Carg03211 (gene) Silver-seed gourd

Overview
NameCarg03211
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNucleic acid-binding, OB-fold containing protein
LocationCucurbita_argyrosperma_scaffold_005 : 646794 .. 649469 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACGATAAGCCAATAACAACAATGTGCGCAGTGATAGCCATGGATCACACCAGTTTCTGCTACAGAGTTTGTTCAATCTGTGAGAGGACACTCCCTAGTAACCCTCCTTTTTCTCTATGCAAATTCTGCAACTTCAACGCTTTCAATCCCGGTTCCTCCTCCTCCAAGCGTGTCTTTCGTATACTTGTGAGTACCTCCGTGTTTTTACTTGAGAATTTATTTTTAGAATGTGTGGAAACTTCATACGATGTTCTTGTCGTTGGAATTCCACTTGTAATTTGAGTGGGAAATGCCATTGGGTTTGAGCTTGTGCATTGCATTGCATTCTTTATATTGTGGCTCTGATTAGGGTTCCTATATTTCCATTGTTTTTGGCAGATGTCAATTGCTACGGATAAGAAAGTACAAACTGTTATATGCTTTGATAGGGTTGCTAGGGTTCTGTTTGGTTGCTCTGCTGATGAGTTTTTCGACTTTGCTAAGCTACATCCCTTTGCTGGTAAATTCCCTTTGTATTTGTGAGTTACTTCTCATTGGTTTGCATGAGATTCTCTTTGAATGGACATAAACGATTTAGAACGAGACGCATTTCATTAAACAACCTAGAGGCAGAGTCCTTAATGATCATCAGAAGTTGTCTGAAGATTACGTTACAAATACAATTTGTGGGAAAATTTTCGATTGTTTTCCACAAAATCTGGCTTAATCTTCGTTCATCCAAGCTGTTCTGTTTTCTAGTGATCTGATTGCTGGTGGAATTTTCATTTCGTGATGCAGCTGAAGCTGTAAGTGAAATTCTGGAGGGAGAGATGTTTAGAATGACGATCTCTAAACCAAAGAATGGCAATGCACAACACTCGAGAGTTGTGCAACTTGTTCCTCTGAGTTCAGGTTTTCAACCAGCAATTCTGAGATTGAGGGAATTGTATGGGTAAGAGGCTGCTGTTAATTTTCCTCCCTTTGTCATTAGTTCTTCTTATTATGTGGGTTTCTACATGCTTTTCTTTTTCTTGAAGGACTACCTTCTCGGGTATGGGTGGATGTTTAGGCAGGCAGATATATAGCTCCATAATCATTTAGCTAAGTTTACTTGTTTTTTATTAGTATAATTATTTTGAGTGTCACGAAGGTTCATTATTCAAAGTGGATTTGTTGGGTGAAGAGTGCGTTATGACTCGTGGCCACCTACCTAGTGGGGGCATCTCCTCCGTTGTGGGTAAATGGGAAACCTGACTCTATGAACCCAAGGAAAGGCTGCACAGCAGTAGTCAGGGCGTTAAGACCGGAGCTTATTGTAGTGCTAGCAGTAATGCAAGTGAATGAATCTCATCTCCTATCGAGTTCTAGGGAGGGAGGGAAGGACGGGAGTGAAGGGAGTTGGTTCCTTGTGGGCAGAAATAAGATTTATTGAAGTGGTCTTGGGATTTCATATTTTAATGTGGAAACCATAATAACTTGATATAAAGTGGAAAGACTCTGAGATTCCACATCGGTTAGAGAGAGGAACAAAGTATTTTTTATAAAGGTGTAGAAACTTCTTCCTAGTAGACGCGTTTTAAGAACCTTGAAGGGACGCTCGAAAGGAAAAGCCCAAAAAGTAGTAGTGAGCTTGGGCTTGCAAATATTCCAGTCTCTTCTACATGTTTGATTGTAAACATCCAATGTCTTTGCTTCTTCCACAGAACAAGAGCTAGTATGACATGGTCTTCACCCGTTTGAGCTTCATGGAGCTGCACCATGGGCTTGTCATTTTAAGCATCCAAACAAGAAAAAGCATCTAACTCAAAGCTGTCCTAAACCAGTCCGAAAGGCCTTAAATTTTTTCTTTCCATCCAATCTCCATTCTCTCTGTCAGATGTTCTTACATAATTGAGCTAAATGCATGGGTGAAATTGTCCCTTCAGCTTCTTCTTGTTCTGACGTCTGAGACAGTTTAACTTCAAAACTTACTAGATATTCCTCGAGTACATACTCATGAAGCTGATGTTTTTTACGAGTTCTATAATCTATAAAAGTTCGGTTGTAATTACAAAAGTTACTTGAAAGAGAATTGAAATTTCACCTGTCCGTTGGATTTTTTGTCTTGTTTTTGGCTGGCCAAGTTATGATTGCCTAGTGGCTCTATATATTTTTAGTGAATTGACTGCTTAATTTTGCTTGCAGGCTAACAAAGGTATCATCTGCTGTTGGTAATGGACAAAACATGCATAGCTCCAAGAAGCAAAAGAGATGTGATGTGGGCACCTCAAAAACTACCTAATCCTATCCCTTTCTTCAACTGTTTGTATTTTTGCTATCATTTAGACTTTGTTATTTGATATGACTTTTTTGTGCAGTGGAGAGGATTTTAACTAGAAAGGAAGAATGAAGTAGATTCTATTTCTTTCCTTTGGGACATGACACATGACAAGATAGCTTTCTTGGGAATGGAACAGTTGGATCGTTGTTCAATAGTAGCCGGGATAAGCAGGCATAAACTTCTGTATAGCGCCCTATAAATACGACTTGCCTTGCAACATACCTGCTGAACAAGGCTATAAAAGGCAACTCCTGTAAGTATATATCAATCACCACTAAGTTATACTCATGTTTGATGCAAGTTTAGGTTCGAAACTCTAGCATTATGAGAAGAAAGCGGTGTTCGAGTTATAGTTTTGATGGATGCATATC

