Carg03917 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03917
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tail fiber
Location	Cucurbita_argyrosperma_scaffold_011 : 795596 .. 799409 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCGTGGTGTCAACAATGGCAACATCCACGCCATCGTCGTCATCAACAGCATCTAAAAGTTGGATCAGAAATCTTTCATCAATTGCTTCTCGCATCTATTTCTTCCTCATCATTCTCCAGATCCCGCTCTTCAGGTGTGTTTTCAGTTTCTTTACCTTTTTTTTGCACTTCGACAGTTCATATGATTTAGTTACTCGGATGGTAGAACTGTTTAGCACTGAAACTCTTTAGTTAGTTTACTCTCTGCGGTTAGCGTTAAAGTTTTGAGGATTATGTGAGAGTCGTGGCTTGTAACTGTCACTCTGCTGTTTTCTCTTTGTTGATCTTTTTGTTTCTGTTGTATTTCTGTCCTATTTGATCAGACTTTTCCTGTGTTTGAATATCTGATTCTCAGAAACAAACGATCTGTGAAGATTGAATTTCCATAGCTTAACAGTTGACTGTCATTTAACGTGATGTTAGAGCAGGAGATTAGGGTTTAAATCACTTCCTGTCCATGTGAGTAGTTTATGTGTTGTTTTTTTTCTGTGAATTAAAACTAATGTTCGAGGACATACCGGAGGGGAGTGCTTGAGAATGGGATGAAAAGGTTGAATTGATTGAATTTTTGCCATTTCTTTTTTAATTGAATCTTCATGTATGCATTTTATTTGCTTGGTTTCATGCTTGTATCTTCGTTTAGTGATTTGCATATTGCAAGTGATTCCTCTGCGTGGGAATTAATGGAATGGCTGTGTTGAAAGAATGGACCTCAATAGAATCAATATGTAGTATTTGGCTTCTGTTTGAAAATTTTCCATTATCCTTATATCAATGACTGTTGATTTTTTTAACTCCTCTTAGTATCACTTTCATCATCATGTCCTCTGGATATGGTAAGGGAAACTGCCTAATATGGTTGTTTGCTGATATGCTTACGAATCTAGAAATAAACCTTGTGACAAAAAAGAAAATGAATGGCTGGATGTTCTTGCTTTATTTTACTCTTTGCTTCATCGGTTATTAGCTATATATTCCTTCCAACATTCCATACAACAACTTTCCAGTTTTTGGAGTTGTGACTCTTGGCTTGACAATACAATATTTCTTTTCTGCAAATCTTGAAAATCCATGTAGCCTTTGGTGTACGATGTATATGAGCATTACATAATTAAAATCCATGTCCTCTCAGGGTCCCATGCAGATCTGGCATGTGTACAACCCCTTTGCACGTGACTTCATCCCAGTTGATTGCAAGTGAAGTCTTTCCTGCACCCGTAGTTAAGGCACTTCTCTATCCTGGAGCAATTGTGAATGGCCTTGTCATGAATTTGACGGTGCCCAGCTGGAGTAGCTTGTTAGACGTCTATAACTTGACCAATATCAAGGAAGCCTCTGCTATGACTGATCTTCAACGCTTAGAGGTTCCTTTGCTTAACCTCCTTGTTTATTTTTCATTTCAATTTGTAGATTTAGATCTATTATGGTTCTATCTTGGATTCAAGCCCTTATTTTTGCCCGAGAAATGACTGGTTATTTTTAATTTTCTCAACATGGTTAGCTAACAAATACACTTCCTGGGGACCTGGAGTTTCCTTTTTGGGAATCATATGGGAATCTGATAGAACTCCTTTATTCATTCACATAGAGAAGCACATAGCTAAGGGAGAATTCAAGAGCTCCTTACCCCTCCTAAACACCAAGATTTTACCCAAAAAGTGCCCATTTGTTGTGCATATTCTAGACGCTCTCTGATTGCATACCCTTTCTGTCAATCCAACTAAGTAGTTACTTTTAGTCCCACTACATACATACATGCTAAACTCTAAGCCGATCCCTTACTCTCCTATGATTACTTACTATACTATCGGGATCTAGCACCACCCACAGCCCAAATAACAGACGAAGTAGGAATTGTGTATTTGCATTGCAAAGGCAGAGAAACGTACCATTGTTGCATCCACTGTAGATGCATGTTCCCGTCAAATTAGAACCTCCATGACTTTTGGGTCTGATTGTGAAGTTCCCAATGCCTCAGTTGTCTTCCCCACCAATACTATATAAGAAGAGAGACTTGCTGAAAACTCTGGAGAAGTTTTTCCAACATCCTTTCATAATTGGGAGACATGAAAACTGGGTGAACAACGACCATGTTTGCGAAAAACAGATGATAAGCTACTGAGCGAATATTCTCATTAACCTAAAGGGGACCAATGAATCTAGGAGCCAACTTAGGATTTGGATGCGTAACCAATGATTCTTGCAGATTTGGTTTTAACTTAAGATGCATTTGGTAGTTGACTGCAAATTGGACTTCTAGTAGCTTTCCAAGTTGTTGTCATACATTGCTGCTCTTACTGCAATTTCTCCTTCAAGACCTCGGACATGCCATATTTGTTTATTCACACGACCAGGTGCATTGCTAAGGGATAACTTGAGAATTCCTTATCCCTCCTAAACTCCTATTGAGAATTTCTTTGCATCATACGTACATGTATGTAGAATATTTATTGCGTTTCTGGTTAAGAAAATGTTTAGACCGATGAACCAATCATTTCACAGATGAATAAAAGTATTCCACCTTTGCCCTTAAAAGAAAAATAAACAGAACCCCATTCAAACCCTTCTTCTGTTACTTTTCTTCAGAGAGGGCTCGGTAATGCTTTGAATCAACTGGTAAATTAATAACTAGTTACTCAGACAGATGACTTGTCCTTCTACCCAGGTTCTTGCCGGAAGCTATTTTTCAGTGGCTGGAGCCTTTGTGGGTCTTTTGAAGCCCGGAAGGATGAGCATGTTTGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTGCCAAAGCTGTTTATGTTTATCCCACAATGATTATTGCCATGATCTGTGCTTTCTCTTCGGTCAAGTATGATCTGAAGAAGGTAGCAGCTAGAAGTGCCCCTGCTCGACCAATTGCAAAGCCTCTTCAAAGCTCATCAAAATCTAAGCTTAAGTGAGTCGAAATGAAATTTCCTTCTACTGGTTTTATGTTTGATTCTTACTCCTGACCAATCCAAAGATTTTTTAGGCATGTAATTCCCGTTTTCTGGATCTATTAGTTGTGTCGTGATATGCATACACTTTTCTTCCCAGATATTCTTTCCAGCACTCCCTGACTTTCCCAATTTGAATAGGTAGATCTGCATCCATTTGGTTCAATTGTATGAATCAGAAAGAGAACTTTAGTCAAGTTCATCAATTATTGGGTTGGAAAAGACGAACCATTGACGAGATTGAATGGTAAAAAATAATTTTTTAAAAAATCCAATTTGGACAATAATTTAAATGGTTAATAGTTACCATATTACCTTTATCCTACAGGTTTCAAAACTATCATTCAACTTTTCGAATCATACAGGTTTCAAAACTACTCTTCAACTTTTCGAATACTTTTTCGAGTTTGTGATAGCCATTTATTAATTTTTCTTATATTCTACACATGAATTTCTTTATTATATACTTTTTCACATAGTTTTATTTAGCTAAGATTTAACTATTTTCTTAAGAAAGACGGTACTCGAACGTCTACCGACCACATTGGAAGAATTTTTATGGTCTATAATGCATCACGACATTAATATAGGTGATAGAGTTTAAGAGAAGAAGCTCGAGTCATTATATCTCCCCTAGTTGGAGTGTGCTTTGTCATAACATCTCTTTGTGCATAATACTACTAGCTTGCAATGGAATTGGATCTCTCTTTGTTGGTCTTAGTTATGGTTTAGGGTATAGTTGGTGTTATAAATTTAATTGTGATATATATTGG

