Carg04515 (gene) Silver-seed gourd

Overview
NameCarg04515
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRibosomal protein
LocationCucurbita_argyrosperma_scaffold_032 : 801896 .. 804170 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCTATTTAATTAAACTTACTATAAATACGTTAGGGTTTCCTGCTTTCTCTCTTCTCTCCGCTTGAACCCTGGAAAGAAGCCCTAGTTCCCGCCCCTGCTCGTCGAACTTCTCGAAGTCGCCTCTGCAATTGCCGTAAGTATTTAGAGTCTTTATTCATATCAATGTAGCTTTATATGCGCCAAGATTGATCTGCTAGTATATATATTTTTTCATGTTAATCGACAGGGTACTGAATCAAGTAGTGTTCTGTTTTTCATGATTTATACGCTAGAGAGTGGGAATTTTTTAATGTTTCACTTTTAAATTTAGAATTCTGCGAGTTTATGACTGTTCTTCTGTATTTTTTGTTTTTGTTTTCGGGTTATAGACACTAGTTAACGCGCCTTTCTCCTTTCTTTACTGATGTAAGGGTTGCTTGTATGCGTGCTGTTTTATTTTATATCATTTTTTTGGTATGTTTAATGATACTCATTAGAAATATAGGCGGCTGATAGTTTGTTTTTCGTATGTGTGTTATTAGTTGTTATATATGTTTTTCGGATCTTAGAGAGGCACCTGATAGTTTGTCATGGACGATAATGTGATTTTATAGTCATTCTTGCATTTAACTTTGGGGATTTTTATATTTGCAGTAACAATGGTTCGTGTGAGTGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGTGGGAAGCGCCAGGTCATGATAAGGCCATCTTCTAAAGTTATCATCAAGTTTCTTAATGTCATGCAAAAGCATGGTAAATGTCAATAAGTTCACACCAGTCCCTTTTATTTGCTCCTTAAACCTGCATGACTTTATTTTGTTCAAAATTTCGTTTTAGGATACATTGGTGAGTTTGAGTACGTTGACGATCATAGGTCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATCAGTCCTCGTTTTGATATTGGTGTCAAGGAGATTGAAGGTTGGACTGCACGGTTGCTTCCCTCGAGACAGGTATTCTACTTACTCTGAGACTGCTTATTTAATTAGTATTATGCTTACGATTTATTAGTTTTCGCCTAATCCAAACTTTTATGACAATTATATTCGACTGTTTACAGTTTGGTTTCATTGTGTTGACAACTTCTGCGGGAATCATGGACCACGAAGAGGCCCGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTCTACTAAGCAATATTGTGAGATCGATTTTTCTTTTCTTTTCTTTTTTTCGGTATTTTCTGCACTTTTTGAACTTTAGTGGGAAGCAGTAGTGAGTCCTGTTTTGTTTTATTTGTGCCGTTTTGGTTGGGAGGATACAGGATACCACCTGCATTCTTTTTGAAGACCTTGATATTGTTTAATGAGCCTTTTCTTTTATCTTCTGGGTTGTTTTTTGTTTGCCCCTTGAACTGAAATTGTTGTAGTAGTTGTCTAGCTCCGGAATTGATTGCAGTTTTCCTGGACCGCAATGATCTTCTTCAGCCCATGAATTTGTATGTTGTACAACTTGTTTACGCTTGGTTTCAGTATCTACACATCTTGGTGGTTTCATAAACAGTTTTGTTCAACACTTGAGACCCATTTTTCAGAAATAAACATTAGAAGGGAAAATTTGTAGGCTCCTAGAAACTAGTTTTATAGTCACCTTGTGGTGGTCAGTTTTGCTAGAATGCTTGATAAATGTTTGGGTATTCCGGTGAGAGATTCTACGTGAAAATGAAGTGCAACGGCCAAGCATTAGTGTGGAAACCTCTCTTGTCGACGTGTTTTAAAACCGTGAACCTGATGGAGATATGTAATGGGCCAAAGCGAATAATACCTAGAAGCGGTGTGCTTGAGTTTTTTTTTACTCCCTGATAGTTGGATTCCTTTCAAGAAATGTATAGGCCAATTCCTATATAAAAACCAGAAGCTATGTGTAGGTCGTTTGGTTTGAATTTGAAGTTGAGGATTAAATCCTTCTATTTACACGTTAAATTAAAAGAATTTGCCATTTGCTGCCATTAGGTTCCATAATTTGCCATTAATACAAAGCATGAGATTGCAGTGAAGGTGTTAAGTATGTCTCCCATCTCTGTTTGCGATTTGGATGTGTGATCATTTCTTAATTAAGAAACCCAATGTTTCAGCAACAAGAAAGTTAGTTTAGTTAAGGTAGAAACAAAAGAAGGTAAACCATTTTCATCATTTGTAGAACTGGAATATAGAGTTCTCCTGACCGTCTACAATGGCGACTGA

