Carg09327 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09327
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tail fiber
Location	Cucurbita_argyrosperma_scaffold_018 : 678504 .. 681045 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAACAATGGCAACCTCCGCGCCATCGTCGACATCAACATCATCCACGGGTGGGATCACAAGTCTTTCTCCGGTTCGCATCTCGCATCTATTTCTTCCTTATTATACTTCAAATCCCTCTCTTCAGGTGTGTTTTCATTTTCTTTCCCCCTCTTTTTTCGCACTCTGATAGTAGGAATGTCTACTCGCATTTGTTGTTAGCGTTAAAAATTTTGGATTGTATGAGAGCGATGCCTTGTCAGTATCACTCGCATTCACTTCAGTTCTATCGTTGATAGGATACTTCGGATCTGTACCTTCACTTGTTTGTTGCAGTTGAATATCTGTTCTATTTCATGCGACCTTGTATATGTTTGAATATCTGGTTCTCGTAAAGTAGAATTGTAAAGATTGAATTTCTTTTAGCTGAACCGCTTGTCGTCAGTAACTTCATCTTCATACAAGTAATTTATGTGTTGAGTGTCGTGAATTTAAGACTAATTTGCGAGAAAACTCCGGAGGGGAGTGTGTTGAAGAACAGGATGAAAAGATTGAATAGCTGAAGTTTGTGCCATTTTTTTAAAGAGAATTTTCATTTGAACATCTAAATGCTTTACGCATTTCAAGGTGCTTTCCACTGCTTGCGAATTAATGGCTGTTCCTATTGAAAGAATAATGGATCATGGATCTCAGTCGAATCAACATGTAGTAATTCCATACGTTTGGGATGTTTCCATTATCCTTACATCAATATATACTCCCAATATCCTGTACAACACTTCCTATGATTTAAAGAAGCATAATCTTATGTTTTTTTGTTCAATAATATTTGAATCTGTGATATTTCATTTATGCAAGTTTGGACATCCATATAGCCCTAGGTGTAAAATGGATGTGCACATTACATAACTCAAAATGTGTGTTCTCAGGGTCCCGTGCAGATCTGGCATGTGCACAACCCCCTTTGCACGTAACTTCATCCCAGTTAATTGCAAGTGAAGTCTTTCCTGCGCTTGTCGTTAAGGCACTTCTCTATCCTGGAGCAATTGTAAATGGCCTTGTCACGAACTTGACAGTTCCTAGCTGGAGTAACTTGTTAGACATCTATAATTTGACAACGTGAAGGAAGCCTTCGCTGTTACTGATCTTCAACGCTTAGAGGTTCTTTTGCTTGACCTTCTTGTTTATTTTCAATTCGATTTGTAGAATTTGATCTATCCTATGGGTCTATCCTTGGATTCAGGCCCTTATTTTGGTCAGAAAAATTATGATTTATTTTAAATTTTCTGAACGTGGCTGGCTAACAAGACAAGCTTCCTAGAGTTTCCTTATGGAAAACCATCCGGGAATCTGATAGAACTCCTTTATTTATTCACATAGAGTGGCACATAGCCAAGGGAGAATTTGAGAGCCCCTCAACACCAAGATCTTACCCAAAAAGCACTCATATAGTCTATATTCTAAATGCTCTCTTCTAAATGCGAAGCTGACGCCCATTCTTTCTGATGATTACATACTATACCATTGGAAGCTATCACTATCCGCACGCCAAATAGTGATCCAGGTATACAATACTAGATGAGAGATTTACTCGAGTTGAAAATACTGGAAAAGTATGTCCAACAGCCTTTCTCAATTGGGAGACATGAAAAACTTGTGAGCAACAACCGTGTTTGGAAGATACAGATGATAAGCCACCAAGCCAATATGGTCATTGTAAATCAATAGCTGCATCTGTAGTATTTTCAGTCTATATTAAATGACTTGTCGTTTCAACCCAGGTTCTTGTGGGAAGCTATTTCTCAGTGGCTGGAGCGTTTGTGGGTGCTTTGAAGCCCGAGAGGATGAGCATGTTGGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTTCCAAATCTGCTTATGTTTATCCTACAATGGTTGTTGCCGTTATCTGGGCTTTCTCATTGGTTAATTATGATGTGAAGAAGGCAGTTAGAAGTGCCCCTGTTCGACCCATTGCAAAGCCACTTCAGAGCTCATCAAAATCTAAGCTTAAGTGAGTGGAAGTGTAATTTCGATTCTACAGGTTTTGTTCGATTCTCACTCCAGAAGATTTCATGCATAAATATTCATTTTCTTTATCTATTAGTTGTGTTGTGAATGTGATTTACAACTTCTCAGATATTCTTTGCAGCACTATCAGACTTTTCCAGCTTCGGTAAAACTACATCTGTTTTGGTTCAATTGTATGGATCACAGAGAGGAGTTCCTGTATGGTGATCCTGTCTGGTTCCGTCTTGTCTACAATATTGAAACTAATCAGGTAGGTTCAACTTCATATTAATGCATTCTGAGATGGATTTTTAAGGTACATCAAATAGATTGTTAGATTTATTAGGGAGGCAATTTGCGTTTTATGAAACATTTCAAACTTTTAGAGGCATCTATAAGGATATTTTATACAATAATAATTAAAAAAAACATGGGACAATTGGTATGATCTAAATTTATATTTGGTTAAATTGAACTATAGGACTTGAACTAC