mRNA sequence

TCTCGTGGTGTCAACAATGGCAACATCCACGCCATCGTCGTCATCAACAGCATCTAAAAGTTGGATCAGAAATCTTTCATCAATTGCTTCTCGCATCTATTTCTTCCTCATCATTCTCCAGATCCCGCTCTTCAGGGTCCCATGCAGATCTGGCATGTGTACAACCCCTTTGCACGTGACTTCATCCCAGTTGATTGCAAGTGAAGTCTTTCCTGCACCCGTAGTTAAGGCACTTCTCTATCCTGGAGCAATTGTGAATGGCCTTGTCATGAATTTGACGGTGCCCAGCTGGAGTAGCTTGTTAGACGTCTATAACTTGACCAATATCAAGGAAGCCTCTGCTATGACTGATCTTCAACGCTTAGAGGTTCTTGCCGGAAGCTATTTTTCAGTGGCTGGAGCCTTTGTGGGTCTTTTGAAGCCCGGAAGGATGAGCATGTTTGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTGCCAAAGCTGTTTATGTTTATCCCACAATGATTATTGCCATGATCTGTGCTTTCTCTTCGGTCAAGTATGATCTGAAGAAGGTAGCAGCTAGAAGTGCCCCTGCTCGACCAATTGCAAAGCCTCTTCAAAGCTCATCAAAATCTAAGCTTAAGTGAGTCGAAATGAAATTTCCTTCTACTGGTTTTATGTTTGATTCTTACTCCTGACCAATCCAAAGATTTTTTAGGCATGTAATTCCCGTTTTCTGGATCTATTAGTTGTGTCGTGATATGCATACACTTTTCTTCCCAGATATTCTTTCCAGCACTCCCTGACTTTCCCAATTTGAATAGGTAGATCTGCATCCATTTGGTTCAATTGTATGAATCAGAAAGAGAACTTTAGTCAAGTTCATCAATTATTGGGTTGGAAAAGACGAACCATTGACGAGATTGAATGGTAAAAAATAATTTTTTAAAAAATCCAATTTGGACAATAATTTAAATGGTTAATAGTTACCATATTACCTTTATCCTACAGGTTTCAAAACTATCATTCAACTTTTCGAATCATACAGGTTTCAAAACTACTCTTCAACTTTTCGAATACTTTTTCGAGTTTGTGATAGCCATTTATTAATTTTTCTTATATTCTACACATGAATTTCTTTATTATATACTTTTTCACATAGTTTTATTTAGCTAAGATTTAACTATTTTCTTAAGAAAGACGGTACTCGAACGTCTACCGACCACATTGGAAGAATTTTTATGGTCTATAATGCATCACGACATTAATATAGGTGATAGAGTTTAAGAGAAGAAGCTCGAGTCATTATATCTCCCCTAGTTGGAGTGTGCTTTGTCATAACATCTCTTTGTGCATAATACTACTAGCTTGCAATGGAATTGGATCTCTCTTTGTTGGTCTTAGTTATGGTTTAGGGTATAGTTGGTGTTATAAATTTAATTGTGATATATATTGG

Coding sequence (CDS)

ATGGCAACATCCACGCCATCGTCGTCATCAACAGCATCTAAAAGTTGGATCAGAAATCTTTCATCAATTGCTTCTCGCATCTATTTCTTCCTCATCATTCTCCAGATCCCGCTCTTCAGGGTCCCATGCAGATCTGGCATGTGTACAACCCCTTTGCACGTGACTTCATCCCAGTTGATTGCAAGTGAAGTCTTTCCTGCACCCGTAGTTAAGGCACTTCTCTATCCTGGAGCAATTGTGAATGGCCTTGTCATGAATTTGACGGTGCCCAGCTGGAGTAGCTTGTTAGACGTCTATAACTTGACCAATATCAAGGAAGCCTCTGCTATGACTGATCTTCAACGCTTAGAGGTTCTTGCCGGAAGCTATTTTTCAGTGGCTGGAGCCTTTGTGGGTCTTTTGAAGCCCGGAAGGATGAGCATGTTTGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTGCCAAAGCTGTTTATGTTTATCCCACAATGATTATTGCCATGATCTGTGCTTTCTCTTCGGTCAAGTATGATCTGAAGAAGGTAGCAGCTAGAAGTGCCCCTGCTCGACCAATTGCAAAGCCTCTTCAAAGCTCATCAAAATCTAAGCTTAAGTGA

