145 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 204
           TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 205 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 261
           PRTIRFADIRPPETNRPFVTFKANG+FYFVDKEHC NKALLARLTPQQRESA RNL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGNFYFVDKEHCHNKALLARLTPQQRESAFRNL 234

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BLAST of CsaV3_5G025890 vs. NCBI nr
Match: XP_022964861.1 (uncharacterized protein LOC111464841 isoform X1 [Cucurbita moschata])

HSP 1 Score: 427.2 bits (1097), Expect = 4.1e-116
Identity = 211/248 (85.08%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 13  EVQQGKSFCFWRMTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQ 72
           +  +G+ FCF RMTRAALF LLRSQSKH+S+RN +SGYHLQ S+AWI++    TS+F+S+
Sbjct: 11  DTSKGRGFCFRRMTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSAWIDKTCGRTSSFVSR 70

Query: 73  KNAVQKRWASQATTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCC 132
            +AVQKRWASQATTRED+ KISIGP RGQE EEDEKDVAYIGPISSTIKKVKLLSLSTCC
Sbjct: 71  LSAVQKRWASQATTREDESKISIGPRRGQEGEEDEKDVAYIGPISSTIKKVKLLSLSTCC 130

Query: 133 LSVSLGPVITFMTSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSF 192
           LSVSLGPVITFMTSPDMNVILKG VASSVIF SATTTG LHWFVSPYVHKIRWKPGSDSF
Sbjct: 131 LSVSLGPVITFMTSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSF 190

Query: 193 EVEVMSWLATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQ 252
           EVE+MSWLATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVD+EHCQNKALLARLTPQQ
Sbjct: 191 EVEIMSWLATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQ 250

Query: 253 RESALRNL 261
           +ESA +NL
Sbjct: 251 QESAFKNL 258

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BLAST of CsaV3_5G025890 vs. NCBI nr
Match: XP_022964869.1 (uncharacterized protein LOC111464841 isoform X2 [Cucurbita moschata])

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 206/236 (87.29%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 84
           MTRAALF LLRSQSKH+S+RN +SGYHLQ S+AWI++    TS+F+S+ +AVQKRWASQA
Sbjct: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSAWIDKTCGRTSSFVSRLSAVQKRWASQA 60

Query: 85  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 144
           TTRED+ KISIGP RGQE EEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDESKISIGPRRGQEGEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 145 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 204
           TSPDMNVILKG VASSVIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE+MSWLATYI
Sbjct: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180

Query: 205 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 261
           PRTIRFADIRPPETNRPFVTFKANGSFYFVD+EHCQNKALLARLTPQQ+ESA +NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 236

[Close]

BLAST of CsaV3_5G025890 vs. NCBI nr
Match: XP_022990452.1 (uncharacterized protein LOC111487306 [Cucurbita maxima])

HSP 1 Score: 410.2 bits (1053), Expect = 5.2e-111
Identity = 205/236 (86.86%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 84
           MTRAALF LLRSQSKH+S+RN +SGYHLQ S+A I++    TS+F+S+ +AVQKRWASQA
Sbjct: 1   MTRAALFQLLRSQSKHLSQRNLHSGYHLQSSSALIDKTCGRTSSFVSRLSAVQKRWASQA 60

Query: 85  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 144
           TTRED+ KISIGP RGQEAEEDEKDVAY+GPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDESKISIGPRRGQEAEEDEKDVAYVGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 145 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 204
           TSPDMNVILKG VASSVIF SATTTG LHWFVSPYVHKIRWKPGSDSFEVE+MSWLATYI
Sbjct: 121 TSPDMNVILKGAVASSVIFFSATTTGVLHWFVSPYVHKIRWKPGSDSFEVEIMSWLATYI 180

Query: 205 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 261
           PRTIRFADIRPPETNRPFVTFKANGSFYFVD+EHCQNKALLARLTPQQ+ESA +NL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDQEHCQNKALLARLTPQQQESAFKNL 236

[Close]

BLAST of CsaV3_5G025890 vs. TAIR10
Match: AT2G35790.1 (unknown protein)

