Carg04493 (gene) Silver-seed gourd

Overview
NameCarg04493
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscription initiation factor TFIID subunit 7
LocationCucurbita_argyrosperma_scaffold_032 : 676476 .. 678479 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTTAAATAAGATGGAATTTTCTGGATTTTCAGTATCTCTCGACTCTTTCCCCCGCGCTATCGGTACCCCTCGATTTCTCTCTTTCACAGCTATCCCCTCGATTTCTCCCTCGCCGGCGGCAACCGTCAATCGTGGGGGACGGCTTTTGTATCCTTGATTTGGTACAAGGGCTGTTAAAAGCTCATAGCACAGGATACAAAAAACCTGACACCAACACACCCTTCAAGAATACAAGGTAATCCAAGATTATGTTTTCAAGAATTGAACCAATTTTCGTTTGGAAGCCCAATTCTTTCCAGATTTGATAACCCAAAAGGCACTATTTCTAGAACCCTATTTCTTTTTCATTGCCGAATGATGATTTTGTTTATCAACCTTACAAAGAATAAAAATGGTTTTCGTTTACGATGGTTGATCTTCTTTGTGCAGCAGTTTTATTGATTTTGACTCTGAATTCATGGAGGAGCAATTTGTACTGAGGGTTCCACCTTCTGTTGCTGAACGAATTGAACGTCTACTGAATGAAAATGCTTCTTCATCTGAAGATCCTTCATTGGATTTGTCTTTCTCTGGTAAAAGAAACTTATGCAGGCATCTTCTGGTTCAATCTCCCTGTTCTGTGCTTTTTTCATTACATTTGCTCTGATGTTAGATGAATAGATTAACCTCTAGACTTTTGGACTGATTGGCTTTGGAAATAGATCAAACTGTGCAGTATGGTTTTATCTTAATTTTGAGGGTTGGCCTAATTGCCTATTTATGGCCTCTTAAATTGTCACACAGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGACGACCATTTTCCAGCATCACTTCTGGATCTCCCTTGTGTAGTGGAATCATATAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGACATTGCCCAGGTAAAATTGTATCAAAATCTTTAGTCTATACATTTCAGGTGATATGATCTGGCTGTTTCTTAGATTTTATGGGATGCTATCATTTTAACAGATGATTATGGTCAGAGATCCAGGCGACCCTGCGCCAGATTCAACCGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAGCCGGATTTAAATGTATGCCATTCTTATCCGTCTTACTATTAGCTTGATAGTAAACTTGTGTACGACATGATAATCCATTTAGATTCCTACTTGTACAAGGAGTAGGTAGTTGAGGACAAATTATTGGACAGTGACATATCTTTTGTTCTTCACATCAAAATTTGTTGCATTTAGAAAGTGCCTTTTGATTGTTACATACTCATTCTTTCTCTCTTCTTTTTGGCAGCCTGAGCTTGTACGACGTGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACCGAAAATGCAGATATCCTTGATAATTTATGTGTTTGAAACTCATTACCATATTAGTTTATGAAACATGTACACATCCGGTAAGCCTAAGTCCATCACTAGCAGATATTGTCATTTTTGGGCTTCCTCTCAAGATTTTAAAACGTGTATGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCAATCCACCCCCTTCGGGGTCTAGCGTCTTCGCTGGCGCTCGTTCCCTTCTCCAATTGATATAGGTCCTTCCCCCCCTCCCCCCTCCCAAATCCACCCCTCTTTAGGGTCTAGTGTCCTTGCTGGCACATCGTCTCATTCCCTTCTCCAATTAATATAGGTGCCTTTTTCTCCTCATCTTCTGACATAAAGTTATGATCTTATGCTACAATTTTAACTTTAGAGGTTCCTTAACTGAGCATTCTCACATGTTGGAGTGGCTGAACATCAAGATGATAGACACGAGAATTCTCATCATGCAAGTGCAAAGCCTGCATCCACCCCTGCAGCGAAGCCTGATGTGATGGAAACTGAGACAACTGTTGGGGAGCCTGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGATTAG

mRNA sequence

TGGTTTAAATAAGATGGAATTTTCTGGATTTTCAGTATCTCTCGACTCTTTCCCCCGCGCTATCGGTACCCCTCGATTTCTCTCTTTCACAGCTATCCCCTCGATTTCTCCCTCGCCGGCGGCAACCGTCAATCGTGGGGGACGGCTTTTGTATCCTTGATTTGGTACAAGGGCTGTTAAAAGCTCATAGCACAGGATACAAAAAACCTGACACCAACACACCCTTCAAGAATACAAGGTAATCCAAGATTATGTTTTCAAGAATTGAACCAATTTTCGTTTGGAAGCCCAATTCTTTCCAGATTTGATAACCCAAAAGTTTTATTGATTTTGACTCTGAATTCATGGAGGAGCAATTTGTACTGAGGGTTCCACCTTCTGTTGCTGAACGAATTGAACGTCTACTGAATGAAAATGCTTCTTCATCTGAAGATCCTTCATTGGATTTGTCTTTCTCTGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGACGACCATTTTCCAGCATCACTTCTGGATCTCCCTTGTGTAGTGGAATCATATAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGACATTGCCCAGATGATTATGGTCAGAGATCCAGGCGACCCTGCGCCAGATTCAACCGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAGCCGGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACCGAAAATGCAGATGTTGGAGTGGCTGAACATCAAGATGATAGACACGAGAATTCTCATCATGCAAGTGCAAAGCCTGCATCCACCCCTGCAGCGAAGCCTGATGTGATGGAAACTGAGACAACTGTTGGGGAGCCTGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGATTAG

Coding sequence (CDS)

ATGGAGGAGCAATTTGTACTGAGGGTTCCACCTTCTGTTGCTGAACGAATTGAACGTCTACTGAATGAAAATGCTTCTTCATCTGAAGATCCTTCATTGGATTTGTCTTTCTCTGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGACGACCATTTTCCAGCATCACTTCTGGATCTCCCTTGTGTAGTGGAATCATATAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGACATTGCCCAGATGATTATGGTCAGAGATCCAGGCGACCCTGCGCCAGATTCAACCGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAGCCGGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACCGAAAATGCAGATGTTGGAGTGGCTGAACATCAAGATGATAGACACGAGAATTCTCATCATGCAAGTGCAAAGCCTGCATCCACCCCTGCAGCGAAGCCTGATGTGATGGAAACTGAGACAACTGTTGGGGAGCCTGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGATTAG

Protein sequence

MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVMETETTVGEPERSDSDDSDHSID
Homology
[Close]
BLAST of Carg04493 vs. NCBI nr
Match: XP_022960612.1 (transcription initiation factor TFIID subunit 7 [Cucurbita moschata] >XP_022960616.1 transcription initiation factor TFIID subunit 7 [Cucurbita moschata] >XP_022960625.1 transcription initiation factor TFIID subunit 7 [Cucurbita moschata] >XP_022960633.1 transcription initiation factor TFIID subunit 7 [Cucurbita moschata])

HSP 1 Score: 393.3 bits (1009), Expect = 5.0e-106
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180

Query: 181 TETTVGEPERSDSDDSDHSID 202
           TETTVGEPERSDSDDSDHSID
Sbjct: 181 TETTVGEPERSDSDDSDHSID 201

[Close]
BLAST of Carg04493 vs. NCBI nr
Match: XP_023516679.1 (transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516685.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516692.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516700.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-105
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIAQMIMVR+PGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180

Query: 181 TETTVGEPERSDSDDSDHSID 202
           TETTVGEPERSDSDDSDHSID
Sbjct: 181 TETTVGEPERSDSDDSDHSID 201

[Close]
BLAST of Carg04493 vs. NCBI nr
Match: XP_022990128.1 (transcription initiation factor TFIID subunit 7 isoform X2 [Cucurbita maxima])

