CsGy3G034010 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G034010
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	zinc finger CCCH domain-containing protein 14-like
Location	Chr3 : 32823406 .. 32826643 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTTTTTTTTTTTTTGTAGCATTTAGAATTTTTAATCTTATCGTTTTAGACGTATTCTTTTCGAGTTCTTTAGTTTGTTGTGGATCTCGATCTGGGTTTATTACCAATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGGTTTCTTCCTCCTTCCCTTCCTTCTTTTACTTCTCAATTTCACTACTTTTTTAAACTTCTTGAGCTCTACTGTATGTATTACTTTGTCCTGTTTCTGTCCAGATTTTTGTATCAACAATAGGTTCGTAGTTCAATGTTAAGCAATCGATGGCGGTCATTCTATTTCGTTTACTTTTGTTATTTTTGGTGGTGGGGTTTTTTTTTTTTTTTTTGGGGGGGGGGGGTGCGGTTTCTGAATTCTGATTTAGAATTACAGATTTGTGGGTTTGAGTTTGCTGAAACTTTGCTTGTGAACTTCCTACGTGGGAAAGATTTAAGAAGCTATAAAGGGTTTAAACTATTTTGTGATGCCAGCTAAAGAATAAAAAACTTTGTGAAAGGTCAAAGATACTGTTCTAACAAACAGGATAATTTGTTAAAGAAACTAATGAGTATTGATTGATAATTGATCATAATATGACTTTTTGAACAATTTCAAACATTTAGGTGCATAAATTGTTGGTTTTCCCATAAATTTGTTAACTGCAGGAGGTACTATAACTGTGAAAGCCACCCCACCTAATTGAGACCACCTGAATATACATACAGAGACATTAAAATCTTATACGGGCATATTAAATCTTAAGTTATTTGTTGGTTAGCAGTTCATAAACTCTCAGGCATTTTAGAGTAATTACATTAAACTCTAGGAAAATTGACTAAGAAAACAATAATAAATTTTTTGTAACAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGGTTCAAATCTTCACTCATCTAAATAAATACATAGAAACTTATCCTTTTCTGAATCTTTATAAATTATTGTAAGAATCTAATTTTCTGAATCTCTATAATTTTGCTCATGAAAGAGACAAATTGCATACGTGTAAAATCTATTTATTGTCTAACTATATAAATATCTCTTTAAGTATAAAAGACTTAACCACTATTTAGAGTGTAACTTCTATGGAGATCAACAGTGATACTTATTCCTGTGAAAAGGAAAATTGAACTGGGAAGTGGTGATATTTTCTCCAGCTTATACTGATCATTACGATTTTTCTCTAAAATCTTTCTGGCAAGTCTATGTCTTGTTAATAGATGTCACAAATACTTGGTTCGCAGGGTTTCTTTTTACGTGATTATTTTTGTGTCAAGTGTTATTTATGGGTAGTGCTCGTTAATTACTCAAACACTGTCCTTATTGGCACTTTACAGAGGATGCCTTTGAACTGTACATTCTGAAAGTGCTTTAATGTACTTGTTTGTGTATGAATCTTCTCAAATTTATTGGAACCAGTTTTTACAGACTCTGTGAGATATATAATGAATATTCTTCTCTCTTATCTAAATTATTCTTGGTGAACCCTACTTTTGATATTTCAGAATCTCTGTTTGCAAATTCTTTTCTGCTGCTCATAAGGTTGTGAATTAGCACCTCCATTACAGCCTTACCTGAATAGGATTTACTCACATGTTTTATAACTGTCTTTTGAATTATTTTTCACTGAATCAAGCTGCTGTAATTTCAGGATCTCCATTATATGTTTTATTTTTCTCCCTATTTATGCTATCTTTCACTAATGAGTGGAGGAATAATAAAATATCAACATTTATTTTCCGTTGCTTATGATTTTGAATATCATTTTTGTTTCTTTTGCAAAATACCGAGCATAATTATTTTAAATCTGAATCTAAACAATGGAAGTGTGTCTGATATTCATCTTTTTGTGCAATTGATGTCAAAAGCTTTCAATTTGTCATGCATATGAAATGAGTTCGTCTTACATATGTGGAGAATATCTGTAGACTGATTGTTTCTATTTTGTTTTCAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCTGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCCATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATCGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCCGCCGAATTGCGCAAATCTGGCGTGTGAAGAAATCCGTTTTTCTTATTTTCTCTTTTTACCCCCAAATTTAGTGTTGTAGCGTAAGCCTTTGGTTCAGTTATTTGTATTAGATAAAGGTATCTATCTTGAATTATGGATGAACAGGGCAATGCAACTCAGTGGAAATTGACAGTTTTTATTATGGTTAAGAGAAAGTCAAAATTACAGTTTTGAAGACCCCATTCCTATCCAATATTCGTTTCATTCTCATTCTCCCTATACCCTATTTTACTTGCATGCTTCCATTTAGACATTTTGAACCTATTTTCATTTTTTAATATAAGCCATTTGGTAAAAGGGGAGTTCAATATTGGCAACTCAAAATATGCCTTCCCATCAATTCTTTACCCTTTAAAAACACATTTTATTCTAATACTATATATTAGAAAAAGCTAACAATCTTGAAAAAAAAGAAAC

