Carg04203 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04203
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	vicilin-like seed storage protein At2g18540
Location	Cucurbita_argyrosperma_scaffold_044 : 820933 .. 822598 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCAACAATAACAGCAACAATTGTAGGATTAATGGCGACAGCAGGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTGCAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCCAAGGAAAAGAAATTTGGGTATCCATTTCTCTTATCTATCTTCCTCTTCCTTGGCTGTTTGATCAGTTCTACACTTCCAGTGGCTTATGGCTCTTTAAGTTCTTTGGCGCATCTTATCAAGTTGTTGTGTTCACATCTGTAAAATGGGATTGAATTAAGTTGGTTGTGTTGTATGTTTGTGTTTATGTTTCCATGAGTAGAGAGATTGATATTCAATAGCAATGCATCGTATTTTTTGTTTGTAAGTCAAATAAAATATCAGTATAAGATACTGATGGTTTGTGCATTTAGAATTGAAGTGTTTGTTCATTTAGAATTGAAGTGTGTTCTAAATTCATATATCTGTCTGATGATTCTCTTCTTGCCATAACATCTTCCTTTCATGCTCAGGATTGCTTTCCATCATTTCATAATTTAGCATTATTTTCTTCCTTTGCTCTGTCTTTCATCTTCTGGTTTATCTTCTCTGTAATCTAAGATTATCATGAAATTAGTAAAACTTGGTTCTATTTTCTATTTTACCAAATAAGTTTTCCGATTCAGAATGTTTAAATTCATTTTTAAAGATAGACTATAGTTTTCAAATATAGCTTTGAGACAATCTTTAAACCATAAGTTTTCATGATTAGTAATTATTTTATTAGATATCAGTGTAAGAGATGAAATGACCGCATCATCATTTTGTCTCTTAATCAAGGTTAGCAGTATATATGTTCATGTTTGGCATCATAAACTTAGTAATGTAGAAGTTTTAACTTTTTGAGACTCTGTTAAATTATGAATTATGAGAACTAGTAATTGTCTAAAAAAAACAAAAGTTATGGTACCCAGTGATTTCAAGAGTGACTTGGTGTTGGAAAATGAATTCATCTCTGAACAGCATTTTGCTACACCTAGTAAATAAATATGAGAATGTGGAAGTTTGGAAGTCAAAAGTTCACAGTTTAAAGACTAGGCATAATAGATAACAATGTTCAAACCCAAGGGAATTTGGAAATTTGAGTTTTCCTTTTGGTTCTTTGATTTGGTCACTTAACAATGTTTTTCTGTGATTTTCAGTTATTCAATGGTTTACTTAACCAAAGCCACCATATCAGGACGTGGAGCTGAAAAAGAAGGAATTCATGAAAAGATTTTGGAACTTCAGGAGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAATCAGGGAGTGATAGTATAAAAAAGAACTCTGAGAAGGGTTAAGAAGTGGATAAAACCAAACATGGGGAAAATACTAATGCAAGCAGCATGGGGAATGCGCCAGAGTTGAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATCACGAAAAGATGCTAAGCATGAAAACCACGGTGGAGGATCTTCTCTAGATGCCAAGAGATGA

mRNA sequence

ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCAACAATAACAGCAACAATTGTAGGATTAATGGCGACAGCAGGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTGCAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCCAAGGAAAAGAAATTTGGGTATCCATTTCTCTTATCTATCTTCCTCTTCCTTGGCTTTATTCAATGGAGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAATCAGGGAGTGATAGTATAAAAAAGAACTCTGAGAAGGAAGTGGATAAAACCAAACATGGGGAAAATACTAATGCAAGCAGCATGGGGAATGCGCCAGAGTTGAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATCACGAAAAGATGCTAAGCATGAAAACCACGGTGGAGGATCTTCTCTAGATGCCAAGAGATGA

Coding sequence (CDS)

ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCAACAATAACAGCAACAATTGTAGGATTAATGGCGACAGCAGGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTGCAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCCAAGGAAAAGAAATTTGGGTATCCATTTCTCTTATCTATCTTCCTCTTCCTTGGCTTTATTCAATGGAGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAATCAGGGAGTGATAGTATAAAAAAGAACTCTGAGAAGGAAGTGGATAAAACCAAACATGGGGAAAATACTAATGCAAGCAGCATGGGGAATGCGCCAGAGTTGAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATCACGAAAAGATGCTAAGCATGAAAACCACGGTGGAGGATCTTCTCTAGATGCCAAGAGATGA

Protein sequence

MIRARASWSRFSNRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNLPRKRNLGIHFSYLSSSSLALFNGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVDKTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

Homology

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BLAST of Carg04203 vs. NCBI nr
Match: XP_004152172.1 (PREDICTED: uncharacterized protein LOC101207869 [Cucumis sativus] >KGN52943.1 hypothetical protein Csa_4G006500 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 2.8e-37
Identity = 117/257 (45.53%), Postives = 143/257 (55.64%), Query Frame = 0


Query: 1   MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQL 60
           M RARASWS FS        RSFCSK HI TN +SNN +INGD++VE DL SYNEA KQL
Sbjct: 1   MFRARASWSSFSKRLKPLETRSFCSKSHIQTNKSSNNGKINGDNKVEPDLSSYNEAYKQL 60

Query: 61  NNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF------------------ 120
           +NL+ M +S  L     +K+  G+ F      ++   SLA++                  
Sbjct: 61  DNLDLMTASKILFTQPSKKKKFGLDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEAXXX 120

Query: 121 -----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIK 180
                                          VKTRLDKLE TIKEIA+ESRKQSG+ +I 
Sbjct: 121 XXXXXXXXXXXXXXXXXXXEKIHEMNPELQEVKTRLDKLENTIKEIAVESRKQSGTGNIT 180

Query: 181 KNSEKEVD--KTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRK 193
           KNSEK  D  KTKHG N ++         +KSM+ HL G+KIV APV PKGR +E T+R 
Sbjct: 181 KNSEKGEDAVKTKHGVNIDS---------TKSMDDHLGGQKIVPAPVLPKGRVSESTTRD 240

[Close]

BLAST of Carg04203 vs. NCBI nr
Match: XP_008454169.1 (PREDICTED: uncharacterized protein LOC103494654 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34
Identity = 114/257 (44.36%), Postives = 142/257 (55.25%), Query Frame = 0


Query: 1   MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQL 60
           M RARASWS FS        RSFCSK HI TN +SNN +INGD++V+ DL SY+EA KQL
Sbjct: 1   MFRARASWSSFSKRLKPLETRSFCSKPHIQTNKSSNNGKINGDNKVDPDLSSYHEAYKQL 60

Query: 61  NNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF------------------ 120
           +NL+FM +S  L     +K+  G+ F      ++   SLA++                  
Sbjct: 61  DNLDFMTASKILFTQPSKKKKFGLDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEAXXX 120

Query: 121 -----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIK 180
                                          VKTRLDKLE+TIKEIA+ESRKQSG+ +I 
Sbjct: 121 XXXXXXXXXXXXXXXXXXXEKIHEMNPELQEVKTRLDKLEKTIKEIAVESRKQSGTGNIT 180

Query: 181 KNSEKEVD--KTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRK 193
           KNSEK  D  KTKHG N +          +KSM+ HL G+KIV APV PK  A+E T+R+
Sbjct: 181 KNSEKGEDAVKTKHGVNIDP---------TKSMDDHLGGQKIVPAPVLPKDCASESTTRE 240

[Close]

BLAST of Carg04203 vs. NCBI nr
Match: XP_022956225.1 (uncharacterized protein LOC111457985 [Cucurbita moschata] >XP_022956226.1 uncharacterized protein LOC111457985 [Cucurbita moschata])

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 117/256 (45.70%), Postives = 139/256 (54.30%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQL 60
           M RARAS SRFS R        FCSK  I TN NSNN  ING ++VESDL SY EA KQL
Sbjct: 1   MFRARASLSRFSKRLKPFQTSPFCSKSRIGTNKNSNNGEINGSNKVESDLSSYKEAYKQL 60

Query: 61  NNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF------------------ 120
           +NL+FM +S  L    P+K+  GI F      ++   SLA++                  
Sbjct: 61  DNLDFMTASKILFTDPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEADLE 120

Query: 121 ----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKK 180
                                         VKTRLDKLEETIKEIA+ESRKQSGS  + K
Sbjct: 121 LKKXXXXXXAKQIKLEEREEIHDKNQELQEVKTRLDKLEETIKEIAVESRKQSGSGIVTK 180

Query: 181 NSEKE--VDKTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKD 193
           NSEK   VDKTKHG N +          SKSM+ HL G+KIV APV PK RA+  T+ +D
Sbjct: 181 NSEKAQGVDKTKHGANIDP---------SKSMDDHLGGQKIVPAPVLPKIRAS--TTGED 240

[Close]

BLAST of Carg04203 vs. NCBI nr
Match: XP_022153425.1 (uncharacterized protein LOC111020934 [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 6.0e-32
Identity = 115/257 (44.75%), Postives = 135/257 (52.53%), Query Frame = 0


Query: 1   MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQL 60
           M  AR SW RFS        RSFCSK H PTNNN NN       +VESDL SY EA KQL
Sbjct: 1   MFGARVSWGRFSKRFKPFQTRSFCSKSHTPTNNNGNN-------KVESDLSSYGEAYKQL 60

Query: 61  NNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF------------------ 120
           +NL+FM +S  L    P+K+  GI F      ++   SLA++                  
Sbjct: 61  DNLDFMTASKILFTDPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEADXX 120

Query: 121 -----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIK 180
                                          VK RLDKLEETIKEIA+ESRK SGS +  
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXKNPELQEVKIRLDKLEETIKEIAVESRKPSGSGT-X 180

Query: 181 KNSEK--EVDKTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRK 193
           KNSEK  E  K KHGEN    +MGNA E SKS+  HL  +KI  APV PKGR +E TS++
Sbjct: 181 KNSEKDREGGKVKHGEN----NMGNASESSKSVEDHLGRQKIELAPVLPKGRESESTSQE 240

[Close]

BLAST of Carg04203 vs. NCBI nr
Match: XP_023528585.1 (uncharacterized protein LOC111791465 [Cucurbita pepo subsp. pepo] >XP_023528586.1 uncharacterized protein LOC111791465 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.8 bits (351), Expect = 9.6e-30
Identity = 111/255 (43.53%), Postives = 134/255 (52.55%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQL 60
           M RARAS+SRFS R        FCSK  I TN NSNN  ING ++VESD  SY EA KQL
Sbjct: 1   MFRARASFSRFSKRLKQFQTSPFCSKSRIGTNKNSNNGEINGINKVESDFSSYKEAYKQL 60

Query: 61  NNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF------------------ 120
           +NL+FM +S  L    P+K+  GI F      ++   SLA++                  
Sbjct: 61  DNLDFMTASKILFTEPPKKKEFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEADLE 120

Query: 121 ----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKK 180
                                         VKTRL K   TIKEIA+ESRKQSGS  + K
Sbjct: 121 LKKKKEEETAKQIKLEEREEIHDKNQELQEVKTRLYKXXXTIKEIAVESRKQSGSGIVTK 180

Query: 181 NSEKE--VDKTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKD 192
           NSEK   VDKTKHG N +          SKSM+ HL G+KIV APV PK RA+  T+ +D
Sbjct: 181 NSEKAQGVDKTKHGANIDP---------SKSMDDHLGGQKIVPAPVLPKSRAS--TTGED 240

[Close]

BLAST of Carg04203 vs. TrEMBL
Match: tr|A0A0A0KTR7|A0A0A0KTR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006500 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37
Identity = 117/257 (45.53%), Postives = 143/257 (55.64%), Query Frame = 0


Query: 1   MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQL 60
           M RARASWS FS        RSFCSK HI TN +SNN +INGD++VE DL SYNEA KQL
Sbjct: 1   MFRARASWSSFSKRLKPLETRSFCSKSHIQTNKSSNNGKINGDNKVEPDLSSYNEAYKQL 60

Query: 61  NNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF------------------ 120
           +NL+ M +S  L     +K+  G+ F      ++   SLA++                  
Sbjct: 61  DNLDLMTASKILFTQPSKKKKFGLDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEAXXX 120

Query: 121 -----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIK 180
                                          VKTRLDKLE TIKEIA+ESRKQSG+ +I 
Sbjct: 121 XXXXXXXXXXXXXXXXXXXEKIHEMNPELQEVKTRLDKLENTIKEIAVESRKQSGTGNIT 180

Query: 181 KNSEKEVD--KTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRK 193
           KNSEK  D  KTKHG N ++         +KSM+ HL G+KIV APV PKGR +E T+R 
Sbjct: 181 KNSEKGEDAVKTKHGVNIDS---------TKSMDDHLGGQKIVPAPVLPKGRVSESTTRD 240

[Close]

BLAST of Carg04203 vs. TrEMBL
Match: tr|A0A1S3BZ75|A0A1S3BZ75_CUCME (uncharacterized protein LOC103494654 OS=Cucumis melo OX=3656 GN=LOC103494654 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 114/257 (44.36%), Postives = 142/257 (55.25%), Query Frame = 0


Query: 1   MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQL 60
           M RARASWS FS        RSFCSK HI TN +SNN +INGD++V+ DL SY+EA KQL
Sbjct: 1   MFRARASWSSFSKRLKPLETRSFCSKPHIQTNKSSNNGKINGDNKVDPDLSSYHEAYKQL 60

Query: 61  NNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF------------------ 120
           +NL+FM +S  L     +K+  G+ F      ++   SLA++                  
Sbjct: 61  DNLDFMTASKILFTQPSKKKKFGLDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEAXXX 120

Query: 121 -----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIK 180
                                          VKTRLDKLE+TIKEIA+ESRKQSG+ +I 
Sbjct: 121 XXXXXXXXXXXXXXXXXXXEKIHEMNPELQEVKTRLDKLEKTIKEIAVESRKQSGTGNIT 180

Query: 181 KNSEKEVD--KTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRK 193
           KNSEK  D  KTKHG N +          +KSM+ HL G+KIV APV PK  A+E T+R+
Sbjct: 181 KNSEKGEDAVKTKHGVNIDP---------TKSMDDHLGGQKIVPAPVLPKDCASESTTRE 240

[Close]

BLAST of Carg04203 vs. TrEMBL
Match: tr|A0A2P5RYQ4|A0A2P5RYQ4_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD11114 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 77/224 (34.38%), Postives = 111/224 (49.55%), Query Frame = 0


Query: 1   MIRARASWSRFS----NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNL 60
           M RAR+  +RFS     R FCS      N   NN  I  D ++ES++ ++NE+ +QL+NL
Sbjct: 1   MFRARSICARFSTHFKTRPFCSSIKDGKNKKKNNIDI-VDGKIESNVSTFNESYRQLDNL 60

Query: 61  NFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF----------------NGVKT 120
           +F+ ++  L    P+K+  G+ F      +    SLA++                  VK 
Sbjct: 61  DFLTAAKILFTHPPKKKKFGLDFHLVQLFFACMPSLAVYLVAQYARYEMRKMEALFEVKR 120

Query: 121 RLDKLEETIKEIAIESRKQSGSDSIKKN---SEKEVDKTKHGENTNASSMGNAPELSKSM 180
           RL KLEE +KEIA+ES+KQS     K     SE   DK+K  E+++++ + +     KS 
Sbjct: 121 RLGKLEEAVKEIAVESKKQSAVSITKTQQNASEPGEDKSK-SESSSSAVVQDKAIKQKST 180

Query: 181 NIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR 193
               + +   A  V P   A    SRKD K EN  GG S DAKR
Sbjct: 181 GQIPNADPSNARSVSPDSDA----SRKDQKGENQIGGPSQDAKR 218

[Close]

BLAST of Carg04203 vs. TrEMBL
Match: tr|A0A1Q3BX02|A0A1Q3BX02_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_15866 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05
Identity = 73/255 (28.63%), Postives = 106/255 (41.57%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFM 60
           M RAR +W RFSNR  F     + T NN+N      D+++ S L  Y +  +QL+NL+FM
Sbjct: 1   MFRARPTWLRFSNRLKFIQSKPLCTTNNNN------DNKIHSSLSKYEQQYRQLDNLDFM 60

Query: 61  ISSLNL----PRKRNLG-----IHFSYLSSSSLALF------------------------ 120
            +S  L    P+K+  G     + F +    SLA++                        
Sbjct: 61  SASNILFTDPPKKKKFGFDFHLVQFFFACLPSLAVYLVAQYARREMKKMDAXXXXXXXXX 120

Query: 121 -----------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE 180
                                    VK RLDKLEE +KEI +E +KQSG  SI K+ E  
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXPQTAEVKVRLDKLEEAVKEIVVEWKKQSGG-SITKDQEDG 180

Query: 181 VDKTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTS-------RKD 192
            +K   G +    S+  +    +   +  + E +   P   +G+  EC S       R+D
Sbjct: 181 NEKKHVGASELDKSVPESSNYVEKDQLS-TQESVEVTPSLNQGK--ECRSAPVPNSLRQD 240

[Close]

BLAST of Carg04203 vs. TrEMBL
Match: tr|A0A1U8I6W0|A0A1U8I6W0_GOSHI (protein MNN4-like OS=Gossypium hirsutum OX=3635 GN=LOC107891627 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05
Identity = 77/258 (29.84%), Postives = 111/258 (43.02%), Query Frame = 0


Query: 1   MIRARASWSRFS----NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNL 60
           M RAR+  +RFS     R FCS      N   NN  I  D ++ES++ ++NE+ +QL+NL
Sbjct: 1   MFRARSICARFSTHFKTRPFCSSIKDGKNKKKNNIDI-VDGKIESNVSTFNESYRQLDNL 60

Query: 61  NFMISSLNL----PRKRNLGIHFS-----YLSSSSLALF--------------------- 120
           +F+ ++  L    P+K+  G+ F      +    SLA++                     
Sbjct: 61  DFLTAAKILFTHPPKKKKFGLDFHLVQLFFACMPSLAVYLVAQYARYEMRKMEXXXXXXX 120

Query: 121 -----------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIK 180
                                          VK RL KLEE +KEIA+ES+KQS     K
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEVKRRLGKLEEAVKEIAVESKKQSAVSITK 180

Query: 181 KN---SEKEVDKTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSR 193
                SE   DK+K  E+++++ + +     KS     + +   A  V P   A    SR
Sbjct: 181 TQQNASEPGEDKSK-SESSSSAVVQDKAIKQKSTGQIPNADPSNARSVSPDSDA----SR 240

The following BLAST results are available for this feature:

BLAST of Carg04203 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152172.1	2.8e-37	45.53	PREDICTED: uncharacterized protein LOC101207869 [Cucumis sativus] >KGN52943.1 hy...	[more]
XP_008454169.1	2.2e-34	44.36	PREDICTED: uncharacterized protein LOC103494654 [Cucumis melo]	[more]
XP_022956225.1	3.2e-33	45.70	uncharacterized protein LOC111457985 [Cucurbita moschata] >XP_022956226.1 unchar...	[more]
XP_022153425.1	6.0e-32	44.75	uncharacterized protein LOC111020934 [Momordica charantia]	[more]
XP_023528585.1	9.6e-30	43.53	uncharacterized protein LOC111791465 [Cucurbita pepo subsp. pepo] >XP_023528586....	[more]

BLAST of Carg04203 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg04203 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg04203 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTR7\|A0A0A0KTR7_CUCSA	1.8e-37	45.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006500 PE=4 SV=1	[more]
tr\|A0A1S3BZ75\|A0A1S3BZ75_CUCME	1.5e-34	44.36	uncharacterized protein LOC103494654 OS=Cucumis melo OX=3656 GN=LOC103494654 PE=...	[more]
tr\|A0A2P5RYQ4\|A0A2P5RYQ4_GOSBA	2.1e-09	34.38	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD11114 PE=4 SV...	[more]
tr\|A0A1Q3BX02\|A0A1Q3BX02_CEPFO	1.4e-05	28.63	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_15866 PE=4...	[more]
tr\|A0A1U8I6W0\|A0A1U8I6W0_GOSHI	1.9e-05	29.84	protein MNN4-like OS=Gossypium hirsutum OX=3635 GN=LOC107891627 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04203-RA	Carg04203-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..192
None	No IPR available	PANTHER	PTHR36339	FAMILY NOT NAMED	coord: 86..178 coord: 1..76

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04203	Cla012753	Watermelon (97103) v1	carwmB0192
Carg04203	Csa4G006500	Cucumber (Chinese Long) v2	carcuB0226
Carg04203	MELO3C017835	Melon (DHL92) v3.5.1	carmeB0210
Carg04203	ClCG07G012140	Watermelon (Charleston Gray)	carwcgB0199
Carg04203	CSPI04G02060	Wild cucumber (PI 183967)	carcpiB0233
Carg04203	Cucsa.095950	Cucumber (Gy14) v1	carcgyB0235
Carg04203	CmaCh01G001750	Cucurbita maxima (Rimu)	carcmaB0278
Carg04203	CmaCh14G013810	Cucurbita maxima (Rimu)	carcmaB0276
Carg04203	CmoCh01G001830	Cucurbita moschata (Rifu)	carcmoB0285
Carg04203	CmoCh14G014190	Cucurbita moschata (Rifu)	carcmoB0283
Carg04203	Lsi07G004090	Bottle gourd (USVL1VR-Ls)	carlsiB182
Carg04203	Cp4.1LG02g15160	Cucurbita pepo (Zucchini)	carcpeB0285
Carg04203	Cp4.1LG03g13560	Cucurbita pepo (Zucchini)	carcpeB0287
Carg04203	CsGy4G001990	Cucumber (Gy14) v2	carcgybB0215
Carg04203	MELO3C017835.2	Melon (DHL92) v3.6.1	carmedB0215
Carg04203	CsaV3_4G002020	Cucumber (Chinese Long) v3	carcucB0230
Carg04203	Cla97C07G138880	Watermelon (97103) v2	carwmbB0205
Carg04203	Bhi01G002815	Wax gourd	carwgoB0250

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04203	Carg06535	Silver-seed gourd	carcarB139

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04203	Silver-seed gourd	carcarB239
Carg04203	Cucurbita maxima (Rimu)	carcmaB0273
Carg04203	Cucurbita maxima (Rimu)	carcmaB0277
Carg04203	Cucurbita moschata (Rifu)	carcmoB0280
Carg04203	Cucurbita moschata (Rifu)	carcmoB0284
Carg04203	Cucurbita pepo (Zucchini)	carcpeB0280
Carg04203	Cucurbita pepo (Zucchini)	carcpeB0292
Carg04203	Wild cucumber (PI 183967)	carcpiB0236
Carg04203	Bottle gourd (USVL1VR-Ls)	carlsiB179
Carg04203	Watermelon (Charleston Gray)	carwcgB0197
Carg04203	Watermelon (Charleston Gray)	carwcgB0201
Carg04203	Watermelon (97103) v1	carwmB0189
Carg04203	Watermelon (97103) v1	carwmB0193
Carg04203	Watermelon (97103) v2	carwmbB0207
Carg04203	Watermelon (97103) v2	carwmbB0209