BLAST of Cp4.1LG06g02870 vs. Swiss-Prot
Match:
PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)
HSP 1 Score: 1411.0 bits (3651), Expect = 0.0e+00
Identity = 684/1075 (63.63%), Postives = 850/1075 (79.07%), Query Frame = 1
Query: 33 GDFRTATLSMANWKKHRKKRKNVCRFALQNPEEATVAVKEKTKIP--VSEEEILRALKSM 92
G + L + + KKH +++ C + + ++ K+ P S EE+ R LKS
Sbjct: 36 GGLKFHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSF 95
Query: 93 TDTTRALSYFYSVPDFPCVQHTTETCNFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLST 152
DT + SYF SV + HTTETCN++LE LRV K+E+MA VF+ MQK+II+RD +T
Sbjct: 96 PDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNT 155
Query: 153 YLTIFKALSIRGGLRQVTIALKKMRKAGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMV 212
YLTIFK+LS++GGL+Q AL+KMR+ GFVLNAYSYNGLIHLL++S FC+EA+EVY RM+
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 213 SEGLKPSLKTYSALMVALGKKRDSETVMVLLKEMESLGLRPNVYTYTICIRVLGRAGKID 272
EG +PSL+TYS+LMV LGK+RD ++VM LLKEME+LGL+PNVYT+TICIRVLGRAGKI+
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 273 EAYEIFRRMDEEGCGPDLVTYTVLIDALCNAGRLESAKELFVKMKANGHKPDQVIYITLL 332
EAYEI +RMD+EGCGPD+VTYTVLIDALC A +L+ AKE+F KMK HKPD+V YITLL
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 333 DKFNDFGDLDTVKEFWGQMEADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMRKQGIL 392
D+F+D DLD+VK+FW +ME DG++PDVVTFTILVD LCKA +F EAF T DVMR QGIL
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 393 PNLHTYNTLICGLLKAGRIEDALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVET 452
PNLHTYNTLICGLL+ R++DAL+L MESLGV+PTAYTY++FIDY+GKSGD+ A+ET
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 453 FEKMKARGIVPNIVACNASLYSLAESGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSK 512
FEKMK +GI PNIVACNASLYSLA++GR REAK +F GL++ GL PDSVTYNMMMKCYSK
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 513 VGQVDDAVNLLFEMIKNGCEPDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVT 572
VG++D+A+ LL EM++NGCEPDVIVVNSLI++LYKA RVDEAWKMF RMK+MKL PTVVT
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 573 YNTLLSGLGKEGRVQKAIELFESMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMT 632
YNTLL+GLGK G++Q+AIELFE M+++ C PNTI+FNTL DC CKNDE+ LAL+M KM
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 633 EMDCKPDVLTYNTVIYGLIKENRVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGD 692
+M C PDV TYNT+I+GL+K +V A FFHQ+KK +YPD VT+CTLLPG+VK+ I D
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 693 AIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEIDKAIIFAEELVLNGICRE-DSFLIPL 752
A KI +F+ + FWEDL+G L EA ID A+ F+E LV NGICR+ DS L+P+
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 753 IRVLCKQKRALYAYQIFENFTTNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAA 812
IR CK A +FE FT +L ++P + +YN LIG LLE E A D+F +K+
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 813 CAPDTFTYNMLLDVHGKLGKIAELFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKAL 872
C PD TYN LLD +GK GKI ELFELY EM + +C+ N IT+NIVIS L K+ N+D AL
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 873 DFYYDLVSS-DFCPTPCTYGPLLDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILING 932
D YYDL+S DF PT CTYGPL+DGL+K+GRL EA QLFE M DYGC+PNCAI+NILING
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 933 YGKTGDIEIAHQLFKRMVKEGIRPDLKSYTILVECLCLAGRVDEALYYFEELKSTGLDPD 992
+GK G+ + A LFKRMVKEG+RPDLK+Y++LV+CLC+ GRVDE L+YF+ELK +GL+PD
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 993 FIAYNRIINGLGKSQRMEEALALYSEMR-ERGIVPDLHTYNAMLLYLGLAGMVEEAERMY 1052
+ YN IINGLGKS R+EEAL L++EM+ RGI PDL+TYN+++L LG+AGMVEEA ++Y
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 1053 EELQLAGLEPDVFTYNALIRGYSVSGNPEHAYTVYKNMMVDGCNPNDGTYAQLPN 1103
E+Q AGLEP+VFT+NALIRGYS+SG PEHAY VY+ M+ G +PN GTY QLPN
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
BLAST of Cp4.1LG06g02870 vs. Swiss-Prot
Match:
PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)
HSP 1 Score: 347.8 bits (891), Expect = 4.3e-94
Identity = 205/719 (28.51%), Postives = 348/719 (48.40%), Query Frame = 1
Query: 338 DLDTVKEFWGQMEADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYN 397
+ D + + G+M G+ P V T +V KA E + +MRK P Y
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172
Query: 398 TLICGLLKAGRIEDALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKAR 457
TLI + L L M+ LG +PT + + I F K G A+ ++MK+
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232
Query: 458 GIVPNIVACNASLYSLAESGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDA 517
+ +IV N + S + G++ A F+ + NGL PD VTY M+ K ++D+A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 518 VNLLFEMIKNGCEPDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSG 577
V + + KN P N++I AG+ DEA+ + +R + P+V+ YN +L+
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 578 LGKEGRVQKAIELFESMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPD 637
L K G+V +A+++FE M K+ +PN ++N L+D C+ +++ A E+ M + P+
Sbjct: 353 LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 412
Query: 638 VLTYNTVIYGLIKENRVNYAFWFFHQLK-KSMYPDHVTICTLLPGIVKSGRIGDAIKIAK 697
V T N ++ L K +++ A F ++ K PD +T C+L+ G+ K GR+ DA K+ +
Sbjct: 413 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 472
Query: 698 DFINQVQFRVNRSFWEDLMGGTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQ 757
++ R N + L+ + ++++ + L + + K
Sbjct: 473 KMLDS-DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 532
Query: 758 KRALYAYQIFENFTTNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFT 817
+FE P SY+ LI L++ + + ++LF MK C DT
Sbjct: 533 GEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 592
Query: 818 YNMLLDVHGKLGKIAELFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLV 877
YN+++D K GK+ + ++L EM ++ +P V+TY VI LAK + LD+A + +
Sbjct: 593 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 652
Query: 878 SSDFCPTPCTYGPLLDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIE 937
S Y L+DG K GR++EA + EE+ G PN +N L++ K +I
Sbjct: 653 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 712
Query: 938 IAHQLFKRMVKEGIRPDLKSYTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRII 997
A F+ M + P+ +Y IL+ LC + ++A +++E++ G+ P I+Y +I
Sbjct: 713 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 772
Query: 998 NGLGKSQRMEEALALYSEMRERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGL 1056
+GL K+ + EA AL+ + G VPD YNAM+ L +A ++EE + GL
Sbjct: 773 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
BLAST of Cp4.1LG06g02870 vs. Swiss-Prot
Match:
PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 337.0 bits (863), Expect = 7.6e-91
Identity = 219/836 (26.20%), Postives = 390/836 (46.65%), Query Frame = 1
Query: 240 LLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALC 299
+ + M G P+VYT + + ++G+ + + M + PD+ T+ +LI+ LC
Sbjct: 145 IFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLC 204
Query: 300 NAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMPDVV 359
G E + L KM+ +G+ P V Y T+L + G E M++ G DV
Sbjct: 205 AEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVC 264
Query: 360 TFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLLDTM 419
T+ +L+ LC++ + + MRK+ I PN TYNTLI G G++ A +LL+ M
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324
Query: 420 ESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAESGRL 479
S G+ P T+ ID G+ +A++ F M+A+G+ P+ V+ L L ++
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 480 REAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSL 539
A+ + ++ NG+ +TY M+ K G +D+AV LL EM K+G +PD++ ++L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 540 IDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIKQRC 599
I+ K GR A ++ R+ + LSP + Y+TL+ + G +++AI ++E+MI +
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504
Query: 600 SPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFW 659
+ + +FN L+ CK ++ A E MT P+ ++++ +I G AF
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 660 FFHQLKK-SMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGT 719
F ++ K +P T +LL G+ K G + +A K K ++ V V+ + L+
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-LHAVPAAVDTVMYNTLLTAM 624
Query: 720 LVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPT 779
+ KA+ E+V I + LI LC++ + + A + + P
Sbjct: 625 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 684
Query: 780 VASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFELYN 839
Y C + + + + + M N PD T N ++D + ++GKI + +L
Sbjct: 685 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 744
Query: 840 EMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAG 899
EM ++ PN+ TYNI++ +K ++ + Y ++ + P T L+ G+ ++
Sbjct: 745 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 804
Query: 900 RLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYT 959
LE +++ + G + + FN+LI+ G+I A L K M GI D +
Sbjct: 805 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 864
Query: 960 ILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRER 1019
+V L R E+ E+ G+ P+ Y +INGL + ++ A + EM
Sbjct: 865 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 924
Query: 1020 GIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGN 1075
I P +AM+ L G +EA + + L P + ++ L+ +GN
Sbjct: 925 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 979
BLAST of Cp4.1LG06g02870 vs. Swiss-Prot
Match:
PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1)
HSP 1 Score: 319.3 bits (817), Expect = 1.6e-85
Identity = 219/815 (26.87%), Postives = 396/815 (48.59%), Query Frame = 1
Query: 178 GFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSETV 237
GF + S+ LIH L+++ A + ++ LKPS ++ L K + S +
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPS-DVFNVLFSCYEKCKLSSSS 158
Query: 238 MVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRM-DEEGCGPDLVTYTVLID 297
++ + I+ R+ ++ + +F+ M + P++ T + L+
Sbjct: 159 -----------------SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 218
Query: 298 ALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMP 357
L A ELF M + G +PD IY ++ + DL KE MEA G
Sbjct: 219 GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 278
Query: 358 DVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLL 417
++V + +L+D LCK + EA + + + P++ TY TL+ GL K E L+++
Sbjct: 279 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 338
Query: 418 DTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAES 477
D M L P+ ++ K G +A+ +++ G+ PN+ NA + SL +
Sbjct: 339 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 398
Query: 478 GRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVV 537
+ EA+ +F+ + + GL P+ VTY++++ + + G++D A++ L EM+ G + V
Sbjct: 399 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 458
Query: 538 NSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIK 597
NSLI+ K G + A M + KL PTVVTY +L+ G +G++ KA+ L+ M
Sbjct: 459 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 518
Query: 598 QRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNY 657
+ +P+ +F TLL + I A+++F++M E + KP+ +TYN +I G +E ++
Sbjct: 519 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 578
Query: 658 AFWFFHQL-KKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLM 717
AF F ++ +K + PD + L+ G+ +G+ +A K+ D +++ +N + L+
Sbjct: 579 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLL 638
Query: 718 GGTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQK-RALYAYQIFENFTTNLE 777
G E ++++A+ +E+V G+ + LI K K R L+ + E L
Sbjct: 639 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL- 698
Query: 778 IKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELF 837
KP Y +I + ++A+ ++ M N C P+ TY +++ K G + E
Sbjct: 699 -KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 758
Query: 838 ELYNEMVSRKCKPNVITYNIVISSLAKSN-NLDKALDFYYDLVSSDFCPTPCTYGPLLDG 897
L ++M PN +TY + L K ++ KA++ + ++ T TY L+ G
Sbjct: 759 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT-ATYNMLIRG 818
Query: 898 LAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPD 957
+ GR+EEA +L M G P+C + +IN + D++ A +L+ M ++GIRPD
Sbjct: 819 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 878
Query: 958 LKSYTILVECLCLAGRVDEALYYFEELKSTGLDPD 989
+Y L+ C+AG + +A E+ GL P+
Sbjct: 879 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
BLAST of Cp4.1LG06g02870 vs. Swiss-Prot
Match:
PP381_ARATH (Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=3 SV=2)
HSP 1 Score: 312.0 bits (798), Expect = 2.6e-83
Identity = 235/905 (25.97%), Postives = 413/905 (45.64%), Query Frame = 1
Query: 148 LSTYLTIFKALSIRGGLRQVTIALKKMRKAGFVLNAYSYNGLIHLLIQSGFCSEALE-VY 207
+S + T+F+ L L M G V ++ +N LIH +G + + +Y
Sbjct: 60 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 119
Query: 208 GRMVSEGLKPSLKTYSALMVALGKK-RDSETVMVLLKEMESLGLRPNVYTYTICIRVLGR 267
+M++ G+ P + + L+ + K R S + +L + S+ + TY I L
Sbjct: 120 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISI----DTVTYNTVISGLCE 179
Query: 268 AGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALCNAGRLESAKELFVKMKANGHKPDQVI 327
G DEAY+ M + G PD V+Y LID C G FV+ KA + ++
Sbjct: 180 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN-------FVRAKALVDEISELN 239
Query: 328 YITLLDKFNDFGDLDTVKEFWGQMEADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMR 387
IT + + +L ++E + M G+ PDVVTF+ +++ LCK E M
Sbjct: 240 LITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME 299
Query: 388 KQGILPNLHTYNTLICGLLKAGRIEDALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTG 447
+ + PN TY TL+ L KA AL L M G+ Y + +D K+GD
Sbjct: 300 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 359
Query: 448 KAVETFEKMKARGIVPNIVACNASLYSLAESGRLREAKNMFNGLRENGLAPDSVTYNMMM 507
+A +TF+ + VPN+V A + L ++G L A+ + + E + P+ VTY+ M+
Sbjct: 360 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 419
Query: 508 KCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLS 567
Y K G +++AV+LL +M P+ ++ID L+KAG+ + A ++ M+ + +
Sbjct: 420 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 479
Query: 568 PTVVTYNTLLSGLGKEGRVQKAIELFESMIKQRCSPNTISFNTLLDCFCKNDEIELALEM 627
+ L++ L + GR+++ L + M+ + + + I++ +L+D F K + E AL
Sbjct: 480 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 539
Query: 628 FSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKS 687
+M E DV++YN +I G++K +V + + +K + PD T ++ K
Sbjct: 540 AEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQ 599
Query: 688 GRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEIDKAIIFAEELVLNGICREDSF 747
G +K+ D + + + ++G ++++AI +++L I +
Sbjct: 600 GDSEGILKL-WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 659
Query: 748 LIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDM 807
+ K KRA ++ E + IK + YN LI L ++ T+KA + DM
Sbjct: 660 YRIFLDTSSKHKRADAIFKTHETL-LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 719
Query: 808 KNAACAPDTFTYNMLLDVHGKLGKIAELFELYNEMVSRKCKPNVITYNIVISSLAKSNNL 867
+ PDT T+N L+ + + + Y+ M+ PNV TYN +I L+ + +
Sbjct: 720 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 779
Query: 868 DKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNIL 927
+ + ++ S P TY L+ G AK G ++ +M ++ EM G P + +N+L
Sbjct: 780 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 839
Query: 928 INGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYTILVECLCLAGRVDEALYYFEELKSTGL 987
I+ + G + A +L K M K G+ P+ +Y ++ LC
Sbjct: 840 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC----------------KLCT 899
Query: 988 DPDFIAYNRIINGLGKSQRMEEALALYSEM-RERGIVPDLHTYNAMLLYLGLAGMVEEAE 1047
PD + +N+ K+ + EA L EM E+G +P T + GM +AE
Sbjct: 900 HPD-VEWNK------KAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAE 928
Query: 1048 RMYEE 1050
R +E
Sbjct: 960 RFLKE 928
BLAST of Cp4.1LG06g02870 vs. TrEMBL
Match:
D7SV48_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06690 PE=4 SV=1)
HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 739/1108 (66.70%), Postives = 901/1108 (81.32%), Query Frame = 1
Query: 3 STCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSM------ANWKKHRKKRKNVC 62
S+CC+ C + + S S +E+LG + L + NWKKHRKK+ VC
Sbjct: 10 SSCCSKFKYGCAVTGTKPSVLS---CNESLGGIKIGNLKVLPSGCRVNWKKHRKKQVGVC 69
Query: 63 RFALQNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETC 122
F +++ + V VK K + +S EE+ R LKS++D +A S+F SV + P V HTTETC
Sbjct: 70 GFVIRSSFDVVV-VKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETC 129
Query: 123 NFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRK 182
N+VLE LR H +VEDM VF MQK+II+R ++TYLTIFK L IRGGLR+ +AL+KMRK
Sbjct: 130 NYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRK 189
Query: 183 AGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSET 242
GFVLN YSY GLIHLL++SGFC EAL+VY RMVSEG+KPSLKTYSALMVALGK+RD ET
Sbjct: 190 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 249
Query: 243 VMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLID 302
VM LL+EMESLGLRPN+YT+TICIR+LGRAGKIDEAY I +RMD+ GCGPD+VTYTVLID
Sbjct: 250 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLID 309
Query: 303 ALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMP 362
ALCNAG+L +AKELF+KMKA+ HKPD+V YITLLDKF+D GDLD +KEFW +MEADGY+P
Sbjct: 310 ALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLP 369
Query: 363 DVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLL 422
DVVTFTIL+D LCK DEAF T DVM+KQG+ PNLHTYNTLICGLL+ R+++AL+L
Sbjct: 370 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF 429
Query: 423 DTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAES 482
++MESLG++ TAYTY++FIDY+GKSG++GKA++TFEKMK GIVPNIVACNASLYSLAE
Sbjct: 430 NSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQ 489
Query: 483 GRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVV 542
GRL EAK FNGL++ GLAPD++TYN++M+CY K G+VDDA+ LL EM +NGC+P+V+++
Sbjct: 490 GRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVII 549
Query: 543 NSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIK 602
NSLID+LYKA RVDEAWKMF RMK+MKL+PTVVTYNTLL+GLGKEGRVQ+A LF+ MI
Sbjct: 550 NSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIA 609
Query: 603 QRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNY 662
C PNTISFNTLLDC CKN E++LAL+M +MTEM+C PDVLTYNTVIYGLIKENRVNY
Sbjct: 610 DDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNY 669
Query: 663 AFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMG 722
AFW FHQ+KK +YPD+VT+CTLLPG++K GRI DA ++AK+F++ V + SFWEDLMG
Sbjct: 670 AFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMG 729
Query: 723 GTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIK 782
G L+EAEI ++I+FAE LV N IC +DS LIPL++ LCK +A+ AY +F T + I
Sbjct: 730 GILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCIT 789
Query: 783 PTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFEL 842
P++ +YN LI LL+ TE AW LF MKNA C PD FTYN+ LD GK GKI ELF+L
Sbjct: 790 PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 849
Query: 843 YNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAK 902
Y EM+ R CKPN IT+NIVI L KSN+LDKA+D YYDL+S DF PTP TYGPL+DGL K
Sbjct: 850 YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 909
Query: 903 AGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKS 962
GRLEEA Q FEEM DYGC PNC ++NIL+NG+GK GD+E A +LF+RMVKEGIRPDLKS
Sbjct: 910 LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 969
Query: 963 YTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMR 1022
Y+I+V+CLC+ G+VD+AL+YFEELK +GLDPD + YN +INGLG+SQR+EEAL+L+ EMR
Sbjct: 970 YSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR 1029
Query: 1023 ERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPE 1082
RGI PDL+TYNA++L LG+AGMVEEA +MYEELQL GLEP+VFTYNALIRG+S+SGNP+
Sbjct: 1030 NRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPD 1089
Query: 1083 HAYTVYKNMMVDGCNPNDGTYAQLPNPS 1105
AY VYK MMV GC PN GT+AQLPN S
Sbjct: 1090 RAYAVYKKMMVGGCRPNTGTFAQLPNQS 1113
BLAST of Cp4.1LG06g02870 vs. TrEMBL
Match:
A0A061GHJ7_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_036900 PE=4 SV=1)
HSP 1 Score: 1528.8 bits (3957), Expect = 0.0e+00
Identity = 741/1108 (66.88%), Postives = 891/1108 (80.42%), Query Frame = 1
Query: 3 STCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLS------MANWKKHRKKRKNVC 62
+ CCN +C + S S S +S G + L M +WKK RK+R
Sbjct: 10 TACCNSLSYSCILADSKVSAFSHKYVS--FGGRKNGNLEVWPYGCMVSWKKRRKQRLGF- 69
Query: 63 RFALQNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETC 122
+ ++N + VA K K +S EE+LR LKS TDT ALSYF SV + P V HTTETC
Sbjct: 70 -YVMKNSCQMVVA-NGKCKNSLSSEEVLRVLKSFTDTKSALSYFKSVAELPNVVHTTETC 129
Query: 123 NFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRK 182
N +LE LR H V M+ VFEFMQK+II+RDL+TYLT+FK L IRGGLRQ L++MR
Sbjct: 130 NHMLEVLRAHRMVGAMSFVFEFMQKQIIKRDLNTYLTVFKGLDIRGGLRQAPFGLERMRN 189
Query: 183 AGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSET 242
AGFVLNAYSYNGLIHLL+QSGF EALEVY RMVSEGLKPSLKTYSALMVA GK+RD T
Sbjct: 190 AGFVLNAYSYNGLIHLLLQSGFSREALEVYRRMVSEGLKPSLKTYSALMVASGKRRDIGT 249
Query: 243 VMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLID 302
VM LL+EME+LGL+PN+YT+TICIRVLGRAGKI+EA+ I +RMD+ GCGPD+VTYTVLID
Sbjct: 250 VMDLLEEMETLGLKPNIYTFTICIRVLGRAGKINEAFGILKRMDDLGCGPDVVTYTVLID 309
Query: 303 ALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMP 362
ALCN GRL+ AKE+F+KMKA+ HKPD++ YITLLDKF+ GD+D VKEFW +MEADGY P
Sbjct: 310 ALCNTGRLDQAKEIFLKMKASSHKPDRITYITLLDKFSGCGDIDLVKEFWNEMEADGYAP 369
Query: 363 DVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLL 422
DVVTFTIL++ CK + DEAF +VMR QGILPNLHTYNTLICGLL+ R+++A +L
Sbjct: 370 DVVTFTILIEAFCKVGNLDEAFDMLEVMRNQGILPNLHTYNTLICGLLRVNRVDEAFELF 429
Query: 423 DTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAES 482
+ESLG++PTAYTY++FI+Y+GKSGD GKA+ETFEKMKARGIVPN++ACNASLYSLAE+
Sbjct: 430 TNLESLGIKPTAYTYILFINYYGKSGDHGKALETFEKMKARGIVPNVIACNASLYSLAEA 489
Query: 483 GRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVV 542
GRL EAK +FNGL+ +GLAPDSVTYNMMMKC+SKVGQ+D+A+ LL EM+++ C+PDVI++
Sbjct: 490 GRLGEAKAIFNGLKSSGLAPDSVTYNMMMKCFSKVGQIDEAIKLLSEMLEDQCDPDVIII 549
Query: 543 NSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIK 602
NSLID L+KAGR DEAW+MF RMKDMKL+P+VVTYNTL+SGLGKEG+VQKAIELF SM +
Sbjct: 550 NSLIDMLFKAGRADEAWEMFYRMKDMKLAPSVVTYNTLISGLGKEGQVQKAIELFGSMTR 609
Query: 603 QRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNY 662
CSPNTI+FNTLLDC CKNDE+ LAL+M KM +C PDV TYNTVIYG IKENRV
Sbjct: 610 HGCSPNTITFNTLLDCLCKNDEVVLALKMLYKMMTRNCSPDVRTYNTVIYGFIKENRVKD 669
Query: 663 AFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMG 722
A W FHQ+KK +YPD+VT+CTLLPG+VK G+I DA KIA+DF+ Q +RSFWEDLMG
Sbjct: 670 AIWVFHQMKKVLYPDYVTLCTLLPGVVKDGQIMDAFKIAQDFVYQDGIDTDRSFWEDLMG 729
Query: 723 GTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIK 782
G L+EA +DKA++FAE L N IC++DS L+PLIR LC+ K+A+ A +F FT N+ +
Sbjct: 730 GILMEAGMDKAVLFAETLASNKICKDDSILVPLIRSLCRHKKAVLARDLFAKFTKNMGVI 789
Query: 783 PTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFEL 842
PT +YN LI LLEV TE AWDLF++MKN C+PD TYN+LLD GK G I +LFE+
Sbjct: 790 PTPGAYNLLIDGLLEVVITEMAWDLFEEMKNIGCSPDVSTYNLLLDACGKSGSINKLFEV 849
Query: 843 YNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAK 902
Y EM+ CKPN IT NIV+S L KSNN+DKA++ YYDL+S DF PTPCTYGPL+DGL K
Sbjct: 850 YEEMICHGCKPNTITQNIVLSGLVKSNNIDKAMNMYYDLISGDFSPTPCTYGPLIDGLLK 909
Query: 903 AGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKS 962
GRLEEA QLFEEM DYGCK NCAI+NIL+NGYGKTGD++ A +LFKRMVKEGIRPDLKS
Sbjct: 910 LGRLEEAKQLFEEMVDYGCKANCAIYNILMNGYGKTGDVDAACELFKRMVKEGIRPDLKS 969
Query: 963 YTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMR 1022
YTILV+CLCL GRVD+A++YFEELK TGLDPD ++YN +INGLG+S R+EEAL+L+ EM
Sbjct: 970 YTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNLMINGLGRSGRVEEALSLFDEMW 1029
Query: 1023 ERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPE 1082
RGI PDL+TYN+++L LG GMVE+A + YEELQL GLEP+V+TYNALIRGYSVSGNP+
Sbjct: 1030 SRGISPDLYTYNSLILNLGTVGMVEQAGKFYEELQLMGLEPNVYTYNALIRGYSVSGNPD 1089
Query: 1083 HAYTVYKNMMVDGCNPNDGTYAQLPNPS 1105
HAY VYK MMV GC+PN GT+AQLPN S
Sbjct: 1090 HAYAVYKQMMVGGCSPNRGTFAQLPNQS 1112
BLAST of Cp4.1LG06g02870 vs. TrEMBL
Match:
W9REB9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013194 PE=4 SV=1)
HSP 1 Score: 1515.7 bits (3923), Expect = 0.0e+00
Identity = 733/1094 (67.00%), Postives = 889/1094 (81.26%), Query Frame = 1
Query: 9 AFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFALQNPEEATV 68
AF+ ++ A + S +S+G I N+ + L KK R+KR + F ++ P+E
Sbjct: 11 AFTESRVSALNFS-NSKGRIFGNVKVWACGYL--VKQKKLRRKRVGLSGFVMKIPDEG-- 70
Query: 69 AVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFVLEFLRVHEK 128
E+T + S EE+ R LKS+ D A SYF SV P V HTT+TCN++LE LR + +
Sbjct: 71 ---ERTVLVRSAEEVARVLKSILDPNCAFSYFMSVARLPKVVHTTDTCNYMLELLRTNGR 130
Query: 129 VEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFVLNAYSYNG 188
VEDMA VF+FMQK++I R+L+TYLTIFK L IR G+RQ IAL+KM +AGFVLNAYSYNG
Sbjct: 131 VEDMAVVFDFMQKQLINRNLNTYLTIFKGLYIRVGIRQAPIALEKMSRAGFVLNAYSYNG 190
Query: 189 LIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSETVMVLLKEMESLG 248
LI+L++Q+G EAL VY RMVSEG KPSLKTYSALMVA GK+RD+ETVM LL+EME LG
Sbjct: 191 LIYLILQTGSFREALVVYKRMVSEGFKPSLKTYSALMVAFGKRRDTETVMGLLQEMEDLG 250
Query: 249 LRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALCNAGRLESAK 308
LRPN+YT+TICIRVLGRAGKIDEAY I +RMD+EGCGPD++TYTVLIDALCNAG+L++A+
Sbjct: 251 LRPNIYTFTICIRVLGRAGKIDEAYGILKRMDDEGCGPDVITYTVLIDALCNAGKLDNAR 310
Query: 309 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMPDVVTFTILVDTL 368
LFVKMKA+ HKPDQV YITLLDK +D GDL+ VKE W +MEADGY PDVVTFTIL+D L
Sbjct: 311 ALFVKMKASSHKPDQVTYITLLDKLSDCGDLEGVKEIWAEMEADGYAPDVVTFTILIDAL 370
Query: 369 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLLDTMESLGVQPTA 428
CKA +F++AF T ++M+++G+ PNLH+YNTLICGLL+A R+++ALKL ME+LGV PTA
Sbjct: 371 CKAGNFEKAFDTLNIMKEKGVSPNLHSYNTLICGLLRASRLDEALKLFRNMEALGVMPTA 430
Query: 429 YTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAESGRLREAKNMFNG 488
YTY++FIDY+GKSGD+ KA+ETFEKMK RGIVPNIVACNASLYSL E GRL+EAK +F+G
Sbjct: 431 YTYILFIDYYGKSGDSSKAIETFEKMKRRGIVPNIVACNASLYSLTEMGRLQEAKEIFDG 490
Query: 489 LRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSLIDSLYKAGR 548
++ NGLAPDSVTYN+MM+CYSKVG+VD+A+ LL EM+K GCEPD I+VN+LID LYKA R
Sbjct: 491 IKSNGLAPDSVTYNLMMRCYSKVGRVDEAIKLLSEMVKQGCEPDAIIVNTLIDMLYKAER 550
Query: 549 VDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIKQRCSPNTISFNT 608
VDEAW+MF MK MKL+PTVVT+NTLL+ L KEG+V+KAIE+FESM C PNT++FNT
Sbjct: 551 VDEAWQMFYGMKGMKLTPTVVTFNTLLASLRKEGQVRKAIEVFESMEDYGCPPNTVTFNT 610
Query: 609 LLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFWFFHQLKKSM 668
+LDC CKNDE+ LALE+ KM+ M+C PDV TYNT+IYGLI+ENRVNYAFWFFHQ+KKS+
Sbjct: 611 ILDCLCKNDEVGLALELLCKMSTMNCSPDVFTYNTIIYGLIRENRVNYAFWFFHQMKKSL 670
Query: 669 YPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEIDKAI 728
+PD VT+ TL+PG+VK GRI DA +I K F Q +N FWEDLMGG LV+AE D+AI
Sbjct: 671 FPDRVTLFTLIPGVVKDGRIEDAFRIVKSFAYQAGVHINGPFWEDLMGGILVKAEADRAI 730
Query: 729 IFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVASYNCLIGE 788
FAE+LV + IC +DS L+PLIR LCK K+ + A +F FT IKPT+ +YNCLI
Sbjct: 731 SFAEKLVSDKICLDDSILLPLIRALCKGKKTVDANHLFAKFTRTFGIKPTLETYNCLIEG 790
Query: 789 LLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFELYNEMVSRKCKPN 848
LL VH EKAWDLF +MK CAPD FTYN+LL H K G+I ELF LY EM+SR CKPN
Sbjct: 791 LLRVHANEKAWDLFNEMKRVGCAPDDFTYNLLLAAHCKFGEITELFGLYEEMISRGCKPN 850
Query: 849 VITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAGRLEEAMQLFE 908
ITYNIVISSL KS+N+DKA+DFYYDLVS DF P+PCTYGPL+DGL K+ R EEAM+ FE
Sbjct: 851 TITYNIVISSLVKSDNVDKAIDFYYDLVSGDFSPSPCTYGPLIDGLLKSRRQEEAMRFFE 910
Query: 909 EMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYTILVECLCLAG 968
EM DYGCKPNCAIFNILING+GK GD+E A LFKRMVKEGIRPDLKSYTILV+CLCLAG
Sbjct: 911 EMGDYGCKPNCAIFNILINGFGKAGDVETACMLFKRMVKEGIRPDLKSYTILVDCLCLAG 970
Query: 969 RVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRERGIVPDLHTYN 1028
R+D+AL+YFEELK +GL+PD ++YN +IN LG+S+R+EEAL+LY EMR R I PDL+TYN
Sbjct: 971 RIDDALHYFEELKLSGLNPDSVSYNLMINALGRSRRVEEALSLYDEMRSRRITPDLYTYN 1030
Query: 1029 AMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPEHAYTVYKNMMVD 1088
+++L LG+AGMVE+A MYEELQL GLEPDVFTYNALIR YS SGNP+HAY VYK MM+
Sbjct: 1031 SLILNLGIAGMVEQAGSMYEELQLRGLEPDVFTYNALIRAYSASGNPDHAYAVYKKMMIG 1090
Query: 1089 GCNPNDGTYAQLPN 1103
GC+PN T+AQLPN
Sbjct: 1091 GCSPNVSTFAQLPN 1096
BLAST of Cp4.1LG06g02870 vs. TrEMBL
Match:
B9HB63_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s28060g PE=4 SV=2)
HSP 1 Score: 1493.4 bits (3865), Expect = 0.0e+00
Identity = 730/1108 (65.88%), Postives = 885/1108 (79.87%), Query Frame = 1
Query: 3 STCCNG-----AFSNCQIYASSCSGSSRGLISENLGDFRTATL-SMANWKKHRKKRKNVC 62
S CC+ AFS Q S + L E G R S NWKK+ KK+ C
Sbjct: 10 SMCCSCIDYSIAFSE-QNRLSDFRHKNGSLGGEKFGTLRVFPFGSNVNWKKNNKKQVAFC 69
Query: 63 RFALQNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETC 122
FAL++ E V V K + S +E+L L S++D AL YF SV + P V HTTETC
Sbjct: 70 GFALKSQNEELV-VNGKPRKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETC 129
Query: 123 NFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRK 182
N +LE LRVH +VEDMA VF+ MQ+ IIRR++ TYL IFK+L IRGGLRQ AL+KMR+
Sbjct: 130 NHMLEILRVHRRVEDMAFVFDLMQRHIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMRE 189
Query: 183 AGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSET 242
AGFVLNAYSYNGLIH L+QSGFC EALEVY RMVSEGLKPSLKT+SALMVA GK+R+ +T
Sbjct: 190 AGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKT 249
Query: 243 VMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLID 302
VM LL+EMES+GLRPN+YTYTICIRVLGR GKIDEAY I +RMD++GCGPD+VTYTVLID
Sbjct: 250 VMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLID 309
Query: 303 ALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMP 362
ALC A +L+ A LF KMK++ HKPD+V Y+TLLDKF+D G LD V++ W +MEADGY P
Sbjct: 310 ALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAP 369
Query: 363 DVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLL 422
DVVTFTILV+ LCKA +EAF D MRKQG+LPNLHTYNTLI GLL+A R++DAL L
Sbjct: 370 DVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF 429
Query: 423 DTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAES 482
MESLGV+PTAYTY++ IDY GKSG GKA+ETFEKMKARGI PNIVACNASLYSLAE
Sbjct: 430 SNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEM 489
Query: 483 GRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVV 542
GRL EAK MFN L+ +GLAPDSVTYNMMMKCYSKVGQVD+A+ LL EM K CEPDVIV+
Sbjct: 490 GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVI 549
Query: 543 NSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIK 602
NSLID+LYKAGRV+EAW+MF RM++M L+PTVVTYN LL+GLGKEG++QKA++LFESM
Sbjct: 550 NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 609
Query: 603 QRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNY 662
CSPNTI+FNTLLDC CKNDE++LAL+MF KMT M+C+PDVLT+NT+I+G IK+N++
Sbjct: 610 HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 669
Query: 663 AFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMG 722
A W FHQ+KK + PDHVT+CTLLPG++KSG+I DA +I +DF QV ++RSFWED+MG
Sbjct: 670 AIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMG 729
Query: 723 GTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIK 782
G L EA +KAI+F E LV IC++DS LIP+I+VLCK K+ A +F FT L +K
Sbjct: 730 GILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVK 789
Query: 783 PTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFEL 842
PT+ YN LI LEVH E AW+LF++MK+A CAPDTFTYN L+D HGK GKI ELF+L
Sbjct: 790 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 849
Query: 843 YNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAK 902
Y+EM++R CKPN ITYN+VIS+L KSN LDKA+D YY+LVS DF PTPCT+GPL+DGL K
Sbjct: 850 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 909
Query: 903 AGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKS 962
+GRL++A ++F+ M YGC+PN AI+NIL+NGYGK G ++ A + FKRMVKEGIRPDLKS
Sbjct: 910 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKS 969
Query: 963 YTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMR 1022
YTILV+ LC+AGRVD+AL+YFE+LK GLDPD +AYN +INGLG+SQR EEAL+L+ EM+
Sbjct: 970 YTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQ 1029
Query: 1023 ERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPE 1082
RGIVPDL+TYN+++L LG+ GM+EEA ++YEELQ GL+P+VFTYNALIRGY++SGN E
Sbjct: 1030 NRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSE 1089
Query: 1083 HAYTVYKNMMVDGCNPNDGTYAQLPNPS 1105
AY +YK MMV GC+PN GT+AQLPN S
Sbjct: 1090 LAYGIYKKMMVGGCDPNTGTFAQLPNQS 1115
BLAST of Cp4.1LG06g02870 vs. TrEMBL
Match:
A0A0D2QA82_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G063400 PE=4 SV=1)
HSP 1 Score: 1491.9 bits (3861), Expect = 0.0e+00
Identity = 723/1112 (65.02%), Postives = 881/1112 (79.23%), Query Frame = 1
Query: 3 STCCNGAFSNCQIYASSCSGSSRGLIS---ENLGDFRTATLS-MANWKKHRKKR------ 62
S CCN +C + S S S +S +G F+ M +WKK RK++
Sbjct: 10 SACCNSLNYSCVLVDSKVSAFSHKNVSFGGRKIGKFKVFPDGYMVSWKKRRKQQLRFYVM 69
Query: 63 KNVCRFALQNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHT 122
KN C L N K + +S E+ R LKS++D A SYF SV + P V HT
Sbjct: 70 KNSCEMVLANG---------KCRNSLSSNEVSRVLKSISDPKSAFSYFESVAELPNVVHT 129
Query: 123 TETCNFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALK 182
TETCN +LE LRVH V +M VFEFMQK+IIRRDL+TYLT+FK L IRGGLRQ L+
Sbjct: 130 TETCNHMLEVLRVHRMVGEMRFVFEFMQKQIIRRDLNTYLTVFKGLDIRGGLRQAPFGLE 189
Query: 183 KMRKAGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKR 242
+MR AG VLNAYSYNGLIHLL+QSG EAL++Y RMVSEGLKPSLKTYSALMVA GK+R
Sbjct: 190 RMRDAGIVLNAYSYNGLIHLLLQSGLVREALQIYRRMVSEGLKPSLKTYSALMVASGKRR 249
Query: 243 DSETVMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYT 302
D TVM LL+EMESLGL+PNVYT+TICIRVLGRAGKIDEA+ I +RMD+ GCGPD+VTYT
Sbjct: 250 DIGTVMDLLEEMESLGLKPNVYTFTICIRVLGRAGKIDEAFGILKRMDDLGCGPDVVTYT 309
Query: 303 VLIDALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEAD 362
VLIDALCN GRL AKE+F+KMKA+ HKPD+V YITLLDKF+D GD+D VKEFW +M+AD
Sbjct: 310 VLIDALCNTGRLGQAKEIFLKMKASSHKPDRVTYITLLDKFSDSGDVDLVKEFWNEMKAD 369
Query: 363 GYMPDVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDA 422
GY PDVVT TIL+D CK + DEAF +VMR+QG+ PNLHTYNTLICGLL+ R+ +A
Sbjct: 370 GYAPDVVTCTILIDAFCKVGNLDEAFDMLEVMREQGVSPNLHTYNTLICGLLRLNRVGEA 429
Query: 423 LKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYS 482
L+L +ESLG++PTA+TY++FI+Y+GKSGD G+A++TF+KMKARGIVPN++ACNASLYS
Sbjct: 430 LELFTNLESLGIKPTAFTYILFINYYGKSGDHGEALKTFKKMKARGIVPNVIACNASLYS 489
Query: 483 LAESGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPD 542
LA++GRL EAK +FN L+ +GLAPDSVTYNMM+KCYSKVGQVDDA+ LL EM++N CEPD
Sbjct: 490 LAQAGRLSEAKAIFNELKSSGLAPDSVTYNMMVKCYSKVGQVDDAIKLLSEMLENQCEPD 549
Query: 543 VIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 602
V+++NSLID L+KAGRVDEAW MF +MK+M L P+VVTYNTL+SGLGKEG+V+KAIELFE
Sbjct: 550 VMIINSLIDMLFKAGRVDEAWVMFHKMKEMALVPSVVTYNTLISGLGKEGQVKKAIELFE 609
Query: 603 SMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKEN 662
SM + C PNTI+FN LLDC CKNDE++LAL+M KMT +C PDVLTYNT+IYG IK N
Sbjct: 610 SMTRHGCRPNTITFNILLDCLCKNDEVDLALKMLYKMTPGNCAPDVLTYNTIIYGFIKAN 669
Query: 663 RVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWE 722
RV A W FHQ+KK +YPD+VT+CTLLPG+VK G++ DA KIA+DFI+Q N SFWE
Sbjct: 670 RVKDAIWVFHQMKKLLYPDYVTLCTLLPGVVKDGQLMDAFKIAQDFIHQDGIDTNGSFWE 729
Query: 723 DLMGGTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTN 782
DLM G L EA +DKA+ FAE L N IC+++S L+PLIR LC+ K+A++A ++F NFT N
Sbjct: 730 DLMSGILTEAGMDKAVRFAETLASNKICKDESILLPLIRNLCRHKKAVFARELFANFTKN 789
Query: 783 LEIKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAE 842
+ + T +YN LI LL+VH TE AW+LF++MK+ C+PD TYN+L+D GK G+ +
Sbjct: 790 MGVIATPTAYNLLIDGLLDVHITEMAWELFEEMKSIGCSPDISTYNLLIDACGKSGQTDK 849
Query: 843 LFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLD 902
LFE+Y EM R CKPN IT+NIV+S LAKSNN++KA++ YYDL+S DF PTPCTYGPL+D
Sbjct: 850 LFEVYEEMTFRGCKPNTITHNIVLSGLAKSNNIEKAMNMYYDLISGDFRPTPCTYGPLID 909
Query: 903 GLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRP 962
GL K GRLE+A QLFEEM +YGCK NCAI+NIL+NGYGK GD++ A LFKRM KEGIRP
Sbjct: 910 GLLKLGRLEDAKQLFEEMEEYGCKANCAIYNILVNGYGKAGDVDTACDLFKRMAKEGIRP 969
Query: 963 DLKSYTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1022
DLKSYTILV+CLCL GRVD+AL+YFEE+K TGLDPD ++YN ++NGLGKS R+EEAL+L+
Sbjct: 970 DLKSYTILVDCLCLVGRVDDALHYFEEMKLTGLDPDLVSYNLMLNGLGKSGRIEEALSLF 1029
Query: 1023 SEMRERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVS 1082
EMR RGI PDL+TYN+++L LG GMVE+A + YEELQL GLEP+VFTYNALIRGYSVS
Sbjct: 1030 DEMRNRGITPDLYTYNSLILNLGTVGMVEQAGKFYEELQLMGLEPNVFTYNALIRGYSVS 1089
Query: 1083 GNPEHAYTVYKNMMVDGCNPNDGTYAQLPNPS 1105
GN +HAY VYK MMV GC+PN GT AQLPN S
Sbjct: 1090 GNSDHAYAVYKQMMVGGCSPNRGTIAQLPNQS 1112
BLAST of Cp4.1LG06g02870 vs. TAIR10
Match:
AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)
HSP 1 Score: 1411.0 bits (3651), Expect = 0.0e+00
Identity = 684/1075 (63.63%), Postives = 850/1075 (79.07%), Query Frame = 1
Query: 33 GDFRTATLSMANWKKHRKKRKNVCRFALQNPEEATVAVKEKTKIP--VSEEEILRALKSM 92
G + L + + KKH +++ C + + ++ K+ P S EE+ R LKS
Sbjct: 36 GGLKFHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSF 95
Query: 93 TDTTRALSYFYSVPDFPCVQHTTETCNFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLST 152
DT + SYF SV + HTTETCN++LE LRV K+E+MA VF+ MQK+II+RD +T
Sbjct: 96 PDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNT 155
Query: 153 YLTIFKALSIRGGLRQVTIALKKMRKAGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMV 212
YLTIFK+LS++GGL+Q AL+KMR+ GFVLNAYSYNGLIHLL++S FC+EA+EVY RM+
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 213 SEGLKPSLKTYSALMVALGKKRDSETVMVLLKEMESLGLRPNVYTYTICIRVLGRAGKID 272
EG +PSL+TYS+LMV LGK+RD ++VM LLKEME+LGL+PNVYT+TICIRVLGRAGKI+