mRNA sequence

TTCTTTTTTTTTTTTTTTGTAGCATTTAGAATTTTTAATCTTATCGTTTTAGACGTATTCTTTTCGAGTTCTTTAGTTTGTTGTGGATCTCGATCTGGGTTTATTACCAATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCTGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCCATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATCGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCCGCCGAATTGCGCAAATCTGGCGTGTGAAGAAATCCGTTTTTCTTATTTTCTCTTTTTACCCCCAAATTTAGTGTTGTAGCGTAAGCCTTTGGTTCAGTTATTTGTATTAGATAAAGGTATCTATCTTGAATTATGGATGAACAGGGCAATGCAACTCAGTGGAAATTGACAGTTTTTATTATGGTTAAGAGAAAGTCAAAATTACAGTTTTGAAGACCCCATTCCTATCCAATATTCGTTTCATTCTCATTCTCCCTATACCCTATTTTACTTGCATGCTTCCATTTAGACATTTTGAACCTATTTTCATTTTTTAATATAAGCCATTTGGTAAAAGGGGAGTTCAATATTGGCAACTCAAAATATGCCTTCCCATCAATTCTTTACCCTTTAAAAACACATTTTATTCTAATACTATATATTAGAAAAAGCTAACAATCTTGAAAAAAAAGAAAC

Coding sequence (CDS)

ATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCTGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCCATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATCGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCCGCCGAATTGCGCAAATCTGGCGTGTGA

Protein sequence

MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV

Homology

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BLAST of CsGy3G034010 vs. NCBI nr
Match: XP_004136573.1 (PREDICTED: zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN59309.1 hypothetical protein Csa_3G808380 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 1.1e-160
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296

[Close]

BLAST of CsGy3G034010 vs. NCBI nr
Match: XP_008443064.1 (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 548.1 bits (1411), Expect = 1.8e-152
Identity = 273/296 (92.23%), Postives = 279/296 (94.26%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGGLKK+KQ+MEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGA PPPMSNGSATQ VKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGA-PPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRS+GHIPNRLA+RMDA PP LAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELI+TVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSA G          NNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG+
Sbjct: 241 MAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGM 295

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BLAST of CsGy3G034010 vs. NCBI nr
Match: XP_022158356.1 (zinc finger CCCH domain-containing protein 14-like [Momordica charantia])

HSP 1 Score: 493.0 bits (1268), Expect = 6.9e-136
Identity = 250/295 (84.75%), Postives = 260/295 (88.14%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGG K +KQ+ME LSTGV SKSKPCTKFYSTTGCPFGE CHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGFKMSKQEMESLSTGVGSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYN VAQMMNL P PPA RNM A PPPMSNGSA   VK+RMCNKYNSAEGCKFG+KC
Sbjct: 61  VPGGYNTVAQMMNLTPIPPAARNMAA-PPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELGKP APSHDD R+MGHIPNRL SRM+A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIVTVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPKSA G          NN KTKLCDNFAKGSCTFGERCHFAHGAAELRKSG
Sbjct: 241 MAGPPKSAGG----TAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 290

