Carg02009 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02009
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Proline-rich family protein
Location	Cucurbita_argyrosperma_scaffold_003 : 1680196 .. 1682750 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTTTCTCCTAAATCCGGACATCAGCTGATAAAGGACACAGCGAGAGGAAGAAAGTTCACGAACTCTCTGCTCCTTTCTCTGAATTCCAAAGCAGTTTGAATCTGTAAAGACATTTCGAGTTTTCTGAGGCGTCGACAAGCGCTTTGGAGGAATTATGGCTTGTGCTTCACAGGCGCTGATTGCCGCTAATTCATGCTCGTTTCTGAGCCAACGAGCCACTAGAAAGTCTCAGAAGGTCTTCAATCAGAGTGCTTCCAATCTAATTTTCACGGTCAGAGCTTCGTCTGAAGATTCCGACTGCAATGTCGACGAATGTGCTCCAGATAAGGAGGTTCGTCCGCTTTCTCGTTGTTGAATAATTCGCAATTCCTTTCGGACCGATTGGATTTCATCTTAATCTCGTTATAATTGATTAGAATATGTAATTAAATGTTGTAGGTGTTGCTAATTGTTCGACAAGTGCTTTTCCTTGAGCTAATCCTCTAATCTGTTCATTGTTGACGTGTTGATTACCAAGACAATTTCATTAAACTAAATGCTCTTTGTTGTATCTATTTGATTGATTAAATGGTTGAATTTTTATAATTTGAAATTCAATCGCTCAGAAAACCATTGTTTAGAAGGAAAAACAAAGTTTGACATAAAATTTCGAGACTCAAATTGGAATACACTAGATTTACGATTATACTTCTGACTTAACAAGATATTTGATTTTACGGCTTACCTTTTGAGCATTGATAGGCACACAAGGAATTTTCAGATGATTTATGCTGTTCTAATTTTTAAACGATATAAAACCCTAACATTGCATTGTCTATTGTAATTGGTAATGCAGGTGGGGAAAGTTAGTATGGAATGGCTAGCAGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGAAGAAAAAAGGGTGGACAGGCTATGTGGAGAAGGACACTGCAGGACAAACAAACATATATTCCGTCGAAGTAAGTATGAATTTTCCAATGATTGAGGATCAAAGTTTTATTTCTGGATTATATGCTTATCTGTAGTAAAATTTGAATATAGGGATTCGGGGTAGGCGTTCATTTGATCTAGTTAAATTGTATGATTCTGTTTCTGAAAGTTTTAGCAGCCAAATTTTTGTAGTTCTACATGTTTGTTTCATGAACTGATAGCTTTTTCACAATGAGTTTGAGTGAATACATTGTTGAGAATTATTAAGAGAAATAGTCACGTTGATTAATTAAGAGGAAGATCATAAATTTATACGTATGAATTTATACGTAAGGAACACTATCTCCATTTGTACGAGGTCTTTTGGAGAAATCAAAAGCAAAGCCACGAGAACTTATGCTCAAATTGGACAATATAATTCCATTGTGGAGGGTCGTGGTTCCTAACCGACATTGTTTTTTATCATTGAGTATTTGAGATAACAAGATAGTTGCATTTTATCTGGTCGGTTTTGATGTTGTGCTGAGCTGCATCCAGTGATTGATTTGTTTCTTATCTATTATTTTCTTGGACGTGTTTCATAACCATTTCGTTTCTTAAATTAAGCTTATAAACACTATTTCTAAATTCTACCATAGTTGTTTTATTTTATTACCTACTCGAACATGTTTTCAAAAAATCAAACATATTTATGAAAATTTAAAACTCTGCTTTTGTTTTTGAAACTTGGTTTCAAAATGAAATGTTCTTATTGAAGAAGGTGAAAGGCTTAAATTATACCTCTGTTCTTTCATTTTTTCTTTATTTGTTCCTCCCTTGGATGTTATTAAATCACCCAGGCTCCTTAAATTGCGTGTACTTGCAGCCAGTAGTATATGTAGCAGAAAGTGCTATAAGCTCGGGGACTGCAGGGTCTTCCTCAGAAGGGGCTGAGAACACACTGGCCATTGCTGGTGGACTTGCACTCATTGCAGTTGCTGCAGCTTCATCTATACTGCTTCAAGTAGGTAAGAAACCACCCGAAGTAAAAATTGTTGAATACACCGGACCCTCACTCAGTTACTACATCAACAAGTTCACTACACCCGCAATTCTCCAACCACCGGTACGAACCGAGTCCGAATCCGAACCCGAATCCTCCTCTCAAGTCGACGGTGTCGCTCCTGAAGTAGTAACCGAGGTTCAAATTCAATCAGACATTGCTGCTCCTGAAGTAGTAACAGGGGTTCAAGTTGAATCCCAAACGACTGAGCCTTCCTCTCCGGCTAGTTGAACCAAATTCATGTGAGTTTCTCTAGAGGTTTTACTTCTGTATTCATCTGTTATGAATATTGGTTTTTGGCGATTACACTACAAATGAAAGCATGATGTTTGCAGATGTGCTGTACTGCCACCCCTTTTTTCTCTTGCTGCGGTTGACTGAGTGGAGGATAGATGGGGTGTGAATCGGTTGACTGTGTAAACAGAAACTTTAAACGACCTTTACCCATCTTTTTTGAGCTAGAAAAATAAATATAAGTAACAGATACATATATAAATATTTTATTAAATTTTGAAAACTATATGTACCAAAAATCCTGCGTAAATGCATACTTTTTTAAATTTCTTATT

mRNA sequence

CTCGTTTCTCCTAAATCCGGACATCAGCTGATAAAGGACACAGCGAGAGGAAGAAAGTTCACGAACTCTCTGCTCCTTTCTCTGAATTCCAAAGCAGTTTGAATCTGTAAAGACATTTCGAGTTTTCTGAGGCGTCGACAAGCGCTTTGGAGGAATTATGGCTTGTGCTTCACAGGCGCTGATTGCCGCTAATTCATGCTCGTTTCTGAGCCAACGAGCCACTAGAAAGTCTCAGAAGGTCTTCAATCAGAGTGCTTCCAATCTAATTTTCACGGTCAGAGCTTCGTCTGAAGATTCCGACTGCAATGTCGACGAATGTGCTCCAGATAAGGAGGTGGGGAAAGTTAGTATGGAATGGCTAGCAGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGAAGAAAAAAGGGTGGACAGGCTATGTGGAGAAGGACACTGCAGGACAAACAAACATATATTCCGTCGAACCAGTAGTATATGTAGCAGAAAGTGCTATAAGCTCGGGGACTGCAGGGTCTTCCTCAGAAGGGGCTGAGAACACACTGGCCATTGCTGGTGGACTTGCACTCATTGCAGTTGCTGCAGCTTCATCTATACTGCTTCAAGTAGGTAAGAAACCACCCGAAGTAAAAATTGTTGAATACACCGGACCCTCACTCAGTTACTACATCAACAAGTTCACTACACCCGCAATTCTCCAACCACCGGTACGAACCGAGTCCGAATCCGAACCCGAATCCTCCTCTCAAGTCGACGGTGTCGCTCCTGAAGTAGTAACCGAGGTTCAAATTCAATCAGACATTGCTGCTCCTGAAGTAGTAACAGGGGTTCAAGTTGAATCCCAAACGACTGAGCCTTCCTCTCCGGCTAGTTGAACCAAATTCATATGTGCTGTACTGCCACCCCTTTTTTCTCTTGCTGCGGTTGACTGAGTGGAGGATAGATGGGGTGTGAATCGGTTGACTGTGTAAACAGAAACTTTAAACGACCTTTACCCATCTTTTTTGAGCTAGAAAAATAAATATAAGTAACAGATACATATATAAATATTTTATTAAATTTTGAAAACTATATGTACCAAAAATCCTGCGTAAATGCATACTTTTTTAAATTTCTTATT