Protein sequence

MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMICAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK

Homology

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BLAST of Carg03917 vs. NCBI nr
Match: XP_022951967.1 (uncharacterized protein LOC111454694 [Cucurbita moschata])

HSP 1 Score: 401.0 bits (1029), Expect = 2.6e-108
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATS PSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSMPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLT+IKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTDIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAK VYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKTVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216

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BLAST of Carg03917 vs. NCBI nr
Match: XP_023538499.1 (uncharacterized protein LOC111799258 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 4.9e-107
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSSS   SKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSS---SKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGL+MNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLIMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 213

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BLAST of Carg03917 vs. NCBI nr
Match: XP_023002496.1 (uncharacterized protein LOC111496320 [Cucurbita maxima])

HSP 1 Score: 396.0 bits (1016), Expect = 8.4e-107
Identity = 213/216 (98.61%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           M TST SSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MVTSTQSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYDLKKV ARSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKV-ARSAPARPIAKPLQSSSKSKLK 215

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BLAST of Carg03917 vs. NCBI nr
Match: XP_008445192.1 (PREDICTED: uncharacterized protein LOC103488297 isoform X2 [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKV-VRGAPARPIAKPLQSSSKSKLK 215

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BLAST of Carg03917 vs. NCBI nr
Match: XP_008445193.1 (PREDICTED: uncharacterized protein LOC103488297 isoform X4 [Cucumis melo] >XP_008445194.1 PREDICTED: uncharacterized protein LOC103488297 isoform X5 [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKV-VRGAPARPIAKPLQSSSKSKLK 215

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BLAST of Carg03917 vs. TAIR10
Match: AT5G11280.1 (unknown protein)

HSP 1 Score: 318.9 bits (816), Expect = 2.4e-87
Identity = 156/204 (76.47%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 13  SKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLIASEVFPAPVVKA 72
           SK WI+  +S+AS +YF LI+ QIP     CRSGMC++P+HVTSSQLI+SE+FP P++KA
Sbjct: 7   SKGWIKKWTSMASSVYFVLILFQIPXXXXXCRSGMCSSPIHVTSSQLISSEIFPVPMIKA 66

Query: 73  LLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLAGSYFSVAGAFVG 132
           LLYPGA+VNGL +N+T P W ++LD+YNLTN+KEASA+TDLQRLEVLAGSYFSVAGAFVG
Sbjct: 67  LLYPGAVVNGLAINMTFPKWENVLDIYNLTNVKEASAVTDLQRLEVLAGSYFSVAGAFVG 126

Query: 133 LLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMICAFSSVKYDLKK 192
           LLKPGRMSMFGSLL++WGLVKEGILGKPVNTDPAK VYVYPTM++AMICAFS +KYDL+K
Sbjct: 127 LLKPGRMSMFGSLLLVWGLVKEGILGKPVNTDPAKTVYVYPTMVLAMICAFSMIKYDLRK 186

Query: 193 VAARSAPARPIAKPLQSSSKSKLK 217
            A R+APARPIAKPL SSSKSKLK
Sbjct: 187 -ATRAAPARPIAKPLMSSSKSKLK 209

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BLAST of Carg03917 vs. TAIR10
Match: AT1G80200.1 (unknown protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-19
Identity = 64/215 (29.77%), Postives = 100/215 (46.51%), Query Frame = 0


Query: 12  ASKSWIRNLSSIASRIYFFLIILQIPLFR-----------------------------VP 71
           + K W   +S IAS ++  LI+ QIPLFR                             V 
Sbjct: 4   SKKKWASIISVIASSLFSLLIVFQIPLFRVTLFNNAGALLDLDDRKKTDSILLGIEEIVA 63

Query: 72  CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLT 131
           CR+  C TPL V SS+LIA+                          +PS+  L   Y+  
Sbjct: 64  CRNKSCETPLEVISSELIATXXXXXXXXXXXXXXXXXXXXXXAGSKIPSYHHLFQFYSFD 123

