Bhi11G001662 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G001662
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	RAB6-interacting golgin (DUF662)
Location	chr11 : 56208313 .. 56211340 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAGGTGAAGCTGGGTGGGCAGTTTCAAAAGGGCATTGTATTCTATTCTTAGTTTTTTATAAGCACTTCGCAATACCCATAATCCACAGCTGAAAAGAAAAACTGAAATACAGCACAAACCCCATCATTTCAAAAGCAAAAGCAAAAGAAGAGAGAGAGAATACACAAACCCAAGAGAGAGAAAAAGCAACAAACCCAGAAAGAAAGGAAGAAGAAGAAGAAGAAGAACAGAGGAAAATACAAGGAATTTCAAAGAAGAAGAAAAAGGGTTTTGTGGGTTAAGACGATGCAGACCGAACAAGCTCAGCAGCAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCCAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTCTCCACTTTCCGAGCTAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTCAGAGAGAAAGTTCAAGCACAGTTAGGCCGAGTCGAAGAAGAAACCAAACGCCTCGCTTGCATCCGTGAGGTAAGGAGGGAACAAATTTTTTTCACAAGATTTTAGGGGTTTTTACCTCGAAATTTTTCATGAGTTTTTCCTAGATTTCGGTTTTTGAGATACCCTTTAACTTTTCTGCTGCGTTTTACATGAATTTGCTGGGTTGGGTTTGGGGGAAAAGTTGGGTATAAAATTGTAGAAGATCTCTTCAATACTACTGTAATTTTGGGGGAAATCTTTGCCAGAAAGGTCTGAGGACAAGGGGGTTTTAACCCCCTTTTGCATGATTTAGTTCTATTATTTTTGGGGTTTGGGATTAATTTAATGTTTTATCAAGGGATTAGGAGCAGCTTTATGTCAGATTTGTAAGTTTATTTGTGTTATTTTGACTTGCATTCTTAACCTATAACCTTTTCTAGACTAATGTTCCATAATTTCTTTCTCTCTTTCTCTTTCTCTTTCTTTTTCTTTTTTTCTTTTTTCTTTTTTTTGTTTGTGTGTGTGTGTGTGTGTGTTCCATACTTTAGTTACCTGAAAATATTAGAAGAAATATGAGGCTCTGATCTGAATTTTAGCATTTTCTTTTGGATGTTCTCTTCAAACCTTTCTATGGGCAAGGAGCAAGAGAACTTGAAAGAGCTCAAAACACATCCCATTCCCTAGTGAGAGAAGAGAGATTCTCATTTGCACAGTCCCTCTAAGGTCTTCACTCATGGATTCAAGGAGTAGAAGATTATGGTGCTAACACATAATCAACAATGCTTTTATGTTTGTCTGTCGGTTGGTTAGTCGACATTTAGTTCTAAGATTAGCTTAAGTGGACAAGTAACTAATAGAAGAAGAGTTTGTATATCAAACAGAAGATATGGCATTGTCTAATGATTTGTATCAGCTGTATGTAAGCAAATAAAGAAAGTTTGTAGGAGTAGAAATATGAAGCTATTCCTAGATAACTTTTTTCTATGCATAAAGAATCTAATTGATAGAAGAAGCATCGTAAAGATCAGTTTTTGGCTGGTTTCGAATTGGATTTTGTTGTTCTTGTTGTCTCTGTTAATGAAATGAAGTTTTGCAAACACCAGGAACTTGAGGCGTTGGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAAGATCGATGCCGTAAACAAGGAATTAAAGCCTCTAGGACATACCTGTCAAAAGAAGGTAAGATTTGGGGAAGGAATAGCTGTGTGGACAAGCATTGCCTAGCATATAAGATGATGTTGCATTCTGTGAATGTCAATTATTGTACCTTGCAATATCAAATAGGACCACTGAGCTGGTTTTTCTATTGTCTGTCATAGGAAAAAGAGTACAAGGAAGCTCTCGAAGCCTTTAATGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGGTAAGCTCCCTTGAATCCCTTTCGTTTTCCATTATCTGCATGTCAAACGTTATAAATAACCCAGCAGTAGGAACCAAGTCAGTCTTCCACGTCTGGGGGCCATTCAATTAATTTTGAACCTTATCGATTTCGACGATCAGTTCAGCAATTGAAAAACCATGCTGAAGTCTGTGAAATCACAACTGGTCAAGGCAACTTGAATGGGTTCCATCACTTGGAAAACTTTTTCTTTTCATGTATTGTCGTTCGGGTTTCAATTGATGGGTTGATTTGTTTTTTTCGGTGGGCAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAACTGAATTGATTGATTGATTGATTGATTGGAGCGACGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGTGATGTATTTAATATAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTGTGTTTTGGGTGTTATTTTTATAATTTGTCTTTGTTTGTTTATTTTTCCTCTAGAGAAGTTACTCAGAAACATTTAACTGATTTTAGGAAGGGAATTGCCCTATAAACAGGTTTGTAACTGATCTCCCCCTTTGTTTTTCTTTATCCTCTTTTCTCATCACTTCACTTATCTCTCTCTCTCTGTCTATAAAATGAGGGAGAAAATCCAATTAGTCAAAGTTTAAATATTTGTAATGTTGAAATATTACTAAATCCCAAGTTTATTGATGAATTAGAGTATGTTTAATCTTTAATTAATCTTAACCATCACTATTGACCTCTTTGAACAGCCCTAGTTATTTTTAGGGGATATTCCCTAGGCATGGAGAAATTATTCGATGATTCATCGCATTGCGGCTGGTAGTTTTGCATTGTTGGATGTGAGATAAAAACTGTAAAAGTAGGTCGAATTAGGGATGTATAATCTTGGGGTTGCAGGCCTCATTCCATCGTTTTTTCCAAACATGGGAATGTTTGATTTATGTTGTTTTCTAGGAAAAGTTTATGTTGCCAAGATAAGACAATTTTATATGGAATGTGATAGTTTCTTAGAATAATCAGATTTTATTG

