CSPI04G02060 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATGTTTCGCGCCAGAGCCAGTTGGAGTTCATTTTCAAAGCGATTGAAGCCATTGGAAACCAGATCATTTTGCTCCAAATCCCACATTCAAACCAACAAGAGCAGCAACAACGGCAAGATCAATGGCGACAACAAGGTTGAACCGGATCTGAGCAGCTACAACGAGGCGTACAAGCAGCTGGATAACTTGGACCTCATGACCGCCTCCAAGATCCTCTTCACTCAACCTTCCAAGAAAAAGAAATTTGGGTATCACTTTCTATTCTCTATCTTCTTATTTCATGTCTGTTTTGGTCGGTTCTACACTTTGAGTGGCTTTTGGTTCTTCAAGTTACTTGGGGCATTTTATCAAACATGTTGTGTTCACATCGGTAGTATGTAATTGAATCCTGTGGGCATCGTTGTATGCTTGTTTACATTTTAATACATTAGTTAAAATTGAATTTTCAATAGTAATGCATCGTGTTGTTCGTTTATAATGCTTAATTATAAGACGTGTGTGATGATTTGTCCTTTTAGGATTAAATTTTGTTCAAAATCCATGTCTTTCTGCTGATTTTATCTCCTTGTTATCAACATATATGTATTTAACATCTTTCTTTCATTCTCAGGCTTGATTTCCATCTTGTGCAACTCTTCTTTGTTTGTATGCCGTCTTTGGGTGAGTACCTTTATCTTTCTCTCTATATTAATTCCGTGTTTGGCTAGAGACATTATACGTGTCTTAATTATTTGCTTAAATGCACCCATTTCCTGAAACAGCTGTGTATCTGGTGGCCCAGTACGCTCGTTACGAAATGAGAAAGATGGAAGCGGTAGGTAAATTTCAGGGCCTCATTTTAAAATTTCCTAAGTTGACATTCTGCGTTTACTGGTTTATGTTTCCTTTAGTCGTTTTTTTCTGAAGACATTTGATTTCATAATTTGACGTTTTCACCTGATACTGTTTTCGTAGTTTGATCCGTCTTCCATTTCTTGGTTTACGTTCCTTGTATTCTGATATTTCAATTGAATTCATCACTGAAGCAACCAGCTTTAATTTGTTTCACATAAAACATTTATTTATTACTCTGCACAACACAACGTTCACAGTTGACAACTAAGGTGTTCTCATTCCCATACATATTTGTAGTCATGGATGCAAAACTTCACATTGAGGATTGTAGTTATTTTAATTGTGTCACTATAGTTCCAGTTGGGGCTCATTTTTTTCTATTTCCGTAAGTAACTATTACAAATATAGCAATTAGATCCAAAGTATTGTCATATTTGATAATATTTTTAAAAAATTGCAAATACAGTGAAGTTTGTCAGAGTTTATTAACGATAAGAGTCTATCACTGATAGACTATATTGTAAATATTGGTTATTGGTCTATCACTAATAGGTCATAAAAGTCTATAAGCGATAGAAGTATATCGTTGATAAATTTTGCTATATTTGCAATTTTTTTAAAATGTTGCTATACTCTTGGTTATTATTCCTAAAATTGCCACCTATTATAATTACCCAACCTGTAATATAGGTTTTTGTTTGGATTCCTTTTGTTGGCACTAGGGGTTTCCTTCTTGTAGGACTGTTTTGATTCCCTTCATTTTACCTTCTCAGTGAAAGTTTGGTTCGTCACAAAAATGTAATTGGTCAATAAGGCACTTACCTTAGCTTCGGCCACTTTAGGAGTATTTTTTTGTATGCTCTTATATTCTTTAATTTTTTTTGTTGTTTCTATAAAAAATTTATATAGCGTTAAGTTTTAAGAGGTCTTTTCTCGTGAAAAGGAAAAAGTTTTAAGAGGTATTTATGTCAAGTATTAGTATGTTAATATGAATATTTTCTTTCGTGTAATTTAGAATATCATAGCTAATTACCAGTTTAAGAGTTCGTTTATATACATTCTTCTGAAATTTGTTTCAGAAATTGTTAATTTAAAAAATGTATAGAAATTGTTAATTTAAAAAATAGAAAGAAGCACATGAAAATAGCAAATTTTGGTTTTATTTTCTGCGTCTTTTTTAACACTTGGAACAAACTATCTTACCGTATACGTTTTCTAACTCAGAAAATTATTATTATTAATATATAAAGATAGATGGTGGATATCAAATATGTGTTTGAAACAATGTTTTAAGTTTTCATGATTAGAATTTTTTTAATTAGATAGCAATGCAAGTGTTGAAATGACTGCATCATCATTCTGTCTTTTAAATCAAGATTAGTAGTCTCTATTTTTATGTTTGGCATCTTATACTTCATTTTTGAAGTTCAACTTTTTGAGACTTTGGTGTTAGATTATAAATTATGGTAACTAGCAGTTTTCTTAAAATTAGACTGGTGGTTTCAAGAGTGATTTTGTGCTAGAAGTTTCAACAGATTCATTTGGTAACAACCTAGTGAATAAATTTAAGACTGTGGAAAGTTGGAAAGCCAAATATTCACAACTTTATATCTTTGTTGATTTCATTCAATTAGTTTAGTTCAGTACGTAGCGGCCTTAACTTCTGTAACAGGTTAGCTCTAGTAACTATTTGATAAGTGTTATCCTCGGGCTTCTAGGTACTCTGTCTAACGTTTACAGAGTGGTCATGCTGTCTGTATAAGATGGCAAGCAAAGAACACCTTTTTTTTAACAGAAATAAATAAATGACTTGTTGATAAAAAGATAGAGTTCAAGTGCTTTCAATTGTCTTAGAGAAGAAGGAACAAGTTAGAAGGTTAAATGAAATATTTCAAACTTTTGAACATTTGAAATTATAGATTGAAATTATAGATGTTAAACAACCTAGAAGTAGGTCATATAATTTTTTTTTGTTTAATTAGATATAAATCTAATTTAAGAGATGAAATGACTGCATCATCATTTTGTCTGCTAGATCATAATTAGTAGTTGTATTGTATGAGCACAACGGGAACCTCCCACCTATCTTCATAATGGTATGATAGTCTACTTTGTACATGGAGTCTCATGGCTTTGTTTCTGTAACCACTCCAAAAGGCCTCATGACTTCGAGTTACTTTCTCTATCATTTATAAAATGGTTACAAGGAATCTGTTTCTGCATAAAATGGAAAGAAAAATAACTATATACTATATATGTGCATACTTTTTAAAAACGAGGCAAAGGAAGATAACAATGCTTCCCATGGGAATTTGGATACTCAAGTTTTCCATTGGTTCTTTGATTTGGCCCCTTAACAATATTTTTCTGTGATTTTCAGTTATTCAATGGTTTTCTTAACCAAAGTCACTATATCAGGACCTGGAGCTGAAAAAGAAGAAAGAAGAAGAAGAGAAAGCAAAACAAATAGAGTTGGAAGAGACTGAAAAAATTCATGAAATGAACCCAGAGCTTCAGGAGGTAAAAACAAGACTCGATAAACTTGAGAATACTATAAAGGAAATTGCTGTTGAATCCAGAAAACAATCAGGGACTGGTAATATAACAAAGAACTCTGAAAAGGGTGAAGATGCTGTTAAAACCAAACATGGGGTAAATATTGATTCAACCAAGTCTATGGATGATCATCTTGGTGGACAAAAAATAGTACCGGCTCCAGTTTTGCCCAAAGGTCGTGTTAGTGAGTCTACAACACGAGATGATAGTAAGCATCGTAACCACGGTGGAGGATCCTCTCCAGATGCTGAGAGATGAGGAAAGCGCCTCTTAATCAATATTACTGCCATATCCTGCGCATGGTAATTTTCCTTTGGTGAAGCTAGAGAAACGAGAGTGAGCCATGTTGCTGCCAAGAATCCAATGGTTCCAGGTTTTGTTAATAATTATATATGGTGAGGCTGTATCTTTGATCATTAGCAATGTAAATGGTTAATAGGTAAACGGATCCATGCCTATTTTGTTATGACAATTAATTACCTCATGATTAACATTCAATTTCTGTTTGTGTTGTGTAAATGTACCCAGCTACAAAGCAATTCTTCTCTCTTTTCCCCCTCTTTGAGATATTATTCAAGGAGGTTGCCACGATGTGATTGACAATTGACAATTTTTG ATGTTTCGCGCCAGAGCCAGTTGGAGTTCATTTTCAAAGCGATTGAAGCCATTGGAAACCAGATCATTTTGCTCCAAATCCCACATTCAAACCAACAAGAGCAGCAACAACGGCAAGATCAATGGCGACAACAAGGTTGAACCGGATCTGAGCAGCTACAACGAGGCGTACAAGCAGCTGGATAACTTGGACCTCATGACCGCCTCCAAGATCCTCTTCACTCAACCTTCCAAGAAAAAGAAATTTGGGCTTGATTTCCATCTTGTGCAACTCTTCTTTGTTTGTATGCCGTCTTTGGCTGTGTATCTGGTGGCCCAGTACGCTCGTTACGAAATGAGAAAGATGGAAGCGGACCTGGAGCTGAAAAAGAAGAAAGAAGAAGAAGAGAAAGCAAAACAAATAGAGTTGGAAGAGACTGAAAAAATTCATGAAATGAACCCAGAGCTTCAGGAGGTAAAAACAAGACTCGATAAACTTGAGAATACTATAAAGGAAATTGCTGTTGAATCCAGAAAACAATCAGGGACTGGTAATATAACAAAGAACTCTGAAAAGGGTGAAGATGCTGTTAAAACCAAACATGGGGTAAATATTGATTCAACCAAGTCTATGGATGATCATCTTGGTGGACAAAAAATAGTACCGGCTCCAGTTTTGCCCAAAGGTCGTGTTAGTGAGTCTACAACACGAGATGATAGTAAGCATCGTAACCACGGTGGAGGATCCTCTCCAGATGCTGAGAGATGA ATGTTTCGCGCCAGAGCCAGTTGGAGTTCATTTTCAAAGCGATTGAAGCCATTGGAAACCAGATCATTTTGCTCCAAATCCCACATTCAAACCAACAAGAGCAGCAACAACGGCAAGATCAATGGCGACAACAAGGTTGAACCGGATCTGAGCAGCTACAACGAGGCGTACAAGCAGCTGGATAACTTGGACCTCATGACCGCCTCCAAGATCCTCTTCACTCAACCTTCCAAGAAAAAGAAATTTGGGCTTGATTTCCATCTTGTGCAACTCTTCTTTGTTTGTATGCCGTCTTTGGCTGTGTATCTGGTGGCCCAGTACGCTCGTTACGAAATGAGAAAGATGGAAGCGGACCTGGAGCTGAAAAAGAAGAAAGAAGAAGAAGAGAAAGCAAAACAAATAGAGTTGGAAGAGACTGAAAAAATTCATGAAATGAACCCAGAGCTTCAGGAGGTAAAAACAAGACTCGATAAACTTGAGAATACTATAAAGGAAATTGCTGTTGAATCCAGAAAACAATCAGGGACTGGTAATATAACAAAGAACTCTGAAAAGGGTGAAGATGCTGTTAAAACCAAACATGGGGTAAATATTGATTCAACCAAGTCTATGGATGATCATCTTGGTGGACAAAAAATAGTACCGGCTCCAGTTTTGCCCAAAGGTCGTGTTAGTGAGTCTACAACACGAGATGATAGTAAGCATCGTAACCACGGTGGAGGATCCTCTCCAGATGCTGAGAGATGA
BLAST of CSPI04G02060 vs. TrEMBL