Query: 132 NI-KEASAMTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPV 191
            + + +S  TD+  LEV AGS   + GA + L KP R++  G+LL+ WGL+++ +L    
Sbjct: 124 GMYRTSSFATDIHHLEVFAGSCLCLLGALLNLFKPTRITFIGTLLISWGLIRDILLLDSA 183

Query: 192 N---TDPAKAVYVYPTMIIAMICAFSSVKYDLKKV 194
           +   +    +V VYPT+ +A + AF S++ D++K+
Sbjct: 184 HDWISPHRNSVRVYPTLFLASLSAFLSMRSDVRKI 218

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BLAST of Carg03917 vs. TrEMBL
Match: tr|A0A1S3BCZ0|A0A1S3BCZ0_CUCME (uncharacterized protein LOC103488297 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKV-VRGAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Carg03917 vs. TrEMBL
Match: tr|A0A1S3BC32|A0A1S3BC32_CUCME (uncharacterized protein LOC103488297 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKV-VRGAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Carg03917 vs. TrEMBL
Match: tr|A0A1S4DVJ9|A0A1S4DVJ9_CUCME (uncharacterized protein LOC103488297 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKV-VRGAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Carg03917 vs. TrEMBL
Match: tr|A0A1S3BC26|A0A1S3BC26_CUCME (uncharacterized protein LOC103488297 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 3.5e-101
Identity = 196/215 (91.16%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKL 216
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKL
Sbjct: 181 CAFSSVKYDVKKV-VRGAPARPIAKPLQSSSKSKL 214

[Close]

BLAST of Carg03917 vs. TrEMBL
Match: tr|A0A0A0LMA7|A0A0A0LMA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381640 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 5.9e-101
Identity = 197/216 (91.20%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATST SS+STASKSWIRNLSSIASR+YF LIILQIPLFR+ CRSGMCT+PLHVTSSQLI
Sbjct: 1   MATSTSSSTSTASKSWIRNLSSIASRVYFLLIILQIPLFRISCRSGMCTSPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSNLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 217
           CAFSSVKYD+KKV AR APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKV-ARGAPARPIAKPLQSSSKSKLK 215

The following BLAST results are available for this feature:

BLAST of Carg03917 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951967.1	2.6e-108	98.61	uncharacterized protein LOC111454694 [Cucurbita moschata]	[more]
XP_023538499.1	4.9e-107	98.15	uncharacterized protein LOC111799258 [Cucurbita pepo subsp. pepo]	[more]
XP_023002496.1	8.4e-107	98.61	uncharacterized protein LOC111496320 [Cucurbita maxima]	[more]
XP_008445192.1	1.8e-101	91.20	PREDICTED: uncharacterized protein LOC103488297 isoform X2 [Cucumis melo]	[more]
XP_008445193.1	1.8e-101	91.20	PREDICTED: uncharacterized protein LOC103488297 isoform X4 [Cucumis melo] >XP_00...	[more]

BLAST of Carg03917 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11280.1	2.4e-87	76.47	unknown protein	[more]
AT1G80200.1	2.1e-19	29.77	unknown protein	[more]

BLAST of Carg03917 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03917 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BCZ0\|A0A1S3BCZ0_CUCME	1.2e-101	91.20	uncharacterized protein LOC103488297 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BC32\|A0A1S3BC32_CUCME	1.2e-101	91.20	uncharacterized protein LOC103488297 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DVJ9\|A0A1S4DVJ9_CUCME	1.2e-101	91.20	uncharacterized protein LOC103488297 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BC26\|A0A1S3BC26_CUCME	3.5e-101	91.16	uncharacterized protein LOC103488297 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LMA7\|A0A0A0LMA7_CUCSA	5.9e-101	91.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381640 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03917-RA	Carg03917-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35288	FAMILY NOT NAMED	coord: 8..216
None	No IPR available	PANTHER	PTHR35288:SF1	SUBFAMILY NOT NAMED	coord: 8..216