mRNA sequence

TAAAAGGTGAAGCTGGGTGGGCAGTTTCAAAAGGGCATTGTATTCTATTCTTAGTTTTTTATAAGCACTTCGCAATACCCATAATCCACAGCTGAAAAGAAAAACTGAAATACAGCACAAACCCCATCATTTCAAAAGCAAAAGCAAAAGAAGAGAGAGAGAATACACAAACCCAAGAGAGAGAAAAAGCAACAAACCCAGAAAGAAAGGAAGAAGAAGAAGAAGAAGAACAGAGGAAAATACAAGGAATTTCAAAGAAGAAGAAAAAGGGTTTTGTGGGTTAAGACGATGCAGACCGAACAAGCTCAGCAGCAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCCAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTCTCCACTTTCCGAGCTAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTCAGAGAGAAAGTTCAAGCACAGTTAGGCCGAGTCGAAGAAGAAACCAAACGCCTCGCTTGCATCCGTGAGGAACTTGAGGCGTTGGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAAGATCGATGCCGTAAACAAGGAATTAAAGCCTCTAGGACATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCTCTCGAAGCCTTTAATGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAACTGAATTGATTGATTGATTGATTGATTGGAGCGACGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGTGATGTATTTAATATAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTGTGTTTTGGGTGTTATTTTTATAATTTGTCTTTGTTTGTTTATTTTTCCTCTAGAGAAGTTACTCAGAAACATTTAACTGATTTTAGGAAGGGAATTGCCCTATAAACAGGTTTGTAACTGATCTCCCCCTTTGTTTTTCTTTATCCTCTTTTCTCATCACTTCACTTATCTCTCTCTCTCTGTCTATAAAATGAGGGAGAAAATCCAATTAGTCAAAGTTTAAATATTTGTAATGTTGAAATATTACTAAATCCCAAGTTTATTGATGAATTAGAGTATGTTTAATCTTTAATTAATCTTAACCATCACTATTGACCTCTTTGAACAGCCCTAGTTATTTTTAGGGGATATTCCCTAGGCATGGAGAAATTATTCGATGATTCATCGCATTGCGGCTGGTAGTTTTGCATTGTTGGATGTGAGATAAAAACTGTAAAAGTAGGTCGAATTAGGGATGTATAATCTTGGGGTTGCAGGCCTCATTCCATCGTTTTTTCCAAACATGGGAATGTTTGATTTATGTTGTTTTCTAGGAAAAGTTTATGTTGCCAAGATAAGACAATTTTATATGGAATGTGATAGTTTCTTAGAATAATCAGATTTTATTG