HSP 1 Score: 390.6 bits (1002), Expect = 3.3e-105
Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 84  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 143

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIAQMIMVR+PGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 144 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 203

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDD+HENSHHASAKPASTPAAKPDVME
Sbjct: 204 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDKHENSHHASAKPASTPAAKPDVME 263

Query: 181 TETTVGEPERSDSDDSDHSID 202
           TETTVGEPERSDSDDSDHSID
Sbjct: 264 TETTVGEPERSDSDDSDHSID 284

[Close]
BLAST of Carg04493 vs. NCBI nr
Match: XP_022990127.1 (transcription initiation factor TFIID subunit 7 isoform X1 [Cucurbita maxima])

HSP 1 Score: 390.6 bits (1002), Expect = 3.3e-105
Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 85  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 144

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIAQMIMVR+PGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 145 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 204

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDD+HENSHHASAKPASTPAAKPDVME
Sbjct: 205 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDKHENSHHASAKPASTPAAKPDVME 264

Query: 181 TETTVGEPERSDSDDSDHSID 202
           TETTVGEPERSDSDDSDHSID
Sbjct: 265 TETTVGEPERSDSDDSDHSID 285

[Close]
BLAST of Carg04493 vs. NCBI nr
Match: XP_022990129.1 (transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >XP_022990130.1 transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima])

HSP 1 Score: 390.6 bits (1002), Expect = 3.3e-105
Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIAQMIMVR+PGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDD+HENSHHASAKPASTPAAKPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDKHENSHHASAKPASTPAAKPDVME 180

Query: 181 TETTVGEPERSDSDDSDHSID 202
           TETTVGEPERSDSDDSDHSID
Sbjct: 181 TETTVGEPERSDSDDSDHSID 201

[Close]
BLAST of Carg04493 vs. TAIR10
Match: AT1G55300.2 (TBP-associated factor 7)

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-62
Identity = 113/145 (77.93%), Postives = 133/145 (91.72%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADI QMIMVR+PGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

[Close]
BLAST of Carg04493 vs. Swiss-Prot
Match: sp|B9DG24|TAF7_ARATH (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.5e-61
Identity = 113/145 (77.93%), Postives = 133/145 (91.72%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADI QMIMVR+PGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

[Close]
BLAST of Carg04493 vs. Swiss-Prot
Match: sp|Q9D3R9|TAF7L_MOUSE (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 8.1e-15
Identity = 47/155 (30.32%), Postives = 82/155 (52.90%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +EEQF+LR+PP  A  + ++++   ++ +D  L + FS DG      + +   PA L++L
Sbjct: 106 VEEQFILRLPPEQAYAVRKIIHSRNAAWKD-KLKIDFSPDGHHAVVQVDNVSLPAKLVNL 165

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTE--------------------- 120
           PCV+ S KT D     K AD++QM++    G+P     E                     
Sbjct: 166 PCVIGSLKTIDRKTFYKTADVSQMLVCSPEGEPHSPPEEPVVSTGPTVIGISEGKAERKK 225

Query: 121 --YRHGLTPPMRDARKRRFRREPDLNPELVRRVEK 133
             ++HG+TPP+++ RK+RFR+     P+ V++V++
Sbjct: 226 YNWKHGITPPLKNVRKKRFRKTTKKLPD-VKQVDE 258

[Close]
BLAST of Carg04493 vs. Swiss-Prot
Match: sp|Q9R1C0|TAF7_MOUSE (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 52/163 (31.90%), Postives = 74/163 (45.40%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYAATVRRAVQSGHVNLKD-KLSIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTE--------------------- 120
           PCV ES KT D     K ADI+QM++    GD  P   E                     
Sbjct: 72  PCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEAAATADPKANKXXXXXXXXKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of Carg04493 vs. Swiss-Prot
Match: sp|Q6R1L1|TAF7_CRIGR (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13
Identity = 52/163 (31.90%), Postives = 74/163 (45.40%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTE--------------------- 120
           PCV+ES KT D     K ADI QM++    GD  P   E                     
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVAPADPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of Carg04493 vs. Swiss-Prot
Match: sp|Q15545|TAF7_HUMAN (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.8e-13
Identity = 51/163 (31.29%), Postives = 74/163 (45.40%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      + L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLASKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTE--------------------- 120
           PCV+ES KT D     K ADI QM++    GD  P   E                     
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 IWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of Carg04493 vs. TrEMBL
Match: tr|A0A1S3C8V9|A0A1S3C8V9_CUCME (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 5.7e-82
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVR+PGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASA 167
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAE QDDR EN HH +A
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPHHTNA 166

[Close]
BLAST of Carg04493 vs. TrEMBL
Match: tr|A0A0A0KSB3|A0A0A0KSB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.7e-78
Identity = 152/160 (95.00%), Postives = 155/160 (96.88%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 96  MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 155

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVR+P DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 156 PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 215

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHEN 161
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAE QDDR EN
Sbjct: 216 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDEN 255

[Close]
BLAST of Carg04493 vs. TrEMBL
Match: tr|A0A2R6RY41|A0A2R6RY41_ACTCH (Transcription initiation factor TFIID subunit like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02139 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.8e-78
Identity = 153/200 (76.50%), Postives = 173/200 (86.50%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSVAERIERLLNE+A++SED SLDLSFSEDGRSG+F IG+DHFPASLLDL
Sbjct: 1   MEEQFILRVPPSVAERIERLLNESAAASEDKSLDLSFSEDGRSGSFVIGNDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P +VESYKTYDD+VLIK ADI QMIMVR+ GDP P++ EYRHGLTPPMRDAR+RRFRREP
Sbjct: 61  PTIVESYKTYDDSVLIKTADIGQMIMVREEGDPTPEAVEYRHGLTPPMRDARRRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELV+RVEKDLLNIMAGGT ENADV VA H++D   N+ +AS K +  PAAKPDV +
Sbjct: 121 DLNPELVQRVEKDLLNIMAGGTAENADVEVAGHEEDGDANTRNASKKTSPAPAAKPDVPD 180

Query: 181 TETTVGEPERSDSDDSDHSI 201
                 EPERSDSD+SD SI
Sbjct: 181 ARENAAEPERSDSDESDDSI 200

[Close]
BLAST of Carg04493 vs. TrEMBL
Match: tr|A0A2C9WHY4|A0A2C9WHY4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G036600 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 152/200 (76.00%), Postives = 170/200 (85.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSVAER++RLL+E+ASSSED SLDLSFSEDGRSGTF IG++HFPASLLDL
Sbjct: 1   MEEQFILRVPPSVAERLDRLLSESASSSEDQSLDLSFSEDGRSGTFVIGNEHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDD  L+K ADI QMIMVR+ GD APD+ EYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDCALVKTADIGQMIMVREAGDIAPDAVEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELV+RVEKDLLNIMAGGT ENADV   E ++D  +N  + S K +  PAAKPDV E
Sbjct: 121 DLNPELVQRVEKDLLNIMAGGTVENADVEANEQEEDGEQNIRNVSKKTSPAPAAKPDVQE 180