mRNA sequence

GTCAACAATGGCAACCTCCGCGCCATCGTCGACATCAACATCATCCACGGGTGGGATCACAAGTCTTTCTCCGGTTCGCATCTCGCATCTATTTCTTCCTTATTATACTTCAAATCCCTCTCTTCAGGGTCCCGTGCAGATCTGGCATGTGCACAACCCCCTTTGCACGTAACTTCATCCCAGTTAATTGCAAGTGAAGTCTTTCCTGCGCTTGTCGTTAAGGCACTTCTCTATCCTGGAGCAATTGTAAATGGCCTTGTCACGAACTTGACAGAAGCCTTCGCTGTTACTGATCTTCAACGCTTAGAGGTTCTTGTGGGAAGCTATTTCTCAGTGGCTGGAGCGTTTGTGGGTGCTTTGAAGCCCGAGAGGATGAGCATGTTGGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTTCCAAATCTGCTTATGTTTATCCTACAATGGTTGTTGCCGTTATCTGGGCTTTCTCATTGGTTAATTATGATGTGAAGAAGGCAGTTAGAAGTGCCCCTGTTCGACCCATTGCAAAGCCACTTCAGAGCTCATCAAAATCTAAGCTTAATTGTGTTGTGAATGTGATTTACAACTTCTCAGATATTCTTTGCAGCACTATCAGACTTTTCCAGCTTCGAGAGGAGTTCCTGTATGGTGATCCTGTCTGGTTCCGTCTTGTCTACAATATTGAAACTAATCAGGACTTGAACTAC

Coding sequence (CDS)

GTCAACAATGGCAACCTCCGCGCCATCGTCGACATCAACATCATCCACGGGTGGGATCACAAGTCTTTCTCCGGTTCGCATCTCGCATCTATTTCTTCCTTATTATACTTCAAATCCCTCTCTTCAGGGTCCCGTGCAGATCTGGCATGTGCACAACCCCCTTTGCACGTAACTTCATCCCAGTTAATTGCAAGTGAAGTCTTTCCTGCGCTTGTCGTTAAGGCACTTCTCTATCCTGGAGCAATTGTAAATGGCCTTGTCACGAACTTGACAGAAGCCTTCGCTGTTACTGATCTTCAACGCTTAGAGGTTCTTGTGGGAAGCTATTTCTCAGTGGCTGGAGCGTTTGTGGGTGCTTTGAAGCCCGAGAGGATGAGCATGTTGGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTTCCAAATCTGCTTATGTTTATCCTACAATGGTTGTTGCCGTTATCTGGGCTTTCTCATTGGTTAATTATGATGTGAAGAAGGCAGTTAGAAGTGCCCCTGTTCGACCCATTGCAAAGCCACTTCAGAGCTCATCAAAATCTAAGCTTAATTGTGTTGTGAATGTGATTTACAACTTCTCAGATATTCTTTGCAGCACTATCAGACTTTTCCAGCTTCGAGAGGAGTTCCTGTATGGTGATCCTGTCTGGTTCCGTCTTGTCTACAATATTGAAACTAATCAGGACTTGAACTAC

Protein sequence

VNNGNLRAIVDINIIHGWDHKSFSGSHLASISSLLYFKSLSSGSRADLACAQPPLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLTEAFAVTDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAYVYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKLNCVVNVIYNFSDILCSTIRLFQLREEFLYGDPVWFRLVYNIETNQDLNY

Homology

[Close]

BLAST of Carg09327 vs. NCBI nr
Match: XP_008445191.1 (PREDICTED: uncharacterized protein LOC103488297 isoform X1 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 1.5e-62
Identity = 135/174 (77.59%), Postives = 140/174 (80.46%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKLNCVVNVIYNF 211
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKLNC VN IYNF
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKLNCAVNSIYNF 224

[Close]

BLAST of Carg09327 vs. NCBI nr
Match: XP_022131291.1 (uncharacterized protein LOC111004557 [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 1.3e-58
Identity = 130/164 (79.27%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGAIVNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYNLTNVKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP+KS Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKL 201
           VYPTM++AVI AFS V YDVKK VRSAP RPIAKPLQSSSKSKL
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRSAPARPIAKPLQSSSKSKL 214

[Close]

BLAST of Carg09327 vs. NCBI nr
Match: XP_008445192.1 (PREDICTED: uncharacterized protein LOC103488297 isoform X2 [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 1.1e-57
Identity = 128/168 (76.19%), Postives = 134/168 (79.76%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKLNCVV 205
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKL  +V
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKLKVLV 218

[Close]

BLAST of Carg09327 vs. NCBI nr
Match: XP_008445193.1 (PREDICTED: uncharacterized protein LOC103488297 isoform X4 [Cucumis melo] >XP_008445194.1 PREDICTED: uncharacterized protein LOC103488297 isoform X5 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 2.4e-57
Identity = 127/164 (77.44%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKL 201
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKL
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKL 214

[Close]

BLAST of Carg09327 vs. NCBI nr
Match: XP_016900009.1 (PREDICTED: uncharacterized protein LOC103488297 isoform X3 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 2.4e-57
Identity = 127/164 (77.44%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKL 201
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKL
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKL 214

[Close]

BLAST of Carg09327 vs. TAIR10
Match: AT5G11280.1 (unknown protein)

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-58
Identity = 114/164 (69.51%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGL-----------------VTNLTEAFAV 113
           P+HVTSSQLI+SE+FP  ++KALLYPGA+VNGL                 +TN+ EA AV
Sbjct: 45  PIHVTSSQLISSEIFPVPMIKALLYPGAVVNGLAINMTFPKWENVLDIYNLTNVKEASAV 104

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM GSLL++WGLVKEGILGKPVNTDP+K+ Y
Sbjct: 105 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGSLLLVWGLVKEGILGKPVNTDPAKTVY 164

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKL 201
           VYPTMV+A+I AFS++ YD++KA R+AP RPIAKPL SSSKSKL
Sbjct: 165 VYPTMVLAMICAFSMIKYDLRKATRAAPARPIAKPLMSSSKSKL 208

[Close]

BLAST of Carg09327 vs. TAIR10
Match: AT1G80200.1 (unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 7.8e-10
Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 91  TEAFAVTDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVN-- 150
           T +FA TD+  LEV  GS   + GA +   KP R++ +G+LL+ WGL+++ +L    +  
Sbjct: 128 TSSFA-TDIHHLEVFAGSCLCLLGALLNLFKPTRITFIGTLLISWGLIRDILLLDSAHDW 187

Query: 151 -TDPSKSAYVYPTMVVAVIWAFSLVNYDVKKAVR 182
            +    S  VYPT+ +A + AF  +  DV+K +R
Sbjct: 188 ISPHRNSVRVYPTLFLASLSAFLSMRSDVRKIIR 220

[Close]