mRNA sequence

AAATCTATTTAATTAAACTTACTATAAATACGTTAGGGTTTCCTGCTTTCTCTCTTCTCTCCGCTTGAACCCTGGAAAGAAGCCCTAGTTCCCGCCCCTGCTCGTCGAACTTCTCGAAGTCGCCTCTGCAATTGCCTAACAATGGTTCGTGTGAGTGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGTGGGAAGCGCCAGGTCATGATAAGGCCATCTTCTAAAGTTATCATCAAGTTTCTTAATGTCATGCAAAAGCATGGATACATTGGTGAGTTTGAGTACGTTGACGATCATAGGTCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATCAGTCCTCGTTTTGATATTGGTGTCAAGGAGATTGAAGGTTGGACTGCACGGTTGCTTCCCTCGAGACAGTTTGGTTTCATTGTGTTGACAACTTCTGCGGGAATCATGGACCACGAAGAGGCCCGAAGAAAGAACGTTGGTGGTAAAGTGCTTGAACTGGAATATAGAGTTCTCCTGACCGTCTACAATGGCGACTGA

Coding sequence (CDS)

ATGGTTCGTGTGAGTGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGTGGGAAGCGCCAGGTCATGATAAGGCCATCTTCTAAAGTTATCATCAAGTTTCTTAATGTCATGCAAAAGCATGGATACATTGGTGAGTTTGAGTACGTTGACGATCATAGGTCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATCAGTCCTCGTTTTGATATTGGTGTCAAGGAGATTGAAGGTTGGACTGCACGGTTGCTTCCCTCGAGACAGTTTGGTTTCATTGTGTTGACAACTTCTGCGGGAATCATGGACCACGAAGAGGCCCGAAGAAAGAACGTTGGTGGTAAAGTGCTTGAACTGGAATATAGAGTTCTCCTGACCGTCTACAATGGCGACTGA

Protein sequence

MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLELEYRVLLTVYNGD
Homology
[Close]
BLAST of Carg04515 vs. NCBI nr
Match: XP_022922996.1 (40S ribosomal protein S15a-1 [Cucurbita moschata] >XP_023534803.1 40S ribosomal protein S15a-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 3.0e-65
Identity = 127/130 (97.69%), Postives = 127/130 (97.69%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. NCBI nr
Match: XP_022990484.1 (40S ribosomal protein S15a-1 [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 3.9e-65
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. NCBI nr
Match: PPR86702.1 (hypothetical protein GOBAR_AA33985 [Gossypium barbadense])

HSP 1 Score: 253.8 bits (647), Expect = 3.3e-64
Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEYRVLL 135
           VGGKVL+ E  V L
Sbjct: 121 VGGKVLDYEVLVHL 134