Match: A0A0A0KTR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006500 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 4.2e-129 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
BLAST of CSPI04G02060 vs. TrEMBL
Match: A0A0B0PEY4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03967 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 3.8e-45 Identity = 136/261 (52.11%), Postives = 164/261 (62.84%), Query Frame = 1
BLAST of CSPI04G02060 vs. TrEMBL
Match: A0A0D2RTK2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G107100 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.9e-45 Identity = 137/258 (53.10%), Postives = 168/258 (65.12%), Query Frame = 1
BLAST of CSPI04G02060 vs. TrEMBL
Match: W9QQI0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013493 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 6.4e-45 Identity = 131/250 (52.40%), Postives = 155/250 (62.00%), Query Frame = 1
BLAST of CSPI04G02060 vs. TrEMBL
Match: A0A067LD20_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27012 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.2e-44 Identity = 122/254 (48.03%), Postives = 166/254 (65.35%), Query Frame = 1
BLAST of CSPI04G02060 vs. TAIR10
Match: AT1G80980.1 (AT1G80980.1 unknown protein) HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35 Identity = 92/190 (48.42%), Postives = 126/190 (66.32%), Query Frame = 1
BLAST of CSPI04G02060 vs. TAIR10
Match: AT1G80700.1 (AT1G80700.1 unknown protein) HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35 Identity = 93/190 (48.95%), Postives = 125/190 (65.79%), Query Frame = 1
BLAST of CSPI04G02060 vs. NCBI nr
Match: gi|449468926|ref|XP_004152172.1| (PREDICTED: uncharacterized protein LOC101207869 [Cucumis sativus]) HSP 1 Score: 468.8 bits (1205), Expect = 6.0e-129 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
BLAST of CSPI04G02060 vs. NCBI nr
Match: gi|659108381|ref|XP_008454169.1| (PREDICTED: uncharacterized protein LOC103494654 [Cucumis melo]) HSP 1 Score: 431.4 bits (1108), Expect = 1.1e-117 Identity = 231/248 (93.15%), Postives = 235/248 (94.76%), Query Frame = 1
BLAST of CSPI04G02060 vs. NCBI nr
Match: gi|728844049|gb|KHG23492.1| (hypothetical protein F383_03967 [Gossypium arboreum]) HSP 1 Score: 189.9 bits (481), Expect = 5.4e-45 Identity = 136/261 (52.11%), Postives = 164/261 (62.84%), Query Frame = 1
BLAST of CSPI04G02060 vs. NCBI nr
Match: gi|823172156|ref|XP_012485035.1| (PREDICTED: histone H3.v1-like [Gossypium raimondii]) HSP 1 Score: 189.5 bits (480), Expect = 7.0e-45 Identity = 137/258 (53.10%), Postives = 168/258 (65.12%), Query Frame = 1
BLAST of CSPI04G02060 vs. NCBI nr
Match: gi|703083287|ref|XP_010092175.1| (hypothetical protein L484_013493 [Morus notabilis]) HSP 1 Score: 189.1 bits (479), Expect = 9.2e-45 Identity = 131/250 (52.40%), Postives = 155/250 (62.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|