BLAST of Carg09327 vs. TrEMBL
Match: tr|A0A1S3BC26|A0A1S3BC26_CUCME (uncharacterized protein LOC103488297 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.6e-63
Identity = 135/174 (77.59%), Postives = 140/174 (80.46%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKLNCVVNVIYNF 211
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKLNC VN IYNF
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKLNCAVNSIYNF 224

[Close]

BLAST of Carg09327 vs. TrEMBL
Match: tr|A0A1S3BC32|A0A1S3BC32_CUCME (uncharacterized protein LOC103488297 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.1e-58
Identity = 128/168 (76.19%), Postives = 134/168 (79.76%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKLNCVV 205
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKL  +V
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKLKVLV 218

[Close]

BLAST of Carg09327 vs. TrEMBL
Match: tr|A0A1S3BCZ0|A0A1S3BCZ0_CUCME (uncharacterized protein LOC103488297 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57
Identity = 127/164 (77.44%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKL 201
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKL
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKL 214

[Close]

BLAST of Carg09327 vs. TrEMBL
Match: tr|A0A1S4DVJ9|A0A1S4DVJ9_CUCME (uncharacterized protein LOC103488297 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57
Identity = 127/164 (77.44%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 54  PLHVTSSQLIASEVFPALVVKALLYPGAIVNGLVTNLT-----------------EAFAV 113
           PLHVTSSQLIASEVFPA VVKALLYPGA+VNGLV NLT                 EA AV
Sbjct: 51  PLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAV 110

Query: 114 TDLQRLEVLVGSYFSVAGAFVGALKPERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAY 173
           TDLQRLEVL GSYFSVAGAFVG LKP RMSM G+LLVIWGLVKEGILGKPVNTDP K+ Y
Sbjct: 111 TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVY 170

Query: 174 VYPTMVVAVIWAFSLVNYDVKKAVRSAPVRPIAKPLQSSSKSKL 201
           VYPTM++AVI AFS V YDVKK VR AP RPIAKPLQSSSKSKL
Sbjct: 171 VYPTMILAVICAFSSVKYDVKKVVRGAPARPIAKPLQSSSKSKL 214

[Close]

BLAST of Carg09327 vs. TrEMBL
Match: tr|A0A0A0LMA7|A0A0A0LMA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381640 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 133/198 (67.17%), Postives = 146/198 (73.74%), Query Frame = 0


Query: 27  HLASISSLLYFKSL-------SSGSRADLACAQPPLHVTSSQLIASEVFPALVVKALLYP 86
           +L+SI+S +YF  +           R+ +  +  PLHVTSSQLIASEVFPA VVKALLYP
Sbjct: 19  NLSSIASRVYFLLIILQIPLFRISCRSGMCTS--PLHVTSSQLIASEVFPAPVVKALLYP 78

Query: 87  GAIVNGLVTNLT-----------------EAFAVTDLQRLEVLVGSYFSVAGAFVGALKP 146
           GA+VNGLV NLT                 EA AVTDLQRLEVL GSYFSVAGAFVG LKP
Sbjct: 79  GAVVNGLVMNLTVPSWSNLFDIYNLTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKP 138

Query: 147 ERMSMLGSLLVIWGLVKEGILGKPVNTDPSKSAYVYPTMVVAVIWAFSLVNYDVKKAVRS 201
            RMSM G+LLVIWGLVKEGILGKPVNTDP K+ YVYPTM++AVI AFS V YDVKK  R 
Sbjct: 139 GRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVICAFSSVKYDVKKVARG 198

The following BLAST results are available for this feature:

BLAST of Carg09327 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445191.1	1.5e-62	77.59	PREDICTED: uncharacterized protein LOC103488297 isoform X1 [Cucumis melo]	[more]
XP_022131291.1	1.3e-58	79.27	uncharacterized protein LOC111004557 [Momordica charantia]	[more]
XP_008445192.1	1.1e-57	76.19	PREDICTED: uncharacterized protein LOC103488297 isoform X2 [Cucumis melo]	[more]
XP_008445193.1	2.4e-57	77.44	PREDICTED: uncharacterized protein LOC103488297 isoform X4 [Cucumis melo] >XP_00...	[more]
XP_016900009.1	2.4e-57	77.44	PREDICTED: uncharacterized protein LOC103488297 isoform X3 [Cucumis melo]	[more]

BLAST of Carg09327 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11280.1	5.9e-58	69.51	unknown protein	[more]
AT1G80200.1	7.8e-10	36.17	unknown protein	[more]

BLAST of Carg09327 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg09327 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BC26\|A0A1S3BC26_CUCME	9.6e-63	77.59	uncharacterized protein LOC103488297 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BC32\|A0A1S3BC32_CUCME	7.1e-58	76.19	uncharacterized protein LOC103488297 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BCZ0\|A0A1S3BCZ0_CUCME	1.6e-57	77.44	uncharacterized protein LOC103488297 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DVJ9\|A0A1S4DVJ9_CUCME	1.6e-57	77.44	uncharacterized protein LOC103488297 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LMA7\|A0A0A0LMA7_CUCSA	1.3e-56	67.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381640 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09327-RA	Carg09327-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35288:SF1	SUBFAMILY NOT NAMED	coord: 50..91 coord: 88..200
None	No IPR available	PANTHER	PTHR35288	FAMILY NOT NAMED	coord: 50..91 coord: 88..200

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09327	Cla022314	Watermelon (97103) v1	carwmB0133
Carg09327	Csa2G380620	Cucumber (Chinese Long) v2	carcuB0150
Carg09327	MELO3C011249	Melon (DHL92) v3.5.1	carmeB0143
Carg09327	ClCG08G013220	Watermelon (Charleston Gray)	carwcgB0137
Carg09327	CSPI02G23400	Wild cucumber (PI 183967)	carcpiB0155
Carg09327	Cucsa.162350	Cucumber (Gy14) v1	carcgyB0171
Carg09327	CmaCh12G003280	Cucurbita maxima (Rimu)	carcmaB0183
Carg09327	CmoCh12G002780	Cucurbita moschata (Rifu)	carcmoB0192
Carg09327	CmoCh05G004010	Cucurbita moschata (Rifu)	carcmoB0196
Carg09327	Lsi08G011920	Bottle gourd (USVL1VR-Ls)	carlsiB128
Carg09327	Cp4.1LG07g02930	Cucurbita pepo (Zucchini)	carcpeB0205
Carg09327	Cp4.1LG11g03370	Cucurbita pepo (Zucchini)	carcpeB0199
Carg09327	CsGy2G023160	Cucumber (Gy14) v2	carcgybB0148
Carg09327	MELO3C011249.2	Melon (DHL92) v3.6.1	carmedB0147
Carg09327	CsaV3_2G031950	Cucumber (Chinese Long) v3	carcucB0159
Carg09327	Cla97C08G156600	Watermelon (97103) v2	carwmbB0149
Carg09327	Bhi04G000797	Wax gourd	carwgoB0176

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09327	Carg03917	Silver-seed gourd	carcarB168

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09327	Wax gourd	carwgoB0182
Carg09327	Silver-seed gourd	carcarB165
Carg09327	Cucumber (Gy14) v2	carcgybB0153
Carg09327	Cucumber (Gy14) v1	carcgyB0174
Carg09327	Cucurbita maxima (Rimu)	carcmaB0186
Carg09327	Cucurbita maxima (Rimu)	carcmaB0189
Carg09327	Cucurbita pepo (Zucchini)	carcpeB0203
Carg09327	Wild cucumber (PI 183967)	carcpiB0160
Carg09327	Cucumber (Chinese Long) v2	carcuB0155
Carg09327	Cucumber (Chinese Long) v3	carcucB0163
Carg09327	Bottle gourd (USVL1VR-Ls)	carlsiB126
Carg09327	Melon (DHL92) v3.5.1	carmeB0145
Carg09327	Melon (DHL92) v3.6.1	carmedB0149
Carg09327	Watermelon (Charleston Gray)	carwcgB0135
Carg09327	Watermelon (Charleston Gray)	carwcgB0136
Carg09327	Watermelon (97103) v1	carwmB0136
Carg09327	Watermelon (97103) v2	carwmbB0148