Coding sequence (CDS)

ATGCAGACCGAACAAGCTCAGCAGCAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCCAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTCTCCACTTTCCGAGCTAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTCAGAGAGAAAGTTCAAGCACAGTTAGGCCGAGTCGAAGAAGAAACCAAACGCCTCGCTTGCATCCGTGAGGAACTTGAGGCGTTGGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAAGATCGATGCCGTAAACAAGGAATTAAAGCCTCTAGGACATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCTCTCGAAGCCTTTAATGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA

Protein sequence

MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

Homology

[Close]

BLAST of Bhi11G001662 vs. TAIR10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 145.2 bits (365), Expect = 3.6e-35
Identity = 127/149 (85.23%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 18  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 77
           +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA I
Sbjct: 29  SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALI 88

Query: 78  REELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEKVQL 137
           REELE LADPMR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +EKVQL
Sbjct: 89  REELEGLADPMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREKVQL 148

Query: 138 ITKLMELVSESERLRLKKLEELSKNIDTI 167
           IT+LMELV ESE++R+KKLEELSKNID+I
Sbjct: 149 ITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of Bhi11G001662 vs. TAIR10
Match: AT5G03660.1 (Family of unknown function (DUF662) )

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-31
Identity = 81/145 (55.86%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 20  SLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE 79
           S+SFSS + KED+E+S  ALS F+AKEEEIE+KKME+RE+VQAQLGRVE+E+KRLA IRE
Sbjct: 25  SMSFSSQMKKEDDELSMKALSAFKAKEEEIEKKKMEIRERVQAQLGRVEDESKRLAMIRE 84

Query: 80  ELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEKVQLIT 139
           ELE  ADPMRKE                                       NKEKV+LIT
Sbjct: 85  ELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTVQKKETEYKDALEAFNEKNKEKVELIT 144

Query: 140 KLMELVSESERLRLKKLEELSKNID 165
           KL EL  ESE+ R KKLEELSKNID
Sbjct: 145 KLQELEGESEKFRFKKLEELSKNID 169

[Close]

BLAST of Bhi11G001662 vs. TAIR10
Match: AT2G27740.1 (Family of unknown function (DUF662) )

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21
Identity = 79/162 (48.77%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 7   QQQQQLMVQ--NNTGSLSF--SSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQA 66
           +Q Q   +Q   ++G++S   S  + +++EE+S+SA + F+AKE+EIER+KMEV+++VQ 
Sbjct: 9   EQPQSPFIQRIKSSGNISMNGSPMIDEKEEELSQSAFALFKAKEDEIERRKMEVKDRVQK 68

Query: 67  QLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 126
           +LG  EE T+RLA IREELEAL DPMRKE   XXXXXXXXXX                  
Sbjct: 69  KLGLAEEATRRLAEIREELEALTDPMRKEISAXXXXXXXXXXELKPLGQSCQRKEREFKE 128

Query: 127 XXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNID 165
                   NKEK   ++KL+ELV+ESE+LR+ KLEELSK+I+
Sbjct: 129 ALEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIE 170

[Close]

BLAST of Bhi11G001662 vs. TAIR10
Match: AT3G52900.1 (Family of unknown function (DUF662) )

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18
Identity = 62/152 (40.79%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 16  NNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA 75
           N  G L    +   E+EEI + A++ F+A+EEEIERKKM V+EKVQ +LG  EE T+ L 
Sbjct: 16  NTNGKLPMEDN---EEEEIWKVAVTRFQAREEEIERKKMTVKEKVQQRLGFAEEATRCLT 75

Query: 76  CIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEKV 135
              EELE + DPMRKE                                       NKEK 
Sbjct: 76  QTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKDTLEAFNEKNKEKA 135

Query: 136 QLITKLMELVSESERLRLKKLEELSKNIDTIR 168
            L++ LMEL++ESERLR+KKLEE++K + T++
Sbjct: 136 HLVSMLMELLAESERLRIKKLEEINKTVGTLQ 164

[Close]

BLAST of Bhi11G001662 vs. TAIR10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 84.3 bits (207), Expect = 7.6e-17
Identity = 92/162 (56.79%), Postives = 106/162 (65.43%), Query Frame = 0


Query: 7   QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGR 66
           Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLG 
Sbjct: 10  QPPQQMM------SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGX 69

Query: 67  VEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 126
                                    XXXXXXXXXXXXXXXXXXXXXXX            
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKEREYKEALDT 129

Query: 127 XXXXNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDT 166
               N+EKVQLITKLME   LV ESE+LRLKKL+ELS++IDT
Sbjct: 130 FNEKNREKVQLITKLMEMGQLVGESEKLRLKKLDELSRSIDT 165

[Close]

BLAST of Bhi11G001662 vs. TrEMBL
Match: tr|A0A0A0LGI7|A0A0A0LGI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.3e-50
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Bhi11G001662 vs. TrEMBL
Match: tr|A0A1S3B6L6|A0A1S3B6L6_CUCME (uncharacterized protein LOC103486581 OS=Cucumis melo OX=3656 GN=LOC103486581 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.0e-48
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           XXXXXXXXXX  EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XXXXXXXXXXXXEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Bhi11G001662 vs. TrEMBL
Match: tr|A0A0B0NX29|A0A0B0NX29_GOSAR (RAB6-interacting golgin OS=Gossypium arboreum OX=29729 GN=F383_22701 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 127/166 (76.51%), Postives = 133/166 (80.12%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQTEQ  Q Q  +   N+GSLSFSSHLSKEDEEIS+SALSTFRAKEEEIERKKMEVREKV
Sbjct: 2   MQTEQQPQHQNQLTVQNSGSLSFSSHLSKEDEEISKSALSTFRAKEEEIERKKMEVREKV 61

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           Q QLGRVEEETKRLA IREELEALADPMRKE XXXXXXXXXXXXXXXX            
Sbjct: 62  QLQLGRVEEETKRLATIREELEALADPMRKEVXXXXXXXXXXXXXXXXLGHTCQKKEREY 121

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
                     NKEKVQLITKLMELVSESERLR+KKLEELSKNID++
Sbjct: 122 KEALEAFNEKNKEKVQLITKLMELVSESERLRMKKLEELSKNIDSL 167

[Close]

BLAST of Bhi11G001662 vs. TrEMBL
Match: tr|A0A1U8HU16|A0A1U8HU16_GOSHI (probable DNA double-strand break repair Rad50 ATPase isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107889559 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 127/166 (76.51%), Postives = 133/166 (80.12%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQTEQ  Q Q  +   N+GSLSFSSHLSKEDEEIS+SALSTFRAKEEEIERKKMEVREKV
Sbjct: 2   MQTEQQPQHQNQLTVQNSGSLSFSSHLSKEDEEISKSALSTFRAKEEEIERKKMEVREKV 61

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           Q QLGRVEEETKRLA IREELEALADPMRKE XXXXXXXXXXXXXXXX            
Sbjct: 62  QLQLGRVEEETKRLATIREELEALADPMRKEVXXXXXXXXXXXXXXXXLGHTCQKKEREY 121

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
                     NKEKVQLITKLMELVSESERLR+KKLEELSKNID++
Sbjct: 122 KEALEAFNEKNKEKVQLITKLMELVSESERLRMKKLEELSKNIDSL 167

[Close]

BLAST of Bhi11G001662 vs. TrEMBL
Match: tr|A0A2P5YBD0|A0A2P5YBD0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA07710 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 127/166 (76.51%), Postives = 133/166 (80.12%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQTEQ  Q Q  +   N+GSLSFSSHLSKEDEEIS+SALSTFRAKEEEIERKKMEVREKV
Sbjct: 2   MQTEQQPQHQNQLTVQNSGSLSFSSHLSKEDEEISKSALSTFRAKEEEIERKKMEVREKV 61

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           Q QLGRVEEETKRLA IREELEALADPMRKE XXXXXXXXXXXXXXXX            
Sbjct: 62  QLQLGRVEEETKRLATIREELEALADPMRKEVXXXXXXXXXXXXXXXXLGHTCQKKEREY 121

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
                     NKEKVQLITKLMELVSESERLR+KKLEELSKNID++
Sbjct: 122 KEALEAFNEKNKEKVQLITKLMELVSESERLRMKKLEELSKNIDSL 167

[Close]