mRNA sequence

ATGGAAAACGATAAGCCAATAACAACAATGTGCGCAGTGATAGCCATGGATCACACCAGTTTCTGCTACAGAGTTTGTTCAATCTGTGAGAGGACACTCCCTAGTAACCCTCCTTTTTCTCTATGCAAATTCTGCAACTTCAACGCTTTCAATCCCGGTTCCTCCTCCTCCAAGCGTGTCTTTCGTATACTTATGTCAATTGCTACGGATAAGAAAGTACAAACTGTTATATGCTTTGATAGGGTTGCTAGGGTTCTGTTTGGTTGCTCTGCTGATGAGTTTTTCGACTTTGCTAAGCTACATCCCTTTGCTGCTGAAGCTGTAAGTGAAATTCTGGAGGGAGAGATGTTTAGAATGACGATCTCTAAACCAAAGAATGGCAATGCACAACACTCGAGAGTTGTGCAACTTGTTCCTCTGAGTTCAGGTTTTCAACCAGCAATTCTGAGATTGAGGGAATTGTATGGGCTAACAAAGGTATCATCTGCTGTTGGTAATGGACAAAACATGCATAGCTCCAAGAAGCAAAAGAGATGTGATGTGGGCACCTCAAAAACTACCTAATCCTATCCCTTTCTTCAACTGTTTGTATTTTTGCTATCATTTAGACTTTGTTATTTGATATGACTTTTTTGTGCAGTGGAGAGGATTTTAACTAGAAAGGAAGAATGAAGTAGATTCTATTTCTTTCCTTTGGGACATGACACATGACAAGATAGCTTTCTTGGGAATGGAACAGTTGGATCGTTGTTCAATAGTAGCCGGGATAAGCAGGCATAAACTTCTGTATAGCGCCCTATAAATACGACTTGCCTTGCAACATACCTGCTGAACAAGGCTATAAAAGGCAACTCCTGTAAGTATATATCAATCACCACTAAGTTATACTCATGTTTGATGCAAGTTTAGGTTCGAAACTCTAGCATTATGAGAAGAAAGCGGTGTTCGAGTTATAGTTTTGATGGATGCATATC