Coding sequence (CDS)

ATGGCTTGTGCTTCACAGGCGCTGATTGCCGCTAATTCATGCTCGTTTCTGAGCCAACGAGCCACTAGAAAGTCTCAGAAGGTCTTCAATCAGAGTGCTTCCAATCTAATTTTCACGGTCAGAGCTTCGTCTGAAGATTCCGACTGCAATGTCGACGAATGTGCTCCAGATAAGGAGGTGGGGAAAGTTAGTATGGAATGGCTAGCAGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGAAGAAAAAAGGGTGGACAGGCTATGTGGAGAAGGACACTGCAGGACAAACAAACATATATTCCGTCGAACCAGTAGTATATGTAGCAGAAAGTGCTATAAGCTCGGGGACTGCAGGGTCTTCCTCAGAAGGGGCTGAGAACACACTGGCCATTGCTGGTGGACTTGCACTCATTGCAGTTGCTGCAGCTTCATCTATACTGCTTCAAGTAGGTAAGAAACCACCCGAAGTAAAAATTGTTGAATACACCGGACCCTCACTCAGTTACTACATCAACAAGTTCACTACACCCGCAATTCTCCAACCACCGGTACGAACCGAGTCCGAATCCGAACCCGAATCCTCCTCTCAAGTCGACGGTGTCGCTCCTGAAGTAGTAACCGAGGTTCAAATTCAATCAGACATTGCTGCTCCTGAAGTAGTAACAGGGGTTCAAGTTGAATCCCAAACGACTGAGCCTTCCTCTCCGGCTAGTTGA

Protein sequence

MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEVGKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAGSSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAILQPPVRTESESEPESSSQVDGVAPEVVTEVQIQSDIAAPEVVTGVQVESQTTEPSSPAS

Homology

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BLAST of Carg02009 vs. NCBI nr
Match: XP_022956374.1 (protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucurbita moschata])

HSP 1 Score: 391.0 bits (1003), Expect = 3.0e-105
Identity = 207/208 (99.52%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACASQALIAANSCSFLSQRATRKSQK+FNQSASNLIFTVRASSEDSDCNVDECAPDKEV
Sbjct: 1   MACASQALIAANSCSFLSQRATRKSQKLFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI
Sbjct: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180

Query: 181 LQPPVRTESESEPESSSQVDGVAPEVVT 209
           LQPPVRTESESEPESSSQVDGVAPEVVT
Sbjct: 181 LQPPVRTESESEPESSSQVDGVAPEVVT 208

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BLAST of Carg02009 vs. NCBI nr
Match: XP_023523079.1 (protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.6 bits (976), Expect = 4.0e-102
Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACASQALIAANSCSFLSQRA RKSQK+FNQSASNLIFTVRASSEDSDCNVDECAPDKEV
Sbjct: 2   MACASQALIAANSCSFLSQRAIRKSQKLFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 61

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 62  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 121

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           +SSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPE+K+VEYTGPSLSYYINKFTTPAI
Sbjct: 122 TSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEIKVVEYTGPSLSYYINKFTTPAI 181

Query: 181 LQPPVRTESESEPESSSQVDGVAPEVV 208
           LQPPVR ESESEPESSSQVD VAPEVV
Sbjct: 182 LQPPVRAESESEPESSSQVDSVAPEVV 208

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BLAST of Carg02009 vs. NCBI nr
Match: XP_022991199.1 (protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucurbita maxima])

HSP 1 Score: 376.7 bits (966), Expect = 5.8e-101
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACASQALIAANSCSFLSQRATRKSQK+FNQSASNLIFTVRASSEDSDCNVDECAPDKEV
Sbjct: 2   MACASQALIAANSCSFLSQRATRKSQKLFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 61

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSG AG
Sbjct: 62  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGNAG 121

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI
Sbjct: 122 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 181

Query: 181 LQPPVRTESESEPESSSQVDGVAP 205
           LQPPVRTESES+ ESSSQVDGVAP
Sbjct: 182 LQPPVRTESESKLESSSQVDGVAP 205

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BLAST of Carg02009 vs. NCBI nr
Match: XP_004142377.1 (PREDICTED: uncharacterized protein LOC101215285 [Cucumis sativus] >KGN52344.1 hypothetical protein Csa_5G626040 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 176/206 (85.44%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACASQ LIAANSCSF S RA RKSQ++F+Q+ SNL+ TVRASSEDSDCNVDECAPDKEV
Sbjct: 2   MACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKEV 61

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GK+SMEWLAGEKTKVVGTYPP++KGWTGYVEKDTAGQTNIYS+EPVVYVAESAISSGTAG
Sbjct: 62  GKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSIEPVVYVAESAISSGTAG 121

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           SSSEGAENTLAIAGG+ALIAVA ASSILLQVGKKPPEVK VEYTGPSLSYYINKF T  I
Sbjct: 122 SSSEGAENTLAIAGGIALIAVAVASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTREI 181

Query: 181 LQPPVRTESESEPESSSQVDGVAPEV 207
           +QPPV    +SEPESSSQ+DGV P+V
Sbjct: 182 VQPPV----QSEPESSSQIDGVTPQV 203

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BLAST of Carg02009 vs. NCBI nr
Match: XP_008446990.1 (PREDICTED: uncharacterized protein LOC103489534 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88
Identity = 178/206 (86.41%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACASQ LIAANSCSF S RA RKSQ++F+Q+ SNL+ TVRASSEDSDCNVDECAPDKEV
Sbjct: 1   MACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKEV 60

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GK+SMEWLAGEKTKVVGTYPP++KGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 61  GKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           SSSEGAENTLAIAGG+ALIAVAAASSILLQVGKKPPEVK VEYTGPSLSYYINKF T  I
Sbjct: 121 SSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTREI 180

Query: 181 LQPPVRTESESEPESSSQVDGVAPEV 207
           +QP      +SEPESSSQVDGV PEV
Sbjct: 181 VQP-----VQSEPESSSQVDGVTPEV 201

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BLAST of Carg02009 vs. TAIR10
Match: AT5G07020.1 (proline-rich family protein)

HSP 1 Score: 220.7 bits (561), Expect = 9.7e-58
Identity = 123/193 (63.73%), Postives = 149/193 (77.20%), Query Frame = 0


Query: 5   SQALIAANSCSFLSQRATRKSQKVFNQSASNLIF--TVRASSEDSDCNVDECAPDKEVGK 64
           S  L++ N   F S +     + + ++S    +F   VRASS+D+DCN +ECAP+KEVG 
Sbjct: 2   SNVLLSPNGYVFASPKPL--GRFINSKSGGRKLFFSVVRASSDDADCNAEECAPEKEVGT 61

Query: 65  VSMEWLAGEKTKVVGTYPPKK-KGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAGS 124
           VSMEWLAGEKTKVVGT+PP+K +GWTGYVEKDTAGQTN+YS+EP VYVAESAISSGTAGS
Sbjct: 62  VSMEWLAGEKTKVVGTFPPRKPRGWTGYVEKDTAGQTNVYSIEPAVYVAESAISSGTAGS 121

Query: 125 SSEGAENTLAIAGGLALIAVAAASSILLQVGK-KPPEVKIVEYTGPSLSYYINKFTTPAI 184
           S++GAENT AI  G+ALIAVAAASSILLQVGK  P   K V+Y+GPSLSYYINKF    I
Sbjct: 122 SADGAENTAAIVAGIALIAVAAASSILLQVGKDAPTRPKAVDYSGPSLSYYINKFKPSEI 181

Query: 185 LQPPVRTESESEP 194
           +QP   + +E+ P
Sbjct: 182 VQPSTPSVTEAPP 192

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BLAST of Carg02009 vs. Swiss-Prot
Match: sp|Q9FL44|MPH1_ARATH (Protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 OS=Arabidopsis thaliana OX=3702 GN=MPH1 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56
Identity = 123/193 (63.73%), Postives = 149/193 (77.20%), Query Frame = 0


Query: 5   SQALIAANSCSFLSQRATRKSQKVFNQSASNLIF--TVRASSEDSDCNVDECAPDKEVGK 64
           S  L++ N   F S +     + + ++S    +F   VRASS+D+DCN +ECAP+KEVG 
Sbjct: 2   SNVLLSPNGYVFASPKPL--GRFINSKSGGRKLFFSVVRASSDDADCNAEECAPEKEVGT 61

Query: 65  VSMEWLAGEKTKVVGTYPPKK-KGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAGS 124
           VSMEWLAGEKTKVVGT+PP+K +GWTGYVEKDTAGQTN+YS+EP VYVAESAISSGTAGS
Sbjct: 62  VSMEWLAGEKTKVVGTFPPRKPRGWTGYVEKDTAGQTNVYSIEPAVYVAESAISSGTAGS 121

Query: 125 SSEGAENTLAIAGGLALIAVAAASSILLQVGK-KPPEVKIVEYTGPSLSYYINKFTTPAI 184
           S++GAENT AI  G+ALIAVAAASSILLQVGK  P   K V+Y+GPSLSYYINKF    I
Sbjct: 122 SADGAENTAAIVAGIALIAVAAASSILLQVGKDAPTRPKAVDYSGPSLSYYINKFKPSEI 181

Query: 185 LQPPVRTESESEP 194
           +QP   + +E+ P
Sbjct: 182 VQPSTPSVTEAPP 192

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BLAST of Carg02009 vs. TrEMBL
Match: tr|A0A0A0KTT1|A0A0A0KTT1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G626040 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 2.6e-89
Identity = 176/206 (85.44%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACASQ LIAANSCSF S RA RKSQ++F+Q+ SNL+ TVRASSEDSDCNVDECAPDKEV
Sbjct: 2   MACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKEV 61

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GK+SMEWLAGEKTKVVGTYPP++KGWTGYVEKDTAGQTNIYS+EPVVYVAESAISSGTAG
Sbjct: 62  GKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSIEPVVYVAESAISSGTAG 121

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           SSSEGAENTLAIAGG+ALIAVA ASSILLQVGKKPPEVK VEYTGPSLSYYINKF T  I
Sbjct: 122 SSSEGAENTLAIAGGIALIAVAVASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTREI 181

Query: 181 LQPPVRTESESEPESSSQVDGVAPEV 207
           +QPPV    +SEPESSSQ+DGV P+V
Sbjct: 182 VQPPV----QSEPESSSQIDGVTPQV 203

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BLAST of Carg02009 vs. TrEMBL
Match: tr|A0A1S3BH89|A0A1S3BH89_CUCME (uncharacterized protein LOC103489534 OS=Cucumis melo OX=3656 GN=LOC103489534 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 7.5e-89
Identity = 178/206 (86.41%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACASQ LIAANSCSF S RA RKSQ++F+Q+ SNL+ TVRASSEDSDCNVDECAPDKEV
Sbjct: 1   MACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKEV 60

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GK+SMEWLAGEKTKVVGTYPP++KGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 61  GKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           SSSEGAENTLAIAGG+ALIAVAAASSILLQVGKKPPEVK VEYTGPSLSYYINKF T  I
Sbjct: 121 SSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTREI 180

Query: 181 LQPPVRTESESEPESSSQVDGVAPEV 207
           +QP      +SEPESSSQVDGV PEV
Sbjct: 181 VQP-----VQSEPESSSQVDGVTPEV 201

[Close]

BLAST of Carg02009 vs. TrEMBL
Match: tr|A0A1S2Y5U0|A0A1S2Y5U0_CICAR (uncharacterized protein LOC101500231 OS=Cicer arietinum OX=3827 GN=LOC101500231 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.8e-67
Identity = 140/191 (73.30%), Postives = 164/191 (85.86%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MAC  QA IAAN+C+F ++R + K +K+ ++  S+ +F VRASS++SDCN +ECAPDKEV
Sbjct: 1   MACTLQATIAANTCTFSTRRFSMKHKKIISK-RSSCMFIVRASSDESDCNDEECAPDKEV 60

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKK-GWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTA 120
           GKVSMEWLA EKTKVVGTYPP++K GWTGYVEKDTAGQTNIYSVEP VYVAESAISSGTA
Sbjct: 61  GKVSMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTA 120

Query: 121 GSSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPA 180
           GSSS+GA+NT AIA GLALI++AAASSILLQVGKKPP+V+  EY+GPSLSYYINKF  P 
Sbjct: 121 GSSSDGAQNTAAIAAGLALISIAAASSILLQVGKKPPQVQTPEYSGPSLSYYINKFVPPE 180

Query: 181 ILQPPVRTESE 191
           I Q P  TE+E
Sbjct: 181 ITQAPAPTETE 190

[Close]

BLAST of Carg02009 vs. TrEMBL
Match: tr|B9SHS4|B9SHS4_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0621010 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.7e-67
Identity = 140/206 (67.96%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MACASQALIAANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKEV 60
           MACAS+A+I AN+C+F S R  +K Q  FN+ +  L FT+RA ++D+DCN +ECAPDKEV
Sbjct: 1   MACASRAMITANTCTFTSPRFFKKYQ-TFNRRSLKL-FTIRAETDDADCNDEECAPDKEV 60

Query: 61  GKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120
           GKVSMEWLAG+KTKV GT+PP+ +GWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 61  GKVSMEWLAGDKTKVAGTFPPRTRGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120

Query: 121 SSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPAI 180
           SS++GAENT AIA G+ALI+VAAASSILLQVGK P E+K VEY+GPSL+YYINKF    I
Sbjct: 121 SSADGAENTAAIAAGIALISVAAASSILLQVGKTPAEIKTVEYSGPSLTYYINKFKPAEI 180

Query: 181 LQPPVRTESESEPESSSQVDGVAPEV 207
           +Q  + +++ES P      +  APEV
Sbjct: 181 VQAALPSQTESSPSIQLPPESSAPEV 204

[Close]

BLAST of Carg02009 vs. TrEMBL
Match: tr|A0A2I4EG97|A0A2I4EG97_9ROSI (uncharacterized protein LOC108989314 OS=Juglans regia OX=51240 GN=LOC108989314 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.1e-66
Identity = 138/208 (66.35%), Postives = 171/208 (82.21%), Query Frame = 0


Query: 1   MACASQALI-AANSCSFLSQRATRKSQKVFNQSASNLIFTVRASSEDSDCNVDECAPDKE 60
           MACASQA++ AAN+C+F +QR      +  ++  ++ +FTV+AS+ED+DCNV+ECAPDKE
Sbjct: 1   MACASQAVMAAANTCTFPTQRWFNNKYQSVSKVRTSSLFTVKASTEDADCNVEECAPDKE 60

Query: 61  VGKVSMEWLAGEKTKVVGTYPPKKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTA 120
           VGKVSMEWLAGEKTKVVGT+PP+K+GWTGYVEKDTAGQTNIYSVEP VYVAE+AISSGTA
Sbjct: 61  VGKVSMEWLAGEKTKVVGTFPPRKQGWTGYVEKDTAGQTNIYSVEPAVYVAETAISSGTA 120

Query: 121 GSSSEGAENTLAIAGGLALIAVAAASSILLQVGKKPPEVKIVEYTGPSLSYYINKFTTPA 180
           GSSS GAENT AIAGGLALI++AAAS++LLQVGK PP+V  VEY+GPSLSYY+NKF    
Sbjct: 121 GSSSNGAENTAAIAGGLALISIAAASTVLLQVGKNPPQVLTVEYSGPSLSYYVNKFKPQE 180

Query: 181 ILQPPVRTESESEPESSSQV-DGVAPEV 207
           I+Q    +++ES       + D  AP++
Sbjct: 181 IIQASAPSQTESLSSVREDIPDMEAPQI 208

The following BLAST results are available for this feature:

BLAST of Carg02009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956374.1	3.0e-105	99.52	protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucurbita moschata]	[more]
XP_023523079.1	4.0e-102	96.62	protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022991199.1	5.8e-101	98.04	protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [Cucurbita maxima]	[more]
XP_004142377.1	3.9e-89	85.44	PREDICTED: uncharacterized protein LOC101215285 [Cucumis sativus] >KGN52344.1 hy...	[more]
XP_008446990.1	1.1e-88	86.41	PREDICTED: uncharacterized protein LOC103489534 [Cucumis melo]	[more]

BLAST of Carg02009 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07020.1	9.7e-58	63.73	proline-rich family protein	[more]

BLAST of Carg02009 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FL44\|MPH1_ARATH	1.7e-56	63.73	Protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg02009 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTT1\|A0A0A0KTT1_CUCSA	2.6e-89	85.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G626040 PE=4 SV=1	[more]
tr\|A0A1S3BH89\|A0A1S3BH89_CUCME	7.5e-89	86.41	uncharacterized protein LOC103489534 OS=Cucumis melo OX=3656 GN=LOC103489534 PE=...	[more]
tr\|A0A1S2Y5U0\|A0A1S2Y5U0_CICAR	2.8e-67	73.30	uncharacterized protein LOC101500231 OS=Cicer arietinum OX=3827 GN=LOC101500231 ...	[more]
tr\|B9SHS4\|B9SHS4_RICCO	4.7e-67	67.96	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0621010 PE=4 SV=1	[more]
tr\|A0A2I4EG97\|A0A2I4EG97_9ROSI	3.1e-66	66.35	uncharacterized protein LOC108989314 OS=Juglans regia OX=51240 GN=LOC108989314 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009535	chloroplast thylakoid membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0061635	regulation of protein complex stability

Vocabulary: **INTERPRO**
Term	Definition
IPR038936	MPH1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061635	regulation of protein complex stability
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02009-RA	Carg02009-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 239..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..202
IPR038936	Protein maintenance of PSII under high light 1	PANTHER	PTHR35753	FAMILY NOT NAMED	coord: 1..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02009	Cla009919	Watermelon (97103) v1	carwmB0840
Carg02009	Csa5G626040	Cucumber (Chinese Long) v2	carcuB0857
Carg02009	MELO3C012494	Melon (DHL92) v3.5.1	carmeB0834
Carg02009	ClCG05G027000	Watermelon (Charleston Gray)	carwcgB0814
Carg02009	CSPI05G27810	Wild cucumber (PI 183967)	carcpiB0877
Carg02009	Cucsa.307760	Cucumber (Gy14) v1	carcgyB0969
Carg02009	Lsi04G000070	Bottle gourd (USVL1VR-Ls)	carlsiB767
Carg02009	Cp4.1LG01g09680	Cucurbita pepo (Zucchini)	carcpeB1177
Carg02009	CsGy5G027240	Cucumber (Gy14) v2	carcgybB0831
Carg02009	MELO3C012494.2	Melon (DHL92) v3.6.1	carmedB0846
Carg02009	CsaV3_5G036960	Cucumber (Chinese Long) v3	carcucB0881

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02009	Wax gourd	carwgoB0984
Carg02009	Silver-seed gourd	carcarB591
Carg02009	Cucurbita maxima (Rimu)	carcmaB1167
Carg02009	Cucurbita maxima (Rimu)	carcmaB1170
Carg02009	Cucurbita moschata (Rifu)	carcmoB1135
Carg02009	Cucurbita moschata (Rifu)	carcmoB1138
Carg02009	Cucurbita pepo (Zucchini)	carcpeB1169