BLAST of Bhi11G001662 vs. NCBI nr
Match: XP_004137876.1 (PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_3G751460 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 9.5e-50
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Bhi11G001662 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 3.1e-48
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           XXXXXXXXXX  EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XXXXXXXXXXXXEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Bhi11G001662 vs. NCBI nr
Match: XP_022945279.1 (uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 uncharacterized protein LOC111498737 [Cucurbita maxima] >XP_023539891.1 uncharacterized protein LOC111800435 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           Q QLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           XXXXXXXXXX  EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XXXXXXXXXXXXEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Bhi11G001662 vs. NCBI nr
Match: XP_022144720.1 (uncharacterized protein LOC111014340 [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 160/167 (95.81%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQTE  Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQTE--QPQQQLMVQNNQGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           Q QLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           XXXXXXXXXX  EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 XXXXXXXXXXXXEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 165

[Close]

BLAST of Bhi11G001662 vs. NCBI nr
Match: XP_016669520.1 (PREDICTED: probable DNA double-strand break repair Rad50 ATPase isoform X2 [Gossypium hirsutum] >XP_017608001.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase isoform X2 [Gossypium arboreum] >KHG17202.1 RAB6-interacting golgin [Gossypium arboreum] >PPS12922.1 hypothetical protein GOBAR_AA07710 [Gossypium barbadense])

HSP 1 Score: 176.8 bits (447), Expect = 6.2e-41
Identity = 127/166 (76.51%), Postives = 133/166 (80.12%), Query Frame = 0


Query: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQTEQ  Q Q  +   N+GSLSFSSHLSKEDEEIS+SALSTFRAKEEEIERKKMEVREKV
Sbjct: 2   MQTEQQPQHQNQLTVQNSGSLSFSSHLSKEDEEISKSALSTFRAKEEEIERKKMEVREKV 61

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           Q QLGRVEEETKRLA IREELEALADPMRKE XXXXXXXXXXXXXXXX            
Sbjct: 62  QLQLGRVEEETKRLATIREELEALADPMRKEVXXXXXXXXXXXXXXXXLGHTCQKKEREY 121

Query: 121 XXXXXXXXXXNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
                     NKEKVQLITKLMELVSESERLR+KKLEELSKNID++
Sbjct: 122 KEALEAFNEKNKEKVQLITKLMELVSESERLRMKKLEELSKNIDSL 167

The following BLAST results are available for this feature:

BLAST of Bhi11G001662 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G001662 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09980.1	3.6e-35	85.23	Family of unknown function (DUF662)	[more]
AT5G03660.1	1.9e-31	55.86	Family of unknown function (DUF662)	[more]
AT2G27740.1	1.7e-21	48.77	Family of unknown function (DUF662)	[more]
AT3G52900.1	1.1e-18	40.79	Family of unknown function (DUF662)	[more]
AT3G52920.1	7.6e-17	56.79	Family of unknown function (DUF662)	[more]

BLAST of Bhi11G001662 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGI7\|A0A0A0LGI7_CUCSA	6.3e-50	99.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=4 SV=1	[more]
tr\|A0A1S3B6L6\|A0A1S3B6L6_CUCME	2.0e-48	98.20	uncharacterized protein LOC103486581 OS=Cucumis melo OX=3656 GN=LOC103486581 PE=...	[more]
tr\|A0A0B0NX29\|A0A0B0NX29_GOSAR	4.1e-41	76.51	RAB6-interacting golgin OS=Gossypium arboreum OX=29729 GN=F383_22701 PE=4 SV=1	[more]
tr\|A0A1U8HU16\|A0A1U8HU16_GOSHI	4.1e-41	76.51	probable DNA double-strand break repair Rad50 ATPase isoform X2 OS=Gossypium hir...	[more]
tr\|A0A2P5YBD0\|A0A2P5YBD0_GOSBA	4.1e-41	76.51	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA07710 PE=4 SV...	[more]

BLAST of Bhi11G001662 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137876.1	9.5e-50	99.40	PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2 [Cucumis sa...	[more]
XP_008442808.1	3.1e-48	98.20	PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]	[more]
XP_022945279.1	1.3e-46	96.41	uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 unchar...	[more]
XP_022144720.1	1.2e-44	95.81	uncharacterized protein LOC111014340 [Momordica charantia]	[more]
XP_016669520.1	6.2e-41	76.51	PREDICTED: probable DNA double-strand break repair Rad50 ATPase isoform X2 [Goss...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007033	GORAB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0080185	effector dependent induction by symbiont of host immune response
biological_process	GO:1900426	positive regulation of defense response to bacterium
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008017	microtubule binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M001662	Bhi11M001662	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..51
None	No IPR available	PANTHER	PTHR21470:SF4	SUBFAMILY NOT NAMED	coord: 4..166
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 18..165 e-value: 1.3E-75 score: 252.3
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	NTKL-BINDING PROTEIN 1	coord: 4..166

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G001662	Csa3G751460	Cucumber (Chinese Long) v2	cuwgoB235
Bhi11G001662	Csa6G450440	Cucumber (Chinese Long) v2	cuwgoB529
Bhi11G001662	MELO3C024522	Melon (DHL92) v3.5.1	mewgoB614
Bhi11G001662	MELO3C009443	Melon (DHL92) v3.5.1	mewgoB373
Bhi11G001662	ClCG10G019230	Watermelon (Charleston Gray)	wcgwgoB079
Bhi11G001662	ClCG04G009830	Watermelon (Charleston Gray)	wcgwgoB377
Bhi11G001662	CSPI03G34300	Wild cucumber (PI 183967)	cpiwgoB237
Bhi11G001662	CSPI06G25270	Wild cucumber (PI 183967)	cpiwgoB532
Bhi11G001662	Cucsa.378430	Cucumber (Gy14) v1	cgywgoB755
Bhi11G001662	CmaCh06G004560	Cucurbita maxima (Rimu)	cmawgoB0986
Bhi11G001662	CmaCh03G011730	Cucurbita maxima (Rimu)	cmawgoB0771
Bhi11G001662	CmaCh14G002900	Cucurbita maxima (Rimu)	cmawgoB0298
Bhi11G001662	CmaCh07G008650	Cucurbita maxima (Rimu)	cmawgoB1045
Bhi11G001662	CmoCh06G004570	Cucurbita moschata (Rifu)	cmowgoB0983
Bhi11G001662	CmoCh03G011680	Cucurbita moschata (Rifu)	cmowgoB0764
Bhi11G001662	CmoCh14G002790	Cucurbita moschata (Rifu)	cmowgoB0287
Bhi11G001662	CmoCh07G008980	Cucurbita moschata (Rifu)	cmowgoB1038
Bhi11G001662	Lsi03G019260	Bottle gourd (USVL1VR-Ls)	lsiwgoB293
Bhi11G001662	Lsi01G012460	Bottle gourd (USVL1VR-Ls)	lsiwgoB147
Bhi11G001662	Cp4.1LG03g01060	Cucurbita pepo (Zucchini)	cpewgoB0750
Bhi11G001662	Cp4.1LG08g10340	Cucurbita pepo (Zucchini)	cpewgoB1073
Bhi11G001662	Cp4.1LG10g04100	Cucurbita pepo (Zucchini)	cpewgoB0069
Bhi11G001662	Cp4.1LG19g03580	Cucurbita pepo (Zucchini)	cpewgoB0585
Bhi11G001662	CsGy3G032080	Cucumber (Gy14) v2	cgybwgoB225
Bhi11G001662	CsGy6G024700	Cucumber (Gy14) v2	cgybwgoB504
Bhi11G001662	MELO3C009443.2	Melon (DHL92) v3.6.1	medwgoB374
Bhi11G001662	MELO3C024522.2	Melon (DHL92) v3.6.1	medwgoB619
Bhi11G001662	Carg05389	Silver-seed gourd	carwgoB0938
Bhi11G001662	Carg14517	Silver-seed gourd	carwgoB0188
Bhi11G001662	Carg10464	Silver-seed gourd	carwgoB0302
Bhi11G001662	Carg03695	Silver-seed gourd	carwgoB0316
Bhi11G001662	CsaV3_3G036960	Cucumber (Chinese Long) v3	cucwgoB240
Bhi11G001662	CsaV3_6G040460	Cucumber (Chinese Long) v3	cucwgoB543
Bhi11G001662	Cla017717	Watermelon (97103) v1	wgowmB008
Bhi11G001662	Cla018374	Watermelon (97103) v1	wgowmB051
Bhi11G001662	Cla97C10G202330	Watermelon (97103) v2	wgowmbB002
Bhi11G001662	Cla97C04G076650	Watermelon (97103) v2	wgowmbB038

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Bhi11G001662	Bhi03G001135	Wax gourd	wgowgoB008

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G001662	Cucumber (Gy14) v1	cgywgoB099