CSPI03G36540 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G36540
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionZinc finger CCCH domain-containing protein
LocationChr3 : 31743634 .. 31746777 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATTTTTTCCCACCGAAAGAGTTCTCATCCTTTCACTCACTTTCATATTTGCAAAACCCTTCCCTCTCTTTTAGGGTTGGAGTTAGGGTTTTCGATTCATTCTTTTTTTTTTTTTGTAGCATTTAGAATTTTTAATCTTATCGTTTTAGACGTATTCTTTTCGAGTTCTTTAGTTTGTTGTGGATCTCGATCTGGGTTTATTACCAATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGGTTTCTTCCTCCTTCCCTTCCTTCTTTTACTTCTCAATTTCACTACTTTTTTAAACTTCTTGAGCTCTACTGTATGTATTACTTTGTCCTGTTTCTGTCCAGATTTTTGTATCAACTATAGGTTCGTAGTTCAATGTTAAGCAATCGATGGCGGTCATTCTATTTCGTTTACTTTTGTTATTTTTGGTGGTGGGGTTTTTTTTTTCTTTTTTTTTTGGGGGGGGGGGGGGTGCGGTTTCTGAATTCGGATTTAGAATTACAGATTTGTGGGTTTGAGTTTGCTGAAACTTTGCTTGTGAACTTCCTACGTGGGAAAGATTTAAGAAGCTATAAAGGGTTTAAACTATTTTGTGATGCCAGCTAAAGAATAAAAAACTTCGTGAAAGGTCAAAGATACTGTTCTAACAAATAGGATAATTTGTTAAAGAAACTAATGAGTATTGATTGATAATTGATCATAATATGACTTTTTGAACAATTTCAAACATTTAGGTGCATAAATTGTTGGTTTTCCCATAAATTTGTTAACTGCAGGGGGTACTATAACTGTGAAAGCCACCCCACCTAATTGAGACCACCTGAATATACATACAGAGACATTAAAATCTTATACGGGCATATTAAATCTTAAGTTATTTGTTGGTTAGCAGTTCATAAACTCTCAGGCATTTTAGAGTAATTAAATTAAACTCTAGGAAAATTGACTAAGAAAACAATAATAAATTTTTTGTAACAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGGTTCAAATCTTCACTCATCTAAATAAATACATAGAAACTTATCCTTTTCTGAATCTTTATAAATTATTGTAAGAATCTAATTTTCTGAATCTCTATAATTTTGCTCATGAAAGAGACAAATTGCATACGTGTAAAATCTATTTATTGTCTAACTATATAAATATCTCTTTAAGTATAAAAGACTTAACCACTATTTAGAGTGTAACTTCTATGGAGATCAACAGTGATACTTATTCCTGTGAAAAGGAAAATTGAACTGGGAAGTGGTGATATTTTCTCCAGCTTATACTGATCATTACAATTTTTCTCTAAAATCTTTCTGGCAAGTCTATGTCTTGTTAATAGATGTCACAAATACTTGGTTCGCAGGGTTTCTTTTTACGTGATTATTTTTGTGTCAAGTGTTATTTATGGGTAGTGCTCGTTAATTACTCAAACACTGTCCTTATTGGCACTTTACAGAGGATGCCTTTGAACTGTACATTCTGAAAGTGCTTTAATGTACTTGTTTGTGTATGAATCTTCTCAAATTTATTGGAACCAGTTTTTACAGACTCTGTGAGATATATAATGAATATTCTTCTCTCTTATCTAAATTATTCTTGGTGAACCCTACTTTTGATATTTCAGAATCTCTGTTTGCAAATTCTTTTCTGCTGCTCATAAGGTTGTGAATTAGCACCTCCATTACAGCCTTACCTGAATAGGATTTACTCGACATGTTTTATAACTGTCTTTTGAGTTATTTTTCACTGAATCAAGCTGCTGCAATTTCAGGATCTCCATTATATGTTTTATTTTTCTCCCTATTTATGCTATCTTTCACTAATGAGTGGAGGAATAATAAAATATCAACATTTATTTTCCGTTGCTTATGATTTTGACTATCATTTTTGTTTCTTTTGCAAAATACGGAGCATAATTATTTTAAAACTGAATCTAAACAATGGAAGTGTGTCTGATATTCATCTTTTTGTGCAATTGATGTCAAAAGCTTTCAATTTGTCATGCATATGAAATGAGTTCGTCTTACATATGTGGAGAATATCCGTAGACTGATTGTTTCTATTTTGTTTTCAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCTGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAATTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCTATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATTGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCTGCCGAATTGCGCAAATCTGGCGTGTGAAGAAATCCGTTTTTCTTATTTTCTTCTTTTTACCCCCAAATTTAGTGTTGTAGCGTAAGCCTTTGGTTCAGTTATTTGTATTAGATAAAGGTATCTATCTTGAATTATGGATGAACAGGGCAATGCAACTCAGTGGAAATTGACAGTTTTTATTATGGTTAAGAGAAAGTCAAAATTACAGTTTTGAAGACCCCATTCCTATCCAATATTCGTTTCATTCTCATTCTCCC

mRNA sequence

ATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCTGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAATTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCTATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATTGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCTGCCGAATTGCGCAAATCTGGCGTGTGA

Coding sequence (CDS)

ATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCTGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAATTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCTATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATTGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCTGCCGAATTGCGCAAATCTGGCGTGTGA
Homology
[Close]
BLAST of CSPI03G36540 vs. Swiss-Prot
Match: C3H14_ORYSJ (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.7e-88
Identity = 186/305 (60.98%), Postives = 214/305 (70.16%), Query Frame = 1 

Query: 4   RKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPG 63
           RKRG+ +    ANG   K  ++ E   TGV SKSKPCTKF+ST+GCPFGE CHFLH+ PG
Sbjct: 6   RKRGKPD---GANGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNAVAQMMNL--PPAPPAPRNMGAPPPPMSN----GSATQAVKSRMCNKYNSAEGCKFG 123
           GY AVA+M NL  P   P P  M     PM N    G  T  VK+R+CNKYN+AEGCK+G
Sbjct: 66  GYQAVAKMTNLGGPAIAPPPGRM-----PMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWG 125

Query: 124 DKCHFAHAEWELGKP-----SAPSHDDPRSMGHI-PNRLASRMDAGPPGLAASFGASSTA 183
           DKCHFAH E ELGKP     S P    PR  GH  P  + S   + P    ASFGAS+TA
Sbjct: 126 DKCHFAHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSPAMSTP----ASFGASATA 185

Query: 184 KISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAM 243
           KISVDASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+NIELEG+FDQIK ASAM
Sbjct: 186 KISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAM 245

Query: 244 VQELIVTVSMAGPP--KSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAA 295
           V+ELIV++    PP  K   G +    GP G+NFKTKLC+NF KGSCTFG+RCHFAHG  
Sbjct: 246 VRELIVSIGGGAPPQGKKPVGGSHRGGGP-GSNFKTKLCENFTKGSCTFGDRCHFAHGEN 297

[Close]
BLAST of CSPI03G36540 vs. Swiss-Prot
Match: C3H31_ORYSJ (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.2e-85
Identity = 178/305 (58.36%), Postives = 209/305 (68.52%), Query Frame = 1 

Query: 4   RKRGRAEVGLKANGGLK--KNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYV 63
           RKR R +    ANGG    K  ++ E   TG++SK KPCTKF+ST GCPFGE CHF H+V
Sbjct: 8   RKRSRPDT---ANGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFV 67

Query: 64  PGGYNAVAQMMNLP-PAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 123
           PGGY AVA+ +NL  PA PAP           N     + K+RMC KYN+AEGCKFGDKC
Sbjct: 68  PGGYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKC 127

Query: 124 HFAHAEWELGKPSAPSHDDPRS--MGHIPNRLASRMDAGPPGL----AASFGASSTAKIS 183
           HFAH E ELGKP+  SH+   +  MG    R   R +  PP      A +FGAS+TAKIS
Sbjct: 128 HFAHGERELGKPAYMSHESAMAPPMG---GRYGGRPEPPPPAAMGPPAGNFGASATAKIS 187

Query: 184 VDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQE 243
           VDASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+NIELEG+FDQIK+AS MV E
Sbjct: 188 VDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGE 247

Query: 244 LIVTVSMAGPPKSATGATGGTA-----GPAG-NNFKTKLCDNFAKGSCTFGERCHFAHGA 294
           LI T+S + P K   G+  G A     GP G +N+KTKLC+NF KG+CTFG+RCHFAHG 
Sbjct: 248 LIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGE 306

[Close]
BLAST of CSPI03G36540 vs. Swiss-Prot
Match: C3H44_ORYSJ (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.5e-81
Identity = 168/286 (58.74%), Postives = 196/286 (68.53%), Query Frame = 1 

Query: 14  KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMN 73
           +   G  K  +  E    GV SK KPCTKF+ST+GCPFG +CHFLH  PGGY A A+M +
Sbjct: 12  EGTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTS 71

Query: 74  ----LPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWEL 133
                  APP    +G   P   NG  T +VK+RMCNKYN+AEGCK+G KCHFAH E EL
Sbjct: 72  HGGTAVAAPPGRMPLGPGAP---NGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGEREL 131

Query: 134 GKPSAPSHDDPRSMGHIPNRLASRM--DAGPPGLAASFGASSTAKISVDASLAGAIIGKG 193
           GKP    +  P  MG +P         D  PP   ++FGAS+TAKISVDASLAG IIGKG
Sbjct: 132 GKPMLLDNSMPHPMGSMPFEAPPMPGPDIVPP---STFGASATAKISVDASLAGGIIGKG 191

Query: 194 GINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKS 253
           G N+K I R TGAKL+IRD+ES+PNL+NIELEG+FDQIK ASAMV ELIV +S   PP  
Sbjct: 192 GTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAK 251

Query: 254 ATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRK 294
             G  G  AG  G+NFKTKLC+NF KGSCTFG+RCHFAHG +ELRK
Sbjct: 252 NPG-RGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290

[Close]
BLAST of CSPI03G36540 vs. Swiss-Prot
Match: C3H36_ARATH (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.1e-50
Identity = 113/221 (51.13%), Postives = 145/221 (65.61%), Query Frame = 1 

Query: 91  MSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAH-------AEWELGKPSAPSHDDPRSM 150
           M + S     KS+ C K+ S  GC FG+ CHF H       A  ++     P     R+M
Sbjct: 28  MESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNM 87

Query: 151 GHIPN--RLASRMDAGPPGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAK 210
               N  R + R ++GP G  ++FG S+TA+ SVDASLAGAIIGKGG++SKQICR+TG K
Sbjct: 88  QGSGNGGRFSGRGESGP-GHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVK 147

Query: 211 LSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAG--PPKSATGATGGTAGPA 270
           LSI+DHE DPNL+NI LEG+ +QI EASAMV++LI  ++ A   PP    G  GG     
Sbjct: 148 LSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEG 207

Query: 271 ----GNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
               G+NFKTK+C+ F+KG+CTFG+RCHFAHG AELRKSG+
Sbjct: 208 KPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAELRKSGI 247

[Close]
BLAST of CSPI03G36540 vs. Swiss-Prot
Match: C3H52_ARATH (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana GN=At5g06770 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.0e-47
Identity = 109/206 (52.91%), Postives = 136/206 (66.02%), Query Frame = 1 

Query: 101 KSRMCNKYNSAEGCKFGDKCHFAH-------AEWELGKPSAPSHDDPRSM---GHIPNRL 160
           KS+ C K+ S  GC FGD CHF H       A  ++     P     R+M   G    R 
Sbjct: 38  KSKPCTKFFSTSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNMQGSGGPGGRF 97

Query: 161 ASRMDAGPPGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESD 220
           + R D G  G  + FGAS T+KISVDASLAGAIIGKGGI+SKQICR TGAKLSI+DHE D
Sbjct: 98  SGRGDPGS-GPVSIFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERD 157

Query: 221 PNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKSATGATGGTAGPAGNNFKTKLCDN 280
           PNL+ IELEG+F+QI  AS MV+ELI  +     P+   G  G      G+N+KTK+CD 
Sbjct: 158 PNLKIIELEGTFEQINVASGMVRELIGRLGSVKKPQGIGGPEG--KPHPGSNYKTKICDR 217

Query: 281 FAKGSCTFGERCHFAHGAAELRKSGV 297
           ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 218 YSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]
BLAST of CSPI03G36540 vs. TrEMBL
Match: A0A0A0LEG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808380 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.2e-167
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1 

Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296

[Close]
BLAST of CSPI03G36540 vs. TrEMBL
Match: M5W9V3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009316mg PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 4.8e-124
Identity = 227/297 (76.43%), Postives = 255/297 (85.86%), Query Frame = 1 

Query: 1   MDTRKRGRAEVG-LKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLH 60
           MDTRKRGR E G   ANGG KKNKQ++E  STGV SKSKPCTKF+ST GCPFGE+CHFLH
Sbjct: 2   MDTRKRGRHEAGAFHANGGFKKNKQELESFSTGVGSKSKPCTKFFSTAGCPFGESCHFLH 61

Query: 61  YVPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 120
           YVPGGYNAVAQMMNL PAP A RN+ APPP  SNGS++ AVKSR+CNKYNSAEGCKFGDK
Sbjct: 62  YVPGGYNAVAQMMNLAPAPQASRNI-APPPSNSNGSSSSAVKSRLCNKYNSAEGCKFGDK 121

Query: 121 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASL 180
           CHFAH EWELGK  A SHDDPR+MG  P R+ + M+    G A+SFGASSTAKISVDASL
Sbjct: 122 CHFAHGEWELGKHLAQSHDDPRAMGPGPGRMTNWMEPPLAGPASSFGASSTAKISVDASL 181

Query: 181 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 240
           AGAIIGKGG+NSKQICR+TGAKLSIR+HESDPNLRNIELEG+F+QI++ASAMV+ELIVTV
Sbjct: 182 AGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIQQASAMVRELIVTV 241

Query: 241 SMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           SM+GP K+  G   G   P G+N+KTKLCDNF KG+CTFG+RCHFAHGAAELRKSG+
Sbjct: 242 SMSGPAKTPGGGAPGAPAPPGSNYKTKLCDNFTKGTCTFGDRCHFAHGAAELRKSGM 297

[Close]
BLAST of CSPI03G36540 vs. TrEMBL
Match: F6HLJ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06400 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 7.0e-123
Identity = 221/297 (74.41%), Postives = 248/297 (83.50%), Query Frame = 1 

Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR    L ANGG KK+KQ++E LSTG+ SKSKPCTKF+ST+GCPFGE+CHFLHY
Sbjct: 1   MDTRKRGRPGGALNANGGFKKSKQEVESLSTGIGSKSKPCTKFFSTSGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPA-PPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 120
           VPGGYNAVAQM N  P  PPA RNM  PPPP+ NGS+  AVKS+MCNK+N+AEGCKFGDK
Sbjct: 61  VPGGYNAVAQMTNQAPILPPASRNMAGPPPPVPNGSSMPAVKSKMCNKFNTAEGCKFGDK 120

Query: 121 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASL 180
           CHFAH EWELGKP AP HDDPR+MG IP RLA R++  P G AASFGAS+TAKISVDASL
Sbjct: 121 CHFAHGEWELGKPLAPYHDDPRAMGSIPGRLAGRIEPSPTGPAASFGASATAKISVDASL 180

Query: 181 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 240
           AGAIIGKGG+NSKQICR+TGAKLSIR+H+SDPNLRNIELEG+F+QIKEASAMV+ELIV +
Sbjct: 181 AGAIIGKGGVNSKQICRQTGAKLSIREHDSDPNLRNIELEGTFEQIKEASAMVRELIVNI 240

Query: 241 SMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           S        T   GG   P  +N+KTKLCDNF KGSCTFGERCHFAHGA ELRKS +
Sbjct: 241 SAMPGHARTTAMPGGGQAPPASNYKTKLCDNFTKGSCTFGERCHFAHGAGELRKSAI 297

[Close]
BLAST of CSPI03G36540 vs. TrEMBL
Match: B9T5D8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0098170 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 9.5e-120
Identity = 221/297 (74.41%), Postives = 249/297 (83.84%), Query Frame = 1 

Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR +    ANGG KK+K++M+ LSTGV SKSKPCTKF+ST GCPFGE+CHFLHY
Sbjct: 2   MDTRKRGRND--FNANGGFKKSKREMDSLSTGVGSKSKPCTKFFSTAGCPFGESCHFLHY 61

Query: 61  VPGGYNAVAQMMNLPPAPPA-PRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 120
           VPGGYNAVAQMMNL PA  + PRNM AP P + NGSA  AVKSRMCNKYN+ EGCKFGDK
Sbjct: 62  VPGGYNAVAQMMNLGPAVTSVPRNMPAPSPAIPNGSAPSAVKSRMCNKYNTVEGCKFGDK 121

Query: 121 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASL 180
           C+FAH EWELGK  APSHDDPR+ G    R+  RM+  PPG AASFGAS+TAKISV+ASL
Sbjct: 122 CNFAHGEWELGKSMAPSHDDPRAFGTFAGRMGGRMEPPPPGPAASFGASATAKISVEASL 181

Query: 181 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 240
           AGAIIGKGG+NSKQICR+TGAKLSIR+HE+DPNLRNIE EGSF+QIK+ASAMV ELI ++
Sbjct: 182 AGAIIGKGGVNSKQICRQTGAKLSIREHETDPNLRNIEFEGSFEQIKQASAMVSELIASI 241

Query: 241 SMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           S       ATG TGG   P G+NFKTKLC+NF+KGSCTFG+RCHFAHGAAELRKSGV
Sbjct: 242 SSVNASAKATGLTGGHGHP-GSNFKTKLCENFSKGSCTFGQRCHFAHGAAELRKSGV 295

[Close]
BLAST of CSPI03G36540 vs. TrEMBL
Match: A0A0A0KZ79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.2e-119
Identity = 224/307 (72.96%), Postives = 251/307 (81.76%), Query Frame = 1 

Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MD RKRGR E    +NG  KK+KQ++E LST V SKSKPCTKF+ST GCPFGE+CHFLHY
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNG--SATQAVKSRMCNKYNSAEGCKFGD 120
           VPGGYN VAQMMNL P    P    A PP ++NG  SA   VK+RMCNKYN+AEGCKFGD
Sbjct: 61  VPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGD 120

Query: 121 KCHFAHAEWELGKPSAPSHDDPRSMG---------HIPNRLASRMDAGPPGLAASFGASS 180
           KC+FAH EWELG+P+ PSHD+PR+MG         H+  R+  RMD  PPG AASFGAS+
Sbjct: 121 KCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASA 180

Query: 181 TAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEAS 240
           TAKIS+DASLAGAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+F+QI EAS
Sbjct: 181 TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEAS 240

Query: 241 AMVQELIVTVSMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAA 297
           AMV+ELI+TVSMAGP K A+G  GG   P G+N+KTKLCDNFAKGSCTFGERCHFAHGAA
Sbjct: 241 AMVRELIITVSMAGPGK-ASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAA 300

[Close]
BLAST of CSPI03G36540 vs. TAIR10
Match: AT3G12130.1 (AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-51
Identity = 113/221 (51.13%), Postives = 145/221 (65.61%), Query Frame = 1 

Query: 91  MSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAH-------AEWELGKPSAPSHDDPRSM 150
           M + S     KS+ C K+ S  GC FG+ CHF H       A  ++     P     R+M
Sbjct: 28  MESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNM 87

Query: 151 GHIPN--RLASRMDAGPPGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAK 210
               N  R + R ++GP G  ++FG S+TA+ SVDASLAGAIIGKGG++SKQICR+TG K
Sbjct: 88  QGSGNGGRFSGRGESGP-GHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVK 147

Query: 211 LSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAG--PPKSATGATGGTAGPA 270
           LSI+DHE DPNL+NI LEG+ +QI EASAMV++LI  ++ A   PP    G  GG     
Sbjct: 148 LSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEG 207

Query: 271 ----GNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
               G+NFKTK+C+ F+KG+CTFG+RCHFAHG AELRKSG+
Sbjct: 208 KPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAELRKSGI 247

[Close]
BLAST of CSPI03G36540 vs. TAIR10
Match: AT5G06770.1 (AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-48
Identity = 109/206 (52.91%), Postives = 136/206 (66.02%), Query Frame = 1 

Query: 101 KSRMCNKYNSAEGCKFGDKCHFAH-------AEWELGKPSAPSHDDPRSM---GHIPNRL 160
           KS+ C K+ S  GC FGD CHF H       A  ++     P     R+M   G    R 
Sbjct: 38  KSKPCTKFFSTSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNMQGSGGPGGRF 97

Query: 161 ASRMDAGPPGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESD 220
           + R D G  G  + FGAS T+KISVDASLAGAIIGKGGI+SKQICR TGAKLSI+DHE D
Sbjct: 98  SGRGDPGS-GPVSIFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERD 157

Query: 221 PNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKSATGATGGTAGPAGNNFKTKLCDN 280
           PNL+ IELEG+F+QI  AS MV+ELI  +     P+   G  G      G+N+KTK+CD 
Sbjct: 158 PNLKIIELEGTFEQINVASGMVRELIGRLGSVKKPQGIGGPEG--KPHPGSNYKTKICDR 217

Query: 281 FAKGSCTFGERCHFAHGAAELRKSGV 297
           ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 218 YSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]
BLAST of CSPI03G36540 vs. TAIR10
Match: AT3G19360.1 (AT3G19360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07
Identity = 36/115 (31.30%), Postives = 51/115 (44.35%), Query Frame = 1 

Query: 36  KSKPCTKFYSTTGCPFGEACHFLH-----------------YVPGGYNAVAQMMNLPPAP 95
           + K C KF     CP+G+ C+F+H                  +  G  A  Q  +     
Sbjct: 185 RMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNL 244

Query: 96  PAPRNMGA--PPPPMSNGSATQAV--KSRMCNKYNSAEGCKFGDKCHFAHAEWEL 130
                 G+   P PM+NG   + V  K+R+C K++    C FGDKCHFAH + EL
Sbjct: 245 IEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAEL 299

[Close]
BLAST of CSPI03G36540 vs. TAIR10
Match: AT1G32360.1 (AT1G32360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 52/198 (26.26%), Postives = 78/198 (39.39%), Query Frame = 1 

Query: 31  TGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPP 90
           +G + K + C KFY+  GCP+GE+C FLH      N  +  ++L P        G     
Sbjct: 169 SGRSFKGRHCKKFYTEEGCPYGESCTFLHD-EASRNRESVAISLGPGGYGSGGGGGSGGG 228

Query: 91  M--SNGSATQAV----------------------KSRMCNKYNSAEGCKFGDKCHFAHAE 150
                GS++  V                      K+R+CNK+     C FG KCHFAH  
Sbjct: 229 SVGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGA 288

Query: 151 WEL-----------GKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISV 194
            EL           GK     + D +     P  L+       PG+  +  AS    +++
Sbjct: 289 AELHRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVAL 348

[Close]
BLAST of CSPI03G36540 vs. TAIR10
Match: AT2G35430.1 (AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 39/110 (35.45%), Postives = 52/110 (47.27%), Query Frame = 1 

Query: 36  KSKPCTKFYSTTGCPFG-EACHFLHYVPGGYNAVAQMMNLPPAPP---------APRNMG 95
           K+K C KF + T CP+   +CHF H         A+ + LPP PP         A RN  
Sbjct: 73  KTKLCFKFRAGT-CPYSASSCHFAHS--------AEELRLPPPPPPNWQETVTEASRNRE 132

Query: 96  APPPPMS-NGSATQAVKS-----RMCNKYNSAEGCKFGDKCHFAHAEWEL 130
           +    +   G+  Q +KS     R+CNK+ +   C FG  CHFAH   EL
Sbjct: 133 SFAVSLGPRGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSEL 173

[Close]
BLAST of CSPI03G36540 vs. NCBI nr
Match: gi|449437587|ref|XP_004136573.1| (PREDICTED: zinc finger CCCH domain-containing protein 14 [Cucumis sativus])

HSP 1 Score: 597.0 bits (1538), Expect = 1.7e-167
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1 

Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296

[Close]
BLAST of CSPI03G36540 vs. NCBI nr
Match: gi|659084769|ref|XP_008443064.1| (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 569.7 bits (1467), Expect = 3.0e-159
Identity = 283/296 (95.61%), Postives = 289/296 (97.64%), Query Frame = 1 

Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGGLKK+KQ+MEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGAPPP MSNGSATQ VKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPP-MSNGSATQVVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRS+GHIPNRLA+RMDA PP LAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELI+TVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSA GATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG+
Sbjct: 241 MAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGM 295

[Close]
BLAST of CSPI03G36540 vs. NCBI nr
Match: gi|645271493|ref|XP_008240939.1| (PREDICTED: zinc finger CCCH domain-containing protein 14 [Prunus mume])

HSP 1 Score: 453.4 bits (1165), Expect = 3.1e-124
Identity = 228/297 (76.77%), Postives = 255/297 (85.86%), Query Frame = 1 

Query: 1   MDTRKRGRAEVG-LKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLH 60
           MDTRKRGR E G   ANGG KKNKQ++E  STGV SKSKPCTKF+ST GCPFGE+CHFLH
Sbjct: 2   MDTRKRGRHEAGAFHANGGFKKNKQELESFSTGVGSKSKPCTKFFSTAGCPFGESCHFLH 61

Query: 61  YVPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 120
           YVPGGYNAVAQMMNL PAP A RN+ APPP  SNGS++ AVKSR+CNKYNSAEGCKFGDK
Sbjct: 62  YVPGGYNAVAQMMNLAPAPQASRNI-APPPSNSNGSSSSAVKSRLCNKYNSAEGCKFGDK 121

Query: 121 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASL 180
           CHFAH EWELGK  A SHDDPR+MG  P R+ + M+    G A+SFGASSTAKISVDASL
Sbjct: 122 CHFAHGEWELGKHLAQSHDDPRAMGPGPGRMTNWMEPPLAGPASSFGASSTAKISVDASL 181

Query: 181 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 240
           AGAIIGKGG+NSKQICR+TGAKLSIR+HESDPNLRNIELEG+F+QI++ASAMV+ELIVTV
Sbjct: 182 AGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIQQASAMVRELIVTV 241

Query: 241 SMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           SM+GP K+  G   G   P G+N+KTKLCDNF KG+CTFGERCHFAHGAAELRKSG+
Sbjct: 242 SMSGPAKTPGGGAPGAPAPPGSNYKTKLCDNFTKGTCTFGERCHFAHGAAELRKSGM 297

[Close]
BLAST of CSPI03G36540 vs. NCBI nr
Match: gi|595805980|ref|XP_007202376.1| (hypothetical protein PRUPE_ppa009316mg [Prunus persica])

HSP 1 Score: 452.2 bits (1162), Expect = 7.0e-124
Identity = 227/297 (76.43%), Postives = 255/297 (85.86%), Query Frame = 1 

Query: 1   MDTRKRGRAEVG-LKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLH 60
           MDTRKRGR E G   ANGG KKNKQ++E  STGV SKSKPCTKF+ST GCPFGE+CHFLH
Sbjct: 2   MDTRKRGRHEAGAFHANGGFKKNKQELESFSTGVGSKSKPCTKFFSTAGCPFGESCHFLH 61

Query: 61  YVPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 120
           YVPGGYNAVAQMMNL PAP A RN+ APPP  SNGS++ AVKSR+CNKYNSAEGCKFGDK
Sbjct: 62  YVPGGYNAVAQMMNLAPAPQASRNI-APPPSNSNGSSSSAVKSRLCNKYNSAEGCKFGDK 121

Query: 121 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASL 180
           CHFAH EWELGK  A SHDDPR+MG  P R+ + M+    G A+SFGASSTAKISVDASL
Sbjct: 122 CHFAHGEWELGKHLAQSHDDPRAMGPGPGRMTNWMEPPLAGPASSFGASSTAKISVDASL 181

Query: 181 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 240
           AGAIIGKGG+NSKQICR+TGAKLSIR+HESDPNLRNIELEG+F+QI++ASAMV+ELIVTV
Sbjct: 182 AGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIQQASAMVRELIVTV 241

Query: 241 SMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           SM+GP K+  G   G   P G+N+KTKLCDNF KG+CTFG+RCHFAHGAAELRKSG+
Sbjct: 242 SMSGPAKTPGGGAPGAPAPPGSNYKTKLCDNFTKGTCTFGDRCHFAHGAAELRKSGM 297

[Close]
BLAST of CSPI03G36540 vs. NCBI nr
Match: gi|225441425|ref|XP_002279071.1| (PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis vinifera])

HSP 1 Score: 448.4 bits (1152), Expect = 1.0e-122
Identity = 221/297 (74.41%), Postives = 248/297 (83.50%), Query Frame = 1 

Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR    L ANGG KK+KQ++E LSTG+ SKSKPCTKF+ST+GCPFGE+CHFLHY
Sbjct: 1   MDTRKRGRPGGALNANGGFKKSKQEVESLSTGIGSKSKPCTKFFSTSGCPFGESCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPA-PPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDK 120
           VPGGYNAVAQM N  P  PPA RNM  PPPP+ NGS+  AVKS+MCNK+N+AEGCKFGDK
Sbjct: 61  VPGGYNAVAQMTNQAPILPPASRNMAGPPPPVPNGSSMPAVKSKMCNKFNTAEGCKFGDK 120

Query: 121 CHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASL 180
           CHFAH EWELGKP AP HDDPR+MG IP RLA R++  P G AASFGAS+TAKISVDASL
Sbjct: 121 CHFAHGEWELGKPLAPYHDDPRAMGSIPGRLAGRIEPSPTGPAASFGASATAKISVDASL 180

Query: 181 AGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTV 240
           AGAIIGKGG+NSKQICR+TGAKLSIR+H+SDPNLRNIELEG+F+QIKEASAMV+ELIV +
Sbjct: 181 AGAIIGKGGVNSKQICRQTGAKLSIREHDSDPNLRNIELEGTFEQIKEASAMVRELIVNI 240

Query: 241 SMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           S        T   GG   P  +N+KTKLCDNF KGSCTFGERCHFAHGA ELRKS +
Sbjct: 241 SAMPGHARTTAMPGGGQAPPASNYKTKLCDNFTKGSCTFGERCHFAHGAGELRKSAI 297

The following BLAST results are available for this feature:
BLAST of CSPI03G36540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H14_ORYSJ4.7e-8860.98Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN... [more]
C3H31_ORYSJ2.2e-8558.36Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN... [more]
C3H44_ORYSJ1.5e-8158.74Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica GN... [more]
C3H36_ARATH5.1e-5051.13Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana GN=At3g121... [more]
C3H52_ARATH4.0e-4752.91Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana GN=At5g067... [more]
BLAST of CSPI03G36540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEG5_CUCSA1.2e-167100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808380 PE=4 SV=1[more]
M5W9V3_PRUPE4.8e-12476.43Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009316mg PE=4 SV=1[more]
F6HLJ6_VITVI7.0e-12374.41Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06400 PE=4 SV=... [more]
B9T5D8_RICCO9.5e-12074.41Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0098170 PE=4 SV=1[more]
A0A0A0KZ79_CUCSA1.2e-11972.96Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507380 PE=4 SV=1[more]
BLAST of CSPI03G36540 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12130.12.9e-5151.13 KH domain-containing protein / zinc finger (CCCH type) family protei... [more]
AT5G06770.12.3e-4852.91 KH domain-containing protein / zinc finger (CCCH type) family protei... [more]
AT3G19360.13.3e-0731.30 Zinc finger (CCCH-type) family protein[more]
AT1G32360.11.6e-0626.26 Zinc finger (CCCH-type) family protein[more]
AT2G35430.13.7e-0635.45 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of CSPI03G36540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437587|ref|XP_004136573.1|1.7e-167100.00PREDICTED: zinc finger CCCH domain-containing protein 14 [Cucumis sativus][more]
gi|659084769|ref|XP_008443064.1|3.0e-15995.61PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo][more]
gi|645271493|ref|XP_008240939.1|3.1e-12476.77PREDICTED: zinc finger CCCH domain-containing protein 14 [Prunus mume][more]
gi|595805980|ref|XP_007202376.1|7.0e-12476.43hypothetical protein PRUPE_ppa009316mg [Prunus persica][more]
gi|225441425|ref|XP_002279071.1|1.0e-12274.41PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR004087KH_dom
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G36540.1CSPI03G36540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 35..59
score: 6.8E-8coord: 260..293
score: 1.4E-15coord: 98..131
score: 3.8
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 263..287
score: 2.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 101..126
score: 0.64coord: 34..61
score: 0.5coord: 262..288
score: 1.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 262..289
score: 16.164coord: 99..127
score: 12.436coord: 34..62
score: 12
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 34..61
score: 5.63E-6coord: 262..292
score: 3.4E-8coord: 99..129
score: 4.1
IPR004087K Homology domainSMARTSM00322kh_6coord: 167..237
score: 1.9
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 167..236
score: 1.3
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 170..234
score: 7.2
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 168..232
score: 14
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 158..238
score: 5.99
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 95..293
score: 3.7E
NoneNo IPR availablePANTHERPTHR10288:SF154SUBFAMILY NOT NAMEDcoord: 95..293
score: 3.7E