[Close]

BLAST of CsGy3G034010 vs. NCBI nr
Match: XP_023526424.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.8 bits (1257), Expect = 1.3e-134
Identity = 242/295 (82.03%), Postives = 262/295 (88.81%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MD RKRG+ EVGL ANGG KK+KQ+MEYLSTGVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDYRKRGKPEVGLNANGGFKKSKQEMEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAPPAPR++ A P PMSNGS TQ VK+RMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAA-PHPMSNGSTTQDVKTRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELG+PSAPSH+DPR+ G+ P+RL SRM A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMSAAPAGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELI TVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPK+AT           +N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 MAGPPKAATRATGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 294

[Close]

BLAST of CsGy3G034010 vs. NCBI nr
Match: XP_022983050.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima])

HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132
Identity = 237/295 (80.34%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MD RKRG++EVGL AN G KK+KQ++EYLSTGVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDYRKRGKSEVGLNANAGFKKSKQELEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAPPAPR++ A P P+SNGS TQ  K+RMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAA-PHPLSNGSTTQDAKTRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELG+PSAPSH+DPR  G+ P+RL SRM+A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGRPSAPSHEDPRDTGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV++LI TVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRDLIATVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPK+AT           +N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 MAGPPKAATRATGGPAATAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 294

[Close]

BLAST of CsGy3G034010 vs. TAIR10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 253.8 bits (647), Expect = 1.3e-67
Identity = 149/305 (48.85%), Postives = 181/305 (59.34%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MDTRKRGR E G      GG KK+KQ+ME  STG+ SKSKPCTKF+ST+GCPFGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNAV+QM N+ PP P   RNM                         S  G    
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM-----------------------QGSGNG---- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                          R + R ++G PG  ++FG S+TA+ SVDA
Sbjct: 121 ------------------------------GRFSGRGESG-PGHVSNFGDSATARFSVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGG++SKQICR+TG KLSI+DHE DPNL+NI LEG+ +QI EASAMV++LI 
Sbjct: 181 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 240

Query: 241 TVS------MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAEL 297
            ++                          +NFKTK+C+ F+KG+CTFG+RCHFAHG AEL
Sbjct: 241 RLNSXXXXXXXXXXXXXXXMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAEL 247

[Close]

BLAST of CsGy3G034010 vs. TAIR10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 251.5 bits (641), Expect = 6.3e-67
Identity = 147/299 (49.16%), Postives = 179/299 (59.87%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MD RKRGR E      +NGG K++KQ+ME +STG+ SKSKPCTKF+ST+GCPFG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNA AQM NL PP     RNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                  +  G    R + R D G  G  + FGA ST+KISVDA
Sbjct: 121 -----------------------QGSGGPGGRFSGRGDPG-SGPVSIFGA-STSKISVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGGI+SKQICR TGAKLSI+DHE DPNL+ IELEG+F+QI  AS MV+ELI 
Sbjct: 181 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 241 TVSMAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
            +     P+   G          +N+KTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 RLGSVKKPQGIGG--PEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of CsGy3G034010 vs. TAIR10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein)

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-05
Identity = 58/226 (25.66%), Postives = 84/226 (37.17%), Query Frame = 0


Query: 88  PPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSMGHIP 147
           PPP++ G+A    K+RMC K+  A  C+ G+ C+FAH   +L +P  PS+          
Sbjct: 93  PPPVNKGTANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQP--PSN---------- 152

Query: 148 NRLASRMDAGPPGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDH 207
                 +   PP                  SLA  +      + K I R    +      
Sbjct: 153 ---WQEIVGPPPAGXXXXXXXXXXXXXXXXSLAPVVNNNWEDDQKIILRMKLCRKFCFGE 212

Query: 208 ESDPNLRNIELEGSFDQIKEASAMVQE---LIVTVSMAGPPKSATG-------XXXXXXX 267
           E     R   +     + +E S  ++E   + V  + A  P                   
Sbjct: 213 ECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVP 272

