Carg02833 (gene) Silver-seed gourd

Overview
NameCarg02833
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein, chloroplastic
LocationCucurbita_argyrosperma_scaffold_008 : 284844 .. 288158 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAGCACTTGTTGCAATGGTGCTTTTAGTAATTGTCAGATATACGCTTCTAGTTGTAGTGGATCATCGAGAGGATTGATATCGGAAAATCTGGGGGATTTTCGAACTGCGACTTTGTCTATGGCGAATTGGAAGAAGCACAGGAAGAAGCGGAAGAATGTTTGCCGGTTTGCGTTGCAAGATCCGGAGCAAGCGACGGTGGCGGTAAAAGAGAAGATGAAAATTCCAGTGTCCGAAGAGGAAATTCTTCAGGCTTTGAAATCGATGACGGATACTACGCGTGCTCTTTCTTATTTTTACTCGGTACCTGATTTTCCTTGTGTTCAGCATACCACTGAGACGTGCAATTTCATGCTTGAATTCTTAAGAGTTCATGAGAAGGTGGAGGATATGGCTACTGTTTTTGAATTTATGCAGAAGAAAATTATTAGGAGGGATTTGAGCACTTATTTGACTATCTTTAAAGCTCTTTCCATCAGGGGTGGCCTTCGGCAGGTGACGATTGCGCTAAAGAAGATGAGAAAAGCTGGATTTGTCTTGAATGCATATTCATACAACGGATTGATCCATTTGTTGATTCAATCAGGATTCTGTAGTGAGGCCTTGGAAGTTTATAGAAGAATGGTTTCAGAAGGGCTTAAGCCGAGCCTGAAGACGTATTCGGCACTTATGGTTGCGTTGGGAAAGAAGAGGGACTCGGAAACGGTAATGGTTCTGTTGAAAGAGATGGAAAGTTTGGGATTGAGACCAAATGTTTACACTTATACAATATGCATCAGAGTGCTAGGGAGGGCTGGGAAAATCGACGAGGCGTATGAGATATTTAGGAGAATGGACGAGGAAGGTTGTGGACCCGACCTTGTTACGTATACAGTCCTCATCGACGCTCTTTGTAATGCAGGACGGTTGGAAAGTGCCAAGGAGTTGTTTGTGAAGATGAAAGCTAATGGTCACAAACCTGATCAAGTAATCTACATTACTTTGTTAGATAAGTTCAATGATTTTGGAGATCTGGACACTGTCAAAGAATTTTGGAGTCAGATGGAAGCTGATGGATATATGCCCGATGTCGTTACCTTCACTATTCTCGTTGACACCTTATGCAAAGCCAGAGACTTCGATGAGGCGTTCGCTACCTTTGATGTCATGAGAAAGCAAGGCATCTTGCCAAATCTTCATACTTATAACACACTTATTTGTGGACTTCTGAAGGCAGGTAGAATTGAGGATGCACTAAAGCTTTTAGATACCATGGAATCCTTAGGTGTTCAGCCGACTGCTTATACGTACGTTATTTTTATCGACTATTTCGGAAAGTCCGGAGATACTGGCAAAGCTGTTGAGACCTTTGAGAAGATGAAAGCTAGAGGAATCGTTCCAAATATCGTAGCGTGCAATGCATCGTTGTATAGCCTTGCTGAAACGGGGAGGTTGAGAGAAGCAAAAAACATGTTCAATGGGCTAAGAGAGAATGGTCTTGCTCCAGATTCAGTGACCTATAACATGATGATGAAGTGCTACAGCAAAGTAGGACAAGTAGACGACGCCGTGAATTTACTTTTCGAGATGATAAAAAATGGATGTGAACCTGATGTGATTGTGGTTAACTCTTTGATCGATTCGCTTTACAAGGCGGGACGAGTTGATGAAGCATGGAAAATGTTCGACAGAATGAAGGACATGAAGCTTTCTCCAACAGTTGTGACGTTTAATACGTTACTCTCTGGATTAGGGAAAGAGGGTCGAGTCCAGAAAGCCATTGAATTATTCGAAAGTATGATTAAGCAAAGGTGTTCTCCGAACACGATATCGTTTAACACGCTCCTGGATTGCTTTTGCAAAAACGACGAGATTGAATTGGCTTTGGAAATGTTTTCTAAAATGACAGAAATGGACTGTAAACCTGATGTCTTGACTTACAACACTGTTATTTATGGGCTGATCAAAGAAAACAGAGTAAATTATGCATTCTGGTTCTTCCACCAGTTGAAGAAATCGATGTACCCCGATCATGTCACAATATGTACCCTCCTTCCCGGTATCGTGAAGAGCGGGCGGATAGGGGATGCTATAAAGATTGCAAAGGATTTCATCAACCAGGTCCAGTTTCGTGTAAATAGATCCTTTTGGGAAGATTTAATGGGAGGAACTTTGGTTGAAGCTGAGATAGACAAGGCTGTTATATTTGCTGAAGAATTGGTACTGAATGGGATTTGCAGGGAAGACTCATTCTTGATACCTCTAATTAGAGTTTTGTGTAAGCAAAAGAGAGCACTTTATGCTTATCAAATATTTGAGAACTTCACGACGAATCTCGAAATCAAACCGACAGTGGCATCATATAATTGTTTGATAGGTGAGCTTCTTGAAGTTCATTACACCGAAAAGGCCTGGGATCTGTTTCAGGATATGAAGAACGCCGCCTGTGCTCCTGATACTTTTACCTACAACATGTTGCTCGATGTTCATGGAAAGTCGGGGAAGATCGCCGAACTTTTTGAACTGTACAATGAGATGGTTTCGAGGAAATGCAAGCCAAACGTCATAACTTACAACATCGTCATCTCCAGCCTTGCAAAATCTAATAACTTGGATAAAGCTTTAGATTTTTACTATGATCTTGTTAGTAGTGATTTCTGCCCCACTCCTTGTACGTACGGCCCTCTGCTCGACGGACTAGCAAAAGCGGGGCGCTTAGAGGAAGCGATGCAGCTCTTCGAAGAGATGCCAGACTATGGATGCAAGCCAAACTGTGCAATATTCAACATTCTGATAAATGGATATGGGAAAACAGGTGACATAGAAATCGCTCATCAGTTGTTTAAAAGGATGGTGAAGGAGGGTATAAGGCCAGACTTGAAGTCATACACCATTTTGGTAGAATGCCTTTGCCTTGCTGGAAAAGTAGATGAAGCCTTATACTATTTCGAGGAGCTGAAATCAACCGGTCTTGATCCCGACTTTATCGCTTATAATCGTATAATAAACGGTCTAGGAAAATCGCAGAGGATGGAGGAAGCGCTCGCTTTATACAGCGAAATGCGAGAGAGAGGCATTGTTCCTGACCTGCACACATATAATGCAATGTTGCTTTATCTTGGGCTTGCTGGAATGGTGGAAGAAGCCGAGAGAATGTATGAAGAGCTTCAACTTGCAGGGCTAGAACCAGATGTCTTTACTTATAACGCTCTCATTCGAGGGTACAGCGTGTCGGGGAACCCCGAGCATGCTTATACGATCTACAAGAACATGATGGTCGATGGCTGCAACCCCAACGACGGTACGTACGCACAGCTCCCTAATCCATCTTGA