Query: 181 TETTVGEPERSDSDDSDHSI 201
                GEPERSDSD+SD S+
Sbjct: 181 PVANAGEPERSDSDESDDSL 200

[Close]
BLAST of Carg04493 vs. TrEMBL
Match: tr|A0A1U7ZZ39|A0A1U7ZZ39_NELNU (transcription initiation factor TFIID subunit 7 OS=Nelumbo nucifera OX=4432 GN=LOC104597644 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 9.5e-77
Identity = 154/200 (77.00%), Postives = 170/200 (85.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+ENASSSED SLDLSFSEDGR+GTF IG+DHFPA+LLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSENASSSEDKSLDLSFSEDGRNGTFVIGNDHFPAALLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PC+VESYKTYDD VLIK ADI Q+IMVR+ GDPAPD  EYRHGLTPPMRDAR+RRFRREP
Sbjct: 61  PCIVESYKTYDDNVLIKTADIGQIIMVREEGDPAPDGVEYRHGLTPPMRDARRRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180
           DLNPELV+RVEKDL+NIMAGGT EN DV V    +D  EN+  A  K A  PA KPDV E
Sbjct: 121 DLNPELVQRVEKDLVNIMAGGTAENVDVEV----EDGDENAPKAPEKAAPEPATKPDVPE 180

Query: 181 TETTVGEPERSDSDDSDHSI 201
           T T  GEPERSDSDDSD S+
Sbjct: 181 TGTAGGEPERSDSDDSDDSM 196

The following BLAST results are available for this feature:
BLAST of Carg04493 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960612.15.0e-106100.00transcription initiation factor TFIID subunit 7 [Cucurbita moschata] >XP_0229606... [more]
XP_023516679.11.5e-10599.50transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022990128.13.3e-10599.00transcription initiation factor TFIID subunit 7 isoform X2 [Cucurbita maxima][more]
XP_022990127.13.3e-10599.00transcription initiation factor TFIID subunit 7 isoform X1 [Cucurbita maxima][more]
XP_022990129.13.3e-10599.00transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >X... [more]
BLAST of Carg04493 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55300.24.2e-6277.93TBP-associated factor 7[more]
BLAST of Carg04493 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|B9DG24|TAF7_ARATH7.5e-6177.93Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9D3R9|TAF7L_MOUSE8.1e-1530.32Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN... [more]
sp|Q9R1C0|TAF7_MOUSE1.2e-1331.90Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7... [more]
sp|Q6R1L1|TAF7_CRIGR2.6e-1331.90Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 G... [more]
sp|Q15545|TAF7_HUMAN5.8e-1331.29Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 ... [more]
BLAST of Carg04493 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C8V9|A0A1S3C8V9_CUCME5.7e-8295.18transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KSB3|A0A0A0KSB3_CUCSA1.7e-7895.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=4 SV=1[more]
tr|A0A2R6RY41|A0A2R6RY41_ACTCH3.8e-7876.50Transcription initiation factor TFIID subunit like OS=Actinidia chinensis var. c... [more]
tr|A0A2C9WHY4|A0A2C9WHY4_MANES1.9e-7776.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G036600 PE=4 SV=... [more]
tr|A0A1U7ZZ39|A0A1U7ZZ39_NELNU9.5e-7777.00transcription initiation factor TFIID subunit 7 OS=Nelumbo nucifera OX=4432 GN=L... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Vocabulary: Cellular Component
TermDefinition
GO:0005669transcription factor TFIID complex
Vocabulary: INTERPRO
TermDefinition
IPR037817TAF7
IPR006751TAFII55_prot_cons_reg
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04493-RACarg04493-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006751TAFII55 protein, conserved regionSMARTSM01370TAFII55_N_2coord: 1..145
e-value: 4.5E-59
score: 212.2
IPR006751TAFII55 protein, conserved regionPFAMPF04658TAFII55_Ncoord: 1..136
e-value: 4.2E-32
score: 111.0
IPR006751TAFII55 protein, conserved regionCDDcd08047TAF7coord: 2..147
e-value: 1.83563E-41
score: 138.941
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..164
NoneNo IPR availablePANTHERPTHR12228:SF0TAF7 RNA POLYMERASE II, TATA BOX BINDING PROTEIN TBP -ASSOCIATED FACTORcoord: 1..198
IPR037817Transcription initiation factor TFIID subunit 7PANTHERPTHR12228TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDcoord: 1..198