Carg03518 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03518
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	myb-related protein 306-like
Location	Cucurbita_argyrosperma_scaffold_006 : 391090 .. 392040 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGGTATATGAAAGTCCCTTTTGTTTATAATCCTTTCCCATTTACTTGATCTTATTGTTCTTGAGATTTTTGTTGTTGTTCTTAGGATTGTTGCGATGCAGCAAAAGTTGCAGGCTCCGGTGGACCAATTATCTCCGGCCGGGAATAAACAGAGGAAATTTCACTCCCCATGAGGAAGGAATGATCATTCATCTTCAAGCTTTATTGGGTAACAAGTAATGATCTTCTTATTGTTCTTTCTTCTTTTGATTTGCAGTTTCAATCATTTAATTGAAATCTGGGCTTTGAAATTCTCAGATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTACAGCCCGCCGCCGTTGATCCGCCGGAGCCGTCCGAGTCCGCCGGCGGTCAGTTACACTCCCAATGCTTGTCGCCGCCGCTCGCTGGAAACAGAGCATCCACCTACGCGTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGCCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCAATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTTTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTATGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAA

mRNA sequence

ATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTACAGCCCGCCGCCGTTGATCCGCCGGAGCCGTCCGAGTCCGCCGGCGGTCAGTTACACTCCCAATGCTTGTCGCCGCCGCTCGCTGGAAACAGAGCATCCACCTACGCGTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGCCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCAATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTTTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTATGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAA

Coding sequence (CDS)

ATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTACAGCCCGCCGCCGTTGATCCGCCGGAGCCGTCCGAGTCCGCCGGCGGTCAGTTACACTCCCAATGCTTGTCGCCGCCGCTCGCTGGAAACAGAGCATCCACCTACGCGTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGCCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCAATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTTTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTATGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAA

Protein sequence

MDAGRRYHSGLLHPRTRPRQLALRSHQHRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF

Homology

[Close]

BLAST of Carg03518 vs. NCBI nr
Match: XP_022934282.1 (myb-related protein 306-like [Cucurbita moschata])

HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97
Identity = 183/191 (95.81%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ AAVDPPEPSESAGGQ  SQCLSPPL
Sbjct: 87  NKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQSAAVDPPEPSESAGGQFQSQCLSPPL 146

Query: 88  AGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE 147
           A NRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE
Sbjct: 147 AENRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE 206

Query: 148 EFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQ 207
           EFDSILSFENWKNVS CEDKEEHVGEKQRFENAGA AVAATAPPLSFLEKWLFEEGATGQ
Sbjct: 207 EFDSILSFENWKNVSSCEDKEEHVGEKQRFENAGATAVAATAPPLSFLEKWLFEEGATGQ 266

Query: 208 VEEMMELPPVF 219
           VEEMMELPPVF
Sbjct: 267 VEEMMELPPVF 277

[Close]

BLAST of Carg03518 vs. NCBI nr
Match: XP_022983968.1 (myb-related protein 306-like [Cucurbita maxima])

HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 168/191 (87.96%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ AAVD PEPSESA    HSQCL   L
Sbjct: 87  NKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQSAAVDSPEPSESAASHFHSQCLPSQL 146

Query: 88  AGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE 147
           AGNRA+TYASSA+NISRLLQGWMRSSPEESR+ IGGENSGTA Q+Q KEELNGGELVSGE
Sbjct: 147 AGNRATTYASSAQNISRLLQGWMRSSPEESRQGIGGENSGTAVQQQLKEELNGGELVSGE 206

Query: 148 EFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQ 207
           EFDSILSFENWK VS CEDKEEHVGE+QRFEN GA AVAATAPPLSFLEKWLFEEGATGQ
Sbjct: 207 EFDSILSFENWKKVSSCEDKEEHVGEEQRFENVGATAVAATAPPLSFLEKWLFEEGATGQ 266

Query: 208 VEEMMELPPVF 219
           VEEMMELPPVF
Sbjct: 267 VEEMMELPPVF 277

[Close]

BLAST of Carg03518 vs. NCBI nr
Match: XP_022152039.1 (myb-related protein 306-like [Momordica charantia])

HSP 1 Score: 258.5 bits (659), Expect = 2.1e-65
Identity = 145/212 (68.40%), Postives = 160/212 (75.47%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLH--SQCLS- 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+LQ AAVDPPEPSES GG  H  ++C   
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQSAAVDPPEPSESGGGSCHLETKCFDD 146

Query: 88  ---------------PPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRI--GGENSG 147
                          P LAGNR +TYASSAENISRLLQGWMR+S  ESRR+I  GGENS 
Sbjct: 147 KRGAAAVAVGGSPEPPSLAGNRGATYASSAENISRLLQGWMRTSAVESRRKIGPGGENSA 206

Query: 148 T-AAQEQPKEELNGGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVA 207
             AA +QPK E +GGEL+SGEEFDSILSFEN KNV+      E+VGEKQR E+A   A  
Sbjct: 207 AGAATQQPKTEPDGGELISGEEFDSILSFENLKNVNSWGKSPENVGEKQRSESAA--AAT 266

Query: 208 ATAPPLSFLEKWLFEEGATGQVEEMMELPPVF 219
           A APPLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 AVAPPLSFLEKWLFEEGAAGQVEEMMELSPVF 296

[Close]

BLAST of Carg03518 vs. NCBI nr
Match: XP_023539024.1 (myb-related protein 306-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.6 bits (649), Expect = 3.0e-64
Identity = 140/200 (70.00%), Postives = 158/200 (79.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+LQ AAVD PEPSES   Q  ++  +  L
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQSAAVDLPEPSESGSCQFQTKSFNDKL 146

Query: 88  -AGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSG 147
            AGN+ STYASSAENISRLLQGWMRSSPEESRR+IGGENS   A++Q K E +GGELVS 
Sbjct: 147 AAGNKTSTYASSAENISRLLQGWMRSSPEESRRKIGGENSIATARQQLKVEADGGELVSD 206

Query: 148 EEFDSILSFENWKNV-------SFCEDKEEHVGEKQRFENAGAMAV-AATAPPLSFLEKW 207
           EEFDS+LSFEN KNV       + C+D+EE+VGEK R E A + AV      PLSFLEKW
Sbjct: 207 EEFDSMLSFENLKNVNSWGKSTTSCKDEEENVGEKLRSETAASTAVXXXXXXPLSFLEKW 266

Query: 208 LFEEGATGQVEEMMELPPVF 219
           LFEEGA GQVEEMMEL PVF
Sbjct: 267 LFEEGAAGQVEEMMELSPVF 286

[Close]

BLAST of Carg03518 vs. NCBI nr
Match: XP_008443185.1 (PREDICTED: myb-related protein 306-like [Cucumis melo] >ADN33980.1 MYB transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 147/208 (70.67%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQ-----C 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVDPPEP ESA  +  S       
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDPPEPPESAPSRFQSNDKVSAA 146

Query: 88  LSP-PLAGNR-ASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAA--QEQPKEEL 147
            SP  LAGNR A+TYASSAENISRLLQ WMRSSPEESRR+IGGENS   A  Q+QPK E 
Sbjct: 147 DSPSSLAGNRAATTYASSAENISRLLQAWMRSSPEESRRKIGGENSIAPATQQQQPKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +G ELVSGEEFDSILSFEN K+V        S+   +E +VGEKQR EN  A A  ATAP
Sbjct: 207 DGRELVSGEEFDSILSFENLKSVNSWGKSSLSYKGKEEVNVGEKQRSENDEATAANATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

[Close]

BLAST of Carg03518 vs. TAIR10
Match: AT1G08810.1 (myb domain protein 60)

HSP 1 Score: 94.7 bits (234), Expect = 7.3e-20
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WA+IASYLPQRTDN+IKNYWNTHLKKKL +      D  E S S    L +      +
Sbjct: 87  NKWASIASYLPQRTDNDIKNYWNTHLKKKLNK-----SDSDERSRSENIALQTSSTRNTI 146

Query: 88  AGNRASTYASSAENISRLLQGWMRSSPEES 118
             N  STYASS ENISRLL+GWMR+SP+ S
Sbjct: 147 --NHRSTYASSTENISRLLEGWMRASPKSS 169

[Close]

BLAST of Carg03518 vs. TAIR10
Match: AT3G47600.1 (myb domain protein 94)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 72/255 (28.24%), Postives = 102/255 (40.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAA-------------------VDPP 87
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++  +                        
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMNDSCDSTINNGLDNKDFSISNKNTTSH 146

Query: 88  EPSESAGGQ----------LHSQCLSPPLAGNR--------------------------- 147
           + S S+ GQ          +  Q L   L+ ++                           
Sbjct: 147 QSSNSSKGQWERRLQTDINMAKQALCDALSIDKPQNPTNFSIPDLGYGPXXXXXXXXXXX 206

Query: 148 ----------ASTYASSAENISRLLQGWMRSSPEES--RRRIGGENSGTAAQEQPKEELN 207
                     +  YASSAENI+RLLQ +M+ +P+ S        E + T A   P     
Sbjct: 207 XXXXXXXXYPSGVYASSAENIARLLQNFMKDTPKTSVPLPVAATEMAITTAASSPSTTEG 266

Query: 208 GGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWL 215
            GE +      S+ SF    ++   E+K + +           +    T   LS  EKWL
Sbjct: 267 DGEGID----HSLFSF---NSIDEAEEKPKLIDHD--------INGLITQGSLSLFEKWL 326

[Close]

BLAST of Carg03518 vs. TAIR10
Match: AT3G28910.1 (myb domain protein 30)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-12
Identity = 66/262 (25.19%), Postives = 98/262 (37.40%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPS---------------- 87
           +RWAAIASYLPQRTDN+IKNYWNTHLKKKL ++   +    + S                
Sbjct: 87  NRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVNQDSHQELDRSXXXXXXXXXXXXXXXX 146

Query: 88  --------------------------------------------------ESAGGQLHSQ 147
                                                              SA G L +Q
Sbjct: 147 XXXXXWERRLQTDIHLAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSASGFLRTQ 206

Query: 148 CLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGG 207
                     ++TYASS ENI++LL+GW+++SP+                       N  
Sbjct: 207 --------ETSTTYASSTENIAKLLKGWVKNSPKTQ---------------------NSA 266

Query: 208 ELVSGEEFDSILSFENWKNVSFCEDKEEHVGE-KQRFENAGAMAVAATAPPL-------- 213
           + ++  E   ++  ++ K    C    +   E    ++ AG      T P +        
Sbjct: 267 DQIASTEVKEVIKSDDGKE---CAGAFQSFSEFDHSYQQAGVSPDHETKPDITGCCSNQS 315

[Close]

BLAST of Carg03518 vs. TAIR10
Match: AT5G62470.2 (myb domain protein 96)

HSP 1 Score: 67.8 bits (164), Expect = 9.5e-12
Identity = 28/33 (84.85%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRL 61
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKI 119

[Close]

BLAST of Carg03518 vs. TAIR10
Match: AT1G74650.1 (myb domain protein 31)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKL 58
           +RWAAIASYLPQRTDN+IKNYWNTHLKKKL
Sbjct: 87  NRWAAIASYLPQRTDNDIKNYWNTHLKKKL 116

[Close]

BLAST of Carg03518 vs. Swiss-Prot
Match: sp|P81392|MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 78/228 (34.21%), Postives = 104/228 (45.61%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQP----------AAVDPPEPSESAGG- 87
           +RWAAIASYLP RTDN+IKNYWNTHLKKKL++LQ           ++VD  + S S G  
Sbjct: 87  NRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPENGKCQDGNSSVD-SDKSVSKGQW 146

Query: 88  --------QLHSQCLSPPLAGNR----------------------ASTYASSAENISRLL 147
                    +  Q L   L+ ++                      ASTY SSAENI+RLL
Sbjct: 147 ERRLQTDIHMAKQALCDALSLDKTSSSTDDPKLSTVQTTQPRPFQASTY-SSAENIARLL 206

Query: 148 QGWMRSSP--EESRRRIGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSFC 205
           + W + SP    S  + G   S T +   P   L+      G    + +SF N  N    
Sbjct: 207 ENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLSTSSPSEGAISTNFISF-NSSNSDIL 266

[Close]

BLAST of Carg03518 vs. Swiss-Prot
Match: sp|Q9SN78|MYB94_ARATH (Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.9e-11
Identity = 72/255 (28.24%), Postives = 102/255 (40.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAA-------------------VDPP 87
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++  +                        
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMNDSCDSTINNGLDNKDFSISNKNTTSH 146

Query: 88  EPSESAGGQ----------LHSQCLSPPLAGNR--------------------------- 147
           + S S+ GQ          +  Q L   L+ ++                           
Sbjct: 147 QSSNSSKGQWERRLQTDINMAKQALCDALSIDKPQNPTNFSIPDLGYGPXXXXXXXXXXX 206

Query: 148 ----------ASTYASSAENISRLLQGWMRSSPEES--RRRIGGENSGTAAQEQPKEELN 207
                     +  YASSAENI+RLLQ +M+ +P+ S        E + T A   P     
Sbjct: 207 XXXXXXXXYPSGVYASSAENIARLLQNFMKDTPKTSVPLPVAATEMAITTAASSPSTTEG 266

Query: 208 GGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWL 215
            GE +      S+ SF    ++   E+K + +           +    T   LS  EKWL
Sbjct: 267 DGEGID----HSLFSF---NSIDEAEEKPKLIDHD--------INGLITQGSLSLFEKWL 326

[Close]

BLAST of Carg03518 vs. Swiss-Prot
Match: sp|Q9SCU7|MYB30_ARATH (Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-11
Identity = 66/262 (25.19%), Postives = 98/262 (37.40%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPS---------------- 87
           +RWAAIASYLPQRTDN+IKNYWNTHLKKKL ++   +    + S                
Sbjct: 87  NRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVNQDSHQELDRSXXXXXXXXXXXXXXXX 146

Query: 88  --------------------------------------------------ESAGGQLHSQ 147
                                                              SA G L +Q
Sbjct: 147 XXXXXWERRLQTDIHLAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSASGFLRTQ 206

Query: 148 CLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGG 207
                     ++TYASS ENI++LL+GW+++SP+                       N  
Sbjct: 207 --------ETSTTYASSTENIAKLLKGWVKNSPKTQ---------------------NSA 266

Query: 208 ELVSGEEFDSILSFENWKNVSFCEDKEEHVGE-KQRFENAGAMAVAATAPPL-------- 213
           + ++  E   ++  ++ K    C    +   E    ++ AG      T P +        
Sbjct: 267 DQIASTEVKEVIKSDDGKE---CAGAFQSFSEFDHSYQQAGVSPDHETKPDITGCCSNQS 315

[Close]

BLAST of Carg03518 vs. Swiss-Prot
Match: sp|Q24JK1|MYB96_ARATH (Transcription factor MYB96 OS=Arabidopsis thaliana OX=3702 GN=MYB96 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 28/33 (84.85%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRL 61
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKI 119

[Close]

BLAST of Carg03518 vs. Swiss-Prot
Match: sp|Q9LXF1|MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDP 68
           +RW+AIA++LP+RTDN IKNYWNTHLKK+L ++    +DP
Sbjct: 87  NRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKM---GIDP 123

[Close]

BLAST of Carg03518 vs. TrEMBL
Match: tr|A0A1S3B7E9|A0A1S3B7E9_CUCME (myb-related protein 306-like OS=Cucumis melo OX=3656 GN=LOC103486845 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 147/208 (70.67%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQ-----C 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVDPPEP ESA  +  S       
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDPPEPPESAPSRFQSNDKVSAA 146

Query: 88  LSP-PLAGNR-ASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAA--QEQPKEEL 147
            SP  LAGNR A+TYASSAENISRLLQ WMRSSPEESRR+IGGENS   A  Q+QPK E 
Sbjct: 147 DSPSSLAGNRAATTYASSAENISRLLQAWMRSSPEESRRKIGGENSIAPATQQQQPKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +G ELVSGEEFDSILSFEN K+V        S+   +E +VGEKQR EN  A A  ATAP
Sbjct: 207 DGRELVSGEEFDSILSFENLKSVNSWGKSSLSYKGKEEVNVGEKQRSENDEATAANATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

[Close]

BLAST of Carg03518 vs. TrEMBL
Match: tr|E5GBY1|E5GBY1_CUCME (MYB transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 147/208 (70.67%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQ-----C 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVDPPEP ESA  +  S       
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDPPEPPESAPSRFQSNDKVSAA 146

Query: 88  LSP-PLAGNR-ASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAA--QEQPKEEL 147
            SP  LAGNR A+TYASSAENISRLLQ WMRSSPEESRR+IGGENS   A  Q+QPK E 
Sbjct: 147 DSPSSLAGNRAATTYASSAENISRLLQAWMRSSPEESRRKIGGENSIAPATQQQQPKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +G ELVSGEEFDSILSFEN K+V        S+   +E +VGEKQR EN  A A  ATAP
Sbjct: 207 DGRELVSGEEFDSILSFENLKSVNSWGKSSLSYKGKEEVNVGEKQRSENDEATAANATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

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BLAST of Carg03518 vs. TrEMBL
Match: tr|Q0ZPA2|Q0ZPA2_CUCSA (MYB transcription factor OS=Cucumis sativus OX=3659 GN=mybys PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.6e-53
Identity = 129/208 (62.02%), Postives = 140/208 (67.31%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSP-- 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVD PEP ESA  +  S    P  
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDTPEPPESATTRFQSNDKVPTA 146

Query: 88  ----PLAGNRASTYASSAENISRLLQGWMRSSPE---ESRRRIGGENSGTAAQEQPKEEL 147
                L  NRA+TYASSAENISRLLQ WMRSSPE                      K E 
Sbjct: 147 DSPSSLVSNRATTYASSAENISRLLQAWMRSSPEXXXXXXXXXXXXXXXXXXXXXXKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +GGELVSGEEFDSILSFEN K+V        S+   +E +VGEKQ  EN  A A  ATAP
Sbjct: 207 DGGELVSGEEFDSILSFENMKSVNSWGKSSLSYKGKEEVNVGEKQSSENDDATAENATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

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BLAST of Carg03518 vs. TrEMBL
Match: tr|A0A1Q3BPR5|A0A1Q3BPR5_CEPFO (Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13464 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34
Identity = 112/249 (44.98%), Postives = 138/249 (55.42%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQ---------- 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK++Q +A+DP    +S   Q          
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKIQ-SALDPHMTQDSTNSQYAANSRASSE 146

Query: 88  -----LHSQCLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRI--GGE------ 147
                  SQ  SP    N+ STYASS ENISRLL+GWMRSSP+ +   +  G +      
Sbjct: 147 RRSLEFTSQDSSP--RPNQPSTYASSTENISRLLEGWMRSSPKTNNNNLLKGSQEKLQQY 206

Query: 148 ---------NSGTAAQE----QPKEELNGGELVSGEEFDSILSFENWKNVSF-------- 207
                    N+  A       +PK E  GG+L+S EEF+SILSFEN  NV++        
Sbjct: 207 NSFDNNDSLNNSVATSSLHCYRPKGEQEGGDLISHEEFESILSFENLNNVAWDKSTSDST 266

Query: 208 -------CEDKEEHVG----EKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQVEE-- 219
                    D++ HV      KQR EN          PPLSFLEKWL +E +TGQVEE  
Sbjct: 267 TKGSRNSANDEKIHVAMTQERKQRSEN---------TPPLSFLEKWLLDE-STGQVEEMN 322

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BLAST of Carg03518 vs. TrEMBL
Match: tr|A0A0B0NRD8|A0A0B0NRD8_GOSAR (Myb-related protein OS=Gossypium arboreum OX=29729 GN=F383_16938 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.2e-34
Identity = 99/213 (46.48%), Postives = 122/213 (57.28%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDN++KNYWNTHLKKKLK+ QPA   P         Q+   CL+  L
Sbjct: 87  NKWAAIASYLPQRTDNDVKNYWNTHLKKKLKKFQPAMELP---------QMAQACLNKTL 146

Query: 88  AGNRAS---TYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELV 147
           A   +S   TYASS ENISRLLQGWMR+SP      I    S    Q Q K+E  GG+L+
Sbjct: 147 ATGSSSTIATYASSTENISRLLQGWMRASP-----NICSNQSAIILQTQSKDESGGGDLM 206

Query: 148 SGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAG---AMAVAATA------------ 207
           S E F+SIL FEN  NV++ +        K  F+++G     +V  T             
Sbjct: 207 SNEHFESILWFENMNNVAWEKSACGSTTSKGGFQDSGNDDQFSVEITQEMKQKTGNNSKF 266

Query: 208 -PPLSFLEKWLFEEGATGQVEEM---MELPPVF 219
            P  S LEKWL ++   GQVEEM   MEL P+F
Sbjct: 267 YPSFSSLEKWLLDDSCAGQVEEMNQSMELSPIF 285

The following BLAST results are available for this feature:

BLAST of Carg03518 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934282.1	1.6e-97	95.81	myb-related protein 306-like [Cucurbita moschata]	[more]
XP_022983968.1	1.8e-88	87.96	myb-related protein 306-like [Cucurbita maxima]	[more]
XP_022152039.1	2.1e-65	68.40	myb-related protein 306-like [Momordica charantia]	[more]
XP_023539024.1	3.0e-64	70.00	myb-related protein 306-like [Cucurbita pepo subsp. pepo]	[more]
XP_008443185.1	1.5e-63	70.67	PREDICTED: myb-related protein 306-like [Cucumis melo] >ADN33980.1 MYB transcrip...	[more]

BLAST of Carg03518 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08810.1	7.3e-20	57.78	myb domain protein 60	[more]
AT3G47600.1	3.3e-12	28.24	myb domain protein 94	[more]
AT3G28910.1	4.3e-12	25.19	myb domain protein 30	[more]
AT5G62470.2	9.5e-12	84.85	myb domain protein 96	[more]
AT1G74650.1	4.7e-11	93.33	myb domain protein 31	[more]

BLAST of Carg03518 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P81392\|MYB06_ANTMA	1.8e-15	34.21	Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1	[more]
sp\|Q9SN78\|MYB94_ARATH	5.9e-11	28.24	Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1	[more]
sp\|Q9SCU7\|MYB30_ARATH	7.7e-11	25.19	Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1	[more]
sp\|Q24JK1\|MYB96_ARATH	1.7e-10	84.85	Transcription factor MYB96 OS=Arabidopsis thaliana OX=3702 GN=MYB96 PE=2 SV=1	[more]
sp\|Q9LXF1\|MYB16_ARATH	4.7e-08	62.50	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]

BLAST of Carg03518 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7E9\|A0A1S3B7E9_CUCME	1.0e-63	70.67	myb-related protein 306-like OS=Cucumis melo OX=3656 GN=LOC103486845 PE=4 SV=1	[more]
tr\|E5GBY1\|E5GBY1_CUCME	1.0e-63	70.67	MYB transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|Q0ZPA2\|Q0ZPA2_CUCSA	4.6e-53	62.02	MYB transcription factor OS=Cucumis sativus OX=3659 GN=mybys PE=2 SV=1	[more]
tr\|A0A1Q3BPR5\|A0A1Q3BPR5_CEPFO	1.3e-34	44.98	Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=...	[more]
tr\|A0A0B0NRD8\|A0A0B0NRD8_GOSAR	2.2e-34	46.48	Myb-related protein OS=Gossypium arboreum OX=29729 GN=F383_16938 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03518-RA	Carg03518-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 23..53 e-value: 1.6E-7 score: 31.3
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 29..53 e-value: 5.89177E-5 score: 37.9402
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 18..72 e-value: 1.5E-13 score: 52.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..142
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 90..152 coord: 29..79
None	No IPR available	PANTHER	PTHR10641:SF726	MYB TRANSCRIPTION FACTOR	coord: 90..152 coord: 29..79
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 25..59

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03518	Cla017463	Watermelon (97103) v1	carwmB0237
Carg03518	ClCG10G016670	Watermelon (Charleston Gray)	carwcgB0240
Carg03518	CmaCh14G004730	Cucurbita maxima (Rimu)	carcmaB0343
Carg03518	CmaCh06G000560	Cucurbita maxima (Rimu)	carcmaB0349
Carg03518	CmoCh14G004790	Cucurbita moschata (Rifu)	carcmoB0347
Carg03518	CmoCh06G000480	Cucurbita moschata (Rifu)	carcmoB0350
Carg03518	Lsi03G016580	Bottle gourd (USVL1VR-Ls)	carlsiB225
Carg03518	CsGy3G034810	Cucumber (Gy14) v2	carcgybB0263
Carg03518	Cla97C10G199550	Watermelon (97103) v2	carwmbB0254
Carg03518	Bhi11G002278	Wax gourd	carwgoB0320

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03518	Carg01270	Silver-seed gourd	carcarB182

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03518	Wild cucumber (PI 183967)	carcpiB0280
Carg03518	Cucumber (Chinese Long) v2	carcuB0276
Carg03518	Cucumber (Chinese Long) v3	carcucB0279
Carg03518	Bottle gourd (USVL1VR-Ls)	carlsiB224
Carg03518	Melon (DHL92) v3.5.1	carmeB0251
Carg03518	Melon (DHL92) v3.6.1	carmedB0261
Carg03518	Silver-seed gourd	carcarB288
Carg03518	Cucumber (Gy14) v1	carcgyB0296
Carg03518	Cucurbita maxima (Rimu)	carcmaB0344
Carg03518	Cucurbita pepo (Zucchini)	carcpeB0352
Carg03518	Cucurbita pepo (Zucchini)	carcpeB0353
Carg03518	Cucurbita pepo (Zucchini)	carcpeB0355