mRNA sequence

ATGTCCAGCACTTGTTGCAATGGTGCTTTTAGTAATTGTCAGATATACGCTTCTAGTTGTAGTGGATCATCGAGAGGATTGATATCGGAAAATCTGGGGGATTTTCGAACTGCGACTTTGTCTATGGCGAATTGGAAGAAGCACAGGAAGAAGCGGAAGAATGTTTGCCGGTTTGCGTTGCAAGATCCGGAGCAAGCGACGGTGGCGGTAAAAGAGAAGATGAAAATTCCAGTGTCCGAAGAGGAAATTCTTCAGGCTTTGAAATCGATGACGGATACTACGCGTGCTCTTTCTTATTTTTACTCGGTACCTGATTTTCCTTGTGTTCAGCATACCACTGAGACGTGCAATTTCATGCTTGAATTCTTAAGAGTTCATGAGAAGGTGGAGGATATGGCTACTGTTTTTGAATTTATGCAGAAGAAAATTATTAGGAGGGATTTGAGCACTTATTTGACTATCTTTAAAGCTCTTTCCATCAGGGGTGGCCTTCGGCAGGTGACGATTGCGCTAAAGAAGATGAGAAAAGCTGGATTTGTCTTGAATGCATATTCATACAACGGATTGATCCATTTGTTGATTCAATCAGGATTCTGTAGTGAGGCCTTGGAAGTTTATAGAAGAATGGTTTCAGAAGGGCTTAAGCCGAGCCTGAAGACGTATTCGGCACTTATGGTTGCGTTGGGAAAGAAGAGGGACTCGGAAACGGTAATGGTTCTGTTGAAAGAGATGGAAAGTTTGGGATTGAGACCAAATGTTTACACTTATACAATATGCATCAGAGTGCTAGGGAGGGCTGGGAAAATCGACGAGGCGTATGAGATATTTAGGAGAATGGACGAGGAAGGTTGTGGACCCGACCTTGTTACGTATACAGTCCTCATCGACGCTCTTTGTAATGCAGGACGGTTGGAAAGTGCCAAGGAGTTGTTTGTGAAGATGAAAGCTAATGGTCACAAACCTGATCAAGTAATCTACATTACTTTGTTAGATAAGTTCAATGATTTTGGAGATCTGGACACTGTCAAAGAATTTTGGAGTCAGATGGAAGCTGATGGATATATGCCCGATGTCGTTACCTTCACTATTCTCGTTGACACCTTATGCAAAGCCAGAGACTTCGATGAGGCGTTCGCTACCTTTGATGTCATGAGAAAGCAAGGCATCTTGCCAAATCTTCATACTTATAACACACTTATTTGTGGACTTCTGAAGGCAGGTAGAATTGAGGATGCACTAAAGCTTTTAGATACCATGGAATCCTTAGGTGTTCAGCCGACTGCTTATACGTACGTTATTTTTATCGACTATTTCGGAAAGTCCGGAGATACTGGCAAAGCTGTTGAGACCTTTGAGAAGATGAAAGCTAGAGGAATCGTTCCAAATATCGTAGCGTGCAATGCATCGTTGTATAGCCTTGCTGAAACGGGGAGGTTGAGAGAAGCAAAAAACATGTTCAATGGGCTAAGAGAGAATGGTCTTGCTCCAGATTCAGTGACCTATAACATGATGATGAAGTGCTACAGCAAAGTAGGACAAGTAGACGACGCCGTGAATTTACTTTTCGAGATGATAAAAAATGGATGTGAACCTGATGTGATTGTGGTTAACTCTTTGATCGATTCGCTTTACAAGGCGGGACGAGTTGATGAAGCATGGAAAATGTTCGACAGAATGAAGGACATGAAGCTTTCTCCAACAGTTGTGACGTTTAATACGTTACTCTCTGGATTAGGGAAAGAGGGTCGAGTCCAGAAAGCCATTGAATTATTCGAAAGTATGATTAAGCAAAGGTGTTCTCCGAACACGATATCGTTTAACACGCTCCTGGATTGCTTTTGCAAAAACGACGAGATTGAATTGGCTTTGGAAATGTTTTCTAAAATGACAGAAATGGACTGTAAACCTGATGTCTTGACTTACAACACTGTTATTTATGGGCTGATCAAAGAAAACAGAGTAAATTATGCATTCTGGTTCTTCCACCAGTTGAAGAAATCGATGTACCCCGATCATGTCACAATATGTACCCTCCTTCCCGGTATCGTGAAGAGCGGGCGGATAGGGGATGCTATAAAGATTGCAAAGGATTTCATCAACCAGGTCCAGTTTCGTGTAAATAGATCCTTTTGGGAAGATTTAATGGGAGGAACTTTGGTTGAAGCTGAGATAGACAAGGCTGTTATATTTGCTGAAGAATTGGTACTGAATGGGATTTGCAGGGAAGACTCATTCTTGATACCTCTAATTAGAGTTTTGTGTAAGCAAAAGAGAGCACTTTATGCTTATCAAATATTTGAGAACTTCACGACGAATCTCGAAATCAAACCGACAGTGGCATCATATAATTGTTTGATAGGTGAGCTTCTTGAAGTTCATTACACCGAAAAGGCCTGGGATCTGTTTCAGGATATGAAGAACGCCGCCTGTGCTCCTGATACTTTTACCTACAACATGTTGCTCGATGTTCATGGAAAGTCGGGGAAGATCGCCGAACTTTTTGAACTGTACAATGAGATGGTTTCGAGGAAATGCAAGCCAAACGTCATAACTTACAACATCGTCATCTCCAGCCTTGCAAAATCTAATAACTTGGATAAAGCTTTAGATTTTTACTATGATCTTGTTAGTAGTGATTTCTGCCCCACTCCTTGTACGTACGGCCCTCTGCTCGACGGACTAGCAAAAGCGGGGCGCTTAGAGGAAGCGATGCAGCTCTTCGAAGAGATGCCAGACTATGGATGCAAGCCAAACTGTGCAATATTCAACATTCTGATAAATGGATATGGGAAAACAGGTGACATAGAAATCGCTCATCAGTTGTTTAAAAGGATGGTGAAGGAGGGTATAAGGCCAGACTTGAAGTCATACACCATTTTGGTAGAATGCCTTTGCCTTGCTGGAAAAGTAGATGAAGCCTTATACTATTTCGAGGAGCTGAAATCAACCGGTCTTGATCCCGACTTTATCGCTTATAATCGTATAATAAACGGTCTAGGAAAATCGCAGAGGATGGAGGAAGCGCTCGCTTTATACAGCGAAATGCGAGAGAGAGGCATTGTTCCTGACCTGCACACATATAATGCAATGTTGCTTTATCTTGGGCTTGCTGGAATGGTGGAAGAAGCCGAGAGAATGTATGAAGAGCTTCAACTTGCAGGGCTAGAACCAGATGTCTTTACTTATAACGCTCTCATTCGAGGGTACAGCGTGTCGGGGAACCCCGAGCATGCTTATACGATCTACAAGAACATGATGGTCGATGGCTGCAACCCCAACGACGGTACGTACGCACAGCTCCCTAATCCATCTTGA