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 273 EAYEIFRRMDEEGCGPDLVTYTVLIDALCNAGRLESAKELFVKMKANGHKPDQVIYITLL 332
EAYEI +RMD+EGCGPD+VTYTVLIDALC A +L+ AKE+F KMK HKPD+V YITLL
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 333 DKFNDFGDLDTVKEFWGQMEADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMRKQGIL 392
D+F+D DLD+VK+FW +ME DG++PDVVTFTILVD LCKA +F EAF T DVMR QGIL
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 393 PNLHTYNTLICGLLKAGRIEDALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVET 452
PNLHTYNTLICGLL+ R++DAL+L MESLGV+PTAYTY++FIDY+GKSGD+ A+ET
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 453 FEKMKARGIVPNIVACNASLYSLAESGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSK 512
FEKMK +GI PNIVACNASLYSLA++GR REAK +F GL++ GL PDSVTYNMMMKCYSK
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 513 VGQVDDAVNLLFEMIKNGCEPDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVT 572
VG++D+A+ LL EM++NGCEPDVIVVNSLI++LYKA RVDEAWKMF RMK+MKL PTVVT
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 573 YNTLLSGLGKEGRVQKAIELFESMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMT 632
YNTLL+GLGK G++Q+AIELFE M+++ C PNTI+FNTL DC CKNDE+ LAL+M KM
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 633 EMDCKPDVLTYNTVIYGLIKENRVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGD 692
+M C PDV TYNT+I+GL+K +V A FFHQ+KK +YPD VT+CTLLPG+VK+ I D
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 693 AIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEIDKAIIFAEELVLNGICRE-DSFLIPL 752
A KI +F+ + FWEDL+G L EA ID A+ F+E LV NGICR+ DS L+P+
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 753 IRVLCKQKRALYAYQIFENFTTNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAA 812
IR CK A +FE FT +L ++P + +YN LIG LLE E A D+F +K+
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 813 CAPDTFTYNMLLDVHGKLGKIAELFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKAL 872
C PD TYN LLD +GK GKI ELFELY EM + +C+ N IT+NIVIS L K+ N+D AL
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 873 DFYYDLVSS-DFCPTPCTYGPLLDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILING 932
D YYDL+S DF PT CTYGPL+DGL+K+GRL EA QLFE M DYGC+PNCAI+NILING
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 933 YGKTGDIEIAHQLFKRMVKEGIRPDLKSYTILVECLCLAGRVDEALYYFEELKSTGLDPD 992
+GK G+ + A LFKRMVKEG+RPDLK+Y++LV+CLC+ GRVDE L+YF+ELK +GL+PD
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 993 FIAYNRIINGLGKSQRMEEALALYSEMR-ERGIVPDLHTYNAMLLYLGLAGMVEEAERMY 1052
+ YN IINGLGKS R+EEAL L++EM+ RGI PDL+TYN+++L LG+AGMVEEA ++Y
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 1053 EELQLAGLEPDVFTYNALIRGYSVSGNPEHAYTVYKNMMVDGCNPNDGTYAQLPN 1103
E+Q AGLEP+VFT+NALIRGYS+SG PEHAY VY+ M+ G +PN GTY QLPN
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
BLAST of Cp4.1LG06g02870 vs. TAIR10
Match:
AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 347.8 bits (891), Expect = 2.4e-95
Identity = 205/719 (28.51%), Postives = 348/719 (48.40%), Query Frame = 1
Query: 338 DLDTVKEFWGQMEADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYN 397
+ D + + G+M G+ P V T +V KA E + +MRK P Y
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172
Query: 398 TLICGLLKAGRIEDALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKAR 457
TLI + L L M+ LG +PT + + I F K G A+ ++MK+
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232
Query: 458 GIVPNIVACNASLYSLAESGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDA 517
+ +IV N + S + G++ A F+ + NGL PD VTY M+ K ++D+A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 518 VNLLFEMIKNGCEPDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSG 577
V + + KN P N++I AG+ DEA+ + +R + P+V+ YN +L+
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 578 LGKEGRVQKAIELFESMIKQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPD 637
L K G+V +A+++FE M K+ +PN ++N L+D C+ +++ A E+ M + P+
Sbjct: 353 LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 412
Query: 638 VLTYNTVIYGLIKENRVNYAFWFFHQLK-KSMYPDHVTICTLLPGIVKSGRIGDAIKIAK 697
V T N ++ L K +++ A F ++ K PD +T C+L+ G+ K GR+ DA K+ +
Sbjct: 413 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 472
Query: 698 DFINQVQFRVNRSFWEDLMGGTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQ 757
++ R N + L+ + ++++ + L + + K
Sbjct: 473 KMLDS-DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 532
Query: 758 KRALYAYQIFENFTTNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFT 817
+FE P SY+ LI L++ + + ++LF MK C DT
Sbjct: 533 GEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 592
Query: 818 YNMLLDVHGKLGKIAELFELYNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLV 877
YN+++D K GK+ + ++L EM ++ +P V+TY VI LAK + LD+A + +
Sbjct: 593 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 652
Query: 878 SSDFCPTPCTYGPLLDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIE 937
S Y L+DG K GR++EA + EE+ G PN +N L++ K +I
Sbjct: 653 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 712
Query: 938 IAHQLFKRMVKEGIRPDLKSYTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRII 997
A F+ M + P+ +Y IL+ LC + ++A +++E++ G+ P I+Y +I
Sbjct: 713 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 772
Query: 998 NGLGKSQRMEEALALYSEMRERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGL 1056
+GL K+ + EA AL+ + G VPD YNAM+ L +A ++EE + GL
Sbjct: 773 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
BLAST of Cp4.1LG06g02870 vs. TAIR10
Match:
AT5G55840.1 (AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 337.0 bits (863), Expect = 4.3e-92
Identity = 219/836 (26.20%), Postives = 390/836 (46.65%), Query Frame = 1
Query: 240 LLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALC 299
+ + M G P+VYT + + ++G+ + + M + PD+ T+ +LI+ LC
Sbjct: 185 IFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLC 244
Query: 300 NAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMPDVV 359
G E + L KM+ +G+ P V Y T+L + G E M++ G DV
Sbjct: 245 AEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVC 304
Query: 360 TFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLLDTM 419
T+ +L+ LC++ + + MRK+ I PN TYNTLI G G++ A +LL+ M
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364
Query: 420 ESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAESGRL 479
S G+ P T+ ID G+ +A++ F M+A+G+ P+ V+ L L ++
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 480 REAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSL 539
A+ + ++ NG+ +TY M+ K G +D+AV LL EM K+G +PD++ ++L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 540 IDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIKQRC 599
I+ K GR A ++ R+ + LSP + Y+TL+ + G +++AI ++E+MI +
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 600 SPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFW 659
+ + +FN L+ CK ++ A E MT P+ ++++ +I G AF
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 660 FFHQLKK-SMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGT 719
F ++ K +P T +LL G+ K G + +A K K ++ V V+ + L+
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-LHAVPAAVDTVMYNTLLTAM 664
Query: 720 LVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPT 779
+ KA+ E+V I + LI LC++ + + A + + P
Sbjct: 665 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 724
Query: 780 VASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFELYN 839
Y C + + + + + M N PD T N ++D + ++GKI + +L
Sbjct: 725 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 784
Query: 840 EMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAG 899
EM ++ PN+ TYNI++ +K ++ + Y ++ + P T L+ G+ ++
Sbjct: 785 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 844
Query: 900 RLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYT 959
LE +++ + G + + FN+LI+ G+I A L K M GI D +
Sbjct: 845 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 904
Query: 960 ILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRER 1019
+V L R E+ E+ G+ P+ Y +INGL + ++ A + EM
Sbjct: 905 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 964
Query: 1020 GIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGN 1075
I P +AM+ L G +EA + + L P + ++ L+ +GN
Sbjct: 965 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 1019
BLAST of Cp4.1LG06g02870 vs. TAIR10
Match:
AT5G59900.1 (AT5G59900.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 319.3 bits (817), Expect = 9.2e-87
Identity = 219/815 (26.87%), Postives = 396/815 (48.59%), Query Frame = 1
Query: 178 GFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSETV 237
GF + S+ LIH L+++ A + ++ LKPS ++ L K + S +
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPS-DVFNVLFSCYEKCKLSSSS 158
Query: 238 MVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRM-DEEGCGPDLVTYTVLID 297
++ + I+ R+ ++ + +F+ M + P++ T + L+
Sbjct: 159 -----------------SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 218
Query: 298 ALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMP 357
L A ELF M + G +PD IY ++ + DL KE MEA G
Sbjct: 219 GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 278
Query: 358 DVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLL 417
++V + +L+D LCK + EA + + + P++ TY TL+ GL K E L+++
Sbjct: 279 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 338
Query: 418 DTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAES 477
D M L P+ ++ K G +A+ +++ G+ PN+ NA + SL +
Sbjct: 339 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 398
Query: 478 GRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVV 537
+ EA+ +F+ + + GL P+ VTY++++ + + G++D A++ L EM+ G + V
Sbjct: 399 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 458
Query: 538 NSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIK 597
NSLI+ K G + A M + KL PTVVTY +L+ G +G++ KA+ L+ M
Sbjct: 459 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 518
Query: 598 QRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNY 657
+ +P+ +F TLL + I A+++F++M E + KP+ +TYN +I G +E ++
Sbjct: 519 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 578
Query: 658 AFWFFHQL-KKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLM 717
AF F ++ +K + PD + L+ G+ +G+ +A K+ D +++ +N + L+
Sbjct: 579 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLL 638
Query: 718 GGTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQK-RALYAYQIFENFTTNLE 777
G E ++++A+ +E+V G+ + LI K K R L+ + E L
Sbjct: 639 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL- 698
Query: 778 IKPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELF 837
KP Y +I + ++A+ ++ M N C P+ TY +++ K G + E
Sbjct: 699 -KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 758
Query: 838 ELYNEMVSRKCKPNVITYNIVISSLAKSN-NLDKALDFYYDLVSSDFCPTPCTYGPLLDG 897
L ++M PN +TY + L K ++ KA++ + ++ T TY L+ G
Sbjct: 759 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT-ATYNMLIRG 818
Query: 898 LAKAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPD 957
+ GR+EEA +L M G P+C + +IN + D++ A +L+ M ++GIRPD
Sbjct: 819 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 878
Query: 958 LKSYTILVECLCLAGRVDEALYYFEELKSTGLDPD 989
+Y L+ C+AG + +A E+ GL P+
Sbjct: 879 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
BLAST of Cp4.1LG06g02870 vs. TAIR10
Match:
AT5G14770.1 (AT5G14770.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 312.0 bits (798), Expect = 1.5e-84
Identity = 235/905 (25.97%), Postives = 413/905 (45.64%), Query Frame = 1
Query: 148 LSTYLTIFKALSIRGGLRQVTIALKKMRKAGFVLNAYSYNGLIHLLIQSGFCSEALE-VY 207
+S + T+F+ L L M G V ++ +N LIH +G + + +Y
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 208 GRMVSEGLKPSLKTYSALMVALGKK-RDSETVMVLLKEMESLGLRPNVYTYTICIRVLGR 267
+M++ G+ P + + L+ + K R S + +L + S+ + TY I L
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISI----DTVTYNTVISGLCE 177
Query: 268 AGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALCNAGRLESAKELFVKMKANGHKPDQVI 327
G DEAY+ M + G PD V+Y LID C G FV+ KA + ++
Sbjct: 178 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN-------FVRAKALVDEISELN 237
Query: 328 YITLLDKFNDFGDLDTVKEFWGQMEADGYMPDVVTFTILVDTLCKARDFDEAFATFDVMR 387
IT + + +L ++E + M G+ PDVVTF+ +++ LCK E M
Sbjct: 238 LITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME 297
Query: 388 KQGILPNLHTYNTLICGLLKAGRIEDALKLLDTMESLGVQPTAYTYVIFIDYFGKSGDTG 447
+ + PN TY TL+ L KA AL L M G+ Y + +D K+GD
Sbjct: 298 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 357
Query: 448 KAVETFEKMKARGIVPNIVACNASLYSLAESGRLREAKNMFNGLRENGLAPDSVTYNMMM 507
+A +TF+ + VPN+V A + L ++G L A+ + + E + P+ VTY+ M+
Sbjct: 358 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 417
Query: 508 KCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSLIDSLYKAGRVDEAWKMFDRMKDMKLS 567
Y K G +++AV+LL +M P+ ++ID L+KAG+ + A ++ M+ + +
Sbjct: 418 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 477
Query: 568 PTVVTYNTLLSGLGKEGRVQKAIELFESMIKQRCSPNTISFNTLLDCFCKNDEIELALEM 627
+ L++ L + GR+++ L + M+ + + + I++ +L+D F K + E AL
Sbjct: 478 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 537
Query: 628 FSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFWFFHQLKKSMYPDHVTICTLLPGIVKS 687
+M E DV++YN +I G++K +V + + +K + PD T ++ K
Sbjct: 538 AEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQ 597
Query: 688 GRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLVEAEIDKAIIFAEELVLNGICREDSF 747
G +K+ D + + + ++G ++++AI +++L I +
Sbjct: 598 GDSEGILKL-WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 657
Query: 748 LIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVASYNCLIGELLEVHYTEKAWDLFQDM 807
+ K KRA ++ E + IK + YN LI L ++ T+KA + DM
Sbjct: 658 YRIFLDTSSKHKRADAIFKTHETL-LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 717
Query: 808 KNAACAPDTFTYNMLLDVHGKLGKIAELFELYNEMVSRKCKPNVITYNIVISSLAKSNNL 867
+ PDT T+N L+ + + + Y+ M+ PNV TYN +I L+ + +
Sbjct: 718 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 777
Query: 868 DKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAGRLEEAMQLFEEMPDYGCKPNCAIFNIL 927
+ + ++ S P TY L+ G AK G ++ +M ++ EM G P + +N+L
Sbjct: 778 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 837
Query: 928 INGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYTILVECLCLAGRVDEALYYFEELKSTGL 987
I+ + G + A +L K M K G+ P+ +Y ++ LC
Sbjct: 838 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC----------------KLCT 897
Query: 988 DPDFIAYNRIINGLGKSQRMEEALALYSEM-RERGIVPDLHTYNAMLLYLGLAGMVEEAE 1047
PD + +N+ K+ + EA L EM E+G +P T + GM +AE
Sbjct: 898 HPD-VEWNK------KAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAE 926
Query: 1048 RMYEE 1050
R +E
Sbjct: 958 RFLKE 926
BLAST of Cp4.1LG06g02870 vs. NCBI nr
Match:
gi|659104199|ref|XP_008452843.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucumis melo])
HSP 1 Score: 1982.6 bits (5135), Expect = 0.0e+00
Identity = 974/1104 (88.22%), Postives = 1035/1104 (93.75%), Query Frame = 1
Query: 1 MFSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
MF TCCNGAFS CQIY SSC+ SSRGLI E+LGDF+TATLSM NWKKHRKKRK+ CR AL
Sbjct: 11 MFGTCCNGAFSECQIYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 70
Query: 61 QNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFVL 120
QNPE+ V VK KT+I VSE+E+L LKSMTD RALSYFYS+ +FP V HTTETCNF+L
Sbjct: 71 QNPEQVMV-VKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFML 130
Query: 121 EFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
EFLRVH+KVEDMAAVF+ MQKKIIRRDL+TYLTIFKALSIRGGLRQ+T L KMR+AGFV
Sbjct: 131 EFLRVHDKVEDMAAVFDLMQKKIIRRDLNTYLTIFKALSIRGGLRQMTTVLNKMRRAGFV 190
Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSETVMVL 240
LNAYSYNGLIHLLIQSGFC EALEVY RMVSEGLKPSLKTYSALMVALGKKRDSETV+VL
Sbjct: 191 LNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSETVIVL 250
Query: 241 LKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALCN 300
LKEME LGLRPNVYT+TICIRVLGRAGKIDEAYEIFRRMD+EGCGPDLVTYTVLIDALCN
Sbjct: 251 LKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCN 310
Query: 301 AGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMPDVVT 360
AG+LE+AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW QMEADGYMPDVVT
Sbjct: 311 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWNQMEADGYMPDVVT 370
Query: 361 FTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLLDTME 420
FTILVD LCKA DF EAFATFDVMRKQGILPNLHTYN+LICGLL+AGRIEDALKLLDTME
Sbjct: 371 FTILVDALCKAGDFVEAFATFDVMRKQGILPNLHTYNSLICGLLRAGRIEDALKLLDTME 430
Query: 421 SLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAESGRLR 480
S+GV+PTAYTY+IFIDYFGKSGDTGKAVETFEKMKA+GIVPNIVACNASLYSLAE GRLR
Sbjct: 431 SVGVRPTAYTYIIFIDYFGKSGDTGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLR 490
Query: 481 EAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSLI 540
EAK MFNGLRENGLAPDSVTYNMMMKCYSKVGQVD+AVNLL EMI+NGCEPDVIVVNSLI
Sbjct: 491 EAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 550
Query: 541 DSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIKQRCS 600
DSLYKAGRVDEAW+MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI+QRCS
Sbjct: 551 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEQRCS 610
Query: 601 PNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFWF 660
PNTISFNTLLDCFCKNDE+ELAL+MFSKMT MDCKPDVLTYNTVIYGLIKEN+VN+AFWF
Sbjct: 611 PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWF 670
Query: 661 FHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
FHQLKKS++PDHVTICTLLPG+VK GRIGDAIKIA+DF+ QV+FRVNRSFWEDLMGGTLV
Sbjct: 671 FHQLKKSIHPDHVTICTLLPGLVKCGRIGDAIKIARDFMYQVRFRVNRSFWEDLMGGTLV 730
Query: 721 EAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
EAE+DKAIIFAEELVLNGICREDSFLIPL+RVLCK KR LYAYQIFE FT L I PT+A
Sbjct: 731 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFEKFTKKLGISPTLA 790
Query: 781 SYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFELYNEM 840
SYNCLIGELLEV YTEKAWDLFQDMKN CAPDTFTYNMLL VHGK GKI ELFELY EM
Sbjct: 791 SYNCLIGELLEVRYTEKAWDLFQDMKNVGCAPDTFTYNMLLAVHGKSGKITELFELYKEM 850
Query: 841 VSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAGRL 900
+SR+CKP+ ITYNI+ISSLAKSNNLDKALDF+YDLVS+DF PTP TYGPL+DGLAK GRL
Sbjct: 851 ISRRCKPDAITYNIIISSLAKSNNLDKALDFFYDLVSNDFRPTPRTYGPLIDGLAKVGRL 910
Query: 901 EEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYTIL 960
EEAM LFEEM DYGCKPNCAIFNILINGYGK GD E A QLFKRMV EGIRPDLKSYTIL
Sbjct: 911 EEAMWLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 970
Query: 961 VECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRERGI 1020
V+CLCLAGRVDEALYYF ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY+EMR RGI
Sbjct: 971 VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1030
Query: 1021 VPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPEHAYT 1080
VPDL+TYN+++L LGLAGMVE+A++MYEELQLAGLEPDVFTYNALIRGYS+S NPEHAYT
Sbjct: 1031 VPDLYTYNSLMLNLGLAGMVEQAKKMYEELQLAGLEPDVFTYNALIRGYSMSENPEHAYT 1090
Query: 1081 VYKNMMVDGCNPNDGTYAQLPNPS 1105
VYKNMMVDGCNPN GTYAQLPN S
Sbjct: 1091 VYKNMMVDGCNPNIGTYAQLPNQS 1113
BLAST of Cp4.1LG06g02870 vs. NCBI nr
Match:
gi|778696900|ref|XP_004145582.2| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Cucumis sativus])
HSP 1 Score: 1972.2 bits (5108), Expect = 0.0e+00
Identity = 970/1104 (87.86%), Postives = 1031/1104 (93.39%), Query Frame = 1
Query: 1 MFSTCCNGAFSNCQIYASSCSGSSRGLISENLGDFRTATLSMANWKKHRKKRKNVCRFAL 60
MF TCCNGAFS CQ+Y SSC+ SSRGLI E+LGDF+TATLSM NWKKHRKKRK+ CR AL
Sbjct: 11 MFGTCCNGAFSECQVYVSSCNRSSRGLIWESLGDFQTATLSMVNWKKHRKKRKDFCRLAL 70
Query: 61 QNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETCNFVL 120
QNPE+ V VK KT+I VSE+E+L LKSMTD RALSYFYS+ +FP V HTTETCNF+L
Sbjct: 71 QNPEQVMV-VKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFML 130
Query: 121 EFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRKAGFV 180
EFLRVH+KVEDMAAVFEFMQKKIIRRDL TYLTIFKALSIRGGLRQ+T L KMRKAGFV
Sbjct: 131 EFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFV 190
Query: 181 LNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSETVMVL 240
LNAYSYNGLIHLLIQSGFC EALEVY RMVSEGLKPSLKTYSALMVALGKKRDSE VMVL
Sbjct: 191 LNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVL 250
Query: 241 LKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLIDALCN 300
LKEME LGLRPNVYT+TICIRVLGRAGKIDEAYEIFRRMD+EGCGPDLVTYTVLIDALCN
Sbjct: 251 LKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCN 310
Query: 301 AGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMPDVVT 360
AG+LE+AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT KEFW QMEADGYMPDVVT
Sbjct: 311 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVT 370
Query: 361 FTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLLDTME 420
FTILVD LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLL+AGRIEDALKLLDTME
Sbjct: 371 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME 430
Query: 421 SLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAESGRLR 480
S+GVQPTAYTY+ FIDYF KSG+T KAVETFEK+KA+GIVPNIVA NASLYSLAE GRLR
Sbjct: 431 SVGVQPTAYTYITFIDYFXKSGETVKAVETFEKIKAKGIVPNIVAXNASLYSLAEMGRLR 490
Query: 481 EAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVVNSLI 540
EAK MFNGLRENGLAPDSVTYNMMMKCYSKVGQVD+AVNLL EMI+NGCE DVIVVNSLI
Sbjct: 491 EAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCELDVIVVNSLI 550
Query: 541 DSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIKQRCS 600
DSLYKAGRVDEAW+MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI+++CS
Sbjct: 551 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCS 610
Query: 601 PNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNYAFWF 660
PNTISFNTLLDCFCKNDE+ELAL+MFSKMT MDCKPDVLTYNTVIYGLIKEN+VN+AFWF
Sbjct: 611 PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWF 670
Query: 661 FHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMGGTLV 720
FHQLKKSM+PDHVTICTLLPG+VK G+IGDAI IA+DF+ QV+FRVNRSFWEDLMGGTLV
Sbjct: 671 FHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 730
Query: 721 EAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIKPTVA 780
EAE+DKAIIFAEELVLNGICREDSFLIPL+RVLCK KR LYAYQIF+ FT L I PT+A
Sbjct: 731 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 790
Query: 781 SYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFELYNEM 840
SYNCLIGELLEVHYTEKAWDLF+DMKN CAPD FT+NMLL VHGK GKI ELFELY EM
Sbjct: 791 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 850
Query: 841 VSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAKAGRL 900
+SR+CKP+ ITYNIVISSLAKSNNLDKALDF+YDLVSSDF PTP TYGPL+DGLAK GRL
Sbjct: 851 ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 910
Query: 901 EEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKSYTIL 960
EEAM+LFEEM DYGCKPNCAIFNILINGYGK GD E A QLFKRMV EGIRPDLKSYTIL
Sbjct: 911 EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 970
Query: 961 VECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMRERGI 1020
V+CLCLAGRVDEALYYF ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY+EMR RGI
Sbjct: 971 VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1030
Query: 1021 VPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPEHAYT 1080
VPDL+TYN+++L LGLAGMVE+A+RMYEELQLAGLEPDVFTYNALIRGYS+S NPEHAYT
Sbjct: 1031 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1090
Query: 1081 VYKNMMVDGCNPNDGTYAQLPNPS 1105
VYKNMMVDGCNPN GTYAQLPN S
Sbjct: 1091 VYKNMMVDGCNPNIGTYAQLPNQS 1113
BLAST of Cp4.1LG06g02870 vs. NCBI nr
Match:
gi|657971683|ref|XP_008377633.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Malus domestica])
HSP 1 Score: 1563.5 bits (4047), Expect = 0.0e+00
Identity = 757/1106 (68.44%), Postives = 910/1106 (82.28%), Query Frame = 1
Query: 3 STCCNG-----AFSNCQIYASSCSGSSRGLISENLGDFRT-ATLSMANWKKHRKKRKNVC 62
S CC+ AF++ +I+A S L + N G + S++N KK+ KK C
Sbjct: 10 SMCCSSVNXSVAFTDDRIFAGS-------LKARNFGKLKVWGCGSLSNLKKNXKKXMGFC 69
Query: 63 RFALQNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETC 122
F ++ EE V K+ KI VS EE++R LKS +D AL+ F S + P V HTTETC
Sbjct: 70 GFVMKRSEEEVVVGKKSPKISVSSEEVVRVLKSASDPKSALALFKSFAELPSVVHTTETC 129
Query: 123 NFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRK 182
N++LE LRV +VEDMA VF+ MQK+II R L TYLTIFK L +RGG+RQ AL++MRK
Sbjct: 130 NYMLEVLRVDRRVEDMAYVFDLMQKQIINRSLETYLTIFKGLDVRGGIRQAPFALEEMRK 189
Query: 183 AGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSET 242
AGFVLNAYSYNGLI+ LIQSG+C EALEVY R+VSEG+KPSLKTYSALMVALGK+RD +T
Sbjct: 190 AGFVLNAYSYNGLIYNLIQSGYCREALEVYERVVSEGIKPSLKTYSALMVALGKRRDVKT 249
Query: 243 VMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLID 302
VM LL EMESLGLRPNVYT+TICIRVLGRAGKIDEAYE F+RMD+EGCGPD+VTYTVLID
Sbjct: 250 VMSLLNEMESLGLRPNVYTFTICIRVLGRAGKIDEAYEXFKRMDDEGCGPDVVTYTVLID 309
Query: 303 ALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMP 362
ALCNAG+L+ AKELFVKMKA+GHKPDQV YITLLDKF+D DLDTVKEFW +MEADGY P
Sbjct: 310 ALCNAGKLDKAKELFVKMKASGHKPDQVTYITLLDKFSDGKDLDTVKEFWSEMEADGYAP 369
Query: 363 DVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLL 422
DVVTFTILV+ LCKA + DEAF D MRKQG+ PNLHTYNTLI GLL+ R+++ALKL
Sbjct: 370 DVVTFTILVNALCKAGNVDEAFNMLDTMRKQGVSPNLHTYNTLIGGLLRLCRLDEALKLF 429
Query: 423 DTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAES 482
++++ LGV PTAYTY++FIDY+GK GD+GKA+E FEKMK +GIVPNIVACNASLYSLAE
Sbjct: 430 NSIDCLGVPPTAYTYILFIDYYGKCGDSGKAMEAFEKMKNKGIVPNIVACNASLYSLAEE 489
Query: 483 GRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVV 542
GRL+EA++++N L+ GL+PDSVTYN+MMKC+SKVGQ+D+A+ LL EM +NGCE DVI+V
Sbjct: 490 GRLQEAQDVYNELKYYGLSPDSVTYNIMMKCFSKVGQIDEAIELLSEMERNGCEADVIIV 549
Query: 543 NSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIK 602
NSLID LYKA RVDEAW+MF RMK+MKL+PTVVTYNTLL+ LGK+G VQKAIE+FE+M +
Sbjct: 550 NSLIDMLYKADRVDEAWQMFYRMKEMKLTPTVVTYNTLLAALGKDGEVQKAIEMFENMAE 609
Query: 603 QRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNY 662
Q C PNTI+FNTLL+C CKNDE+ LAL+MF KMT M C PDVLTYNT+IYGLI+ENR++Y
Sbjct: 610 QGCPPNTITFNTLLNCLCKNDEVTLALKMFCKMTTMSCSPDVLTYNTIIYGLIRENRIDY 669
Query: 663 AFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMG 722
AFWFFHQ+KKS+ PDH+T+CTLLP +VK GRI D KIA++F+ QV R +R FWEDLMG
Sbjct: 670 AFWFFHQMKKSLXPDHITLCTLLPRVVKDGRIEDGFKIAENFVYQVGVRADRPFWEDLMG 729
Query: 723 GTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIK 782
G L+EAEID+AI+FAE L+ + ICR+DS LIPL+RVLC Q++A A+++FE FT L IK
Sbjct: 730 GILIEAEIDRAILFAERLISDRICRDDSVLIPLLRVLCTQRKAFDAHKVFEKFTKXLGIK 789
Query: 783 PTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFEL 842
PT+ + N LI LL+ H E+AWDLF++MKN C PD FTYN+LLD HGK G I ELFEL
Sbjct: 790 PTLEACNYLIEWLLKDHAAERAWDLFKEMKNGGCTPDVFTYNLLLDAHGKSGNITELFEL 849
Query: 843 YNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAK 902
Y EM+ R CKPN +T+NIVISSL KS+++D A+D YYDLVS DF P+PCTYGPL+DGL K
Sbjct: 850 YEEMIFRGCKPNTVTHNIVISSLVKSDSVDXAIDLYYDLVSGDFSPSPCTYGPLIDGLFK 909
Query: 903 AGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKS 962
+GRL+EAM F+EM DYGCKPN AIFNILING+ KTGD E A LF+RM+KEGIRPDLKS
Sbjct: 910 SGRLDEAMHFFDEMADYGCKPNSAIFNILINGFAKTGDAEAACDLFRRMIKEGIRPDLKS 969
Query: 963 YTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMR 1022
YTILV+CLC AGRVD+A+ YFEELK +GLDPD ++YN +INGLG+S+R+EEAL+LY EMR
Sbjct: 970 YTILVDCLCQAGRVDDAVDYFEELKQSGLDPDSVSYNLMINGLGRSRRVEEALSLYDEMR 1029
Query: 1023 ERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPE 1082
RGI PDL+TYN+++L LGL GMVE+A R+YEELQL GLEPDVFTYNALIR YS SG+P+
Sbjct: 1030 TRGIAPDLYTYNSLILNLGLVGMVEQARRIYEELQLVGLEPDVFTYNALIRLYSTSGDPD 1089
Query: 1083 HAYTVYKNMMVDGCNPNDGTYAQLPN 1103
HAY VYKNMMV GC+PN GT+AQLPN
Sbjct: 1090 HAYAVYKNMMVGGCSPNVGTFAQLPN 1108
BLAST of Cp4.1LG06g02870 vs. NCBI nr
Match:
gi|645227745|ref|XP_008220663.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Prunus mume])
HSP 1 Score: 1562.7 bits (4045), Expect = 0.0e+00
Identity = 756/1106 (68.35%), Postives = 917/1106 (82.91%), Query Frame = 1
Query: 3 STCCNG-----AFSNCQIYASSCSGSSRGLISENLGDFRT-ATLSMANWKKHRKKRKNVC 62
S CC+ AF++ +I+A S +GS L N G + S+ N K RKKR
Sbjct: 10 SMCCSSINYSLAFTDNRIFAISHTGS---LKERNCGKLKAWPCRSLVNLTKKRKKRMGFG 69
Query: 63 RFALQNPEEATVAVKEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTETC 122
F +++ +E VA K+K KI VS EE++R LKS+ D A S+F S + P V HTTETC
Sbjct: 70 GFVIKSSQEVVVA-KKKPKISVSSEEVVRVLKSIADPKSAFSFFKSFAELPSVVHTTETC 129
Query: 123 NFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMRK 182