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03917	Cla022314	Watermelon (97103) v1	carwmB0978
Carg03917	Csa2G380620	Cucumber (Chinese Long) v2	carcuB0987
Carg03917	MELO3C011249	Melon (DHL92) v3.5.1	carmeB0955
Carg03917	ClCG09G002740	Watermelon (Charleston Gray)	carwcgB0951
Carg03917	ClCG08G013220	Watermelon (Charleston Gray)	carwcgB0958
Carg03917	CSPI02G23400	Wild cucumber (PI 183967)	carcpiB1010
Carg03917	Cucsa.162350	Cucumber (Gy14) v1	carcgyB1091
Carg03917	CmaCh12G003280	Cucurbita maxima (Rimu)	carcmaB1349
Carg03917	CmoCh17G008180	Cucurbita moschata (Rifu)	carcmoB1313
Carg03917	CmoCh12G002780	Cucurbita moschata (Rifu)	carcmoB1310
Carg03917	CmoCh05G004010	Cucurbita moschata (Rifu)	carcmoB1319
Carg03917	Lsi08G011920	Bottle gourd (USVL1VR-Ls)	carlsiB898
Carg03917	Cp4.1LG12g07730	Cucurbita pepo (Zucchini)	carcpeB1356
Carg03917	Cp4.1LG07g02930	Cucurbita pepo (Zucchini)	carcpeB1368
Carg03917	Cp4.1LG11g03370	Cucurbita pepo (Zucchini)	carcpeB1352
Carg03917	CsGy2G023160	Cucumber (Gy14) v2	carcgybB0960
Carg03917	MELO3C011249.2	Melon (DHL92) v3.6.1	carmedB0961
Carg03917	CsaV3_2G031950	Cucumber (Chinese Long) v3	carcucB1015
Carg03917	Cla97C08G156600	Watermelon (97103) v2	carwmbB1034
Carg03917	Bhi04G000797	Wax gourd	carwgoB1145

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03917	Carg09327	Silver-seed gourd	carcarB168

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03917	Silver-seed gourd	carcarB239
Carg03917	Silver-seed gourd	carcarB529
Carg03917	Silver-seed gourd	carcarB558
Carg03917	Silver-seed gourd	carcarB572
Carg03917	Cucumber (Gy14) v2	carcgybB0961
Carg03917	Cucumber (Gy14) v2	carcgybB0965
Carg03917	Cucumber (Gy14) v1	carcgyB1096
Carg03917	Cucurbita maxima (Rimu)	carcmaB1347
Carg03917	Cucurbita maxima (Rimu)	carcmaB1350
Carg03917	Cucurbita maxima (Rimu)	carcmaB1353
Carg03917	Cucurbita maxima (Rimu)	carcmaB1357
Carg03917	Cucurbita maxima (Rimu)	carcmaB1359
Carg03917	Cucurbita moschata (Rifu)	carcmoB1308
Carg03917	Cucurbita moschata (Rifu)	carcmoB1311
Carg03917	Cucurbita moschata (Rifu)	carcmoB1315
Carg03917	Cucurbita pepo (Zucchini)	carcpeB1354
Carg03917	Cucurbita pepo (Zucchini)	carcpeB1363
Carg03917	Cucurbita pepo (Zucchini)	carcpeB1366
Carg03917	Wild cucumber (PI 183967)	carcpiB1011
Carg03917	Wild cucumber (PI 183967)	carcpiB1016
Carg03917	Cucumber (Chinese Long) v2	carcuB0988
Carg03917	Cucumber (Chinese Long) v2	carcuB0993
Carg03917	Cucumber (Chinese Long) v3	carcucB1016
Carg03917	Cucumber (Chinese Long) v3	carcucB1021
Carg03917	Bottle gourd (USVL1VR-Ls)	carlsiB895
Carg03917	Melon (DHL92) v3.5.1	carmeB0957
Carg03917	Melon (DHL92) v3.6.1	carmedB0963
Carg03917	Watermelon (Charleston Gray)	carwcgB0957
Carg03917	Watermelon (Charleston Gray)	carwcgB0955
Carg03917	Watermelon (97103) v1	carwmB0980
Carg03917	Watermelon (97103) v1	carwmB0982
Carg03917	Watermelon (97103) v2	carwmbB1031
Carg03917	Watermelon (97103) v2	carwmbB1033
Carg03917	Wax gourd	carwgoB1151