Coding sequence (CDS)

ATGTCCAGCACTTGTTGCAATGGTGCTTTTAGTAATTGTCAGATATACGCTTCTAGTTGTAGTGGATCATCGAGAGGATTGATATCGGAAAATCTGGGGGATTTTCGAACTGCGACTTTGTCTATGGCGAATTGGAAGAAGCACAGGAAGAAGCGGAAGAATGTTTGCCGGTTTGCGTTGCAAGATCCGGAGCAAGCGACGGTGGCGGTAAAAGAGAAGATGAAAATTCCAGTGTCCGAAGAGGAAATTCTTCAGGCTTTGAAATCGATGACGGATACTACGCGTGCTCTTTCTTATTTTTACTCGGTACCTGATTTTCCTTGTGTTCAGCATACCACTGAGACGTGCAATTTCATGCTTGAATTCTTAAGAGTTCATGAGAAGGTGGAGGATATGGCTACTGTTTTTGAATTTATGCAGAAGAAAATTATTAGGAGGGATTTGAGCACTTATTTGACTATCTTTAAAGCTCTTTCCATCAGGGGTGGCCTTCGGCAGGTGACGATTGCGCTAAAGAAGATGAGAAAAGCTGGATTTGTCTTGAATGCATATTCATACAACGGATTGATCCATTTGTTGATTCAATCAGGATTCTGTAGTGAGGCCTTGGAAGTTTATAGAAGAATGGTTTCAGAAGGGCTTAAGCCGAGCCTGAAGACGTATTCGGCACTTATGGTTGCGTTGGGAAAGAAGAGGGACTCGGAAACGGTAATGGTTCTGTTGAAAGAGATGGAAAGTTTGGGATTGAGACCAAATGTTTACACTTATACAATATGCATCAGAGTGCTAGGGAGGGCTGGGAAAATCGACGAGGCGTATGAGATATTTAGGAGAATGGACGAGGAAGGTTGTGGACCCGACCTTGTTACGTATACAGTCCTCATCGACGCTCTTTGTAATGCAGGACGGTTGGAAAGTGCCAAGGAGTTGTTTGTGAAGATGAAAGCTAATGGTCACAAACCTGATCAAGTAATCTACATTACTTTGTTAGATAAGTTCAATGATTTTGGAGATCTGGACACTGTCAAAGAATTTTGGAGTCAGATGGAAGCTGATGGATATATGCCCGATGTCGTTACCTTCACTATTCTCGTTGACACCTTATGCAAAGCCAGAGACTTCGATGAGGCGTTCGCTACCTTTGATGTCATGAGAAAGCAAGGCATCTTGCCAAATCTTCATACTTATAACACACTTATTTGTGGACTTCTGAAGGCAGGTAGAATTGAGGATGCACTAAAGCTTTTAGATACCATGGAATCCTTAGGTGTTCAGCCGACTGCTTATACGTACGTTATTTTTATCGACTATTTCGGAAAGTCCGGAGATACTGGCAAAGCTGTTGAGACCTTTGAGAAGATGAAAGCTAGAGGAATCGTTCCAAATATCGTAGCGTGCAATGCATCGTTGTATAGCCTTGCTGAAACGGGGAGGTTGAGAGAAGCAAAAAACATGTTCAATGGGCTAAGAGAGAATGGTCTTGCTCCAGATTCAGTGACCTATAACATGATGATGAAGTGCTACAGCAAAGTAGGACAAGTAGACGACGCCGTGAATTTACTTTTCGAGATGATAAAAAATGGATGTGAACCTGATGTGATTGTGGTTAACTCTTTGATCGATTCGCTTTACAAGGCGGGACGAGTTGATGAAGCATGGAAAATGTTCGACAGAATGAAGGACATGAAGCTTTCTCCAACAGTTGTGACGTTTAATACGTTACTCTCTGGATTAGGGAAAGAGGGTCGAGTCCAGAAAGCCATTGAATTATTCGAAAGTATGATTAAGCAAAGGTGTTCTCCGAACACGATATCGTTTAACACGCTCCTGGATTGCTTTTGCAAAAACGACGAGATTGAATTGGCTTTGGAAATGTTTTCTAAAATGACAGAAATGGACTGTAAACCTGATGTCTTGACTTACAACACTGTTATTTATGGGCTGATCAAAGAAAACAGAGTAAATTATGCATTCTGGTTCTTCCACCAGTTGAAGAAATCGATGTACCCCGATCATGTCACAATATGTACCCTCCTTCCCGGTATCGTGAAGAGCGGGCGGATAGGGGATGCTATAAAGATTGCAAAGGATTTCATCAACCAGGTCCAGTTTCGTGTAAATAGATCCTTTTGGGAAGATTTAATGGGAGGAACTTTGGTTGAAGCTGAGATAGACAAGGCTGTTATATTTGCTGAAGAATTGGTACTGAATGGGATTTGCAGGGAAGACTCATTCTTGATACCTCTAATTAGAGTTTTGTGTAAGCAAAAGAGAGCACTTTATGCTTATCAAATATTTGAGAACTTCACGACGAATCTCGAAATCAAACCGACAGTGGCATCATATAATTGTTTGATAGGTGAGCTTCTTGAAGTTCATTACACCGAAAAGGCCTGGGATCTGTTTCAGGATATGAAGAACGCCGCCTGTGCTCCTGATACTTTTACCTACAACATGTTGCTCGATGTTCATGGAAAGTCGGGGAAGATCGCCGAACTTTTTGAACTGTACAATGAGATGGTTTCGAGGAAATGCAAGCCAAACGTCATAACTTACAACATCGTCATCTCCAGCCTTGCAAAATCTAATAACTTGGATAAAGCTTTAGATTTTTACTATGATCTTGTTAGTAGTGATTTCTGCCCCACTCCTTGTACGTACGGCCCTCTGCTCGACGGACTAGCAAAAGCGGGGCGCTTAGAGGAAGCGATGCAGCTCTTCGAAGAGATGCCAGACTATGGATGCAAGCCAAACTGTGCAATATTCAACATTCTGATAAATGGATATGGGAAAACAGGTGACATAGAAATCGCTCATCAGTTGTTTAAAAGGATGGTGAAGGAGGGTATAAGGCCAGACTTGAAGTCATACACCATTTTGGTAGAATGCCTTTGCCTTGCTGGAAAAGTAGATGAAGCCTTATACTATTTCGAGGAGCTGAAATCAACCGGTCTTGATCCCGACTTTATCGCTTATAATCGTATAATAAACGGTCTAGGAAAATCGCAGAGGATGGAGGAAGCGCTCGCTTTATACAGCGAAATGCGAGAGAGAGGCATTGTTCCTGACCTGCACACATATAATGCAATGTTGCTTTATCTTGGGCTTGCTGGAATGGTGGAAGAAGCCGAGAGAATGTATGAAGAGCTTCAACTTGCAGGGCTAGAACCAGATGTCTTTACTTATAACGCTCTCATTCGAGGGTACAGCGTGTCGGGGAACCCCGAGCATGCTTATACGATCTACAAGAACATGATGGTCGATGGCTGCAACCCCAACGACGGTACGTACGCACAGCTCCCTAATCCATCTTGA

Protein sequence

MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFALQDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFMLEFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFVLNAYSYNGLIHLLIQSGFCSEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWSQMEADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAETGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTFNTLLSGLGKEGRVQKAIELFESMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKSGKIAELFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYTILVECLCLAGKVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPEHAYTIYKNMMVDGCNPNDGTYAQLPNPS
Homology
[Close]
BLAST of Carg02833 vs. NCBI nr
Match: XP_023536419.1 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.5 bits (1321), Expect = 1.8e-141
Identity = 777/809 (96.04%), Postives = 782/809 (96.66%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M STCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL
Sbjct: 11  MFSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 70

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PE+ATVAVKEK KIPVSEEEIL+ALKSMTDTTRALSYFYSVPDFPCVQHTTETCNF+L
Sbjct: 71  QNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFVL 130

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVHEKVEDMA VFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV
Sbjct: 131 EFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 190

Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LNAYSYNGLIHLLIQSGFCSEALEVY RMV                       XXXXXXX
Sbjct: 191 LNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDXXXXXXX 250

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 550

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 551 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 611 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 670

Query: 661 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
           XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV
Sbjct: 671 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 730

Query: 721 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
           EAEIDKA+IFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA
Sbjct: 731 EAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 790

Query: 781 SYNCLIGELLEVHYTEKAWDLFQDMKNAA 810
           SYNCLIGELLEVHYTEKAWDLFQDMKNAA
Sbjct: 791 SYNCLIGELLEVHYTEKAWDLFQDMKNAA 819

[Close]
BLAST of Carg02833 vs. NCBI nr
Match: XP_022937237.1 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucurbita moschata])

HSP 1 Score: 513.1 bits (1320), Expect = 2.4e-141
Identity = 800/811 (98.64%), Postives = 804/811 (99.14%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M STCCNGAFSNCQI ASSCSGSSRGLISENLG FRTATLSMANWKKHRKKRKNVCRFAL
Sbjct: 11  MFSTCCNGAFSNCQISASSCSGSSRGLISENLGGFRTATLSMANWKKHRKKRKNVCRFAL 70

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PE+ TVAVKEK KIPVSEEEIL+ALKSMTDTT ALSYFYS+PDFPCVQHTTETCNFML
Sbjct: 71  QNPEEVTVAVKEKTKIPVSEEEILRALKSMTDTTHALSYFYSIPDFPCVQHTTETCNFML 130

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVHEKVEDMA VFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV
Sbjct: 131 EFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 190

Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 191 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 550

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 551 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 611 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 670

Query: 661 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
           XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV
Sbjct: 671 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 730

Query: 721 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
           EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA
Sbjct: 731 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 790

Query: 781 SYNCLIGELLEVHYTEKAWDLFQDMKNAACA 812
           SYNCLIGELLEVHYTEKAWDLFQDMKNAACA
Sbjct: 791 SYNCLIGELLEVHYTEKAWDLFQDMKNAACA 821

[Close]
BLAST of Carg02833 vs. NCBI nr
Match: XP_022976228.1 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucurbita maxima])

HSP 1 Score: 499.2 bits (1284), Expect = 3.6e-137
Identity = 792/811 (97.66%), Postives = 797/811 (98.27%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M STCCNGAFSNCQIYASSCSGSSRGLISEN GDFRTATLSMANWKKHRKKRKNVCRFAL
Sbjct: 11  MFSTCCNGAFSNCQIYASSCSGSSRGLISENQGDFRTATLSMANWKKHRKKRKNVCRFAL 70

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PE+  VAVKEK K PVSEEEIL+ALKSMTDTTRALSYFYS+PDFPCVQHTTETCNFML
Sbjct: 71  QNPEEMMVAVKEKTKNPVSEEEILRALKSMTDTTRALSYFYSIPDFPCVQHTTETCNFML 130

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVHEKVEDMA +FEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMR AGFV
Sbjct: 131 EFLRVHEKVEDMAAIFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRTAGFV 190

Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LNAYSYNGLIHLLIQSGFCSEALEVYRR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 191 LNAYSYNGLIHLLIQSGFCSEALEVYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 550

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 551 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 611 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 670

Query: 661 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
           XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQF VNRSFWEDLMGGTLV
Sbjct: 671 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFHVNRSFWEDLMGGTLV 730

Query: 721 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
           EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTT LEIKPTV 
Sbjct: 731 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTKLEIKPTVV 790

Query: 781 SYNCLIGELLEVHYTEKAWDLFQDMKNAACA 812
           SYNCLIGELLEVHYTEKAWDLFQDMKN ACA
Sbjct: 791 SYNCLIGELLEVHYTEKAWDLFQDMKNTACA 821

[Close]
BLAST of Carg02833 vs. NCBI nr
Match: XP_022142283.1 (pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Momordica charantia])

HSP 1 Score: 384.0 bits (985), Expect = 1.7e-102
Identity = 732/811 (90.26%), Postives = 765/811 (94.33%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M S+CCNGAFS+CQ+ A SC+GSS GLI E LGDF+T +LS+ANWKKHRK+R    R AL
Sbjct: 1   MLSSCCNGAFSDCQMSALSCNGSSGGLIWEKLGDFQTVSLSLANWKKHRKRRTGFFRLAL 60

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PEQ  +AV  K KIPVS +E+L+ LKSM+D  RALSYFYS+ +FP V HTTETCNFML
Sbjct: 61  QNPEQ-VMAVNVKAKIPVSGDEVLRVLKSMSDLARALSYFYSISEFPTVLHTTETCNFML 120

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVHEKVEDMA VFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV
Sbjct: 121 EFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180

Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LNAYSYNGLIHLLIQSG CSEA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 LNAYSYNGLIHLLIQSGSCSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660

Query: 661 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
           XXX KKSMYPDHVTICTLLPG+VK G+IGDA+ IAKDF++QV+F VNRSFWEDLMGGTLV
Sbjct: 661 XXXLKKSMYPDHVTICTLLPGVVKYGQIGDAVNIAKDFMHQVRFHVNRSFWEDLMGGTLV 720

Query: 721 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
           EAE+DKA+IFAEELVLNGIC+EDSFL+PL+RVLCK KR L+A++IFE FT  L I PT+A
Sbjct: 721 EAEMDKAIIFAEELVLNGICKEDSFLVPLVRVLCKHKRTLHAHKIFEKFTKRLGINPTLA 780

Query: 781 SYNCLIGELLEVHYTEKAWDLFQDMKNAACA 812
           SYNCLIGELLEVHYT+KAWDLF+DMKN ACA
Sbjct: 781 SYNCLIGELLEVHYTKKAWDLFKDMKNGACA 810

[Close]
BLAST of Carg02833 vs. NCBI nr
Match: XP_008452843.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 6.4e-102
Identity = 732/805 (90.93%), Postives = 757/805 (94.04%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M  TCCNGAFS CQIY SSC+ SSRGLI E+LGDF+TATLSM NWKKHRKKRK+ CR AL
Sbjct: 11  MFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 70

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PEQ  V VK K +I VSE+E+L  LKSMTD  RALSYFYS+ +FP V HTTETCNFML
Sbjct: 71  QNPEQVMV-VKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFML 130

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVH+KVEDMA VF+ MQKKIIRRDL+TYLTIFKALSIRGGLRQ+T  L KMR+AGFV
Sbjct: 131 EFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVLNKMRRAGFV 190

Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LNAYSYNGLIHLLIQSGFC EA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 191 LNAYSYNGLIHLLIQSGFCGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 550

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 551 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 611 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 670

Query: 661 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
           XX  KKS++PDHVTICTLLPG+VK GRIGDAIKIA+DF+ QV+FRVNRSFWEDLMGGTLV
Sbjct: 671 XXQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFWEDLMGGTLV 730

Query: 721 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
           EAE+DKA+IFAEELVLNGICREDSFLIPL+RVLCK KR LYAYQIFE FT  L I PT+A
Sbjct: 731 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTKKLGISPTLA 790

Query: 781 SYNCLIGELLEVHYTEKAWDLFQDM 806
           SYNCLIGELLEV YTEKAWDLFQDM
Sbjct: 791 SYNCLIGELLEVRYTEKAWDLFQDM 814

[Close]
BLAST of Carg02833 vs. TAIR10
Match: AT4G31850.1 (proton gradient regulation 3)

HSP 1 Score: 136.7 bits (343), Expect = 8.5e-32
Identity = 70/139 (50.36%), Postives = 89/139 (64.03%), Query Frame = 0 

Query: 665 KKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEI 724
           KK +YPD VT+CTLLPG+VK+  I DA KI  +F+     +    FWEDL+G  L EA I
Sbjct: 670 KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGI 729

Query: 725 DKAVIFAEELVLNGICRE-DSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVASYN 784
           D AV F+E LV NGICR+ DS L+P+IR  CK      A  +FE FT +L ++P + +YN
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789

Query: 785 CLIGELLEVHYTEKAWDLF 803
            LIG LLE    E A D+F
Sbjct: 790 LLIGGLLEADMIEIAQDVF 808

[Close]
BLAST of Carg02833 vs. Swiss-Prot
Match: sp|Q9SZ52|PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-30
Identity = 70/139 (50.36%), Postives = 89/139 (64.03%), Query Frame = 0 

Query: 665 KKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEI 724
           KK +YPD VT+CTLLPG+VK+  I DA KI  +F+     +    FWEDL+G  L EA I
Sbjct: 670 KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGI 729

Query: 725 DKAVIFAEELVLNGICRE-DSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVASYN 784
           D AV F+E LV NGICR+ DS L+P+IR  CK      A  +FE FT +L ++P + +YN
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789

Query: 785 CLIGELLEVHYTEKAWDLF 803
            LIG LLE    E A D+F
Sbjct: 790 LLIGGLLEADMIEIAQDVF 808

[Close]
BLAST of Carg02833 vs. TrEMBL
Match: tr|A0A1S3BUU7|A0A1S3BUU7_CUCME (pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493741 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.2e-102
Identity = 732/805 (90.93%), Postives = 757/805 (94.04%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M  TCCNGAFS CQIY SSC+ SSRGLI E+LGDF+TATLSM NWKKHRKKRK+ CR AL
Sbjct: 11  MFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 70

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PEQ  V VK K +I VSE+E+L  LKSMTD  RALSYFYS+ +FP V HTTETCNFML
Sbjct: 71  QNPEQVMV-VKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFML 130

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVH+KVEDMA VF+ MQKKIIRRDL+TYLTIFKALSIRGGLRQ+T  L KMR+AGFV
Sbjct: 131 EFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVLNKMRRAGFV 190

Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LNAYSYNGLIHLLIQSGFC EA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 191 LNAYSYNGLIHLLIQSGFCGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 550

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 551 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 611 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 670

Query: 661 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
           XX  KKS++PDHVTICTLLPG+VK GRIGDAIKIA+DF+ QV+FRVNRSFWEDLMGGTLV
Sbjct: 671 XXQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFWEDLMGGTLV 730

Query: 721 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
           EAE+DKA+IFAEELVLNGICREDSFLIPL+RVLCK KR LYAYQIFE FT  L I PT+A
Sbjct: 731 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTKKLGISPTLA 790

Query: 781 SYNCLIGELLEVHYTEKAWDLFQDM 806
           SYNCLIGELLEV YTEKAWDLFQDM
Sbjct: 791 SYNCLIGELLEVRYTEKAWDLFQDM 814

[Close]
BLAST of Carg02833 vs. TrEMBL
Match: tr|A0A1S4DZB2|A0A1S4DZB2_CUCME (pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493741 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 8.0e-101
Identity = 705/805 (87.58%), Postives = 730/805 (90.68%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M  TCCNGAFS CQIY SSC+ SSRGLI E+LGDF+TATLSM NWKKHRKKRK+ CR AL
Sbjct: 11  MFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 70

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PEQ  V VK K +I VSE+E+L  LKSMTD  RALSYFYS+ +FP V HTTETCNFML
Sbjct: 71  QNPEQVMV-VKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFML 130

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVH+KVEDMA VF+ MQKKIIRRDL+TYLTIFKALSIRGGLRQ+T  L KMR+AGFV
Sbjct: 131 EFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVLNKMRRAGFV 190

Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYRRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LNAYSYNGLIHLLIQSGFC EA                                   XXX
Sbjct: 191 LNAYSYNGLIHLLIQSGFCGEA-----------------------------------XXX 250

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 550

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 551 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 611 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 670

Query: 661 XXXXKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
           XX  KKS++PDHVTICTLLPG+VK GRIGDAIKIA+DF+ QV+FRVNRSFWEDLMGGTLV
Sbjct: 671 XXQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFWEDLMGGTLV 730

Query: 721 EAEIDKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
           EAE+DKA+IFAEELVLNGICREDSFLIPL+RVLCK KR LYAYQIFE FT  L I PT+A
Sbjct: 731 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTKKLGISPTLA 779

Query: 781 SYNCLIGELLEVHYTEKAWDLFQDM 806
           SYNCLIGELLEV YTEKAWDLFQDM
Sbjct: 791 SYNCLIGELLEVRYTEKAWDLFQDM 779

[Close]
BLAST of Carg02833 vs. TrEMBL
Match: tr|A0A0A0L492|A0A0A0L492_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651880 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.8e-80
Identity = 159/199 (79.90%), Postives = 172/199 (86.43%), Query Frame = 0 

Query: 1   MSSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
           M  TCCNGAFS CQ+Y SSC+ SSRGLI E+LGDF+TATLSM NWKKHRKKRK+ CR AL
Sbjct: 11  MFGTCCNGAFSECQVYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 70

Query: 61  QDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFML 120
           Q+PEQ  V VK K +I VSE+E+L  LKSMTD  RALSYFYS+ +FP V HTTETCNFML
Sbjct: 71  QNPEQVMV-VKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFML 130

Query: 121 EFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
           EFLRVH+KVEDMA VFEFMQKKIIRRDL TYLTIFKALSIRGGLRQ+T  L KMRKAGFV
Sbjct: 131 EFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFV 190

Query: 181 LNAYSYNGLIHLLIQSGFC 200
           LNAYSYNGLIHLLIQSGFC
Sbjct: 191 LNAYSYNGLIHLLIQSGFC 208

[Close]
BLAST of Carg02833 vs. TrEMBL
Match: tr|A0A0A0L5J9|A0A0A0L5J9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651870 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-63
Identity = 118/140 (84.29%), Postives = 130/140 (92.86%), Query Frame = 0 

Query: 665 KKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEI 724
           KKSM+PDHVTICTLLPG+VK G+IGDAI IA+DF+ QV+FRVNRSFWEDLMGGTLVEAE+
Sbjct: 190 KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEM 249

Query: 725 DKAVIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVASYNC 784
           DKA+IFAEELVLNGICREDSFLIPL+RVLCK KR LYAYQIF+ FT  L I PT+ASYNC
Sbjct: 250 DKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 309

Query: 785 LIGELLEVHYTEKAWDLFQD 805
           LIGELLEVHYTEKAWDLF+D
Sbjct: 310 LIGELLEVHYTEKAWDLFKD 329

[Close]
BLAST of Carg02833 vs. TrEMBL
Match: tr|A0A2I4HHB2|A0A2I4HHB2_9ROSI (pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Juglans regia OX=51240 GN=LOC109017823 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.1e-49
Identity = 120/214 (56.07%), Postives = 142/214 (66.36%), Query Frame = 0 

Query: 2   SSTCCNG-----AFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVC 61
           SS  C G     AF++ +IY  S +GS  G  S +L    +   S  NWKKHR+K    C
Sbjct: 9   SSIFCTGIAYACAFTDSKIYGLSHNGSVGGRSSRHLKTLPSG--STVNWKKHRRKLVGFC 68

Query: 62  RFALQDPEQATVAVKEKMKIPVSEEEILQALKSMTDTTRALSYFYSVPDFPCVQHTTETC 121
            F ++ P+   VA K K    VS EE +  LKS++D   A SYF  V   P V HTTETC
Sbjct: 69  GFVMKSPDGVVVA-KGKPNKAVSSEEFIGVLKSISDPKCAFSYFNYVAQLPSVVHTTETC 128

Query: 122 NFMLEFLRVHEKVEDMATVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRK 181
           NFMLE LR+H +V DMA VF+ MQK+II R++ TYLTIFK L IRGG+R+   AL KMRK
Sbjct: 129 NFMLEVLRIHRRVGDMALVFDLMQKQIINRNMKTYLTIFKGLYIRGGIRRAPSALVKMRK 188

Query: 182 AGFVLNAYSYNGLIHLLIQSGFCSEALEVYRRMV 211
           AGFVLNAYSYNGLIHLL+QSGFC EALEVYR MV
Sbjct: 189 AGFVLNAYSYNGLIHLLLQSGFCREALEVYRGMV 219