Coding sequence (CDS)

ATGGAAAACGATAAGCCAATAACAACAATGTGCGCAGTGATAGCCATGGATCACACCAGTTTCTGCTACAGAGTTTGTTCAATCTGTGAGAGGACACTCCCTAGTAACCCTCCTTTTTCTCTATGCAAATTCTGCAACTTCAACGCTTTCAATCCCGGTTCCTCCTCCTCCAAGCGTGTCTTTCGTATACTTATGTCAATTGCTACGGATAAGAAAGTACAAACTGTTATATGCTTTGATAGGGTTGCTAGGGTTCTGTTTGGTTGCTCTGCTGATGAGTTTTTCGACTTTGCTAAGCTACATCCCTTTGCTGCTGAAGCTGTAAGTGAAATTCTGGAGGGAGAGATGTTTAGAATGACGATCTCTAAACCAAAGAATGGCAATGCACAACACTCGAGAGTTGTGCAACTTGTTCCTCTGAGTTCAGGTTTTCAACCAGCAATTCTGAGATTGAGGGAATTGTATGGGCTAACAAAGGTATCATCTGCTGTTGGTAATGGACAAAACATGCATAGCTCCAAGAAGCAAAAGAGATGTGATGTGGGCACCTCAAAAACTACCTAA

Protein sequence

MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRVFRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMTISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCDVGTSKTT
Homology
[Close]
BLAST of Carg03211 vs. NCBI nr
Match: XP_022943427.1 (uncharacterized protein LOC111448196 isoform X1 [Cucurbita moschata] >XP_022943428.1 uncharacterized protein LOC111448196 isoform X1 [Cucurbita moschata])

HSP 1 Score: 378.3 bits (970), Expect = 1.6e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCD 180
           ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCD
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCD 180

Query: 181 VGTSKTT 188
           VGTSKTT
Sbjct: 181 VGTSKTT 187

[Close]
BLAST of Carg03211 vs. NCBI nr
Match: XP_023512879.1 (uncharacterized protein LOC111777484 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.0 bits (959), Expect = 2.9e-100
Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNP SSSSKRV
Sbjct: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPCSSSSKRV 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT
Sbjct: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCD 180
           ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCD
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCD 180

Query: 181 VGTSKTT 188
           VGTSKTT
Sbjct: 181 VGTSKTT 187

[Close]
BLAST of Carg03211 vs. NCBI nr
Match: XP_022985581.1 (uncharacterized protein LOC111483608 isoform X3 [Cucurbita maxima])

HSP 1 Score: 372.9 bits (956), Expect = 6.6e-100
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           MENDK ITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKRITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSKKQKRCD 180
           ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL KVSSAVGNGQNMHSSKKQKRCD
Sbjct: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLAKVSSAVGNGQNMHSSKKQKRCD 180

Query: 181 VGTSKTT 188
           VGTSKTT
Sbjct: 181 VGTSKTT 187

[Close]
BLAST of Carg03211 vs. NCBI nr
Match: XP_023512876.1 (uncharacterized protein LOC111777484 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512877.1 uncharacterized protein LOC111777484 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 2.8e-98
Identity = 185/193 (95.85%), Postives = 186/193 (96.37%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNP SSSSKRV
Sbjct: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPCSSSSKRV 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPF------AAEAVSEILEG 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPF      AAEAVSEILEG
Sbjct: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAVSFRDAAEAVSEILEG 120

Query: 121 EMFRMTISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSK 180
           EMFRMTISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSK
Sbjct: 121 EMFRMTISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSK 180

Query: 181 KQKRCDVGTSKTT 188
           KQKRCDVGTSKTT
Sbjct: 181 KQKRCDVGTSKTT 193

[Close]
BLAST of Carg03211 vs. NCBI nr
Match: XP_022985578.1 (uncharacterized protein LOC111483608 isoform X1 [Cucurbita maxima] >XP_022985579.1 uncharacterized protein LOC111483608 isoform X1 [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 6.1e-98
Identity = 185/193 (95.85%), Postives = 185/193 (95.85%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           MENDK ITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENDKRITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPF------AAEAVSEILEG 120
           FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPF      AAEAVSEILEG
Sbjct: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAVSFRDAAEAVSEILEG 120

Query: 121 EMFRMTISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSSK 180
           EMFRMTISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL KVSSAVGNGQNMHSSK
Sbjct: 121 EMFRMTISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLAKVSSAVGNGQNMHSSK 180

Query: 181 KQKRCDVGTSKTT 188
           KQKRCDVGTSKTT
Sbjct: 181 KQKRCDVGTSKTT 193

[Close]
BLAST of Carg03211 vs. TAIR10
Match: AT2G28105.1 (Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955))

HSP 1 Score: 171.0 bits (432), Expect = 6.9e-43
Identity = 90/170 (52.94%), Postives = 114/170 (67.06%), Query Frame = 0 

Query: 8   TTMCAVIAMDHTSFCYRVCSICERTLPSN----PPFSLCKFCNFNAFNPGSSSSKRVFRI 67
           T +C ++A+D T +CYRVCS C+R LPS+       S CKFC        S   K ++RI
Sbjct: 6   TVLCTLLAVDLTDYCYRVCSRCQRVLPSDNNGFASSSFCKFCK-------SKEPKLLYRI 65

Query: 68  LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMTISK 127
           LMSIATD  V+TVICFDR A VLFGCSADEFF F KL+P AA  V+++ +GEM RMT+++
Sbjct: 66  LMSIATDASVKTVICFDRAATVLFGCSADEFFHFTKLNPLAASMVNQVFDGEMLRMTLTR 125

Query: 128 PKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGLTKVSSAVGNGQNMHSS 174
           P+N NAQH RV  +VPL SG QPAI+ LR++   TK +S        HSS
Sbjct: 126 PQNRNAQHMRVASVVPLRSGVQPAIVTLRQI--CTKNASLGNFSTTNHSS 166

[Close]
BLAST of Carg03211 vs. TrEMBL
Match: tr|A0A1S3CNQ4|A0A1S3CNQ4_CUCME (uncharacterized protein LOC103503028 OS=Cucumis melo OX=3656 GN=LOC103503028 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.2e-75
Identity = 141/157 (89.81%), Postives = 150/157 (95.54%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           MEN KPITTMCAVIAMD+T+FCYRVCSICERTLP NP  SLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENGKPITTMCAVIAMDYTNFCYRVCSICERTLPVNPSSSLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FR+LMSIATDK+VQTVICFDRVA+VLFGCSADEFFDFAKLHPFAAE VSEIL GEMFR+T
Sbjct: 61  FRLLMSIATDKEVQTVICFDRVAKVLFGCSADEFFDFAKLHPFAAETVSEILVGEMFRIT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL 158
           ISKPKNGNAQHSRVVQ+VPLSS FQPAI+RLRELYG+
Sbjct: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGV 157

[Close]
BLAST of Carg03211 vs. TrEMBL
Match: tr|A0A0A0KEN7|A0A0A0KEN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147650 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-74
Identity = 142/156 (91.03%), Postives = 149/156 (95.51%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           MEN KPITTMCAV+AMD+T+FCYRVCSICERTLP NP  SLCKFCNFNAFNPGSSSSKRV
Sbjct: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPS-SLCKFCNFNAFNPGSSSSKRV 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FR+LMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAE VSEILEGEM R+T
Sbjct: 61  FRLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRIT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYG 157
           ISKPKNGNAQHSRVVQ+VPLSS FQPAI+RLRELYG
Sbjct: 121 ISKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYG 155

[Close]
BLAST of Carg03211 vs. TrEMBL
Match: tr|A0A2P4M0F6|A0A2P4M0F6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_33197 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.8e-62
Identity = 115/156 (73.72%), Postives = 135/156 (86.54%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           ME +KP T +C V+A+DHT+ CYRVC++CERTLP N P SLCKFCNFNAFN  S +SKR+
Sbjct: 1   MEGEKPTTLVCTVLAIDHTNLCYRVCAVCERTLPHNDPTSLCKFCNFNAFNSVSPASKRL 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FR+LMSIA+D KV TVICFDR+A+V+FGCSADEFFDFAKLHPFAA + S ILEGEMF+MT
Sbjct: 61  FRVLMSIASDTKVFTVICFDRMAKVIFGCSADEFFDFAKLHPFAAVSASRILEGEMFKMT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYG 157
           +SKPKNGNAQH RVV +VPL +GFQPAI  LR+LYG
Sbjct: 121 LSKPKNGNAQHLRVVSVVPLRTGFQPAIETLRKLYG 156

[Close]
BLAST of Carg03211 vs. TrEMBL
Match: tr|A0A2P4M0V6|A0A2P4M0V6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_33200 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 6.1e-62
Identity = 115/156 (73.72%), Postives = 135/156 (86.54%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           ME +KP T +C V+A+DHT+ CYRVC++CERTLP N P SLCK CNFNAFN  SS+SKR+
Sbjct: 1   MEGEKPTTLVCTVLAIDHTNLCYRVCAVCERTLPHNDPTSLCKSCNFNAFNSVSSASKRL 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FR+LMSIA+D KV TVICFDR+A+V+FGCSADEFFDFAKLHPFAA + S ILEGEMF+MT
Sbjct: 61  FRVLMSIASDTKVFTVICFDRMAKVIFGCSADEFFDFAKLHPFAAVSASRILEGEMFKMT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYG 157
           +SKPKNGNAQH RVV +VPL +GFQPAI  LR+LYG
Sbjct: 121 LSKPKNGNAQHLRVVSVVPLRTGFQPAIETLRKLYG 156

[Close]
BLAST of Carg03211 vs. TrEMBL
Match: tr|M5W0J2|M5W0J2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G109500 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.0e-61
Identity = 117/157 (74.52%), Postives = 133/157 (84.71%), Query Frame = 0 

Query: 1   MENDKPITTMCAVIAMDHTSFCYRVCSICERTLPSNPPFSLCKFCNFNAFNPGSSSSKRV 60
           ME +KP T +C V+A+DHT F YRVCS+CERTLP NP  SLCKFC+ NAFNP  S SKR+
Sbjct: 1   MEAEKPTTMLCTVLAIDHTDFSYRVCSVCERTLPDNPT-SLCKFCSVNAFNPRFSRSKRL 60

Query: 61  FRILMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAEAVSEILEGEMFRMT 120
           FR+LMSIA+D KV TVICFDR A+VLFGCSADEFFDFAK HPFAA  VS ILEGEMF+MT
Sbjct: 61  FRLLMSIASDTKVFTVICFDRAAKVLFGCSADEFFDFAKFHPFAAVNVSRILEGEMFKMT 120

Query: 121 ISKPKNGNAQHSRVVQLVPLSSGFQPAILRLRELYGL 158
           +SKPKNGNAQH R VQ++PL SGFQPAI+ LRELYG+
Sbjct: 121 LSKPKNGNAQHLRAVQVIPLRSGFQPAIVTLRELYGV 156

The following BLAST results are available for this feature:
BLAST of Carg03211 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943427.11.6e-101100.00uncharacterized protein LOC111448196 isoform X1 [Cucurbita moschata] >XP_0229434... [more]
XP_023512879.12.9e-10098.93uncharacterized protein LOC111777484 isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_022985581.16.6e-10098.93uncharacterized protein LOC111483608 isoform X3 [Cucurbita maxima][more]
XP_023512876.12.8e-9895.85uncharacterized protein LOC111777484 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022985578.16.1e-9895.85uncharacterized protein LOC111483608 isoform X1 [Cucurbita maxima] >XP_022985579... [more]
BLAST of Carg03211 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28105.16.9e-4352.94Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C... [more]
BLAST of Carg03211 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg03211 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CNQ4|A0A1S3CNQ4_CUCME2.2e-7589.81uncharacterized protein LOC103503028 OS=Cucumis melo OX=3656 GN=LOC103503028 PE=... [more]
tr|A0A0A0KEN7|A0A0A0KEN7_CUCSA1.1e-7491.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147650 PE=4 SV=1[more]
tr|A0A2P4M0F6|A0A2P4M0F6_QUESU2.8e-6273.72Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_33197 PE=4 SV=1[more]
tr|A0A2P4M0V6|A0A2P4M0V6_QUESU6.1e-6273.72Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_33200 PE=4 SV=1[more]
tr|M5W0J2|M5W0J2_PRUPE3.0e-6174.52Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G109500 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03211-RACarg03211-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 1..139
e-value: 1.5E-6
score: 29.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..187
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 3..102
NoneNo IPR availablePANTHERPTHR23273:SF30SUBFAMILY NOT NAMEDcoord: 3..102
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 4..120

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03211Cla008707Watermelon (97103) v1carwmB0330
Carg03211Csa6G147650Cucumber (Chinese Long) v2carcuB0371
Carg03211MELO3C026944Melon (DHL92) v3.5.1carmeB0340
Carg03211ClCG02G021490Watermelon (Charleston Gray)carwcgB0327
Carg03211CSPI06G11830Wild cucumber (PI 183967)carcpiB0374
Carg03211Cucsa.385780Cucumber (Gy14) v1carcgyB0403
Carg03211CmaCh20G005150Cucurbita maxima (Rimu)carcmaB0473
Carg03211CmoCh20G005480Cucurbita moschata (Rifu)carcmoB0464
Carg03211Lsi10G012310Bottle gourd (USVL1VR-Ls)carlsiB303
Carg03211Cp4.1LG16g05040Cucurbita pepo (Zucchini)carcpeB0465
Carg03211CsGy6G011940Cucumber (Gy14) v2carcgybB0351
Carg03211MELO3C026944.2Melon (DHL92) v3.6.1carmedB0346
Carg03211CsaV3_6G014270Cucumber (Chinese Long) v3carcucB0375
Carg03211Cla97C02G047580Watermelon (97103) v2carwmbB0346
Carg03211Bhi10G000111Wax gourdcarwgoB0421
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg03211Silver-seed gourdcarcarB187
Carg03211Silver-seed gourdcarcarB287
Carg03211Silver-seed gourdcarcarB366
Carg03211Cucumber (Gy14) v2carcgybB0342
Carg03211Cucurbita maxima (Rimu)carcmaB0467
Carg03211Cucurbita maxima (Rimu)carcmaB0474
Carg03211Cucurbita maxima (Rimu)carcmaB0482
Carg03211Cucurbita moschata (Rifu)carcmoB0458
Carg03211Cucurbita moschata (Rifu)carcmoB0460
Carg03211Cucurbita moschata (Rifu)carcmoB0465
Carg03211Cucurbita moschata (Rifu)carcmoB0469
Carg03211Cucurbita pepo (Zucchini)carcpeB0470
Carg03211Cucurbita pepo (Zucchini)carcpeB0480
Carg03211Cucumber (Chinese Long) v2carcuB0360
Carg03211Cucumber (Chinese Long) v3carcucB0363
Carg03211Watermelon (97103) v2carwmbB0340
Carg03211Watermelon (97103) v2carwmbB0353
Carg03211Wax gourdcarwgoB0415
Carg03211Wax gourdcarwgoB0423
Carg03211Wax gourdcarwgoB0427