HSP 1 Score: 278.5 bits (711), Expect = 4.3e-75
Identity = 151/241 (62.66%), Postives = 183/241 (75.93%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWAS-Q 84
           M R+AL HLLRSQS+ +S   + SGYH  RS A      V         +  Q+ WAS  
Sbjct: 1   MGRSALIHLLRSQSRRLSSSTFTSGYH-HRSIAGSWSSSVNPKVRFQVPSLSQRSWASFG 60

Query: 85  ATTREDDG--KISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVI 144
           A TREDD   KISIGP   ++ EE +  V Y GPISSTIKKVKLLSLSTCCLSVSLGPVI
Sbjct: 61  AKTREDDDEHKISIGP--QEKKEEKDGGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 145 TFMTSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLA 204
           TFMTSP +NVI+KG VAS+VIFLSA+TT ALHWFVSPYVHK+RW+PGSD+FEVE+M+WL 
Sbjct: 121 TFMTSPGLNVIMKGAVASTVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMTWLG 180

Query: 205 TYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQ--RESALRN 261
           T+  +T++F+DIR P+T RP+V+FKA+G+FYFVD +HC NKALLARLTP +   +SA +N
Sbjct: 181 TFSAKTLKFSDIRYPDTQRPYVSFKADGNFYFVDADHCPNKALLARLTPPKDAHDSAFKN 238

[Close]

BLAST of CsaV3_5G025890 vs. TrEMBL
Match: tr|A0A0A0KQP8|A0A0A0KQP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G495170 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 9.6e-130
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 84
           MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 85  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 144
           TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 145 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 204
           TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 205 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 261
           PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 236

[Close]

BLAST of CsaV3_5G025890 vs. TrEMBL
Match: tr|A0A1S3CPD9|A0A1S3CPD9_CUCME (uncharacterized protein LOC103503301 OS=Cucumis melo OX=3656 GN=LOC103503301 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 7.9e-124
Identity = 228/236 (96.61%), Postives = 230/236 (97.46%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 84
           MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA
Sbjct: 1   MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 60

Query: 85  TTREDDGKISIGPGRGQEAEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 144
            TREDDGKISIGP RG  +EEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM
Sbjct: 61  PTREDDGKISIGPERG--SEEDEKDVAYIGPISSTIKKVKLLSLSTCCLSVSLGPVITFM 120

Query: 145 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 204
           TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI
Sbjct: 121 TSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLATYI 180

Query: 205 PRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQRESALRNL 261
           PRTIRFADIRPPETNRPFVTFKANG+FYFVDKEHC NKALLARLTPQQRESA RNL
Sbjct: 181 PRTIRFADIRPPETNRPFVTFKANGNFYFVDKEHCHNKALLARLTPQQRESAFRNL 234

[Close]

BLAST of CsaV3_5G025890 vs. TrEMBL
Match: tr|A0A2I4G0F3|A0A2I4G0F3_9ROSI (uncharacterized protein LOC109003614 isoform X2 OS=Juglans regia OX=51240 GN=LOC109003614 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 6.5e-94
Identity = 184/249 (73.90%), Postives = 202/249 (81.12%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYY--SGYHLQRSTAW---------INEKFVPTSNFLSQK 84
           M   AL  LLRSQSK +S RNY+  SGYH   S AW          N  F+P +      
Sbjct: 1   MAITALLRLLRSQSKQLSSRNYFPSSGYHPSGSGAWAHRLNAKPNFNPAFLPAA------ 60

Query: 85  NAVQKRWASQATTREDDGKISIGPGRGQEAEEDEKD--VAYIGPISSTIKKVKLLSLSTC 144
            A Q+RWAS ATT EDD KISIGP RG+EA +D+KD  V Y GPISST+KKVKLLSLSTC
Sbjct: 61  -AAQRRWASPATTNEDDSKISIGPRRGEEAGKDDKDTGVVYYGPISSTVKKVKLLSLSTC 120

Query: 145 CLSVSLGPVITFMTSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDS 204
           CLSVSLGPVITFMTSPDMNVILKG VASSVIFLSATTT ALHWFVSPYVHK+RW+PGSDS
Sbjct: 121 CLSVSLGPVITFMTSPDMNVILKGAVASSVIFLSATTTAALHWFVSPYVHKLRWQPGSDS 180

Query: 205 FEVEVMSWLATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQ 261
           FEVE+MSWLATY+PRTI+FADIRPPETNRPFVTFKANGSFYFVD+EHC NKALLARL+PQ
Sbjct: 181 FEVEMMSWLATYVPRTIKFADIRPPETNRPFVTFKANGSFYFVDEEHCHNKALLARLSPQ 240

[Close]

BLAST of CsaV3_5G025890 vs. TrEMBL
Match: tr|A0A061FNU7|A0A061FNU7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_043093 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.1e-93
Identity = 182/240 (75.83%), Postives = 201/240 (83.75%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYYSGYHLQRSTAWINEKFVPTSNFLSQKNAVQKRWASQA 84
           M RAALFHLLRSQSK +  RN +SGY  + +T    +   P  N  +    VQKRW+SQA
Sbjct: 1   MARAALFHLLRSQSKQLISRNIHSGYPCRLATWSYTQYAKPNINSATSIFTVQKRWSSQA 60

Query: 85  TTREDDGKISIGPGRGQEAEEDEKD--VAYIGPISSTIKKVKLLSLSTCCLSVSLGPVIT 144
           TT E+D KISIGP +G+E EEDEKD  V Y GPISSTIKKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  TTTENDNKISIGPRKGREEEEDEKDRGVVYNGPISSTIKKVKLLSLSTCCLSVSLGPVIT 120

Query: 145 FMTSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDSFEVEVMSWLAT 204
           FMTSPDMNVILKG VASSVIF SATTT  LHWFVSPY+HKIRW+PGSDSFEVE+MSWLAT
Sbjct: 121 FMTSPDMNVILKGAVASSVIFFSATTTAVLHWFVSPYIHKIRWQPGSDSFEVEMMSWLAT 180

Query: 205 YIPRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQQ--RESALRNL 261
           YIPRTI+FADIRPPETNRPFVTFKANG+FYFVD+EHC NKALLARLTPQ+   +SAL+NL
Sbjct: 181 YIPRTIKFADIRPPETNRPFVTFKANGNFYFVDEEHCHNKALLARLTPQKATHDSALKNL 240

[Close]

BLAST of CsaV3_5G025890 vs. TrEMBL
Match: tr|A0A2I4G0F0|A0A2I4G0F0_9ROSI (uncharacterized protein LOC109003614 isoform X1 OS=Juglans regia OX=51240 GN=LOC109003614 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.4e-93
Identity = 183/249 (73.49%), Postives = 202/249 (81.12%), Query Frame = 0


Query: 25  MTRAALFHLLRSQSKHISRRNYY--SGYHLQRSTAW---------INEKFVPTSNFLSQK 84
           M   AL  LLRSQSK +S R+Y+  SGYH   S AW          N  F+P +      
Sbjct: 1   MASTALLRLLRSQSKRLSSRSYFPSSGYHPSGSGAWAHRLNAKPNFNPAFLPAA------ 60

Query: 85  NAVQKRWASQATTREDDGKISIGPGRGQEAEEDEKD--VAYIGPISSTIKKVKLLSLSTC 144
            A Q+RWAS ATT EDD KISIGP RG+EA +D+KD  V Y GPISST+KKVKLLSLSTC
Sbjct: 61  -AAQRRWASPATTNEDDSKISIGPRRGEEAGKDDKDTGVVYYGPISSTVKKVKLLSLSTC 120

Query: 145 CLSVSLGPVITFMTSPDMNVILKGVVASSVIFLSATTTGALHWFVSPYVHKIRWKPGSDS 204
           CLSVSLGPVITFMTSPDMNVILKG VASSVIFLSATTT ALHWFVSPYVHK+RW+PGSDS
Sbjct: 121 CLSVSLGPVITFMTSPDMNVILKGAVASSVIFLSATTTAALHWFVSPYVHKLRWQPGSDS 180

Query: 205 FEVEVMSWLATYIPRTIRFADIRPPETNRPFVTFKANGSFYFVDKEHCQNKALLARLTPQ 261
           FEVE+MSWLATY+PRTI+FADIRPPETNRPFVTFKANGSFYFVD+EHC NKALLARL+PQ
Sbjct: 181 FEVEMMSWLATYVPRTIKFADIRPPETNRPFVTFKANGSFYFVDEEHCHNKALLARLSPQ 240

The following BLAST results are available for this feature:

BLAST of CsaV3_5G025890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143808.1	1.4e-129	100.00	PREDICTED: uncharacterized protein LOC101213359 [Cucumis sativus] >KGN51224.1 hy...	[more]
XP_008465660.1	1.2e-123	96.61	PREDICTED: uncharacterized protein LOC103503301 [Cucumis melo]	[more]
XP_022964861.1	4.1e-116	85.08	uncharacterized protein LOC111464841 isoform X1 [Cucurbita moschata]	[more]
XP_022964869.1	3.6e-112	87.29	uncharacterized protein LOC111464841 isoform X2 [Cucurbita moschata]	[more]
XP_022990452.1	5.2e-111	86.86	uncharacterized protein LOC111487306 [Cucurbita maxima]	[more]

BLAST of CsaV3_5G025890 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35790.1	4.3e-75	62.66	unknown protein	[more]

BLAST of CsaV3_5G025890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G025890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KQP8\|A0A0A0KQP8_CUCSA	9.6e-130	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G495170 PE=4 SV=1	[more]
tr\|A0A1S3CPD9\|A0A1S3CPD9_CUCME	7.9e-124	96.61	uncharacterized protein LOC103503301 OS=Cucumis melo OX=3656 GN=LOC103503301 PE=...	[more]
tr\|A0A2I4G0F3\|A0A2I4G0F3_9ROSI	6.5e-94	73.90	uncharacterized protein LOC109003614 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A061FNU7\|A0A061FNU7_THECC	1.1e-93	75.83	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_043093 PE=4 SV=1	[more]
tr\|A0A2I4G0F0\|A0A2I4G0F0_9ROSI	1.4e-93	73.49	uncharacterized protein LOC109003614 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009724	TMEM70

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0001510	RNA methylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G025890.1	CsaV3_5G025890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009724	TMEM70 family	PFAM	PF06979	TMEM70	coord: 123..248 e-value: 1.4E-26 score: 93.3
IPR009724	TMEM70 family	PANTHER	PTHR13281	UNCHARACTERIZED	coord: 72..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..104

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G025890	CSPI05G16880	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G025890	Cucsa.275660	Cucumber (Gy14) v1	cgycucB422
CsaV3_5G025890	CmaCh04G025960	Cucurbita maxima (Rimu)	cmacucB0862
CsaV3_5G025890	CmoCh04G027170	Cucurbita moschata (Rifu)	cmocucB0848
CsaV3_5G025890	CsGy5G016610	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G025890	Carg04541	Silver-seed gourd	carcucB0724
CsaV3_5G025890	Cla004732	Watermelon (97103) v1	cucwmB387
CsaV3_5G025890	MELO3C002879	Melon (DHL92) v3.5.1	cucmeB359
CsaV3_5G025890	ClCG09G020510	Watermelon (Charleston Gray)	cucwcgB362
CsaV3_5G025890	Lsi02G017050	Bottle gourd (USVL1VR-Ls)	cuclsiB370
CsaV3_5G025890	MELO3C002879.2	Melon (DHL92) v3.6.1	cucmedB351
CsaV3_5G025890	Cla97C09G181930	Watermelon (97103) v2	cucwmbB424
CsaV3_5G025890	Bhi06G000574	Wax gourd	cucwgoB475

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G025890	Silver-seed gourd	carcucB0297
CsaV3_5G025890	Cucurbita maxima (Rimu)	cmacucB0354
CsaV3_5G025890	Cucurbita maxima (Rimu)	cmacucB0892
CsaV3_5G025890	Cucurbita moschata (Rifu)	cmocucB0349
CsaV3_5G025890	Cucurbita pepo (Zucchini)	cpecucB0211
CsaV3_5G025890	Cucurbita pepo (Zucchini)	cpecucB0519
CsaV3_5G025890	Cucurbita pepo (Zucchini)	cpecucB0550