The following BLAST results are available for this feature:
BLAST of Carg02833 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023536419.11.8e-14196.04pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucurbita ... [more]
XP_022937237.12.4e-14198.64pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucurbita ... [more]
XP_022976228.13.6e-13797.66pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucurbita ... [more]
XP_022142283.11.7e-10290.26pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Momordica ... [more]
XP_008452843.16.4e-10290.93PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic ... [more]
BLAST of Carg02833 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31850.18.5e-3250.36proton gradient regulation 3[more]
BLAST of Carg02833 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SZ52|PP344_ARATH1.5e-3050.36Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
BLAST of Carg02833 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BUU7|A0A1S3BUU7_CUCME4.2e-10290.93pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X1 ... [more]
tr|A0A1S4DZB2|A0A1S4DZB2_CUCME8.0e-10187.58pentatricopeptide repeat-containing protein At4g31850, chloroplastic isoform X2 ... [more]
tr|A0A0A0L492|A0A0A0L492_CUCSA7.8e-8079.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651880 PE=4 SV=1[more]
tr|A0A0A0L5J9|A0A0A0L5J9_CUCSA3.9e-6384.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651870 PE=4 SV=1[more]
tr|A0A2I4HHB2|A0A2I4HHB2_9ROSI7.1e-4956.07pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Juglans ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02833-RACarg02833-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 781..807
e-value: 0.44
score: 10.8
coord: 536..562
e-value: 1.8E-6
score: 27.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 880..910
e-value: 4.1E-9
score: 35.9
coord: 352..385
e-value: 2.3E-10
score: 39.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 171..230
e-value: 6.4E-9
score: 35.7
coord: 240..298
e-value: 2.3E-13
score: 49.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 920..965
e-value: 8.0E-13
score: 48.3
coord: 987..1031
e-value: 5.5E-13
score: 48.8
coord: 496..533
e-value: 7.3E-11
score: 42.0
coord: 636..682
e-value: 2.8E-7
score: 30.5
coord: 566..615
e-value: 1.1E-16
score: 60.6
coord: 812..861
e-value: 4.0E-16
score: 58.8
coord: 391..438
e-value: 1.5E-14
score: 53.8
coord: 1057..1097
e-value: 2.9E-9
score: 36.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 781..814
e-value: 1.4E-4
score: 19.8
coord: 429..463
e-value: 3.9E-8
score: 31.0
coord: 604..638
e-value: 5.7E-10
score: 36.7
coord: 1060..1093
e-value: 6.2E-9
score: 33.5
coord: 394..427
e-value: 1.0E-9
score: 36.0
coord: 254..287
e-value: 1.1E-9
score: 35.9
coord: 359..392
e-value: 8.6E-9
score: 33.0
coord: 1025..1059
e-value: 9.5E-7
score: 26.6
coord: 921..953
e-value: 1.9E-9
score: 35.1
coord: 220..253
e-value: 5.0E-5
score: 21.2
coord: 499..533
e-value: 1.4E-11
score: 41.8
coord: 815..849
e-value: 3.9E-9
score: 34.1
coord: 850..883
e-value: 1.3E-7
score: 29.4
coord: 991..1023
e-value: 4.5E-10
score: 37.1
coord: 885..919
e-value: 2.8E-10
score: 37.7
coord: 956..988
e-value: 9.7E-8
score: 29.7
coord: 184..217
e-value: 2.6E-6
score: 25.2
coord: 289..322
e-value: 3.9E-10
score: 37.3
coord: 535..567
e-value: 1.3E-8
score: 32.4
coord: 569..603
e-value: 3.7E-11
score: 40.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 497..531
score: 13.998
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..426
score: 13.307
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 988..1022
score: 13.165
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..321
score: 13.68
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..391
score: 12.704
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..251
score: 10.084
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 778..812
score: 9.46
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 918..952
score: 12.902
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 12.847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 671..701
score: 6.062
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..181
score: 7.333
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 813..847
score: 12.211
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 12.057
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 602..636
score: 12.375
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 112..146
score: 6.084
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 567..601
score: 12.934
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1058..1092
score: 12.573
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 848..882
score: 11.016
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 637..667
score: 8.846
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..356
score: 9.295
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 532..566
score: 12.496
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 462..496
score: 9.865
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 883..917
score: 13.395
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 427..461
score: 11.224
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 953..987
score: 11.838
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1023..1057
score: 11.356
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 65..185
e-value: 2.0E-8
score: 35.8
coord: 333..439
e-value: 4.5E-32
score: 112.8
coord: 227..332
e-value: 1.1E-32
score: 114.9
coord: 860..967
e-value: 1.0E-33
score: 118.2
coord: 741..859
e-value: 9.5E-31
score: 108.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 631..701
e-value: 4.7E-14
score: 54.3
coord: 562..630
e-value: 7.9E-23
score: 82.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 972..1102
e-value: 3.1E-35
score: 124.2
coord: 440..561
e-value: 3.0E-34
score: 121.0
NoneNo IPR availablePANTHERPTHR24015:SF612SUBFAMILY NOT NAMEDcoord: 1022..1098
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1022..1098
NoneNo IPR availablePANTHERPTHR24015:SF612SUBFAMILY NOT NAMEDcoord: 43..927
coord: 922..1023
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 43..927
coord: 922..1023
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 372..457
coord: 496..642
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 891..1084
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 766..947

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg02833Cla021037Watermelon (97103) v1carwmB0630
Carg02833Csa4G651870Cucumber (Chinese Long) v2carcuB0656
Carg02833ClCG05G016190Watermelon (Charleston Gray)carwcgB0613
Carg02833CSPI04G26160Wild cucumber (PI 183967)carcpiB0666
Carg02833Cucsa.271450Cucumber (Gy14) v1carcgyB0710
Carg02833CmaCh09G004020Cucurbita maxima (Rimu)carcmaB0889
Carg02833CmoCh09G004060Cucurbita moschata (Rifu)carcmoB0865
Carg02833Lsi04G013440Bottle gourd (USVL1VR-Ls)carlsiB576
Carg02833Cp4.1LG06g02870Cucurbita pepo (Zucchini)carcpeB0906
Carg02833CsGy4G024470Cucumber (Gy14) v2carcgybB0633
Carg02833MELO3C032315.2Melon (DHL92) v3.6.1carmedB0642
Carg02833CsaV3_4G036480Cucumber (Chinese Long) v3carcucB0667
Carg02833Bhi09G002488Wax gourdcarwgoB0754
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg02833Watermelon (Charleston Gray)carwcgB0618
Carg02833Watermelon (97103) v1carwmB0629
Carg02833Watermelon (97103) v2carwmbB0659
Carg02833Watermelon (97103) v2carwmbB0663
Carg02833Watermelon (97103) v2carwmbB0665
Carg02833Wax gourdcarwgoB0750
Carg02833Wax gourdcarwgoB0756
Carg02833Cucurbita pepo (Zucchini)carcpeB0897
Carg02833Silver-seed gourdcarcarB154
Carg02833Silver-seed gourdcarcarB163
Carg02833Silver-seed gourdcarcarB492
Carg02833Silver-seed gourdcarcarB556
Carg02833Silver-seed gourdcarcarB558
Carg02833Cucumber (Gy14) v2carcgybB0631
Carg02833Cucumber (Gy14) v1carcgyB0709
Carg02833Cucurbita maxima (Rimu)carcmaB0890
Carg02833Cucurbita maxima (Rimu)carcmaB0891
Carg02833Cucurbita maxima (Rimu)carcmaB0896
Carg02833Cucurbita maxima (Rimu)carcmaB0901
Carg02833Cucurbita moschata (Rifu)carcmoB0866
Carg02833Cucurbita moschata (Rifu)carcmoB0867
Carg02833Cucurbita moschata (Rifu)carcmoB0874
Carg02833Cucurbita moschata (Rifu)carcmoB0878
Carg02833Cucurbita pepo (Zucchini)carcpeB0895
Carg02833Cucurbita pepo (Zucchini)carcpeB0898
Carg02833Cucurbita pepo (Zucchini)carcpeB0905
Carg02833Wild cucumber (PI 183967)carcpiB0663
Carg02833Cucumber (Chinese Long) v2carcuB0654
Carg02833Cucumber (Chinese Long) v3carcucB0665
Carg02833Bottle gourd (USVL1VR-Ls)carlsiB580
Carg02833Melon (DHL92) v3.5.1carmeB0629
Carg02833Melon (DHL92) v3.5.1carmeB0633
Carg02833Melon (DHL92) v3.6.1carmedB0637