[Close]
BLAST of Carg04515 vs. NCBI nr
Match: XP_022134546.1 (40S ribosomal protein S15a-1 [Momordica charantia] >XP_022143687.1 40S ribosomal protein S15a-1 [Momordica charantia] >XP_022938588.1 40S ribosomal protein S15a-1 [Cucurbita moschata] >XP_022938589.1 40S ribosomal protein S15a-1 [Cucurbita moschata] >XP_022993711.1 40S ribosomal protein S15a-1 [Cucurbita maxima] >XP_023549602.1 40S ribosomal protein S15a-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.4 bits (646), Expect = 4.3e-64
Identity = 125/130 (96.15%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. NCBI nr
Match: XP_022949003.1 (40S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022965015.1 40S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022965016.1 40S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022997822.1 40S ribosomal protein S15a-1-like [Cucurbita maxima] >XP_022970479.1 40S ribosomal protein S15a-1-like [Cucurbita maxima] >XP_022970480.1 40S ribosomal protein S15a-1-like [Cucurbita maxima] >XP_023523191.1 40S ribosomal protein S15a-1-like [Cucurbita pepo subsp. pepo] >XP_023520313.1 40S ribosomal protein S15a-1-like [Cucurbita pepo subsp. pepo] >XP_023520314.1 40S ribosomal protein S15a-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.4 bits (646), Expect = 4.3e-64
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TAIR10
Match: AT1G07770.1 (ribosomal protein S15A)

HSP 1 Score: 251.9 bits (642), Expect = 2.3e-67
Identity = 123/130 (94.62%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TAIR10
Match: AT5G59850.1 (Ribosomal protein S8 family protein)

HSP 1 Score: 251.9 bits (642), Expect = 2.3e-67
Identity = 123/130 (94.62%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TAIR10
Match: AT3G46040.1 (ribosomal protein S15A D)

HSP 1 Score: 251.5 bits (641), Expect = 3.0e-67
Identity = 123/130 (94.62%), Postives = 125/130 (96.15%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TAIR10
Match: AT2G39590.1 (Ribosomal protein S8 family protein)

HSP 1 Score: 237.3 bits (604), Expect = 5.8e-63
Identity = 115/130 (88.46%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFEYVDDHRSGK
Sbjct: 7   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 66

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 67  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 126

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 127 VGGKVLGFFY 136

[Close]
BLAST of Carg04515 vs. TAIR10
Match: AT4G29430.1 (ribosomal protein S15A E)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 63/125 (50.40%), Postives = 91/125 (72.80%), Query Frame = 0 

Query: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGKIVVEL 65
           +LNDAL+++ NAE+RGK  V ++P S V+  FL +M++ GYI  F+  D HR G+I V+L
Sbjct: 5   ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64

Query: 66  NGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKV 125
            GR+N C  ++ R D+  KEIE +T R LP+RQ+G++V+TT  GI+DHEEA ++NVGG+V
Sbjct: 65  QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQV 124

Query: 126 LELEY 131
           L   Y
Sbjct: 125 LGFFY 129

[Close]
BLAST of Carg04515 vs. Swiss-Prot
Match: sp|P42798|R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 4.1e-66
Identity = 123/130 (94.62%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. Swiss-Prot
Match: sp|Q9LX88|R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 251.5 bits (641), Expect = 5.4e-66
Identity = 123/130 (94.62%), Postives = 125/130 (96.15%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. Swiss-Prot
Match: sp|Q00332|RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-65
Identity = 122/130 (93.85%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. Swiss-Prot
Match: sp|Q9AT34|RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 247.7 bits (631), Expect = 7.8e-65
Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIE WTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. Swiss-Prot
Match: sp|O80646|R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-61
Identity = 115/130 (88.46%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFEYVDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TrEMBL
Match: tr|A0A2P5W6J6|A0A2P5W6J6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA33985 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.2e-64
Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEYRVLL 135
           VGGKVL+ E  V L
Sbjct: 121 VGGKVLDYEVLVHL 134

[Close]
BLAST of Carg04515 vs. TrEMBL
Match: tr|A0A1J3E0F1|A0A1J3E0F1_NOCCA (40S ribosomal protein S15a-1 OS=Noccaea caerulescens OX=107243 GN=GA_TR4391_c0_g1_i1_g.15031 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.8e-64
Identity = 123/130 (94.62%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLTVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TrEMBL
Match: tr|I3SJY8|I3SJY8_MEDTR (Ribosomal protein S8 OS=Medicago truncatula OX=3880 GN=25485233 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.9e-64
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TrEMBL
Match: tr|A0A1S4DBQ8|A0A1S4DBQ8_TOBAC (40S ribosomal protein S15a-1 OS=Nicotiana tabacum OX=4097 GN=LOC107828126 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.4e-64
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg04515 vs. TrEMBL
Match: tr|A0A1U8F9V3|A0A1U8F9V3_CAPAN (40S ribosomal protein S15a OS=Capsicum annuum OX=4072 GN=T459_16822 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.4e-64
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLNVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLELEY 131
           VGGKVL   Y
Sbjct: 121 VGGKVLGFFY 130

The following BLAST results are available for this feature:
BLAST of Carg04515 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922996.13.0e-6597.6940S ribosomal protein S15a-1 [Cucurbita moschata] >XP_023534803.1 40S ribosomal ... [more]
XP_022990484.13.9e-6596.9240S ribosomal protein S15a-1 [Cucurbita maxima][more]
PPR86702.13.3e-6493.28hypothetical protein GOBAR_AA33985 [Gossypium barbadense][more]
XP_022134546.14.3e-6496.1540S ribosomal protein S15a-1 [Momordica charantia] >XP_022143687.1 40S ribosomal... [more]
XP_022949003.14.3e-6495.3840S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022965015.1 40S ribos... [more]
BLAST of Carg04515 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07770.12.3e-6794.62ribosomal protein S15A[more]
AT5G59850.12.3e-6794.62Ribosomal protein S8 family protein[more]
AT3G46040.13.0e-6794.62ribosomal protein S15A D[more]
AT2G39590.15.8e-6388.46Ribosomal protein S8 family protein[more]
AT4G29430.11.3e-3350.40ribosomal protein S15A E[more]
BLAST of Carg04515 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P42798|R15A1_ARATH4.1e-6694.6240S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=... [more]
sp|Q9LX88|R15A4_ARATH5.4e-6694.6240S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=... [more]
sp|Q00332|RS15A_BRANA1.2e-6593.8540S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3[more]
sp|Q9AT34|RS15A_DAUCA7.8e-6593.0840S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3[more]
sp|O80646|R15A3_ARATH1.1e-6188.4640S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=... [more]
BLAST of Carg04515 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5W6J6|A0A2P5W6J6_GOSBA2.2e-6493.28Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA33985 PE=3 SV... [more]
tr|A0A1J3E0F1|A0A1J3E0F1_NOCCA3.8e-6494.6240S ribosomal protein S15a-1 OS=Noccaea caerulescens OX=107243 GN=GA_TR4391_c0_g... [more]
tr|I3SJY8|I3SJY8_MEDTR4.9e-6495.38Ribosomal protein S8 OS=Medicago truncatula OX=3880 GN=25485233 PE=2 SV=1[more]
tr|A0A1S4DBQ8|A0A1S4DBQ8_TOBAC6.4e-6495.3840S ribosomal protein S15a-1 OS=Nicotiana tabacum OX=4097 GN=LOC107828126 PE=3 S... [more]
tr|A0A1U8F9V3|A0A1U8F9V3_CAPAN6.4e-6495.3840S ribosomal protein S15a OS=Capsicum annuum OX=4072 GN=T459_16822 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR035987Ribosomal_S8_sf
IPR000630Ribosomal_S8
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04515-RACarg04515-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.1490.10coord: 70..128
e-value: 1.0E-31
score: 110.6
NoneNo IPR availableGENE3DG3DSA:3.30.1370.30coord: 1..69
e-value: 3.4E-39
score: 134.4
NoneNo IPR availablePANTHERPTHR11758:SF16RIBOSOMAL PROTEIN S15Acoord: 1..128
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 7..126
e-value: 5.8E-22
score: 77.9
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 1..128
IPR000630Ribosomal protein S8PROSITEPS00053RIBOSOMAL_S8coord: 100..117
IPR000630Ribosomal protein S8HAMAPMF_01302_ARibosomal_S8_Acoord: 2..130
score: 31.667
IPR035987Ribosomal protein S8 superfamilySUPERFAMILYSSF56047Ribosomal protein S8coord: 4..127