N++LE LRVH +VEDMA VF+ MQK+II+R+L TYLTIFK L IRGG+RQ AL++MRK
Sbjct: 130 NYMLEILRVHRRVEDMAYVFDVMQKQIIKRNLDTYLTIFKGLDIRGGIRQAPSALEEMRK 189
Query: 183 AGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSET 242
+GF+LNAYSYNGLI+ LIQSG+C EALEVY R+VSEG+KPSLKTYSALMV+LGK+RD +T
Sbjct: 190 SGFILNAYSYNGLIYNLIQSGYCREALEVYERVVSEGIKPSLKTYSALMVSLGKRRDVKT 249
Query: 243 VMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLID 302
VM LLKEMESLGLRPNVYT+TICIR LGRAGKIDEAYEIF+RMDEEGCGPD++TYTVLID
Sbjct: 250 VMGLLKEMESLGLRPNVYTFTICIRALGRAGKIDEAYEIFKRMDEEGCGPDVITYTVLID 309
Query: 303 ALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYMP 362
ALC AG+L++AKELF KMK++GHKPDQV YITLLDKF+D DLD VKEFW +MEADGY P
Sbjct: 310 ALCTAGKLDNAKELFAKMKSSGHKPDQVTYITLLDKFSDGKDLDAVKEFWREMEADGYAP 369
Query: 363 DVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKLL 422
+VVTFTILV+ LCKA + DEAF+ D+MRKQG+ PNLHTYNTL+CGLL+ R+++AL L
Sbjct: 370 EVVTFTILVNALCKAGNVDEAFSMLDIMRKQGVSPNLHTYNTLLCGLLRLCRLDEALNLF 429
Query: 423 DTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAES 482
++ME LGV PTAYTY++FIDY+GK G +GKA+E FEKMKARGIVPNIVACNASLYSLAE
Sbjct: 430 NSMECLGVPPTAYTYILFIDYYGKCGKSGKAIEAFEKMKARGIVPNIVACNASLYSLAEE 489
Query: 483 GRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIVV 542
GRL+EA++++N L+ +GL+PDSVTYNMMMKCYSKVGQ+D+A+ LL EM +NGCE DVI+V
Sbjct: 490 GRLQEAQHVYNELKYSGLSPDSVTYNMMMKCYSKVGQLDEAIKLLSEMERNGCEADVIIV 549
Query: 543 NSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIK 602
NSLID LYKA RVDEAW+MF RMK+MKL+PTVVTYNT EG+VQKAIE+FE+M +
Sbjct: 550 NSLIDILYKADRVDEAWQMFYRMKEMKLTPTVVTYNTXXXXXXXEGQVQKAIEMFENMTE 609
Query: 603 QRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVNY 662
Q C PNTI+FNTLL+C CKNDE+ LAL+M KMT M+C+PDVLTYNTVIYGLI+E+R++Y
Sbjct: 610 QGCPPNTITFNTLLNCLCKNDEVTLALKMLCKMTTMNCRPDVLTYNTVIYGLIRESRIDY 669
Query: 663 AFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLMG 722
AFWFFHQ+KKS++PDH+T+CTLLPG+VK GR+ DA+KIA+DF+ QV + +R FWEDLMG
Sbjct: 670 AFWFFHQMKKSLFPDHITVCTLLPGVVKDGRVEDALKIAEDFMYQVGVKADRPFWEDLMG 729
Query: 723 GTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEIK 782
G L+EAEID ++FAE L+ + ICR+DS LIPL+R LC +++A A+ IFE FT L IK
Sbjct: 730 GILIEAEIDIVVLFAERLISDRICRDDSVLIPLLRFLCTRRKAFDAHHIFEKFTKTLGIK 789
Query: 783 PTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFEL 842
PT+ +YNCLI LL+ H TE+A DLF +MKN+ CAPD FTYN+LLD +GK G I ELFEL
Sbjct: 790 PTLEAYNCLIEWLLKDHVTERALDLFVEMKNSGCAPDVFTYNLLLDAYGKSGNITELFEL 849
Query: 843 YNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLAK 902
Y EM R CKPN IT+NIVISSL KS+++++A+D YYDLVS DF P+PCTYGPL+DGL K
Sbjct: 850 YEEMNCRGCKPNTITHNIVISSLVKSDSIERAIDLYYDLVSGDFSPSPCTYGPLIDGLFK 909
Query: 903 AGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLKS 962
+GRLEEAM FEEM DYGCKPN AIFNILING+ KTGD+E A +LFKRM +EGIRPDLKS
Sbjct: 910 SGRLEEAMHFFEEMADYGCKPNSAIFNILINGFAKTGDVEAACELFKRMTREGIRPDLKS 969
Query: 963 YTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEMR 1022
YTILV+CLC AGRVD+AL YFEE+K +GLDPD ++YN +INGLG+S+R+EEAL++Y EMR
Sbjct: 970 YTILVDCLCQAGRVDDALQYFEEIKQSGLDPDSVSYNLMINGLGRSRRVEEALSVYDEMR 1029
Query: 1023 ERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNPE 1082
RGI PDL TYN+++L LGL GMVE+A R+YEELQL GLEPDVFTYNALIR YS SGNP+
Sbjct: 1030 TRGIAPDLFTYNSLILNLGLVGMVEQAGRIYEELQLVGLEPDVFTYNALIRLYSTSGNPD 1089
Query: 1083 HAYTVYKNMMVDGCNPNDGTYAQLPN 1103
HAY VYKNMMV GC+PN GT+AQLPN
Sbjct: 1090 HAYAVYKNMMVGGCSPNVGTFAQLPN 1111
BLAST of Cp4.1LG06g02870 vs. NCBI nr
Match:
gi|694356830|ref|XP_009359106.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic-like [Pyrus x bretschneideri])
HSP 1 Score: 1557.7 bits (4032), Expect = 0.0e+00
Identity = 755/1107 (68.20%), Postives = 909/1107 (82.11%), Query Frame = 1
Query: 3 STCCNG-----AFSNCQIYASSCSGSSRGLISENLGDFRT-ATLSMANWKKHRKKRKNVC 62
S CC+ +F++ +I+A S GS L + N G S++N K RKK C
Sbjct: 10 SMCCSSVNYSFSFTDNRIFAISHFGS---LKARNFGKLNVWGCGSLSNLTKKRKKGMGFC 69
Query: 63 RFALQNPEEATVAV-KEKTKIPVSEEEILRALKSMTDTTRALSYFYSVPDFPCVQHTTET 122
F ++ EE V V K+ KI VS EE++R LKS++D AL+ F S + P V HTTET
Sbjct: 70 GFVMKRSEEEEVVVGKKNPKISVSSEEVMRVLKSVSDPKSALALFKSFAELPSVVHTTET 129
Query: 123 CNFVLEFLRVHEKVEDMAAVFEFMQKKIIRRDLSTYLTIFKALSIRGGLRQVTIALKKMR 182
CN++LE L V +VEDMA VF+ MQK+II R L TYLTIFK L +RGG+RQ AL+ MR
Sbjct: 130 CNYMLEVLGVDRRVEDMAYVFDLMQKQIINRSLDTYLTIFKGLDVRGGIRQAPFALEVMR 189
Query: 183 KAGFVLNAYSYNGLIHLLIQSGFCSEALEVYGRMVSEGLKPSLKTYSALMVALGKKRDSE 242
KAGFVLNAYSYNGLI+ LIQSG+C EALEVY R++SEG+KPSLKTYSALMVALGK+RD +
Sbjct: 190 KAGFVLNAYSYNGLIYNLIQSGYCREALEVYERVISEGIKPSLKTYSALMVALGKRRDVK 249
Query: 243 TVMVLLKEMESLGLRPNVYTYTICIRVLGRAGKIDEAYEIFRRMDEEGCGPDLVTYTVLI 302
TVM LL EME LGLRPNVYT+TICIRVLGRAGK DEAYEIF+RMD+EGCGPD+VTYTVLI
Sbjct: 250 TVMSLLNEMEILGLRPNVYTFTICIRVLGRAGKFDEAYEIFKRMDDEGCGPDVVTYTVLI 309
Query: 303 DALCNAGRLESAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTVKEFWGQMEADGYM 362
DALCNAG+L+ AKELFVKMKA+GHKPDQV YITLLDKF+D DL TVKEFW +MEADGY
Sbjct: 310 DALCNAGKLDKAKELFVKMKASGHKPDQVTYITLLDKFSDGKDLGTVKEFWSEMEADGYA 369
Query: 363 PDVVTFTILVDTLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLKAGRIEDALKL 422
PDVVTFTILV+ LCKA + DEAF D MRKQG+ PNLHTYNTLI GLL+ R+++ALKL
Sbjct: 370 PDVVTFTILVNALCKAGNVDEAFNMLDTMRKQGVSPNLHTYNTLIGGLLQLCRLDEALKL 429
Query: 423 LDTMESLGVQPTAYTYVIFIDYFGKSGDTGKAVETFEKMKARGIVPNIVACNASLYSLAE 482
++++ LGV PTAYTY++FIDY+GK GD+GKA+E FEKMK +GIVPNIVACNASLYSLAE
Sbjct: 430 FNSIDCLGVPPTAYTYILFIDYYGKCGDSGKAMEAFEKMKNKGIVPNIVACNASLYSLAE 489
Query: 483 SGRLREAKNMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDDAVNLLFEMIKNGCEPDVIV 542
GRL+EA++++N L+ GL+PDSVTYNMMMKCYSKVGQ+D+A+ LL EM +NGCE DVI+
Sbjct: 490 EGRLQEAQDVYNELKYYGLSPDSVTYNMMMKCYSKVGQIDEAIELLLEMERNGCEADVII 549
Query: 543 VNSLIDSLYKAGRVDEAWKMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 602
VNSLID LYKA RVDEAW+MF RMK+MKL+PTVVTYNTLL+ LGK+G ++KAIE+FE+M
Sbjct: 550 VNSLIDMLYKADRVDEAWQMFYRMKEMKLTPTVVTYNTLLAALGKDGEIEKAIEMFENMA 609
Query: 603 KQRCSPNTISFNTLLDCFCKNDEIELALEMFSKMTEMDCKPDVLTYNTVIYGLIKENRVN 662
+Q C PNTI+FNTLL+C CKNDE+ LAL+MF KMT M C PDVLTYNT++YGLI+ENR++
Sbjct: 610 EQGCPPNTITFNTLLNCLCKNDEVTLALKMFCKMTTMSCSPDVLTYNTILYGLIRENRID 669
Query: 663 YAFWFFHQLKKSMYPDHVTICTLLPGIVKSGRIGDAIKIAKDFINQVQFRVNRSFWEDLM 722
YAFWFFHQ+KK + PDH+T+CTLLPG+VK GRI DA KIA++F+ QV R +R FWEDLM
Sbjct: 670 YAFWFFHQMKKLLLPDHITLCTLLPGVVKDGRIEDAFKIAENFMYQVGVRADRPFWEDLM 729
Query: 723 GGTLVEAEIDKAIIFAEELVLNGICREDSFLIPLIRVLCKQKRALYAYQIFENFTTNLEI 782
GG L+EAEID+AI+FAE L+ + ICR+DS LIPL+RVLC Q++A A+++FE FT L I
Sbjct: 730 GGILIEAEIDRAILFAERLISDRICRDDSVLIPLLRVLCTQRKAFDAHKVFEKFTKTLGI 789
Query: 783 KPTVASYNCLIGELLEVHYTEKAWDLFQDMKNAACAPDTFTYNMLLDVHGKLGKIAELFE 842
KPT+ +YN LI LL+ H E+AWDLF++MKN C PD FTYN+ LD HGK G I ELFE
Sbjct: 790 KPTLEAYNYLIEWLLKDHAAERAWDLFKEMKNGGCTPDVFTYNLFLDAHGKSGNITELFE 849
Query: 843 LYNEMVSRKCKPNVITYNIVISSLAKSNNLDKALDFYYDLVSSDFCPTPCTYGPLLDGLA 902
LY EM+ R CKPN +T+NIVISSL KS+++D A+D YYDLVS DF P+PCTYGPL+DGL
Sbjct: 850 LYEEMIFRGCKPNTVTHNIVISSLVKSDSVDGAIDLYYDLVSGDFSPSPCTYGPLIDGLF 909
Query: 903 KAGRLEEAMQLFEEMPDYGCKPNCAIFNILINGYGKTGDIEIAHQLFKRMVKEGIRPDLK 962
K+GRL+EAM F+EM DYGCKPN AIFNILING+ KTGD+E A LF+RM+KEGIRPDLK
Sbjct: 910 KSGRLDEAMHFFDEMADYGCKPNSAIFNILINGFAKTGDVEAACNLFRRMIKEGIRPDLK 969
Query: 963 SYTILVECLCLAGRVDEALYYFEELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYSEM 1022
SYTILV+CLC AGRVD+A+ YFEELK +GLDPD ++YN +INGLG+S+R+EEAL +Y EM
Sbjct: 970 SYTILVDCLCQAGRVDDAVDYFEELKQSGLDPDSVSYNLMINGLGRSRRVEEALTVYDEM 1029
Query: 1023 RERGIVPDLHTYNAMLLYLGLAGMVEEAERMYEELQLAGLEPDVFTYNALIRGYSVSGNP 1082
R RGI PDL+TYN ++L LGL GMVE+A R+YEELQL GLEPDVFTYNALIR YS SG+P
Sbjct: 1030 RTRGITPDLYTYNLLILNLGLVGMVEQAGRIYEELQLVGLEPDVFTYNALIRLYSTSGDP 1089
Query: 1083 EHAYTVYKNMMVDGCNPNDGTYAQLPN 1103
+HAY VYKNMMVDGC+PN GT+AQLPN
Sbjct: 1090 DHAYAVYKNMMVDGCSPNVGTFAQLPN 1113
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PP344_ARATH | 0.0e+00 | 63.63 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
PP217_ARATH | 4.3e-94 | 28.51 | Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN... | [more] |
PP432_ARATH | 7.6e-91 | 26.20 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN... | [more] |
PP437_ARATH | 1.6e-85 | 26.87 | Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... | [more] |
PP381_ARATH | 2.6e-83 | 25.97 | Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
D7SV48_VITVI | 0.0e+00 | 66.70 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06690 PE=4 SV=... | [more] |
A0A061GHJ7_THECC | 0.0e+00 | 66.88 | Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... | [more] |
W9REB9_9ROSA | 0.0e+00 | 67.00 | Uncharacterized protein OS=Morus notabilis GN=L484_013194 PE=4 SV=1 | [more] |
B9HB63_POPTR | 0.0e+00 | 65.88 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s28060g PE=4 SV=2 | [more] |
A0A0D2QA82_GOSRA | 0.0e+00 | 65.02 | Uncharacterized protein OS=Gossypium raimondii GN=B456_009G063400 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G31850.1 | 0.0e+00 | 63.63 | proton gradient regulation 3 | [more] |
AT3G06920.1 | 2.4e-95 | 28.51 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G55840.1 | 4.3e-92 | 26.20 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G59900.1 | 9.2e-87 | 26.87 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G14770.1 | 1.5e-84 | 25.97 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |