Carg03695 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03695
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RAB6-interacting golgin
Location	Cucurbita_argyrosperma_scaffold_006 : 1449335 .. 1451261 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGGTTTTGTGGGTAAGGGAATGCAAATTGAATAGAGTGAGGAACAGAGGAAGAGCAGCCATAAATGGTGCAGAACAGCACAGGAAGCTTGAGCTTCAGCAGCCATTTGTGTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAAGCCCAGTTAGGCCGTGTTGAAGAAGAAACCAAACGTCTCGCTTGCATCCGTCAGGTAAAATTTCGGGGTTTTTCCTCCAAAATTTTCATGGGTTTTTCTTAGATTTTGGTTTATGAGACACCCTTTTAACTTTTGTGCTGTGTTTTACATGAATTTGGTGGGTTGGGTTTGGGGGGGAATGGGACATAAAATTATAGAACATCTCTTGAAACTGAGTATAATTTTGGGTAAATCTTCGTCCAAAATCTCTGTGGACAAGGGATTTTTAACCCATTTTGCCTGATTTAGTTCTATTATCTACGGCGTTTGGGATTAAATTAATATGTTGTGAAGGGATTAGAAGCGGCTCAAATCATTGTAAATGTCCATGATTTCCAACGGCAGGTGCTAACCACATAATCAACAATGCTTTGGTGTCGGTGGGTCGTATGAGTCATTCTATTCTAAGATTAGCTTAACTGGACAAGTAATTATAGAACAAGAGTATGCATGTGTAACGGCTCAAACCCACCACGAGTAGATATTGTCCCATTGGGCTTTCCCTTCCAAGCTTCCCTCAAGGTTTTAAAACGCGTCTACTATAGAGAGGGTCTAGCCTTACTCCCACCCGTGCCGTGCCTTGCACCGTCCGATGGCTAGCTCTAAAACCAATTGTAACAGTCCAAGCCCACTGCTACATTGGGTTTTCCGTTCTTGACTTTCCCTCAAGTTTCTAAAACCAATTGTAACAGTCTATTAGGGAGAGTTTTTCACACCCTTACAAGGAATGTTTCGTTCTCGTTTCGTTGGCCTAGGTAAGAAACAAAAATATGACAATGTATTGGTTTAGAGTTTGGAATTGGTTTTTTGGTGCTCTTGTTGTTTAGTTTCATGAATCAAAGTGTTGCAAACACCAGGAGCTCGAGGCGCTGACCGATCCAATGAGGAAGGAAGTGGCACAGTTTCGTAAGAAGGTCGACGCCGTAAACAAGGAATTGAAGCCTCTGGGACATATCTGTCAAAAGAAGGTAAGATATGGGGGAAGGAATAGCGCATTGCTTAGCATATAAGATGATATTGCATTCTGTGAATCTCAATTATTGAGCTGATGTTTGCATCCTTTGTCATAGGAAAAGGAGTACAGGGAAGCCCTCGAAGCCTTCAACGAAAAGAACAAGGAAAAAGTTCAGCTAATCAACAAACTAATGGAGGTAAATTCCCTCGAATTCCCTTAGTTTTCCACGATTTCGACGCATCAGTTCAGCCACTGTTCGAGGCGACTCGAATGGCCTCCATTAGTTAAAAACTGCGTTTCTTTTCGTGTATTCTCGTCTGAGTTTCGGTTGATGGATTGATTTGGTTTTTCGACGAGCAGCTGGTGAGCGAAAGCGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATCGATACGATTCGATAACCGTATCGTTTGAATGATCAGAACGACGGTTGACAAAGTGATAACCCTGTGTTTATTAGGTTTTGGCGTGTGATGTATTTAATCTAAAGAACAAAAAGGAGCTGTGTTTGTGTATTAGTTGAAATGTTGGCGTTCCCTTTGTTTGTGTGTAATTTTCATAATTTGTCTTTCTTTATTTATTTTTCCTCTTCAGGAGTTAACTCAAAAAACATTTTAACTCATTTTAGGAAAGGAAATGACTTATCTATCCTTTTGTTTT

mRNA sequence

GAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGGTTTTGTGGGTAAGGGAATGCAAATTGAATAGAGTGAGGAACAGAGGAAGAGCAGCCATAAATGGTGCAGAACAGCACAGGAAGCTTGAGCTTCAGCAGCCATTTGTGTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAAGCCCAGTTAGGCCGTGTTGAAGAAGAAACCAAACGTCTCGCTTGCATCCGTCAGGAGCTCGAGGCGCTGACCGATCCAATGAGGAAGGAAGTGGCACAGTTTCGTAAGAAGGTCGACGCCGTAAACAAGGAATTGAAGCCTCTGGGACATATCTGTCAAAAGAAGGAAAAGGAGTACAGGGAAGCCCTCGAAGCCTTCAACGAAAAGAACAAGGAAAAAGTTCAGCTAATCAACAAACTAATGGAGCTGGTGAGCGAAAGCGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATCGATACGATTCGATAACCGTATCGTTTGAATGATCAGAACGACGGTTGACAAAGTGATAACCCTGTGTTTATTAGGTTTTGGCGTGTGATGTATTTAATCTAAAGAACAAAAAGGAGCTGTGTTTGTGTATTAGTTGAAATGTTGGCGTTCCCTTTGTTTGTGTGTAATTTTCATAATTTGTCTTTCTTTATTTATTTTTCCTCTTCAGGAGTTAACTCAAAAAACATTTTAACTCATTTTAGGAAAGGAAATGACTTATCTATCCTTTTGTTTT

Coding sequence (CDS)

ATGGTGCAGAACAGCACAGGAAGCTTGAGCTTCAGCAGCCATTTGTGTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAAGCCCAGTTAGGCCGTGTTGAAGAAGAAACCAAACGTCTCGCTTGCATCCGTCAGGAGCTCGAGGCGCTGACCGATCCAATGAGGAAGGAAGTGGCACAGTTTCGTAAGAAGGTCGACGCCGTAAACAAGGAATTGAAGCCTCTGGGACATATCTGTCAAAAGAAGGAAAAGGAGTACAGGGAAGCCCTCGAAGCCTTCAACGAAAAGAACAAGGAAAAAGTTCAGCTAATCAACAAACTAATGGAGCTGGTGAGCGAAAGCGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATCGATACGATTCGATAA

Protein sequence

MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNKEKVQLINKLMELVSESERLRLKKLEELSKNIDTIR

Homology

[Close]

BLAST of Carg03695 vs. NCBI nr
Match: XP_022935581.1 (GRB10-interacting GYF protein 2-like [Cucurbita moschata] >XP_023526009.1 GRB10-interacting GYF protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
           XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155

[Close]

BLAST of Carg03695 vs. NCBI nr
Match: XP_022983144.1 (GRB10-interacting GYF protein 2-like [Cucurbita maxima])

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
           X VQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 155

[Close]

BLAST of Carg03695 vs. NCBI nr
Match: XP_004137876.1 (PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_3G751460 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40
Identity = 146/155 (94.19%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLACIR+ELEAL DPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 73  RLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNK 132

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
             VQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Carg03695 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40
Identity = 148/155 (95.48%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLACIR+ELEAL DPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 73  RLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
             VQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Carg03695 vs. NCBI nr
Match: XP_022144720.1 (uncharacterized protein LOC111014340 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 5.4e-39
Identity = 146/155 (94.19%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+ GSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETK
Sbjct: 11  MVQNNQGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETK 70

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLACIR+ELEAL DPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 71  RLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 130

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
             VQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 131 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 165

[Close]

BLAST of Carg03695 vs. TAIR10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 134.4 bits (337), Expect = 5.9e-32
Identity = 122/149 (81.88%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 6   TGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 65
           +GS+SFSS + KEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA I
Sbjct: 29  SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALI 88

Query: 66  RQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQL 125
           R+ELE L DPMR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   VQL
Sbjct: 89  REELEGLADPMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREKVQL 148

Query: 126 INKLMELVSESERLRLKKLEELSKNIDTI 155
           I +LMELV ESE++R+KKLEELSKNID+I
Sbjct: 149 ITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of Carg03695 vs. TAIR10
Match: AT5G03660.1 (Family of unknown function (DUF662) )

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-27
Identity = 74/145 (51.03%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 8   SLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRQ 67
           S+SFSS + KED+E+S  ALS F+AKEEEIE+KKME+RE+VQAQLGRVE+E+KRLA IR+
Sbjct: 25  SMSFSSQMKKEDDELSMKALSAFKAKEEEIEKKKMEIRERVQAQLGRVEDESKRLAMIRE 84

Query: 68  ELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLIN 127
           ELE   DPMRKE                                           V+LI 
Sbjct: 85  ELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTVQKKETEYKDALEAFNEKNKEKVELIT 144

Query: 128 KLMELVSESERLRLKKLEELSKNID 153
           KL EL  ESE+ R KKLEELSKNID
Sbjct: 145 KLQELEGESEKFRFKKLEELSKNID 169

[Close]

BLAST of Carg03695 vs. TAIR10
Match: AT2G27740.1 (Family of unknown function (DUF662) )

HSP 1 Score: 94.4 bits (233), Expect = 6.8e-20
Identity = 73/150 (48.67%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 5   STGSLSF--SSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRL 64
           S+G++S   S  + +++EE+S+SA + F+AKE+EIER+KMEV+++VQ +LG  EE T+RL
Sbjct: 21  SSGNISMNGSPMIDEKEEELSQSAFALFKAKEDEIERRKMEVKDRVQKKLGLAEEATRRL 80

Query: 65  ACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 124
           A IR+ELEALTDPMRKE   XXXXXXXXXX                              
Sbjct: 81  AEIREELEALTDPMRKEISAXXXXXXXXXXELKPLGQSCQRKEREFKEALEAYNEKNKEK 140

Query: 125 VQLINKLMELVSESERLRLKKLEELSKNID 153
              ++KL+ELV+ESE+LR+ KLEELSK+I+
Sbjct: 141 AIFVSKLVELVTESEKLRMTKLEELSKSIE 170

[Close]

BLAST of Carg03695 vs. TAIR10
Match: AT3G52900.1 (Family of unknown function (DUF662) )

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 57/152 (37.50%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 4   NSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA 63
           N+ G L    +   E+EEI + A++ F+A+EEEIERKKM V+EKVQ +LG  EE T+ L 
Sbjct: 16  NTNGKLPMEDN---EEEEIWKVAVTRFQAREEEIERKKMTVKEKVQQRLGFAEEATRCLT 75

Query: 64  CIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 123
              +ELE + DPMRKE                                            
Sbjct: 76  QTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKDTLEAFNEKNKEKA 135

Query: 124 QLINKLMELVSESERLRLKKLEELSKNIDTIR 156
            L++ LMEL++ESERLR+KKLEE++K + T++
Sbjct: 136 HLVSMLMELLAESERLRIKKLEEINKTVGTLQ 164

[Close]

BLAST of Carg03695 vs. TAIR10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 75.1 bits (183), Expect = 4.3e-14
Identity = 83/149 (55.70%), Postives = 95/149 (63.76%), Query Frame = 0


Query: 8   SLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRQ 67
           SLSFSS + KEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLG              
Sbjct: 17  SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGXXXXXXXXXXXXXX 76

Query: 68  ELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLIN 127
                       XXXXXXXXXXXXXXXXXXXXXXX                    VQLI 
Sbjct: 77  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKEREYKEALDTFNEKNREKVQLIT 136

Query: 128 KLME---LVSESERLRLKKLEELSKNIDT 154
           KLME   LV ESE+LRLKKL+ELS++IDT
Sbjct: 137 KLMEMGQLVGESEKLRLKKLDELSRSIDT 165

[Close]

BLAST of Carg03695 vs. TrEMBL
Match: tr|A0A1S3B6L6|A0A1S3B6L6_CUCME (uncharacterized protein LOC103486581 OS=Cucumis melo OX=3656 GN=LOC103486581 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40
Identity = 148/155 (95.48%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLACIR+ELEAL DPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 73  RLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
             VQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Carg03695 vs. TrEMBL
Match: tr|A0A0A0LGI7|A0A0A0LGI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40
Identity = 146/155 (94.19%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLACIR+ELEAL DPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 73  RLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNK 132

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
             VQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Carg03695 vs. TrEMBL
Match: tr|C6TB49|C6TB49_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527015 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35
Identity = 101/155 (65.16%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           +VQNS GSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETK
Sbjct: 11  VVQNS-GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETK 70

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLA IR+ELEAL DPMRKE                                         
Sbjct: 71  RLATIREELEALADPMRKEVALVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNEKNR 130

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTIR 156
             VQLI KLMELVSESERLR+KKLEELSKNID+I+
Sbjct: 131 EKVQLITKLMELVSESERLRMKKLEELSKNIDSIQ 164

[Close]

BLAST of Carg03695 vs. TrEMBL
Match: tr|A0A2P5RIN9|A0A2P5RIN9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD16390 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35
Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQNS GSLSFSSHL KEDEEIS+SALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETK
Sbjct: 1   MVQNS-GSLSFSSHLSKEDEEISKSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETK 60

Query: 61  RLACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLA IR+ELEAL DPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  RLAVIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXVQLINKLMELVSESERLRLKKLEELSKNIDTI 155
             VQLI KLMELVSESE+LR+KKLEELSKNID+I
Sbjct: 121 EKVQLITKLMELVSESEKLRMKKLEELSKNIDSI 153

[Close]

BLAST of Carg03695 vs. TrEMBL
Match: tr|A0A0B0NX29|A0A0B0NX29_GOSAR (RAB6-interacting golgin OS=Gossypium arboreum OX=29729 GN=F383_22701 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 115/153 (75.16%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 2   VQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKR 61
           VQNS GSLSFSSHL KEDEEIS+SALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKR
Sbjct: 16  VQNS-GSLSFSSHLSKEDEEISKSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKR 75

Query: 62  LACIRQELEALTDPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           LA IR+ELEAL DPMRKE XXXXXXXXXXXXXXXX                         
Sbjct: 76  LATIREELEALADPMRKEVXXXXXXXXXXXXXXXXLGHTCQKKEREYKEALEAFNEKNKE 135

Query: 122 XVQLINKLMELVSESERLRLKKLEELSKNIDTI 155
            VQLI KLMELVSESERLR+KKLEELSKNID++
Sbjct: 136 KVQLITKLMELVSESERLRMKKLEELSKNIDSL 167

The following BLAST results are available for this feature:

BLAST of Carg03695 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935581.1	2.7e-43	100.00	GRB10-interacting GYF protein 2-like [Cucurbita moschata] >XP_023526009.1 GRB10-...	[more]
XP_022983144.1	1.4e-42	98.71	GRB10-interacting GYF protein 2-like [Cucurbita maxima]	[more]
XP_004137876.1	3.7e-40	94.19	PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2 [Cucumis sa...	[more]
XP_008442808.1	3.7e-40	95.48	PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]	[more]
XP_022144720.1	5.4e-39	94.19	uncharacterized protein LOC111014340 [Momordica charantia]	[more]

BLAST of Carg03695 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09980.1	5.9e-32	81.88	Family of unknown function (DUF662)	[more]
AT5G03660.1	2.6e-27	51.03	Family of unknown function (DUF662)	[more]
AT2G27740.1	6.8e-20	48.67	Family of unknown function (DUF662)	[more]
AT3G52900.1	1.0e-15	37.50	Family of unknown function (DUF662)	[more]
AT3G52920.1	4.3e-14	55.70	Family of unknown function (DUF662)	[more]

BLAST of Carg03695 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03695 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B6L6\|A0A1S3B6L6_CUCME	2.5e-40	95.48	uncharacterized protein LOC103486581 OS=Cucumis melo OX=3656 GN=LOC103486581 PE=...	[more]
tr\|A0A0A0LGI7\|A0A0A0LGI7_CUCSA	2.5e-40	94.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=4 SV=1	[more]
tr\|C6TB49\|C6TB49_SOYBN	2.4e-35	65.16	Uncharacterized protein OS=Glycine max OX=3847 GN=100527015 PE=2 SV=1	[more]
tr\|A0A2P5RIN9\|A0A2P5RIN9_GOSBA	4.1e-35	91.56	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD16390 PE=4 SV...	[more]
tr\|A0A0B0NX29\|A0A0B0NX29_GOSAR	1.2e-34	75.16	RAB6-interacting golgin OS=Gossypium arboreum OX=29729 GN=F383_22701 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007033	GORAB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03695-RA	Carg03695-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..135
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR21470:SF4	SUBFAMILY NOT NAMED	coord: 11..154
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 7..153 e-value: 1.9E-73 score: 245.4
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	NTKL-BINDING PROTEIN 1	coord: 11..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03695	Cla017717	Watermelon (97103) v1	carwmB0237
Carg03695	Cla018374	Watermelon (97103) v1	carwmB0238
Carg03695	Csa6G450440	Cucumber (Chinese Long) v2	carcuB0278
Carg03695	Csa3G751460	Cucumber (Chinese Long) v2	carcuB0277
Carg03695	MELO3C024522	Melon (DHL92) v3.5.1	carmeB0253
Carg03695	MELO3C009443	Melon (DHL92) v3.5.1	carmeB0251
Carg03695	ClCG04G009830	Watermelon (Charleston Gray)	carwcgB0242
Carg03695	ClCG10G019230	Watermelon (Charleston Gray)	carwcgB0240
Carg03695	CSPI03G34300	Wild cucumber (PI 183967)	carcpiB0281
Carg03695	CSPI06G25270	Wild cucumber (PI 183967)	carcpiB0282
Carg03695	Cucsa.378430	Cucumber (Gy14) v1	carcgyB0297
Carg03695	CmaCh14G002900	Cucurbita maxima (Rimu)	carcmaB0343
Carg03695	CmaCh03G011730	Cucurbita maxima (Rimu)	carcmaB0348
Carg03695	CmaCh06G004560	Cucurbita maxima (Rimu)	carcmaB0350
Carg03695	CmaCh07G008650	Cucurbita maxima (Rimu)	carcmaB0351
Carg03695	CmoCh03G011680	Cucurbita moschata (Rifu)	carcmoB0349
Carg03695	CmoCh07G008980	Cucurbita moschata (Rifu)	carcmoB0352
Carg03695	CmoCh06G004570	Cucurbita moschata (Rifu)	carcmoB0351
Carg03695	CmoCh14G002790	Cucurbita moschata (Rifu)	carcmoB0347
Carg03695	Lsi01G012460	Bottle gourd (USVL1VR-Ls)	carlsiB223
Carg03695	Lsi03G019260	Bottle gourd (USVL1VR-Ls)	carlsiB225
Carg03695	Cp4.1LG08g10340	Cucurbita pepo (Zucchini)	carcpeB0354
Carg03695	Cp4.1LG03g01060	Cucurbita pepo (Zucchini)	carcpeB0353
Carg03695	Cp4.1LG19g03580	Cucurbita pepo (Zucchini)	carcpeB0351
Carg03695	Cp4.1LG10g04100	Cucurbita pepo (Zucchini)	carcpeB0348
Carg03695	CsGy3G032080	Cucumber (Gy14) v2	carcgybB0263
Carg03695	CsGy6G024700	Cucumber (Gy14) v2	carcgybB0264
Carg03695	MELO3C024522.2	Melon (DHL92) v3.6.1	carmedB0263
Carg03695	MELO3C009443.2	Melon (DHL92) v3.6.1	carmedB0261
Carg03695	CsaV3_6G040460	Cucumber (Chinese Long) v3	carcucB0280
Carg03695	CsaV3_3G036960	Cucumber (Chinese Long) v3	carcucB0279
Carg03695	Cla97C10G202330	Watermelon (97103) v2	carwmbB0254
Carg03695	Cla97C04G076650	Watermelon (97103) v2	carwmbB0256
Carg03695	Bhi11G001662	Wax gourd	carwgoB0316
Carg03695	Bhi03G001135	Wax gourd	carwgoB0329

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03695	Carg14517	Silver-seed gourd	carcarB173
Carg03695	Carg10464	Silver-seed gourd	carcarB276
Carg03695	Carg05389	Silver-seed gourd	carcarB293

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03695	Silver-seed gourd	carcarB292
Carg03695	Cucumber (Gy14) v2	carcgybB0265
Carg03695	Cucumber (Gy14) v1	carcgyB0291
Carg03695	Cucumber (Gy14) v1	carcgyB0299
Carg03695	Wild cucumber (PI 183967)	carcpiB0283
Carg03695	Cucumber (Chinese Long) v2	carcuB0279
Carg03695	Cucumber (Chinese Long) v3	carcucB0281
Carg03695	Bottle gourd (USVL1VR-Ls)	carlsiB222
Carg03695	Melon (DHL92) v3.5.1	carmeB0250
Carg03695	Melon (DHL92) v3.6.1	carmedB0260
Carg03695	Watermelon (Charleston Gray)	carwcgB0241
Carg03695	Watermelon (97103) v1	carwmB0239
Carg03695	Watermelon (97103) v2	carwmbB0255
Carg03695	Wax gourd	carwgoB0324
Carg03695	Wax gourd	carwgoB0327