Query: 268 XXXNN--------FKTKLCDNF-AKGSCTFGERCHFAHGAAELRKS 295
              NN        +KT+LC  F   G C FG++CHFAHG AEL  S
Sbjct: 273 APMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNS 302

[Close]

BLAST of CsGy3G034010 vs. Swiss-Prot
Match: sp|Q7F8R0|C3H14_ORYSJ (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.4e-86
Identity = 183/305 (60.00%), Postives = 210/305 (68.85%), Query Frame = 0


Query: 4   RKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPG 63
           RKRG+ +    ANG   K  ++ E   TGV SKSKPCTKF+ST+GCPFGE CHFLH+ PG
Sbjct: 6   RKRGKPD---GANGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNAVAQMMNL--PPAPPAPRNMGAPPPPMSN----GSATQAVKSRMCNKYNSAEGCKFG 123
           GY AVA+M NL  P   P P  M     PM N    G  T  VK+R+CNKYN+AEGCK+G
Sbjct: 66  GYQAVAKMTNLGGPAIAPPPGRM-----PMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWG 125

Query: 124 DKCHFAHAEWELGKP-----SAPSHDDPRSMGHI-PNRLASRMDAGPPGLAASFGASSTA 183
           DKCHFAH E ELGKP     S P    PR  GH  P  + S   + P    ASFGAS+TA
Sbjct: 126 DKCHFAHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSPAMSTP----ASFGASATA 185

Query: 184 KISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAM 243
           KISVDASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+NIELEG+FDQIK ASAM
Sbjct: 186 KISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAM 245

Query: 244 VQELIVTVSMAGPP--KSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAA 295
           V+ELIV++    PP  K   G          +NFKTKLC+NF KGSCTFG+RCHFAHG  
Sbjct: 246 VRELIVSIGGGAPPQGKKPVG-GSHRGGGPGSNFKTKLCENFTKGSCTFGDRCHFAHGEN 297

[Close]

BLAST of CsGy3G034010 vs. Swiss-Prot
Match: sp|Q7XPK1|C3H31_ORYSJ (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.9e-83
Identity = 180/305 (59.02%), Postives = 210/305 (68.85%), Query Frame = 0


Query: 4   RKRGRAEVGLKANGGLK--KNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYV 63
           RKR R +    ANGG    K  ++ E   TG++SK KPCTKF+ST GCPFGE CHF H+V
Sbjct: 8   RKRSRPDT---ANGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFV 67

Query: 64  PGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 123
           PGGY AVA+ +NL  PA PAP           N     + K+RMC KYN+AEGCKFGDKC
Sbjct: 68  PGGYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKC 127

Query: 124 HFAHAEWELGKPSAPSHDDPRS--MGHIPNRLASRMDAGPPGL----AASFGASSTAKIS 183
           HFAH E ELGKP+  SH+   +  MG    R   R +  PP      A +FGAS+TAKIS
Sbjct: 128 HFAHGERELGKPAYMSHESAMAPPMG---GRYGGRPEPPPPAAMGPPAGNFGASATAKIS 187

Query: 184 VDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQE 243
           VDASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+NIELEG+FDQIK+AS MV E
Sbjct: 188 VDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGE 247

Query: 244 LIVTVSMAGPPKSATG------XXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGA 294
           LI T+S + P K   G      XXXXXXX   +N+KTKLC+NF KG+CTFG+RCHFAHG 
Sbjct: 248 LIATISPSTPAKKPAGXXXXXXXXXXXXXGGRSNYKTKLCENFVKGTCTFGDRCHFAHGE 306

[Close]

BLAST of CsGy3G034010 vs. Swiss-Prot
Match: sp|Q69XQ3|C3H44_ORYSJ (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-79
Identity = 164/286 (57.34%), Postives = 192/286 (67.13%), Query Frame = 0


Query: 14  KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMN 73
           +   G  K  +  E    GV SK KPCTKF+ST+GCPFG +CHFLH  PGGY A A+M +
Sbjct: 12  EGTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTS 71

Query: 74  ----LPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWEL 133
                  APP    +G   P   NG  T +VK+RMCNKYN+AEGCK+G KCHFAH E EL
Sbjct: 72  HGGTAVAAPPGRMPLG---PGAPNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGEREL 131

Query: 134 GKPSAPSHDDPRSMGHIPNRLASR--MDAGPPGLAASFGASSTAKISVDASLAGAIIGKG 193
           GKP    +  P  MG +P         D  PP   ++FGAS+TAKISVDASLAG IIGKG
Sbjct: 132 GKPMLLDNSMPHPMGSMPFEAPPMPGPDIVPP---STFGASATAKISVDASLAGGIIGKG 191

Query: 194 GINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKS 253
           G N+K I R TGAKL+IRD+ES+PNL+NIELEG+FDQIK ASAMV ELIV +S   PP  
Sbjct: 192 GTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAK 251

Query: 254 ATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRK 294
             G          +NFKTKLC+NF KGSCTFG+RCHFAHG +ELRK
Sbjct: 252 NPG-RGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290

[Close]

BLAST of CsGy3G034010 vs. Swiss-Prot
Match: sp|Q9C7C3|C3H36_ARATH (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.3e-66
Identity = 149/305 (48.85%), Postives = 181/305 (59.34%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MDTRKRGR E G      GG KK+KQ+ME  STG+ SKSKPCTKF+ST+GCPFGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNAV+QM N+ PP P   RNM                         S  G    
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM-----------------------QGSGNG---- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                          R + R ++G PG  ++FG S+TA+ SVDA
Sbjct: 121 ------------------------------GRFSGRGESG-PGHVSNFGDSATARFSVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGG++SKQICR+TG KLSI+DHE DPNL+NI LEG+ +QI EASAMV++LI 
Sbjct: 181 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 240

Query: 241 TVS------MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAEL 297
            ++                          +NFKTK+C+ F+KG+CTFG+RCHFAHG AEL
Sbjct: 241 RLNSXXXXXXXXXXXXXXXMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAEL 247

[Close]

BLAST of CsGy3G034010 vs. Swiss-Prot
Match: sp|Q9FG30|C3H52_ARATH (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-65
Identity = 147/299 (49.16%), Postives = 179/299 (59.87%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MD RKRGR E      +NGG K++KQ+ME +STG+ SKSKPCTKF+ST+GCPFG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNA AQM NL PP     RNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                  +  G    R + R D G  G  + FGA ST+KISVDA
Sbjct: 121 -----------------------QGSGGPGGRFSGRGDPG-SGPVSIFGA-STSKISVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGGI+SKQICR TGAKLSI+DHE DPNL+ IELEG+F+QI  AS MV+ELI 
Sbjct: 181 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 241 TVSMAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
            +     P+   G          +N+KTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 RLGSVKKPQGIGG--PEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of CsGy3G034010 vs. TrEMBL
Match: tr|A0A0A0LEG5|A0A0A0LEG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 7.0e-161
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296

[Close]

BLAST of CsGy3G034010 vs. TrEMBL
Match: tr|A0A1S3B785|A0A1S3B785_CUCME (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103486772 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 1.2e-152
Identity = 273/296 (92.23%), Postives = 279/296 (94.26%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGGLKK+KQ+MEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGA PPPMSNGSATQ VKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGA-PPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRS+GHIPNRLA+RMDA PP LAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELI+TVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSA G          NNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG+
Sbjct: 241 MAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGM 295

[Close]

BLAST of CsGy3G034010 vs. TrEMBL
Match: tr|A0A2I4DFQ7|A0A2I4DFQ7_9ROSI (zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=LOC108979701 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 7.5e-123
Identity = 228/296 (77.03%), Postives = 252/296 (85.14%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MD RKRGR E GL ANGG KK KQ+M+  STGV SKSKPCTKF+ST GCPFGE+CHFLHY
Sbjct: 1   MDIRKRGRPEAGLNANGGAKKFKQEMD--STGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PA PA     A PP + NGS T AVK+RMCNKYN+AEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLAPAVPAASRNMAGPPTIQNGS-TPAVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH +WELGKP APSH+DPR+MG IP R+ SRM+  PPG AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHNDWELGKPIAPSHEDPRAMGPIPGRMGSRMELAPPGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+F+QIKEASAMV++LIVTVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQIKEASAMVRQLIVTVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           ++GPPK  T           +N+KTKLC+NF KGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSGPPK--THGMPGAAAPPGSNYKTKLCENFTKGSCTFGERCHFAHGAAELRKSGV 291

[Close]

BLAST of CsGy3G034010 vs. TrEMBL
Match: tr|A0A2I4HVP9|A0A2I4HVP9_9ROSI (zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=LOC109021933 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 9.9e-123
Identity = 229/296 (77.36%), Postives = 252/296 (85.14%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR E GL ANGG KK KQ+M+  STGV SKSKPCTKF+ST GCPFGE+CHFLHY
Sbjct: 1   MDTRKRGRPEAGLNANGGFKKFKQEMD--STGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           V GGYNAVAQMMNL PA PA     A PP + NGSA  +VK+RMCNKYN+AEGCKFGDKC
Sbjct: 61  VTGGYNAVAQMMNLAPAVPAASRNMAGPPTIQNGSA-PSVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELGKP APSHDDPRSMG IP R+  RM+  PPG AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHNEWELGKPIAPSHDDPRSMGPIPGRMGGRMEPPPPGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICR+TGAKLSIR+HESDPNLRNIELEG+F+QIKEASAMV++LIVTVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIKEASAMVRQLIVTVS 240

Query: 241 MAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           ++GPPK  T           +NFKTKLC+NF+KGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSGPPK--THGMTGAAAPAGSNFKTKLCENFSKGSCTFGERCHFAHGAAELRKSGV 291

[Close]

BLAST of CsGy3G034010 vs. TrEMBL
Match: tr|F6HLJ6|F6HLJ6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g06400 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 9.2e-121
Identity = 218/297 (73.40%), Postives = 245/297 (82.49%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR    L ANGG KK+KQ++E LSTG+ SKSKPCTKF+ST+GCPFGE+CHFLHY
Sbjct: 1   MDTRKRGRPGGALNANGGFKKSKQEVESLSTGIGSKSKPCTKFFSTSGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPP-APPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 120
           VPGGYNAVAQM N  P  PPA RNM  PPPP+ NGS+  AVKS+MCNK+N+AEGCKFGDK
Sbjct: 61  VPGGYNAVAQMTNQAPILPPASRNMAGPPPPVPNGSSMPAVKSKMCNKFNTAEGCKFGDK 120

Query: 121 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASL 180
           CHFAH EWELGKP AP HDDPR+MG IP RLA R++  P G AASFGAS+TAKISVDASL
Sbjct: 121 CHFAHGEWELGKPLAPYHDDPRAMGSIPGRLAGRIEPSPTGPAASFGASATAKISVDASL 180

Query: 181 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 240
           AGAIIGKGG+NSKQICR+TGAKLSIR+H+SDPNLRNIELEG+F+QIKEASAMV+ELIV +
Sbjct: 181 AGAIIGKGGVNSKQICRQTGAKLSIREHDSDPNLRNIELEGTFEQIKEASAMVRELIVNI 240

Query: 241 SMAGPPKSATGXXXXXXXXXXNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           S        T           +N+KTKLCDNF KGSCTFGERCHFAHGA ELRKS +
Sbjct: 241 SAMPGHARTTAMPGGGQAPPASNYKTKLCDNFTKGSCTFGERCHFAHGAGELRKSAI 297

The following BLAST results are available for this feature:

BLAST of CsGy3G034010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136573.1	1.1e-160	100.00	PREDICTED: zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN5...	[more]
XP_008443064.1	1.8e-152	92.23	PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo]	[more]
XP_022158356.1	6.9e-136	84.75	zinc finger CCCH domain-containing protein 14-like [Momordica charantia]	[more]
XP_023526424.1	1.3e-134	82.03	zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983050.1	1.2e-132	80.34	zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima]	[more]

BLAST of CsGy3G034010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12130.1	1.3e-67	48.85	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT5G06770.1	6.3e-67	49.16	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G19360.1	3.1e-05	25.66	Zinc finger (CCCH-type) family protein	[more]

BLAST of CsGy3G034010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7F8R0\|C3H14_ORYSJ	3.4e-86	60.00	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q7XPK1\|C3H31_ORYSJ	7.9e-83	59.02	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q69XQ3\|C3H44_ORYSJ	1.1e-79	57.34	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q9C7C3\|C3H36_ARATH	2.3e-66	48.85	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9FG30\|C3H52_ARATH	1.1e-65	49.16	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsGy3G034010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LEG5\|A0A0A0LEG5_CUCSA	7.0e-161	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1	[more]
tr\|A0A1S3B785\|A0A1S3B785_CUCME	1.2e-152	92.23	zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A2I4DFQ7\|A0A2I4DFQ7_9ROSI	7.5e-123	77.03	zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=...	[more]
tr\|A0A2I4HVP9\|A0A2I4HVP9_9ROSI	9.9e-123	77.36	zinc finger CCCH domain-containing protein 14-like OS=Juglans regia OX=51240 GN=...	[more]
tr\|F6HLJ6\|F6HLJ6_VITVI	9.2e-121	73.40	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g06400 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036855	Znf_CCCH_sf
IPR004088	KH_dom_type_1
IPR036612	KH_dom_type_1_sf
IPR000571	Znf_CCCH
IPR004087	KH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G034010.1	CsGy3G034010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 167..237 e-value: 1.9E-12 score: 57.3
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 101..126 e-value: 0.64 score: 17.8 coord: 262..288 e-value: 1.7E-7 score: 40.9 coord: 34..61 e-value: 0.5 score: 18.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 263..287 e-value: 2.9E-9 score: 36.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 99..127 score: 12.436
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 262..289 score: 16.164
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 34..62 score: 12.389
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 105..124 e-value: 0.044 score: 14.2 coord: 42..59 e-value: 3.8 score: 8.0
None	No IPR available	GENE3D	G3DSA:4.10.1000.10		coord: 259..294 e-value: 5.2E-13 score: 50.2 coord: 94..131 e-value: 5.2E-9 score: 37.4
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 1..295
None	No IPR available	PANTHER	PTHR10288:SF5	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 36-RELATED	coord: 1..295
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 168..232 score: 14.739
None	No IPR available	CDD	cd00105	KH-I	coord: 170..233 e-value: 2.43054E-15 score: 67.9703
IPR036612	K Homology domain, type 1 superfamily	GENE3D	G3DSA:3.30.1370.10		coord: 166..239 e-value: 1.3E-14 score: 55.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 158..238
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 171..234 e-value: 1.3E-12 score: 47.2
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	SSF90229	CCCH zinc finger	coord: 99..129
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	SSF90229	CCCH zinc finger	coord: 262..292
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	SSF90229	CCCH zinc finger	coord: 34..61

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G034010	Cla017537	Watermelon (97103) v1	cgybwmB187
CsGy3G034010	Csa3G808380	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G034010	MELO3C009632	Melon (DHL92) v3.5.1	cgybmeB184
CsGy3G034010	ClCG10G017470	Watermelon (Charleston Gray)	cgybwcgB179
CsGy3G034010	CSPI03G36540	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G034010	CmaCh14G004220	Cucurbita maxima (Rimu)	cgybcmaB306
CsGy3G034010	CmoCh14G004270	Cucurbita moschata (Rifu)	cgybcmoB279
CsGy3G034010	Lsi03G017280	Bottle gourd (USVL1VR-Ls)	cgyblsiB171
CsGy3G034010	Cp4.1LG03g03910	Cucurbita pepo (Zucchini)	cgybcpeB395
CsGy3G034010	MELO3C009632.2	Melon (DHL92) v3.6.1	cgybmedB185
CsGy3G034010	CsaV3_3G038890	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G034010	Cla97C10G200320	Watermelon (97103) v2	cgybwmbB178
CsGy3G034010	Bhi11G002193	Wax gourd	cgybwgoB214
CsGy3G034010	Carg03566	Silver-seed gourd	carcgybB0263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G034010	Cucurbita maxima (Rimu)	cgybcmaB439
CsGy3G034010	Cucurbita moschata (Rifu)	cgybcmoB410
CsGy3G034010	Cucurbita pepo (Zucchini)	cgybcpeB457
CsGy3G034010	Silver-seed gourd	carcgybB0167