Csa5G626040 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACAGCCATCCCAGTGTAAAAAGATCTCGTCTCCCGAGGGCAACAAGTTTGAATCTTCTTGAACTCTCATCTCCGTTCTCTGAAATCACAAGCAGATTTCCCAGGAACCGATACGTGCTTTGGAGGATGATGGCTTGTGCTTCACAGACGCTGATTGCTGCAAATTCATGCTCGTTTCCGAGCCATAGAGCCATGAGAAAGTCGCAGAGACTCTTCAGTCAAAATACTTCCAATCTAGTTTTAACGGTCAGAGCTTCGTCTGAAGATTCCGACTGCAATGTCGACGAATGTGCCCCAGATAAAGAGGTTAGCCGCCTTTTAATAATTCGCAATGCCTTCTGAACCGATTGAATTTTGTCTAAATCTTTTTAGGATTGATTAAAATATGTAATTCAATGTTTTAGGTGCAGCTAATTGTTCACTTATTTTGTATACTGTAATCTAATCCTTTTTAAATAGTTGTTTACCAAGAGAAATTTATTAAACAAATTTAGGGGCAACATTGATGTTCCGATTTGAAAGAGGAGGTAGGTGTTGACTGATGGGAGGGGTTGATTGAATTAGTAAGGTCGTAGGCGCGGTCGTAGTAGGTACAGTTGGTGCCGGTGGAATAATCTCTTCACCGGAAGTTCCAGAGCTTGTCACCCTTAGAAGAAATTCTTTGAAGAAGAAGCCTTGCAGCTGCGATACTATATTGTAAATGGAAGAATATAGAAGCACGTAAAGAGAAAAGCGCAGAAAAGCTCATTGAAGAGCAGTATTCATTCCTGAGAAAACTAGTGCCACATACAAGAGCTGATAGGACAACAAATAATGTAAAAGAGAACTGAAAATACAATAAAAAAATAACTGAAAGATCCGAGATAACAGAAAAGAAATACTGAAAACATATAAATGAAAAAAAATTCTTATCAGGATTTTATCTATTTGATTGATTGAATTGTAGAATTTTATTAATCTGAACTTCAATCGTACATAAACCAATTGTTCAGAAGGAAAAATATAGTCTTGAAACTTTTCATTCCACTATTTATTTGGTGCTTCTTCAGTAAAATTACTTTCCAAGTCTACGACTAGTTGTCAAGAGTTGAACCCACAGCCTTTCTTTTTTTAAGAATGAAATTATGCTTACTAGAATTAGTGGACTTGACAAAAAAAGATTTACCTAATTTTCTTTCCTTTTCTATCATAAGTTGTTTTTTTCTGGGTACTCGAGTTTGCACCTAACTCAGTGTCTATTTTGCAGCCTACTATTTGGTATGGAGATATTGCATGATAGGCACACAAGAAATTTTAAGATAATTGGTGTTGTACTAATTTGAAACTGGTACAAAATGCCTTAACGGTTCAATGCCTATTGCAATGCAGGTCGGGAAAATAAGTATGGAATGGCTAGCTGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGCGGAGAAAAGGATGGACTGGCTATGTAGAAAAGGACACTGCTGGACAAACAAACATATATTCCATTGAAGTAAGTTTGAATTTTCCAATGATTTAAGACTAAAGTTCTATTTCTGGGTTATCGGCTCTTGTAGAATTTGAATACAGGAATCTGTCTAGATAAAAAGGAAACTTGTTGCAACGTAATGCTGATACAAAACTTTATGCTCATTTATAGTAGAATTTGAATACAGAAATCAGTGTAGGCACAGTGTTTTAAAAAGTCCTCTCGAATGTGTTCCTTGGCGCAGCTAGGCTCAAGCCTAGATCTGGCACCTTGACTTGAAAAGGCGAGGCTCGGCTCACATAATAAAGTACAGCTTTTGTGAAGTCCCAAAGGCTCAAAGCTCTAAGCTTGGCCTTTTTTGTTATTTTTAAAAATTAGTAATAATTTAGCAAGTCTAAGGGCAAAATTTCTTAGGTTTAGTATCTTCATACTTTTCAACTATGTTTACTCTTCTTAATGTAGCACTTTTTTATATATAGTGCTCCTCAGTGGTTGATTGTTTCTGTTTTTTTTTAAAAAATATATACCATCGGATTCTGATCTCACCGGCTAATGTTCGGAATAGTAACTATTTTATTTATGATATTATTAAGCTTTTAAACATTGACTCTATCTATCATTTTTTAAGTTTATTTTGTAACCATTTTGTTTTTGGTTTTTCGTTTCTACAAATTAAGCCTACAAATATTCCTCTCCACCTTTATTATCGATTTTCCATCTACATTTTAACAATGTTTTAAAAAACGAAGCCAAATATTGAAAACTAAAAAGAAAAGAAGTTCTATAGAAAGTTGTTTATGTAATTTGAAATTTGACTTAAAATTCAATTTTATATTTAAAAAAGATGTAAATTATTGTAAAAAATTATGCAAACTGAGCTGACTAAAAACGAAATTGTTATAAAAGAAAAAGTGTATTTCTTAAAAAACTTTAGTTTATATTATTGCAATTTGGCTTAACTAATACGAGGAAACAAACATACTTTTCTAAAATATTAAACCAGAAACAAAATGCTTATCGATTTGAGGGAGGCACACGATTCAACTACAATTTCCTTTTTTCTTTATTTCTTTATTACTTTGTATGTTTAATAACCCTGGCTCTTTAAATTATGTGTACATACAGCCAGTAGTTTATGTAGCAGAAAGTGCTATAAGCTCCGGGACTGCAGGTTCTTCTTCTGAAGGAGCTGAGAACACACTGGCAATTGCTGGTGGAATTGCACTCATTGCGGTCGCTGTAGCTTCATCTATACTGCTTCAAGTTGGTAAGAAACCACCTGAAGTGAAGACTGTTGAATACACTGGACCCTCACTCAGTTACTATATCAATAAGTTCAATACACGAGAAATTGTCCAACCACCGGTACAAAGTGAACCCGAATCGTCCTCTCAAATTGACGGTGTCACTCCTCAAGTAACACAAATTCAAATTCAACCAGACATTCCTGCTCCTGAAGTAACGGATGTTCAAGTTGAATCCCAAACGACAGAGCCATCCTCTTCGGCCGTATCCAGTGCCTTGTAGGCTAATTGGACTAAATTTGTGTGAATTTTTTTTAGAGGTTTTACTTATATATTTATCCGTTATAAGGATATTGTACCTCAGCAATTTCCCTACAAAATGAAACATGGTGTTTGCTGATGTGTTGTTCTACAACCTGATTTTTTCTTTTGCTACAGTAGGGCCAAGTTAAATGTAGCATAAGCTTCAAATAAACTTCACCAAA ATGATGGCTTGTGCTTCACAGACGCTGATTGCTGCAAATTCATGCTCGTTTCCGAGCCATAGAGCCATGAGAAAGTCGCAGAGACTCTTCAGTCAAAATACTTCCAATCTAGTTTTAACGGTCAGAGCTTCGTCTGAAGATTCCGACTGCAATGTCGACGAATGTGCCCCAGATAAAGAGGTCGGGAAAATAAGTATGGAATGGCTAGCTGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGCGGAGAAAAGGATGGACTGGCTATGTAGAAAAGGACACTGCTGGACAAACAAACATATATTCCATTGAACCAGTAGTTTATGTAGCAGAAAGTGCTATAAGCTCCGGGACTGCAGGTTCTTCTTCTGAAGGAGCTGAGAACACACTGGCAATTGCTGGTGGAATTGCACTCATTGCGGTCGCTGTAGCTTCATCTATACTGCTTCAAGTTGGTAAGAAACCACCTGAAGTGAAGACTGTTGAATACACTGGACCCTCACTCAGTTACTATATCAATAAGTTCAATACACGAGAAATTGTCCAACCACCGGTACAAAGTGAACCCGAATCGTCCTCTCAAATTGACGGTGTCACTCCTCAAGTAACACAAATTCAAATTCAACCAGACATTCCTGCTCCTGAAGTAACGGATGTTCAAGTTGAATCCCAAACGACAGAGCCATCCTCTTCGGCCGTATCCAGTGCCTTGTAG ATGATGGCTTGTGCTTCACAGACGCTGATTGCTGCAAATTCATGCTCGTTTCCGAGCCATAGAGCCATGAGAAAGTCGCAGAGACTCTTCAGTCAAAATACTTCCAATCTAGTTTTAACGGTCAGAGCTTCGTCTGAAGATTCCGACTGCAATGTCGACGAATGTGCCCCAGATAAAGAGGTCGGGAAAATAAGTATGGAATGGCTAGCTGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGCGGAGAAAAGGATGGACTGGCTATGTAGAAAAGGACACTGCTGGACAAACAAACATATATTCCATTGAACCAGTAGTTTATGTAGCAGAAAGTGCTATAAGCTCCGGGACTGCAGGTTCTTCTTCTGAAGGAGCTGAGAACACACTGGCAATTGCTGGTGGAATTGCACTCATTGCGGTCGCTGTAGCTTCATCTATACTGCTTCAAGTTGGTAAGAAACCACCTGAAGTGAAGACTGTTGAATACACTGGACCCTCACTCAGTTACTATATCAATAAGTTCAATACACGAGAAATTGTCCAACCACCGGTACAAAGTGAACCCGAATCGTCCTCTCAAATTGACGGTGTCACTCCTCAAGTAACACAAATTCAAATTCAACCAGACATTCCTGCTCCTGAAGTAACGGATGTTCAAGTTGAATCCCAAACGACAGAGCCATCCTCTTCGGCCGTATCCAGTGCCTTGTAG MMACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKEVGKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSIEPVVYVAESAISSGTAGSSSEGAENTLAIAGGIALIAVAVASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTREIVQPPVQSEPESSSQIDGVTPQVTQIQIQPDIPAPEVTDVQVESQTTEPSSSAVSSAL*
BLAST of Csa5G626040 vs. TrEMBL
Match: A0A0A0KTT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G626040 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 3.4e-128 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Csa5G626040 vs. TrEMBL
Match: B9SHS4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621010 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75 Identity = 151/236 (63.98%), Postives = 186/236 (78.81%), Query Frame = 1
BLAST of Csa5G626040 vs. TrEMBL
Match: I1KFH6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G309000 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 4.1e-73 Identity = 151/237 (63.71%), Postives = 178/237 (75.11%), Query Frame = 1
BLAST of Csa5G626040 vs. TrEMBL
Match: A0A0B2SAI4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_017296 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 4.1e-73 Identity = 151/237 (63.71%), Postives = 178/237 (75.11%), Query Frame = 1
BLAST of Csa5G626040 vs. TrEMBL
Match: A0A067KZZ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24567 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 5.9e-72 Identity = 143/216 (66.20%), Postives = 173/216 (80.09%), Query Frame = 1
BLAST of Csa5G626040 vs. TAIR10
Match: AT5G07020.1 (AT5G07020.1 proline-rich family protein) HSP 1 Score: 242.3 bits (617), Expect = 3.1e-64 Identity = 131/232 (56.47%), Postives = 161/232 (69.40%), Query Frame = 1
BLAST of Csa5G626040 vs. NCBI nr
Match: gi|449449248|ref|XP_004142377.1| (PREDICTED: uncharacterized protein LOC101215285 [Cucumis sativus]) HSP 1 Score: 465.7 bits (1197), Expect = 4.9e-128 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Csa5G626040 vs. NCBI nr
Match: gi|659092280|ref|XP_008446990.1| (PREDICTED: uncharacterized protein LOC103489534 [Cucumis melo]) HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120 Identity = 225/235 (95.74%), Postives = 230/235 (97.87%), Query Frame = 1
BLAST of Csa5G626040 vs. NCBI nr
Match: gi|255569149|ref|XP_002525543.1| (PREDICTED: uncharacterized protein LOC8277195 [Ricinus communis]) HSP 1 Score: 291.2 bits (744), Expect = 1.7e-75 Identity = 151/236 (63.98%), Postives = 186/236 (78.81%), Query Frame = 1
BLAST of Csa5G626040 vs. NCBI nr
Match: gi|502127691|ref|XP_004499800.1| (PREDICTED: uncharacterized protein LOC101500231 [Cicer arietinum]) HSP 1 Score: 289.3 bits (739), Expect = 6.3e-75 Identity = 149/233 (63.95%), Postives = 183/233 (78.54%), Query Frame = 1
BLAST of Csa5G626040 vs. NCBI nr
Match: gi|571462757|ref|XP_006582374.1| (PREDICTED: uncharacterized protein LOC100803864 isoform X1 [Glycine max]) HSP 1 Score: 282.7 bits (722), Expect = 5.9e-73 Identity = 151/237 (63.71%), Postives = 178/237 (75.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |