Carg03518-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03518-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	myb-related protein 306-like
Location	Cucurbita_argyrosperma_scaffold_006 : 391090 .. 392040 (-)
Sequence length	657

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGGTATATGAAAGTCCCTTTTGTTTATAATCCTTTCCCATTTACTTGATCTTATTGTTCTTGAGATTTTTGTTGTTGTTCTTAGGATTGTTGCGATGCAGCAAAAGTTGCAGGCTCCGGTGGACCAATTATCTCCGGCCGGGAATAAACAGAGGAAATTTCACTCCCCATGAGGAAGGAATGATCATTCATCTTCAAGCTTTATTGGGTAACAAGTAATGATCTTCTTATTGTTCTTTCTTCTTTTGATTTGCAGTTTCAATCATTTAATTGAAATCTGGGCTTTGAAATTCTCAGATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTACAGCCCGCCGCCGTTGATCCGCCGGAGCCGTCCGAGTCCGCCGGCGGTCAGTTACACTCCCAATGCTTGTCGCCGCCGCTCGCTGGAAACAGAGCATCCACCTACGCGTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGCCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCAATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTTTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTATGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAA

mRNA sequence

ATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTACAGCCCGCCGCCGTTGATCCGCCGGAGCCGTCCGAGTCCGCCGGCGGTCAGTTACACTCCCAATGCTTGTCGCCGCCGCTCGCTGGAAACAGAGCATCCACCTACGCGTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGCCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCAATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTTTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTATGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAA

Coding sequence (CDS)

ATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTACAGCCCGCCGCCGTTGATCCGCCGGAGCCGTCCGAGTCCGCCGGCGGTCAGTTACACTCCCAATGCTTGTCGCCGCCGCTCGCTGGAAACAGAGCATCCACCTACGCGTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGCCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCAATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTTTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTATGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAA

Protein sequence

MDAGRRYHSGLLHPRTRPRQLALRSHQHRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF

Homology

[Close]

BLAST of Carg03518-RA vs. NCBI nr
Match: XP_022934282.1 (myb-related protein 306-like [Cucurbita moschata])

HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97
Identity = 183/191 (95.81%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ AAVDPPEPSESAGGQ  SQCLSPPL
Sbjct: 87  NKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQSAAVDPPEPSESAGGQFQSQCLSPPL 146

Query: 88  AGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE 147
           A NRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE
Sbjct: 147 AENRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE 206

Query: 148 EFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQ 207
           EFDSILSFENWKNVS CEDKEEHVGEKQRFENAGA AVAATAPPLSFLEKWLFEEGATGQ
Sbjct: 207 EFDSILSFENWKNVSSCEDKEEHVGEKQRFENAGATAVAATAPPLSFLEKWLFEEGATGQ 266

Query: 208 VEEMMELPPVF 219
           VEEMMELPPVF
Sbjct: 267 VEEMMELPPVF 277

[Close]

BLAST of Carg03518-RA vs. NCBI nr
Match: XP_022983968.1 (myb-related protein 306-like [Cucurbita maxima])

HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 168/191 (87.96%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ AAVD PEPSESA    HSQCL   L
Sbjct: 87  NKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQSAAVDSPEPSESAASHFHSQCLPSQL 146

Query: 88  AGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGE 147
           AGNRA+TYASSA+NISRLLQGWMRSSPEESR+ IGGENSGTA Q+Q KEELNGGELVSGE
Sbjct: 147 AGNRATTYASSAQNISRLLQGWMRSSPEESRQGIGGENSGTAVQQQLKEELNGGELVSGE 206

Query: 148 EFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQ 207
           EFDSILSFENWK VS CEDKEEHVGE+QRFEN GA AVAATAPPLSFLEKWLFEEGATGQ
Sbjct: 207 EFDSILSFENWKKVSSCEDKEEHVGEEQRFENVGATAVAATAPPLSFLEKWLFEEGATGQ 266

Query: 208 VEEMMELPPVF 219
           VEEMMELPPVF
Sbjct: 267 VEEMMELPPVF 277

[Close]

BLAST of Carg03518-RA vs. NCBI nr
Match: XP_022152039.1 (myb-related protein 306-like [Momordica charantia])

HSP 1 Score: 258.5 bits (659), Expect = 2.1e-65
Identity = 145/212 (68.40%), Postives = 160/212 (75.47%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLH--SQCLS- 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+LQ AAVDPPEPSES GG  H  ++C   
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQSAAVDPPEPSESGGGSCHLETKCFDD 146

Query: 88  ---------------PPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRI--GGENSG 147
                          P LAGNR +TYASSAENISRLLQGWMR+S  ESRR+I  GGENS 
Sbjct: 147 KRGAAAVAVGGSPEPPSLAGNRGATYASSAENISRLLQGWMRTSAVESRRKIGPGGENSA 206

Query: 148 T-AAQEQPKEELNGGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVA 207
             AA +QPK E +GGEL+SGEEFDSILSFEN KNV+      E+VGEKQR E+A   A  
Sbjct: 207 AGAATQQPKTEPDGGELISGEEFDSILSFENLKNVNSWGKSPENVGEKQRSESAA--AAT 266

Query: 208 ATAPPLSFLEKWLFEEGATGQVEEMMELPPVF 219
           A APPLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 AVAPPLSFLEKWLFEEGAAGQVEEMMELSPVF 296

[Close]

BLAST of Carg03518-RA vs. NCBI nr
Match: XP_023539024.1 (myb-related protein 306-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.6 bits (649), Expect = 3.0e-64
Identity = 140/200 (70.00%), Postives = 158/200 (79.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+LQ AAVD PEPSES   Q  ++  +  L
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQSAAVDLPEPSESGSCQFQTKSFNDKL 146

Query: 88  -AGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSG 147
            AGN+ STYASSAENISRLLQGWMRSSPEESRR+IGGENS   A++Q K E +GGELVS 
Sbjct: 147 AAGNKTSTYASSAENISRLLQGWMRSSPEESRRKIGGENSIATARQQLKVEADGGELVSD 206

Query: 148 EEFDSILSFENWKNV-------SFCEDKEEHVGEKQRFENAGAMAV-AATAPPLSFLEKW 207
           EEFDS+LSFEN KNV       + C+D+EE+VGEK R E A + AV      PLSFLEKW
Sbjct: 207 EEFDSMLSFENLKNVNSWGKSTTSCKDEEENVGEKLRSETAASTAVXXXXXXPLSFLEKW 266

Query: 208 LFEEGATGQVEEMMELPPVF 219
           LFEEGA GQVEEMMEL PVF
Sbjct: 267 LFEEGAAGQVEEMMELSPVF 286

[Close]

BLAST of Carg03518-RA vs. NCBI nr
Match: XP_008443185.1 (PREDICTED: myb-related protein 306-like [Cucumis melo] >ADN33980.1 MYB transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 147/208 (70.67%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQ-----C 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVDPPEP ESA  +  S       
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDPPEPPESAPSRFQSNDKVSAA 146

Query: 88  LSP-PLAGNR-ASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAA--QEQPKEEL 147
            SP  LAGNR A+TYASSAENISRLLQ WMRSSPEESRR+IGGENS   A  Q+QPK E 
Sbjct: 147 DSPSSLAGNRAATTYASSAENISRLLQAWMRSSPEESRRKIGGENSIAPATQQQQPKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +G ELVSGEEFDSILSFEN K+V        S+   +E +VGEKQR EN  A A  ATAP
Sbjct: 207 DGRELVSGEEFDSILSFENLKSVNSWGKSSLSYKGKEEVNVGEKQRSENDEATAANATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

[Close]

BLAST of Carg03518-RA vs. TAIR10
Match: AT1G08810.1 (myb domain protein 60)

HSP 1 Score: 94.7 bits (234), Expect = 7.3e-20
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WA+IASYLPQRTDN+IKNYWNTHLKKKL +      D  E S S    L +      +
Sbjct: 87  NKWASIASYLPQRTDNDIKNYWNTHLKKKLNK-----SDSDERSRSENIALQTSSTRNTI 146

Query: 88  AGNRASTYASSAENISRLLQGWMRSSPEES 118
             N  STYASS ENISRLL+GWMR+SP+ S
Sbjct: 147 --NHRSTYASSTENISRLLEGWMRASPKSS 169

[Close]

BLAST of Carg03518-RA vs. TAIR10
Match: AT3G47600.1 (myb domain protein 94)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 72/255 (28.24%), Postives = 102/255 (40.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAA-------------------VDPP 87
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++  +                        
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMNDSCDSTINNGLDNKDFSISNKNTTSH 146

Query: 88  EPSESAGGQ----------LHSQCLSPPLAGNR--------------------------- 147
           + S S+ GQ          +  Q L   L+ ++                           
Sbjct: 147 QSSNSSKGQWERRLQTDINMAKQALCDALSIDKPQNPTNFSIPDLGYGPXXXXXXXXXXX 206

Query: 148 ----------ASTYASSAENISRLLQGWMRSSPEES--RRRIGGENSGTAAQEQPKEELN 207
                     +  YASSAENI+RLLQ +M+ +P+ S        E + T A   P     
Sbjct: 207 XXXXXXXXYPSGVYASSAENIARLLQNFMKDTPKTSVPLPVAATEMAITTAASSPSTTEG 266

Query: 208 GGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWL 215
            GE +      S+ SF    ++   E+K + +           +    T   LS  EKWL
Sbjct: 267 DGEGID----HSLFSF---NSIDEAEEKPKLIDHD--------INGLITQGSLSLFEKWL 326

[Close]

BLAST of Carg03518-RA vs. TAIR10
Match: AT3G28910.1 (myb domain protein 30)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-12
Identity = 66/262 (25.19%), Postives = 98/262 (37.40%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPS---------------- 87
           +RWAAIASYLPQRTDN+IKNYWNTHLKKKL ++   +    + S                
Sbjct: 87  NRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVNQDSHQELDRSXXXXXXXXXXXXXXXX 146

Query: 88  --------------------------------------------------ESAGGQLHSQ 147
                                                              SA G L +Q
Sbjct: 147 XXXXXWERRLQTDIHLAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSASGFLRTQ 206

Query: 148 CLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGG 207
                     ++TYASS ENI++LL+GW+++SP+                       N  
Sbjct: 207 --------ETSTTYASSTENIAKLLKGWVKNSPKTQ---------------------NSA 266

Query: 208 ELVSGEEFDSILSFENWKNVSFCEDKEEHVGE-KQRFENAGAMAVAATAPPL-------- 213
           + ++  E   ++  ++ K    C    +   E    ++ AG      T P +        
Sbjct: 267 DQIASTEVKEVIKSDDGKE---CAGAFQSFSEFDHSYQQAGVSPDHETKPDITGCCSNQS 315

[Close]

BLAST of Carg03518-RA vs. TAIR10
Match: AT5G62470.2 (myb domain protein 96)

HSP 1 Score: 67.8 bits (164), Expect = 9.5e-12
Identity = 28/33 (84.85%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRL 61
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKI 119

[Close]

BLAST of Carg03518-RA vs. TAIR10
Match: AT1G74650.1 (myb domain protein 31)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKL 58
           +RWAAIASYLPQRTDN+IKNYWNTHLKKKL
Sbjct: 87  NRWAAIASYLPQRTDNDIKNYWNTHLKKKL 116

[Close]

BLAST of Carg03518-RA vs. Swiss-Prot
Match: sp|P81392|MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 78/228 (34.21%), Postives = 104/228 (45.61%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQP----------AAVDPPEPSESAGG- 87
           +RWAAIASYLP RTDN+IKNYWNTHLKKKL++LQ           ++VD  + S S G  
Sbjct: 87  NRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPENGKCQDGNSSVD-SDKSVSKGQW 146

Query: 88  --------QLHSQCLSPPLAGNR----------------------ASTYASSAENISRLL 147
                    +  Q L   L+ ++                      ASTY SSAENI+RLL
Sbjct: 147 ERRLQTDIHMAKQALCDALSLDKTSSSTDDPKLSTVQTTQPRPFQASTY-SSAENIARLL 206

Query: 148 QGWMRSSP--EESRRRIGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSFC 205
           + W + SP    S  + G   S T +   P   L+      G    + +SF N  N    
Sbjct: 207 ENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLSTSSPSEGAISTNFISF-NSSNSDIL 266

[Close]

BLAST of Carg03518-RA vs. Swiss-Prot
Match: sp|Q9SN78|MYB94_ARATH (Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.9e-11
Identity = 72/255 (28.24%), Postives = 102/255 (40.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAA-------------------VDPP 87
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++  +                        
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMNDSCDSTINNGLDNKDFSISNKNTTSH 146

Query: 88  EPSESAGGQ----------LHSQCLSPPLAGNR--------------------------- 147
           + S S+ GQ          +  Q L   L+ ++                           
Sbjct: 147 QSSNSSKGQWERRLQTDINMAKQALCDALSIDKPQNPTNFSIPDLGYGPXXXXXXXXXXX 206

Query: 148 ----------ASTYASSAENISRLLQGWMRSSPEES--RRRIGGENSGTAAQEQPKEELN 207
                     +  YASSAENI+RLLQ +M+ +P+ S        E + T A   P     
Sbjct: 207 XXXXXXXXYPSGVYASSAENIARLLQNFMKDTPKTSVPLPVAATEMAITTAASSPSTTEG 266

Query: 208 GGELVSGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAGAMAVAATAPPLSFLEKWL 215
            GE +      S+ SF    ++   E+K + +           +    T   LS  EKWL
Sbjct: 267 DGEGID----HSLFSF---NSIDEAEEKPKLIDHD--------INGLITQGSLSLFEKWL 326

[Close]

BLAST of Carg03518-RA vs. Swiss-Prot
Match: sp|Q9SCU7|MYB30_ARATH (Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-11
Identity = 66/262 (25.19%), Postives = 98/262 (37.40%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPS---------------- 87
           +RWAAIASYLPQRTDN+IKNYWNTHLKKKL ++   +    + S                
Sbjct: 87  NRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVNQDSHQELDRSXXXXXXXXXXXXXXXX 146

Query: 88  --------------------------------------------------ESAGGQLHSQ 147
                                                              SA G L +Q
Sbjct: 147 XXXXXWERRLQTDIHLAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSASGFLRTQ 206

Query: 148 CLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGG 207
                     ++TYASS ENI++LL+GW+++SP+                       N  
Sbjct: 207 --------ETSTTYASSTENIAKLLKGWVKNSPKTQ---------------------NSA 266

Query: 208 ELVSGEEFDSILSFENWKNVSFCEDKEEHVGE-KQRFENAGAMAVAATAPPL-------- 213
           + ++  E   ++  ++ K    C    +   E    ++ AG      T P +        
Sbjct: 267 DQIASTEVKEVIKSDDGKE---CAGAFQSFSEFDHSYQQAGVSPDHETKPDITGCCSNQS 315

[Close]

BLAST of Carg03518-RA vs. Swiss-Prot
Match: sp|Q24JK1|MYB96_ARATH (Transcription factor MYB96 OS=Arabidopsis thaliana OX=3702 GN=MYB96 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 28/33 (84.85%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRL 61
           +RWAAIASYLP+RTDN+IKNYWNTHLKKKLK++
Sbjct: 87  NRWAAIASYLPERTDNDIKNYWNTHLKKKLKKI 119

[Close]

BLAST of Carg03518-RA vs. Swiss-Prot
Match: sp|Q9LXF1|MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDP 68
           +RW+AIA++LP+RTDN IKNYWNTHLKK+L ++    +DP
Sbjct: 87  NRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKM---GIDP 123

[Close]

BLAST of Carg03518-RA vs. TrEMBL
Match: tr|A0A1S3B7E9|A0A1S3B7E9_CUCME (myb-related protein 306-like OS=Cucumis melo OX=3656 GN=LOC103486845 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 147/208 (70.67%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQ-----C 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVDPPEP ESA  +  S       
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDPPEPPESAPSRFQSNDKVSAA 146

Query: 88  LSP-PLAGNR-ASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAA--QEQPKEEL 147
            SP  LAGNR A+TYASSAENISRLLQ WMRSSPEESRR+IGGENS   A  Q+QPK E 
Sbjct: 147 DSPSSLAGNRAATTYASSAENISRLLQAWMRSSPEESRRKIGGENSIAPATQQQQPKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +G ELVSGEEFDSILSFEN K+V        S+   +E +VGEKQR EN  A A  ATAP
Sbjct: 207 DGRELVSGEEFDSILSFENLKSVNSWGKSSLSYKGKEEVNVGEKQRSENDEATAANATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

[Close]

BLAST of Carg03518-RA vs. TrEMBL
Match: tr|E5GBY1|E5GBY1_CUCME (MYB transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 147/208 (70.67%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQ-----C 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVDPPEP ESA  +  S       
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDPPEPPESAPSRFQSNDKVSAA 146

Query: 88  LSP-PLAGNR-ASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAA--QEQPKEEL 147
            SP  LAGNR A+TYASSAENISRLLQ WMRSSPEESRR+IGGENS   A  Q+QPK E 
Sbjct: 147 DSPSSLAGNRAATTYASSAENISRLLQAWMRSSPEESRRKIGGENSIAPATQQQQPKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +G ELVSGEEFDSILSFEN K+V        S+   +E +VGEKQR EN  A A  ATAP
Sbjct: 207 DGRELVSGEEFDSILSFENLKSVNSWGKSSLSYKGKEEVNVGEKQRSENDEATAANATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

[Close]

BLAST of Carg03518-RA vs. TrEMBL
Match: tr|Q0ZPA2|Q0ZPA2_CUCSA (MYB transcription factor OS=Cucumis sativus OX=3659 GN=mybys PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.6e-53
Identity = 129/208 (62.02%), Postives = 140/208 (67.31%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSP-- 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK+L  AAVD PEP ESA  +  S    P  
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLNSAAVDTPEPPESATTRFQSNDKVPTA 146

Query: 88  ----PLAGNRASTYASSAENISRLLQGWMRSSPE---ESRRRIGGENSGTAAQEQPKEEL 147
                L  NRA+TYASSAENISRLLQ WMRSSPE                      K E 
Sbjct: 147 DSPSSLVSNRATTYASSAENISRLLQAWMRSSPEXXXXXXXXXXXXXXXXXXXXXXKAEP 206

Query: 148 NGGELVSGEEFDSILSFENWKNV--------SFCEDKEEHVGEKQRFENAGAMAVAATAP 207
           +GGELVSGEEFDSILSFEN K+V        S+   +E +VGEKQ  EN  A A  ATAP
Sbjct: 207 DGGELVSGEEFDSILSFENMKSVNSWGKSSLSYKGKEEVNVGEKQSSENDDATAENATAP 266

Query: 208 PLSFLEKWLFEEGATGQVEEMMELPPVF 219
           PLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 267 PLSFLEKWLFEEGAAGQVEEMMELSPVF 294

[Close]

BLAST of Carg03518-RA vs. TrEMBL
Match: tr|A0A1Q3BPR5|A0A1Q3BPR5_CEPFO (Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13464 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34
Identity = 112/249 (44.98%), Postives = 138/249 (55.42%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQ---------- 87
           ++WAAIASYLPQRTDN+IKNYWNTHLKKKLK++Q +A+DP    +S   Q          
Sbjct: 87  NKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKIQ-SALDPHMTQDSTNSQYAANSRASSE 146

Query: 88  -----LHSQCLSPPLAGNRASTYASSAENISRLLQGWMRSSPEESRRRI--GGE------ 147
                  SQ  SP    N+ STYASS ENISRLL+GWMRSSP+ +   +  G +      
Sbjct: 147 RRSLEFTSQDSSP--RPNQPSTYASSTENISRLLEGWMRSSPKTNNNNLLKGSQEKLQQY 206

Query: 148 ---------NSGTAAQE----QPKEELNGGELVSGEEFDSILSFENWKNVSF-------- 207
                    N+  A       +PK E  GG+L+S EEF+SILSFEN  NV++        
Sbjct: 207 NSFDNNDSLNNSVATSSLHCYRPKGEQEGGDLISHEEFESILSFENLNNVAWDKSTSDST 266

Query: 208 -------CEDKEEHVG----EKQRFENAGAMAVAATAPPLSFLEKWLFEEGATGQVEE-- 219
                    D++ HV      KQR EN          PPLSFLEKWL +E +TGQVEE  
Sbjct: 267 TKGSRNSANDEKIHVAMTQERKQRSEN---------TPPLSFLEKWLLDE-STGQVEEMN 322

[Close]

BLAST of Carg03518-RA vs. TrEMBL
Match: tr|A0A0B0NRD8|A0A0B0NRD8_GOSAR (Myb-related protein OS=Gossypium arboreum OX=29729 GN=F383_16938 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.2e-34
Identity = 99/213 (46.48%), Postives = 122/213 (57.28%), Query Frame = 0


Query: 28  HRWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQPAAVDPPEPSESAGGQLHSQCLSPPL 87
           ++WAAIASYLPQRTDN++KNYWNTHLKKKLK+ QPA   P         Q+   CL+  L
Sbjct: 87  NKWAAIASYLPQRTDNDVKNYWNTHLKKKLKKFQPAMELP---------QMAQACLNKTL 146

Query: 88  AGNRAS---TYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELV 147
           A   +S   TYASS ENISRLLQGWMR+SP      I    S    Q Q K+E  GG+L+
Sbjct: 147 ATGSSSTIATYASSTENISRLLQGWMRASP-----NICSNQSAIILQTQSKDESGGGDLM 206

Query: 148 SGEEFDSILSFENWKNVSFCEDKEEHVGEKQRFENAG---AMAVAATA------------ 207
           S E F+SIL FEN  NV++ +        K  F+++G     +V  T             
Sbjct: 207 SNEHFESILWFENMNNVAWEKSACGSTTSKGGFQDSGNDDQFSVEITQEMKQKTGNNSKF 266

Query: 208 -PPLSFLEKWLFEEGATGQVEEM---MELPPVF 219
            P  S LEKWL ++   GQVEEM   MEL P+F
Sbjct: 267 YPSFSSLEKWLLDDSCAGQVEEMNQSMELSPIF 285

The following BLAST results are available for this feature:

BLAST of Carg03518-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934282.1	1.6e-97	95.81	myb-related protein 306-like [Cucurbita moschata]	[more]
XP_022983968.1	1.8e-88	87.96	myb-related protein 306-like [Cucurbita maxima]	[more]
XP_022152039.1	2.1e-65	68.40	myb-related protein 306-like [Momordica charantia]	[more]
XP_023539024.1	3.0e-64	70.00	myb-related protein 306-like [Cucurbita pepo subsp. pepo]	[more]
XP_008443185.1	1.5e-63	70.67	PREDICTED: myb-related protein 306-like [Cucumis melo] >ADN33980.1 MYB transcrip...	[more]

BLAST of Carg03518-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08810.1	7.3e-20	57.78	myb domain protein 60	[more]
AT3G47600.1	3.3e-12	28.24	myb domain protein 94	[more]
AT3G28910.1	4.3e-12	25.19	myb domain protein 30	[more]
AT5G62470.2	9.5e-12	84.85	myb domain protein 96	[more]
AT1G74650.1	4.7e-11	93.33	myb domain protein 31	[more]

BLAST of Carg03518-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P81392\|MYB06_ANTMA	1.8e-15	34.21	Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1	[more]
sp\|Q9SN78\|MYB94_ARATH	5.9e-11	28.24	Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1	[more]
sp\|Q9SCU7\|MYB30_ARATH	7.7e-11	25.19	Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1	[more]
sp\|Q24JK1\|MYB96_ARATH	1.7e-10	84.85	Transcription factor MYB96 OS=Arabidopsis thaliana OX=3702 GN=MYB96 PE=2 SV=1	[more]
sp\|Q9LXF1\|MYB16_ARATH	4.7e-08	62.50	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]

BLAST of Carg03518-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7E9\|A0A1S3B7E9_CUCME	1.0e-63	70.67	myb-related protein 306-like OS=Cucumis melo OX=3656 GN=LOC103486845 PE=4 SV=1	[more]
tr\|E5GBY1\|E5GBY1_CUCME	1.0e-63	70.67	MYB transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|Q0ZPA2\|Q0ZPA2_CUCSA	4.6e-53	62.02	MYB transcription factor OS=Cucumis sativus OX=3659 GN=mybys PE=2 SV=1	[more]
tr\|A0A1Q3BPR5\|A0A1Q3BPR5_CEPFO	1.3e-34	44.98	Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=...	[more]
tr\|A0A0B0NRD8\|A0A0B0NRD8_GOSAR	2.2e-34	46.48	Myb-related protein OS=Gossypium arboreum OX=29729 GN=F383_16938 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg03518	Carg03518	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03518-RA.CDS.2	Carg03518-RA.CDS.2	CDS
Carg03518-RA.CDS.1	Carg03518-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03518-RA.exon.2	Carg03518-RA.exon.2	exon
Carg03518-RA.exon.1	Carg03518-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg03518-RA	Carg03518-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 23..53 e-value: 1.6E-7 score: 31.3
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 29..53 e-value: 5.89177E-5 score: 37.9402
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 18..72 e-value: 1.5E-13 score: 52.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..142
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 90..152 coord: 29..79
None	No IPR available	PANTHER	PTHR10641:SF726	MYB TRANSCRIPTION FACTOR	coord: 90..152 coord: 29..79
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 25..59