Carg03566 (gene) Silver-seed gourd

Overview
NameCarg03566
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger CCCH domain-containing protein
LocationCucurbita_argyrosperma_scaffold_006 : 714685 .. 717625 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCCATGTTCCAAAACCCTTCCCTCTGTATAGAGTTGGAGTTGGGGTTTACGACCACTTTTTTCGTTTCCTTGATTTGTATCTCTTTTTTTGTAGCCTTTAGGTCTTTAATCTTATCGTTTTAGTTGTATTCTTTGGTTTTTCTTTTCGAATTCGTTCGGTTTGTTGTGGATCTCGATCAGGCTTTGTTAGCAATGGATTACCGCAAGAGAGAGAAGCCCGAAGTTGGTTTAAATGCCAATGGCGGCTTCAAAAAGTCCAAGCAAGGTTTGTTCCTCCTTCCCTTGCTTGTTTATTTCGCATTTCGAGTACTTTTTGAAATTCTGTATTACGTTGTGTTGTTTCCGTGAAAATTTATGTATCGTGGAGATGGCAGTCTGTTCAAGTTTAGGTTCGAAGTCGAGTACTAGGAAATCGTTGGCGGACATTTGAATTTCGCTTATTTTGTTATTTCTGGTGGTGGTTTTTTTTTCTTTTTTTTCTTTTTTTGAACATTGACAAACTTTTAAATGCATAAATTGTTTGTTTGCCCAACTGAAGAAGATTGTATAACTTTGGAAGCCACCCCACCTGATTGAGGTCATTTCTATATAGAGACATCGAAATCTTATATGAGCATATTAAATCTTAAGAAGTTAATCCTTGGTTAAGAGTTCATTAACTGTTTGACATTTTAGAGTCATTACATTAGAATCTAGGATAAGGGACTGAGAAAACCGTAATAAATTTTTTGTAACAGAAATGGAGTACTTATCATCTGGTGTAGCAAGCAAATCAAAGCCATGCACCAAATTTTACAGGTTCAAATCTTCACTCATCTAAATAATTATTTGGAAACTTATCTTATCCTTTTCTGAATCTTTATAAATTTTTGTAAGTAATTTTCATTTTACAAGACCCAGTTCAATAATCTTGCTCATGAAATAGGCAAATTGCATACAGATTAAATCTATGGTCCTGTCTAACTATTAACAAATTTTCTATTTAAGCAATAAAGATTTAACTACTTTCTAGAGTATGGTTCTGTGATGGTATTTTGTACGTAAACTGTGAAAATGATGATAGTTTCTTCAGCTTATGCTGGACTAGTACAATTTTTCTCGTACATCTTTTTGGTAAGTCTATGTCATGATGTCGTCACAAATACTTGGTTAGCAGGATTTACGTCGTGATTTTTATGTTAACCTAGAAATCGATCACTGATCCAATTTGAGTACTTCCACAGAATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCTAGAGATATAGTAATATGGAGAAGACTAAATTGTTTGCTTGTTTGAGTAATAGCAATGAGATTCCCCTCCTTGATACTCAATCAAATCCTCGATGCATTCAATATCAATGAACCTAGAAAAGAGAATTGAGGGCGAATGAGCGAAGCCTCTCGACCGATAGGGAGAGGGGAGAGGATAGAATAGTCGATTTATACAGAATGGTAAAGGGGGTCACTAGAGCAATTATGATCTGGAAGTTGATCCGGGGCAAGTGTTCGGATCTATTACTTTTTAATTAAGTGTTCGGATCTACTACTTTTTAATTTATACTTCTATTTTTTAATATATACTTATATATATAGGGTAGGGGGGCGGATGTAGCCAAGTGGATCAAGGCAGCAGAGTGTTATGGCTAGTGCTTTGGGAGGTGTTAATTACTAAAACATCTAGAGTGGCACTTTTTAATTGTACCTATATTTGTGTATCCTCTCAAATTTATTGGAATCAGTTTCTCAAACCGTGTACGAGACATTGAATGAATATTCTTCTCTCTAATCTAAATTATTCTTGATAAACCCAGCTTGTGATATTTCAGAATCTCTGTTTGCATATCATTTGTGTTTCTTTCTTAGTGTTTTTGATTTGATGTGGATGGACTTGAAGAAATTTCTGCCCTGTTTTGATCGAGTAGATTTATTTTGAATGTGAAGCTAAACCTTGGAAATGTGTTTTGTAGACTTCTCATTTGCATTATTTTGTGGAATTGATGTCAAAGGCTATCAATTTGCAAAGCATGAAATCAGTTCTGACATCTTATATATGTGGAGAAGATCAATGTTTTCAATGTAAATGCCTTTCATTCTGATATTTTCCATTGTGGTTTCAGCACTACGGGCTGCCAATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGTTACAACGCTGTCGCGCAAATGATGAACCTAGAACCTGCTCCTTCAGCACCTAGAAATATGGCAGCGCCCCATCCAATGTCCAATGGCTCAACCACACAGGATGCTAAAACTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGTGACAAGTGTCATTTTGCTCACGGAGAATGGGAACTTGGAAGGCCTTCAGCTCCATCTCACGAAGATCCTCGGGCCACAGGATACTTTCCGAGCCGTTTACCTAGTAGGATGAACGCAGCTCCAGCAGGCCCCGCAGCCAGCTTTGGTGCCTCAGCCACGGCAAAGATCAGTGTTGATGCTTCCCTTGCTGGAGCCATTATAGGGAAGGGTGGTGTTAATTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCCATCAGGGATCATGAATCAGATCCCAACCTCAGAAACATTGAACTTGAGGGGACATTTGATCAGATTAAGGAAGCAAGTGCAATGGTAAGGGAGCTAATTGCGACGGTTTCGATGGCAGGCCCTTCAAAAGCAGCTACCAGAACAACAGGCGGCCCGGCTGCTCCGGCAGGTGGCAATTATAAGACAAAACTTTGTGACAATTTTGGGAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCGCATGGTTCTGCCGAGCTGCGCAAATCTGGTGCGTGAAGAAATCCATTTTTCT

mRNA sequence

CCTCCATGTTCCAAAACCCTTCCCTCTGTATAGAGTTGGAGTTGGGGTTTACGACCACTTTTTTCGTTTCCTTGATTTGTATCTCTTTTTTTGTAGCCTTTAGGTCTTTAATCTTATCGTTTTAGTTGTATTCTTTGGTTTTTCTTTTCGAATTCGTTCGGTTTGTTGTGGATCTCGATCAGGCTTTGTTAGCAATGGATTACCGCAAGAGAGAGAAGCCCGAAGTTGGTTTAAATGCCAATGGCGGCTTCAAAAAGTCCAAGCAAGAAATGGAGTACTTATCATCTGGTGTAGCAAGCAAATCAAAGCCATGCACCAAATTTTACAGCACTACGGGCTGCCAATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGTTACAACGCTGTCGCGCAAATGATGAACCTAGAACCTGCTCCTTCAGCACCTAGAAATATGGCAGCGCCCCATCCAATGTCCAATGGCTCAACCACACAGGATGCTAAAACTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGTGACAAGTGTCATTTTGCTCACGGAGAATGGGAACTTGGAAGGCCTTCAGCTCCATCTCACGAAGATCCTCGGGCCACAGGATACTTTCCGAGCCGTTTACCTAGTAGGATGAACGCAGCTCCAGCAGGCCCCGCAGCCAGCTTTGGTGCCTCAGCCACGGCAAAGATCAGTGTTGATGCTTCCCTTGCTGGAGCCATTATAGGGAAGGGTGGTGTTAATTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCCATCAGGGATCATGAATCAGATCCCAACCTCAGAAACATTGAACTTGAGGGGACATTTGATCAGATTAAGGAAGCAAGTGCAATGGTAAGGGAGCTAATTGCGACGGTTTCGATGGCAGGCCCTTCAAAAGCAGCTACCAGAACAACAGGCGGCCCGGCTGCTCCGGCAGGTGGCAATTATAAGACAAAACTTTGTGACAATTTTGGGAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCGCATGGTTCTGCCGAGCTGCGCAAATCTGGTGCGTGAAGAAATCCATTTTTCT

Coding sequence (CDS)

ATGGATTACCGCAAGAGAGAGAAGCCCGAAGTTGGTTTAAATGCCAATGGCGGCTTCAAAAAGTCCAAGCAAGAAATGGAGTACTTATCATCTGGTGTAGCAAGCAAATCAAAGCCATGCACCAAATTTTACAGCACTACGGGCTGCCAATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGTTACAACGCTGTCGCGCAAATGATGAACCTAGAACCTGCTCCTTCAGCACCTAGAAATATGGCAGCGCCCCATCCAATGTCCAATGGCTCAACCACACAGGATGCTAAAACTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGTGACAAGTGTCATTTTGCTCACGGAGAATGGGAACTTGGAAGGCCTTCAGCTCCATCTCACGAAGATCCTCGGGCCACAGGATACTTTCCGAGCCGTTTACCTAGTAGGATGAACGCAGCTCCAGCAGGCCCCGCAGCCAGCTTTGGTGCCTCAGCCACGGCAAAGATCAGTGTTGATGCTTCCCTTGCTGGAGCCATTATAGGGAAGGGTGGTGTTAATTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCCATCAGGGATCATGAATCAGATCCCAACCTCAGAAACATTGAACTTGAGGGGACATTTGATCAGATTAAGGAAGCAAGTGCAATGGTAAGGGAGCTAATTGCGACGGTTTCGATGGCAGGCCCTTCAAAAGCAGCTACCAGAACAACAGGCGGCCCGGCTGCTCCGGCAGGTGGCAATTATAAGACAAAACTTTGTGACAATTTTGGGAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCGCATGGTTCTGCCGAGCTGCGCAAATCTGGTGCGTGA

Protein sequence

MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHYVPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCHFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSMAGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA
Homology
[Close]
BLAST of Carg03566 vs. NCBI nr
Match: XP_022934056.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata])

HSP 1 Score: 588.2 bits (1515), Expect = 1.6e-164
Identity = 292/295 (98.98%), Postives = 293/295 (99.32%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MDYRKREKPEVGLNANGGFKKSKQEMEYLS+GVASKSKPCTKFYSTTGCQFGEGCHFLHY
Sbjct: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNS EGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSTEGCKFGDKCH 120

Query: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180
           FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180

Query: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240
           AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM
Sbjct: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240

Query: 241 AGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 296
           AGPSKAATRTTGGPAAPAG NYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA
Sbjct: 241 AGPSKAATRTTGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 295

[Close]
BLAST of Carg03566 vs. NCBI nr
Match: XP_023526424.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.3 bits (1479), Expect = 2.3e-160
Identity = 285/295 (96.61%), Postives = 289/295 (97.97%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MDYRKR KPEVGLNANGGFKKSKQEMEYLS+GVASKSKPCTKFYSTTGCQFGEGCHFLHY
Sbjct: 1   MDYRKRGKPEVGLNANGGFKKSKQEMEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNLEPAP APR++AAPHPMSNGSTTQD KTRMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAAPHPMSNGSTTQDVKTRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180
           FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRM+AAPAGPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMSAAPAGPAASFGASATAKISVDASLAG 180

Query: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240
           AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM
Sbjct: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240

Query: 241 AGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 296
           AGP KAATR TGGPAAPAG NYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA
Sbjct: 241 AGPPKAATRATGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 295

[Close]
BLAST of Carg03566 vs. NCBI nr
Match: XP_022983050.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima])

HSP 1 Score: 563.5 bits (1451), Expect = 4.1e-157
Identity = 280/295 (94.92%), Postives = 286/295 (96.95%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MDYRKR K EVGLNAN GFKKSKQE+EYLS+GVASKSKPCTKFYSTTGCQFGEGCHFLHY
Sbjct: 1   MDYRKRGKSEVGLNANAGFKKSKQELEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNLEPAP APR++AAPHP+SNGSTTQDAKTRMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAAPHPLSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180
           FAHGEWELGRPSAPSHEDPR TGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGRPSAPSHEDPRDTGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180

Query: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240
           AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVR+LIATVSM
Sbjct: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRDLIATVSM 240

Query: 241 AGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 296
           AGP KAATR TGGPAA AG NYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA
Sbjct: 241 AGPPKAATRATGGPAATAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 295

[Close]
BLAST of Carg03566 vs. NCBI nr
Match: XP_008443064.1 (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 500.4 bits (1287), Expect = 4.3e-138
Identity = 248/294 (84.35%), Postives = 266/294 (90.48%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MD RKR +PEVGLNANGG KKSKQEMEYLS+GVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAP APRNM AP PMSNGS TQ  K+RMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180
           FAH EWELG+PSAPSH+DPR+ G+ P+RL +RM+AAP   AASFGAS+TAKISVDASLAG
Sbjct: 121 FAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLAG 180

Query: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240
           AIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELI TVSM
Sbjct: 181 AIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVSM 240

Query: 241 AGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 295
           AGP K+A   TGG A PAG N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 AGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 294

[Close]
BLAST of Carg03566 vs. NCBI nr
Match: XP_022158356.1 (zinc finger CCCH domain-containing protein 14-like [Momordica charantia])

HSP 1 Score: 497.7 bits (1280), Expect = 2.8e-137
Identity = 251/295 (85.08%), Postives = 264/295 (89.49%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MD RKR +PEVGLNANGGFK SKQEME LS+GV SKSKPCTKFYSTTGC FGEGCHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGFKMSKQEMESLSTGVGSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYN VAQMMNL P P A RNMAAP PMSNGS     KTRMCNKYNSAEGCKFG+KCH
Sbjct: 61  VPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKCH 120

Query: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180
           FAHGEWELG+P APSH+D RA G+ P+RLPSRM AAP+GPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGASATAKISVDASLAG 180

Query: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240
           AIIGKGG+NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELI TVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIVTVSM 240

Query: 241 AGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 296
           AGP K+A    GG AAP+G N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSGA
Sbjct: 241 AGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 291

[Close]
BLAST of Carg03566 vs. TAIR10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-68
Identity = 153/299 (51.17%), Postives = 183/299 (61.20%), Query Frame = 0 

Query: 1   MDYRKREKPEVGL--NANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFL 60
           MD RKR +PE     N+NGGFK+SKQEME +S+G+ SKSKPCTKF+ST+GC FG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNLEPAPS-APRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNA AQM NL P  S   RNM                       +   G +F  
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNMQG---------------------SGGPGGRFSG 120

Query: 121 KCHFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDAS 180
           +          G P                          +GP + FGAS T+KISVDAS
Sbjct: 121 R----------GDPG-------------------------SGPVSIFGAS-TSKISVDAS 180

Query: 181 LAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIAT 240
           LAGAIIGKGG++SKQICR+TGAKLSI+DHE DPNL+ IELEGTF+QI  AS MVRELI  
Sbjct: 181 LAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIGR 238

Query: 241 VSMAGPSKAATRTTGGPAAP--AGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 295
           +     S    +  GGP      G NYKTK+CD + KG+CT+G+RCHFAHG +ELR+SG
Sbjct: 241 LG----SVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 238

[Close]
BLAST of Carg03566 vs. TAIR10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.8e-67
Identity = 155/303 (51.16%), Postives = 182/303 (60.07%), Query Frame = 0 

Query: 1   MDYRKREKPEVG-LNAN-GGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFL 60
           MD RKR +PE G  N+N GG+KKSKQEME  S+G+ SKSKPCTKF+ST+GC FGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-EPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNAV+QM N+  P P   RNM                        S  G +F  
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM----------------------QGSGNGGRFSG 120

Query: 121 KCHFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDAS 180
           +     GE      S P H                         ++FG SATA+ SVDAS
Sbjct: 121 R-----GE------SGPGH------------------------VSNFGDSATARFSVDAS 180

Query: 181 LAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIAT 240
           LAGAIIGKGGV+SKQICRQTG KLSI+DHE DPNL+NI LEGT +QI EASAMV++LI  
Sbjct: 181 LAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGR 240

Query: 241 VS-----MAGPSKAATRTTGGPAAP-AGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELR 295
           ++                 G    P  G N+KTK+C+ F KG+CTFG+RCHFAHG AELR
Sbjct: 241 LNSXXXXXXXXXXXXXXXMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAELR 246

[Close]
BLAST of Carg03566 vs. TAIR10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-08
Identity = 35/115 (30.43%), Postives = 53/115 (46.09%), Query Frame = 0 

Query: 36  KSKPCTKFYSTTGCQFGEGCHFLHYVPGGYN------------AVAQMMNLEPAPSAPR- 95
           + K C KF     C +G+ C+F+H     +             +V      +P+ +A   
Sbjct: 185 RMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNL 244

Query: 96  -------NMAAPHPMSNGSTTQDA--KTRMCNKYNSAEGCKFGDKCHFAHGEWEL 129
                  ++  P PM+NG   +    KTR+C K++    C FGDKCHFAHG+ EL
Sbjct: 245 IEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAEL 299

[Close]
BLAST of Carg03566 vs. TAIR10
Match: AT2G25970.1 (KH domain-containing protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06
Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 0 

Query: 138 DPRATGYFPSRLPSRMNAAPAGPAASFGA--SATAKISVDASLAGAIIGKGGVNSKQICR 197
           D +    +PS         P+    S+G+    T KI +     G IIGKGG   K +  
Sbjct: 102 DNKGFSSYPSEGKQMSGTVPSSIPVSYGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQL 161

Query: 198 QTGAKLSI-RDHESDPN--LRNIELEGTFDQIKEASAMVRELI 236
           Q+GAK+ + RD ++DPN   R ++L GT DQI +A  ++ +++
Sbjct: 162 QSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITDVL 204

[Close]
BLAST of Carg03566 vs. TAIR10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 48.5 bits (114), Expect = 8.1e-06
Identity = 39/127 (30.71%), Postives = 55/127 (43.31%), Query Frame = 0 

Query: 13  LNANGGFKKSKQEMEYLSSGVAS---KSKPCTKFYSTTGCQFGEGCHFLH-----YVPGG 72
           +N++G    SK+     SS +     K+K C KF + T       CHF H      +P  
Sbjct: 47  INSDGAESPSKKTRSSSSSEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPXX 106

Query: 73  YNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDA---KTRMCNKYNSAEGCKFGDKCHF 129
                Q    E + +      +  P  N + T  +   KTR+CNK+ +   C FG  CHF
Sbjct: 107 XXXNWQETVTEASRNRESFAVSLGPRGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHF 166

[Close]
BLAST of Carg03566 vs. Swiss-Prot
Match: sp|Q7F8R0|C3H14_ORYSJ (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-88
Identity = 186/305 (60.98%), Postives = 214/305 (70.16%), Query Frame = 0 

Query: 4   RKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHYVPG 63
           RKR KP+    ANG   K  +E E   +GV SKSKPCTKF+ST+GC FGEGCHFLH+ PG
Sbjct: 6   RKRGKPD---GANGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNAVAQMMNLEPAPSA--PRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCHF 123
           GY AVA+M NL     A  P  M   + + +G  T   KTR+CNKYN+AEGCK+GDKCHF
Sbjct: 66  GYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWGDKCHF 125

Query: 124 AHGEWELGRP-----SAPSHEDPRATGYF-PSRLPSRMNAAPAGPAASFGASATAKISVD 183
           AHGE ELG+P     S P    PR TG+F P  +PS   + P    ASFGASATAKISVD
Sbjct: 126 AHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSPAMSTP----ASFGASATAKISVD 185

Query: 184 ASLAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELI 243
           ASLAG IIG+GGVN+KQI R TGAKL+IRDHESD NL+NIELEGTFDQIK ASAMVRELI
Sbjct: 186 ASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRELI 245

Query: 244 ATVSMAGPSK-----AATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAEL 296
            ++    P +       +   GGP    G N+KTKLC+NF KGSCTFG+RCHFAHG  EL
Sbjct: 246 VSIGGGAPPQGKKPVGGSHRGGGP----GSNFKTKLCENFTKGSCTFGDRCHFAHGENEL 299

[Close]
BLAST of Carg03566 vs. Swiss-Prot
Match: sp|Q7XPK1|C3H31_ORYSJ (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.4e-85
Identity = 179/303 (59.08%), Postives = 204/303 (67.33%), Query Frame = 0 

Query: 4   RKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHYVPG 63
           RKR +P+       G K+S+ E E   +G++SK KPCTKF+ST GC FGEGCHF H+VPG
Sbjct: 8   RKRSRPDTANGGAAGGKRSR-ETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPG 67

Query: 64  GYNAVAQMMNL-EPAPSAPRNMAAPHPM-SNGSTTQDAKTRMCNKYNSAEGCKFGDKCHF 123
           GY AVA+ +NL  PA  AP      H    N       KTRMC KYN+AEGCKFGDKCHF
Sbjct: 68  GYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHF 127

Query: 124 AHGEWELGRPSAPSHED---PRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASL 183
           AHGE ELG+P+  SHE    P   G +  R      AA   PA +FGASATAKISVDASL
Sbjct: 128 AHGERELGKPAYMSHESAMAPPMGGRYGGRPEPPPPAAMGPPAGNFGASATAKISVDASL 187

Query: 184 AGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATV 243
           AG IIGKGGVN+KQICR TG KLSIRDHESD NL+NIELEG FDQIK+AS MV ELIAT+
Sbjct: 188 AGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGELIATI 247

Query: 244 SMAGPSKAAT----RTTGGPAAPAGG--NYKTKLCDNFGKGSCTFGERCHFAHGSAELRK 296
           S + P+K                 GG  NYKTKLC+NF KG+CTFG+RCHFAHG  E RK
Sbjct: 248 SPSTPAKKPAGXXXXXXXXXXXXXGGRSNYKTKLCENFVKGTCTFGDRCHFAHGENEQRK 307

[Close]
BLAST of Carg03566 vs. Swiss-Prot
Match: sp|Q69XQ3|C3H44_ORYSJ (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.6e-78
Identity = 171/298 (57.38%), Postives = 195/298 (65.44%), Query Frame = 0 

Query: 5   KREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHYVPGG 64
           KR  PE     NG  K+++   E    GV SK KPCTKF+ST+GC FG  CHFLH  PGG
Sbjct: 7   KRAAPE---GTNGAAKRARAS-ESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGG 66

Query: 65  YNAVAQMMN------LEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDK 124
           Y A A+M +        P    P    AP    NG  T   KTRMCNKYN+AEGCK+G K
Sbjct: 67  YQAAAKMTSHGGTAVAAPPGRMPLGPGAP----NGPPTSSVKTRMCNKYNTAEGCKWGSK 126

Query: 125 CHFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASL 184
           CHFAHGE ELG+P    +  P   G  P   P  M      P ++FGASATAKISVDASL
Sbjct: 127 CHFAHGERELGKPMLLDNSMPHPMGSMPFEAPP-MPGPDIVPPSTFGASATAKISVDASL 186

Query: 185 AGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATV 244
           AG IIGKGG N+K I R TGAKL+IRD+ES+PNL+NIELEGTFDQIK ASAMV ELI  +
Sbjct: 187 AGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRI 246

Query: 245 S-MAGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 296
           S  A P+K   R  G  A   G N+KTKLC+NF KGSCTFG+RCHFAHG +ELRK  A
Sbjct: 247 SGNAPPAKNPGR--GSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRKPPA 293

[Close]
BLAST of Carg03566 vs. Swiss-Prot
Match: sp|Q9FG30|C3H52_ARATH (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.0e-66
Identity = 153/299 (51.17%), Postives = 183/299 (61.20%), Query Frame = 0 

Query: 1   MDYRKREKPEVGL--NANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFL 60
           MD RKR +PE     N+NGGFK+SKQEME +S+G+ SKSKPCTKF+ST+GC FG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNLEPAPS-APRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNA AQM NL P  S   RNM                       +   G +F  
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNMQG---------------------SGGPGGRFSG 120

Query: 121 KCHFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDAS 180
           +          G P                          +GP + FGAS T+KISVDAS
Sbjct: 121 R----------GDPG-------------------------SGPVSIFGAS-TSKISVDAS 180

Query: 181 LAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIAT 240
           LAGAIIGKGG++SKQICR+TGAKLSI+DHE DPNL+ IELEGTF+QI  AS MVRELI  
Sbjct: 181 LAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIGR 238

Query: 241 VSMAGPSKAATRTTGGPAAP--AGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 295
           +     S    +  GGP      G NYKTK+CD + KG+CT+G+RCHFAHG +ELR+SG
Sbjct: 241 LG----SVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 238

[Close]
BLAST of Carg03566 vs. Swiss-Prot
Match: sp|Q9C7C3|C3H36_ARATH (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.1e-66
Identity = 155/303 (51.16%), Postives = 182/303 (60.07%), Query Frame = 0 

Query: 1   MDYRKREKPEVG-LNAN-GGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFL 60
           MD RKR +PE G  N+N GG+KKSKQEME  S+G+ SKSKPCTKF+ST+GC FGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-EPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNAV+QM N+  P P   RNM                        S  G +F  
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM----------------------QGSGNGGRFSG 120

Query: 121 KCHFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDAS 180
           +     GE      S P H                         ++FG SATA+ SVDAS
Sbjct: 121 R-----GE------SGPGH------------------------VSNFGDSATARFSVDAS 180

Query: 181 LAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIAT 240
           LAGAIIGKGGV+SKQICRQTG KLSI+DHE DPNL+NI LEGT +QI EASAMV++LI  
Sbjct: 181 LAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGR 240

Query: 241 VS-----MAGPSKAATRTTGGPAAP-AGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELR 295
           ++                 G    P  G N+KTK+C+ F KG+CTFG+RCHFAHG AELR
Sbjct: 241 LNSXXXXXXXXXXXXXXXMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAELR 246

[Close]
BLAST of Carg03566 vs. TrEMBL
Match: tr|A0A1S3B785|A0A1S3B785_CUCME (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103486772 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 2.8e-138
Identity = 248/294 (84.35%), Postives = 266/294 (90.48%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MD RKR +PEVGLNANGG KKSKQEMEYLS+GVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAP APRNM AP PMSNGS TQ  K+RMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180
           FAH EWELG+PSAPSH+DPR+ G+ P+RL +RM+AAP   AASFGAS+TAKISVDASLAG
Sbjct: 121 FAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLAG 180

Query: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240
           AIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELI TVSM
Sbjct: 181 AIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVSM 240

Query: 241 AGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 295
           AGP K+A   TGG A PAG N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 AGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 294

[Close]
BLAST of Carg03566 vs. TrEMBL
Match: tr|A0A0A0LEG5|A0A0A0LEG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.3e-130
Identity = 239/295 (81.02%), Postives = 258/295 (87.46%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MD RKR + EVGL ANGG KK+KQ+MEYLS+GVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAPRNMAA-PHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAP APRNM A P PMSNGS TQ  K+RMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLA 180
           HFAH EWELG+PSAPSH+DPR+ G+ P+RL SRM+A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVS 240
           GAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELI TVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 295
           MAGP K+AT            N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295

[Close]
BLAST of Carg03566 vs. TrEMBL
Match: tr|A0A2I4DFQ7|A0A2I4DFQ7_9ROSI (zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=LOC108979701 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 6.8e-124
Identity = 235/295 (79.66%), Postives = 251/295 (85.08%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MD RKR +PE GLNANGG KK KQEM+  S+GV SKSKPCTKF+ST GC FGE CHFLHY
Sbjct: 1   MDIRKRGRPEAGLNANGGAKKFKQEMD--STGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPA-PSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PA P+A RNMA P  + NGST    KTRMCNKYN+AEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLAPAVPAASRNMAGPPTIQNGSTPA-VKTRMCNKYNTAEGCKFGDKC 120

Query: 121 HFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLA 180
           HFAH +WELG+P APSHEDPRA G  P R+ SRM  AP GPAASFGASATAKISVDASLA
Sbjct: 121 HFAHNDWELGKPIAPSHEDPRAMGPIPGRMGSRMELAPPGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVS 240
           GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTF+QIKEASAMVR+LI TVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQIKEASAMVRQLIVTVS 240

Query: 241 MAGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 295
           ++GP K  T    G AAP G NYKTKLC+NF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 VSGPPK--THGMPGAAAPPGSNYKTKLCENFTKGSCTFGERCHFAHGAAELRKSG 290

[Close]
BLAST of Carg03566 vs. TrEMBL
Match: tr|A0A2I4HVP9|A0A2I4HVP9_9ROSI (zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=LOC109021933 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 8.3e-122
Identity = 230/295 (77.97%), Postives = 249/295 (84.41%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MD RKR +PE GLNANGGFKK KQEM+  S+GV SKSKPCTKF+ST GC FGE CHFLHY
Sbjct: 1   MDTRKRGRPEAGLNANGGFKKFKQEMD--STGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPA-PSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSAEGCKFGDKC 120
           V GGYNAVAQMMNL PA P+A RNMA P  + NGS     KTRMCNKYN+AEGCKFGDKC
Sbjct: 61  VTGGYNAVAQMMNLAPAVPAASRNMAGPPTIQNGS-APSVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 HFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLA 180
           HFAH EWELG+P APSH+DPR+ G  P R+  RM   P GPAASFGASATAKISVDASLA
Sbjct: 121 HFAHNEWELGKPIAPSHDDPRSMGPIPGRMGGRMEPPPPGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVS 240
           GAIIGKGGVNSKQICRQTGAKLSIR+HESDPNLRNIELEGTF+QIKEASAMVR+LI TVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIKEASAMVRQLIVTVS 240

Query: 241 MAGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 295
           ++GP K  T    G AAPAG N+KTKLC+NF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 VSGPPK--THGMTGAAAPAGSNFKTKLCENFSKGSCTFGERCHFAHGAAELRKSG 290

[Close]
BLAST of Carg03566 vs. TrEMBL
Match: tr|A0A0A0KZ79|A0A0A0KZ79_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.1e-117
Identity = 225/306 (73.53%), Postives = 247/306 (80.72%), Query Frame = 0 

Query: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSSGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60
           MD RKR +PE   N+NG FKK KQE+E LS+ V SKSKPCTKF+ST GC FGE CHFLHY
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLEPAPSAP-RNMAAPHPMSNG--STTQDAKTRMCNKYNSAEGCKFGD 120
           VPGGYN VAQMMNL P  + P RN+AAP  ++NG  S     KTRMCNKYN+AEGCKFGD
Sbjct: 61  VPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGD 120

Query: 121 KCHFAHGEWELGRPSAPSHEDPRA---------TGYFPSRLPSRMNAAPAGPAASFGASA 180
           KC+FAHGEWELGRP+ PSH++PRA           +   R+  RM+  P GPAASFGASA
Sbjct: 121 KCNFAHGEWELGRPNPPSHDNPRAMXXXXXXXXXXHMVGRMGGRMDLPPPGPAASFGASA 180

Query: 181 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEAS 240
           TAKIS+DASLAGAIIGKGG+NSKQICRQTGAKLSIRDHESDPNLRNIELEGTF+QI EAS
Sbjct: 181 TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEAS 240

Query: 241 AMVRELIATVSMAGPSKAATRTTGGPAAPAGGNYKTKLCDNFGKGSCTFGERCHFAHGSA 295
           AMVRELI TVSMAGP KA+    GGP AP G NYKTKLCDNF KGSCTFGERCHFAHG+A
Sbjct: 241 AMVRELIITVSMAGPGKASGGMGGGP-APTGSNYKTKLCDNFAKGSCTFGERCHFAHGAA 300

The following BLAST results are available for this feature:
BLAST of Carg03566 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022934056.11.6e-16498.98zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata][more]
XP_023526424.12.3e-16096.61zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo][more]
XP_022983050.14.1e-15794.92zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima][more]
XP_008443064.14.3e-13884.35PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo][more]
XP_022158356.12.8e-13785.08zinc finger CCCH domain-containing protein 14-like [Momordica charantia][more]
BLAST of Carg03566 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G06770.15.7e-6851.17KH domain-containing protein / zinc finger (CCCH type) family protein[more]
AT3G12130.12.8e-6751.16KH domain-containing protein / zinc finger (CCCH type) family protein[more]
AT3G19360.18.7e-0830.43Zinc finger (CCCH-type) family protein[more]
AT2G25970.12.1e-0633.01KH domain-containing protein[more]
AT2G35430.18.1e-0630.71Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Carg03566 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q7F8R0|C3H14_ORYSJ1.2e-8860.98Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q7XPK1|C3H31_ORYSJ6.4e-8559.08Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q69XQ3|C3H44_ORYSJ2.6e-7857.38Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q9FG30|C3H52_ARATH1.0e-6651.17Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9C7C3|C3H36_ARATH5.1e-6651.16Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Carg03566 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B785|A0A1S3B785_CUCME2.8e-13884.35zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO... [more]
tr|A0A0A0LEG5|A0A0A0LEG5_CUCSA1.3e-13081.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1[more]
tr|A0A2I4DFQ7|A0A2I4DFQ7_9ROSI6.8e-12479.66zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=... [more]
tr|A0A2I4HVP9|A0A2I4HVP9_9ROSI8.3e-12277.97zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=... [more]
tr|A0A0A0KZ79|A0A0A0KZ79_CUCSA2.1e-11773.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR004087KH_dom
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03566-RACarg03566-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 261..287
e-value: 3.5E-6
score: 36.6
coord: 98..125
e-value: 0.054
score: 22.6
coord: 34..61
e-value: 4.2
score: 11.3
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 100..125
e-value: 1.3E-4
score: 21.7
coord: 262..286
e-value: 9.5E-8
score: 31.7
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 34..62
score: 11.422
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 261..288
score: 15.901
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 98..126
score: 13.619
IPR004087K Homology domainSMARTSM00322kh_6coord: 166..236
e-value: 9.9E-14
score: 61.6
IPR036612K Homology domain, type 1 superfamilyGENE3DG3DSA:3.30.1370.10coord: 161..261
e-value: 2.3E-15
score: 58.3
IPR036612K Homology domain, type 1 superfamilySUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 160..238
NoneNo IPR availableGENE3DG3DSA:4.10.1000.10coord: 92..130
e-value: 6.8E-11
score: 43.4
coord: 262..293
e-value: 1.1E-12
score: 49.2
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 1..294
NoneNo IPR availablePANTHERPTHR10288:SF5ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 36-RELATEDcoord: 1..294
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 167..231
score: 14.907
NoneNo IPR availableCDDcd00105KH-Icoord: 169..231
e-value: 6.16682E-16
score: 69.5111
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 170..233
e-value: 3.0E-13
score: 49.3
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 261..291
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 97..128
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 35..61