Lsi04G000070 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G000070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Proline-rich family protein
Location	chr04 : 81771 .. 84311 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTCTTAAGATTGGAATGTTTTACTATACCTGTATTTGGGGACAGAAAACTATTATCAAAACGGACCAACAGTATACGGACACGTAGTCCTTCCAGATCCCACTCAATTCCGACGCCACAAAACGGTCATCCAATGTAAAAATATCTCGTCTATCCCCTAAACCCTGAGGACAACCAGTTTGAATCTTCTCGAACTCTCTCATCTCCTTTCTCTGAAGTCCAAAGCAGTTTGAGTTTTCCCACGAATCGATACGTGCTTCGGAGGAATGATGGCTTGTGCTTCCCAGGCGCTGATTGCTGCAAATTCATGCTCGTTTCCGAGCCACAGAGTCATTAGAAAGTCTCAGAGATTCTTCAATCAAAGTGCTTTCAATCTAGTTTTCACGGTCAGAGCTTCATCTGAAGATTCCGACTGCAATGTCGACGAATGTGCTCCAGATAAAGAGGTTGGTCCGTTTTTTCGTTGTAAATAATTCGCAATGCCTTCGGGACCGATTGAATTTCGTCTTAATATTGCTATAATGGATTAGAATATGTGATTCAATGTTTTAGGTGCAGCTAATTGTTCGCTTCCTTTGTATACTGTAATCCATTCATTGTTAAATTGTTGTTTACCAAGAAAATTTTATTAAACTACGTGCTTTGTGTTTATCAATTTGATTGATTGAATTGTAGAATTTTTATAATTTGAACTTCAATCACACTTAAACCAACTGTTTTGGCAGGAAAAGTATAGTTTTGAGACTCAAATTGGAATAAACTAGATTTACGATTCCACTATTGATTTGAGGCTTCTGTAAAATTAGTTTCCAAGTCCAGAACTAGTTGTCAAGAGTTGAACACGCGACTTTCCTTCTTTTGAAGAATGAACTTATGCTTATGACTAAATATATTTGATTTTACAGCGTACTATTGGGTGTGGAGATATTGCATGATAGGCACACCAGAAATTTTAAGATATTCGTGTTGTACTAATTTGAAACTGATACAAAAAGCCTAACAGTTCAATGCCTATTGCAATCCAGGTGGGTAAAATAAGTATGGAATGGCTAGCTGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGAGGAAAAAAGGGTGGACTGGCTATGTAGAGAAGGACACTGCAGGACAAACAAATATATATTCCGTTGAAGTAAGTATGAACTTTACAATGATTGAGTATCAAAGTTCTATTTCAGGATCATCTGCTCTTGCGAATGTCTGGATAAAAAGGAAACTTCTTGTAATGTAAGGCTTATACAGACGCTTTATGCTCATCTGTACTAAAATTTGAATACAGGGATTGGCGTTCATTTGATCTAGTTAAGCTGTATGATTCTGTTTCTGAAGGTTTTAGCAGCCAAATTTTAGTAGTTGTATTGTGCATGTCTGTTTTCATGAATTGATGCCCTTTCACGATCACTTTCAATGAGAACGCGATTTTTTTTTTATTATTATTTTATCATTGAGTAATTGAGATAACAAGATATTTCCATTTTATCTGGTTGTGTTGTGTGGAGATATTTCCATTTTATCTTCGGTGATTGATTGTTTCTGATTTACCTTTTTTTTTTCTTTTTGGAAAGATGTATCATAAATTATAATCTCACCAGCTAAGGTCCCGATTTGTAAAACAAAGTCAAATTTTGAAAAACATGTATGTTTTTGAAAAACTTGATTTTGTTATTGGAATTTGACTTACCAAAAAGCTTACTAAACAAAATGCGAGGAAACCGTCATAATTTTCAAAAGATAGAAAACCAAAAATAAGATGGTCATCAACTAGAATGGGGTGTTAAATTACACTTCCTTTTTACTTTCTTTTTTTATTACTTTGGATGTTTAATCACCCTGGCACCTTAAATTGTGTGCACTTGCAGCCAGTAGTTTATGTGGCTGAAAGTGCTATAAGCTCGGGGACTGCAGGTTCTTCTTCTGAAGGAGCTGAGAACACACTGGCAATTGCTGGTGGAATTGCACTCATTGCGGTTGCTGCAGCTTCATCTATACTGCTTCAAGTTGGTAAGAAACCACCTGAAGTGAAAACCGTTGAATACACTGGACCCTCACTCAGTTACTATATTAACAAGTTCAGTGCACGAGAAATTGTCCAACCACCGGTTCAAAGTAAACCCGAATTGTCCTCTCAAGTTGACGGCGTCGCTTCTGAAGTAACAGAGATTCAAATTCAATCAGACATTGCTGCTCCTGAAGTAATGGATATTCAAGTTGAATCTCGAACGACAGAGCCGTCCTCTTCGGCTGTAGCCAGTGTCTCGTAAGCTTATTGAACCAAATTCATGTCAATTTTTTTACAGGTTTTACTTCTGTATTTATCTGTTATATAAATATTGGTCCTCAGCAATTACACGACAAATTCAAGCATGATGTTTGCTGATGTGTTGTACTGCATCCCCTTTTTTCTCTTGTTGCAGTTGGGGTAGTTAAGAAAAGATGAGGCTTGAATCAGTTAAATGTATGTAAACGTAAATTTTAAATAAACTTCACGTATCTTGTTTTGAGCTGTGGAAA

mRNA sequence

AAATTCTTAAGATTGGAATGTTTTACTATACCTGTATTTGGGGACAGAAAACTATTATCAAAACGGACCAACAGTATACGGACACGTAGTCCTTCCAGATCCCACTCAATTCCGACGCCACAAAACGGTCATCCAATGTAAAAATATCTCGTCTATCCCCTAAACCCTGAGGACAACCAGTTTGAATCTTCTCGAACTCTCTCATCTCCTTTCTCTGAAGTCCAAAGCAGTTTGAGTTTTCCCACGAATCGATACGTGCTTCGGAGGAATGATGGCTTGTGCTTCCCAGGCGCTGATTGCTGCAAATTCATGCTCGTTTCCGAGCCACAGAGTCATTAGAAAGTCTCAGAGATTCTTCAATCAAAGTGCTTTCAATCTAGTTTTCACGGTCAGAGCTTCATCTGAAGATTCCGACTGCAATGTCGACGAATGTGCTCCAGATAAAGAGGTGGGTAAAATAAGTATGGAATGGCTAGCTGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGAGGAAAAAAGGGTGGACTGGCTATGTAGAGAAGGACACTGCAGGACAAACAAATATATATTCCGTTGAACCAGTAGTTTATGTGGCTGAAAGTGCTATAAGCTCGGGGACTGCAGGTTCTTCTTCTGAAGGAGCTGAGAACACACTGGCAATTGCTGGTGGAATTGCACTCATTGCGGTTGCTGCAGCTTCATCTATACTGCTTCAAGTTGGTAAGAAACCACCTGAAGTGAAAACCGTTGAATACACTGGACCCTCACTCAGTTACTATATTAACAAGTTCAGTGCACGAGAAATTGTCCAACCACCGGTTCAAAGTAAACCCGAATTGTCCTCTCAAGTTGACGGCGTCGCTTCTGAAGTAACAGAGATTCAAATTCAATCAGACATTGCTGCTCCTGAAGTAATGGATATTCAAGTTGAATCTCGAACGACAGAGCCGTCCTCTTCGGCTGTAGCCAGTGTCTCGTAAGCTTATTGAACCAAATTCATGTCAATTTTTTTACAGGTTTTACTTCTGTATTTATCTGTTATATAAATATTGGTCCTCAGCAATTACACGACAAATTCAAGCATGATGTTTGCTGATGTGTTGTACTGCATCCCCTTTTTTCTCTTGTTGCAGTTGGGGTAGTTAAGAAAAGATGAGGCTTGAATCAGTTAAATGTATGTAAACGTAAATTTTAAATAAACTTCACGTATCTTGTTTTGAGCTGTGGAAA

Coding sequence (CDS)

ATGATGGCTTGTGCTTCCCAGGCGCTGATTGCTGCAAATTCATGCTCGTTTCCGAGCCACAGAGTCATTAGAAAGTCTCAGAGATTCTTCAATCAAAGTGCTTTCAATCTAGTTTTCACGGTCAGAGCTTCATCTGAAGATTCCGACTGCAATGTCGACGAATGTGCTCCAGATAAAGAGGTGGGTAAAATAAGTATGGAATGGCTAGCTGGGGAGAAAACTAAAGTGGTTGGGACATACCCACCGAGGAAAAAAGGGTGGACTGGCTATGTAGAGAAGGACACTGCAGGACAAACAAATATATATTCCGTTGAACCAGTAGTTTATGTGGCTGAAAGTGCTATAAGCTCGGGGACTGCAGGTTCTTCTTCTGAAGGAGCTGAGAACACACTGGCAATTGCTGGTGGAATTGCACTCATTGCGGTTGCTGCAGCTTCATCTATACTGCTTCAAGTTGGTAAGAAACCACCTGAAGTGAAAACCGTTGAATACACTGGACCCTCACTCAGTTACTATATTAACAAGTTCAGTGCACGAGAAATTGTCCAACCACCGGTTCAAAGTAAACCCGAATTGTCCTCTCAAGTTGACGGCGTCGCTTCTGAAGTAACAGAGATTCAAATTCAATCAGACATTGCTGCTCCTGAAGTAATGGATATTCAAGTTGAATCTCGAACGACAGAGCCGTCCTCTTCGGCTGTAGCCAGTGTCTCGTAA

Protein sequence

MMACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEVGKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAGSSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSAREIVQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESRTTEPSSSAVASVS

Homology

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BLAST of Lsi04G000070 vs. TrEMBL
Match: A0A0A0KTT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G626040 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.0e-109
Identity = 209/236 (88.56%), Postives = 222/236 (94.07%), Query Frame = 1


Query: 1   MMACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKE 60
           MMACASQ LIAANSCSFPSHR +RKSQR F+Q+  NLV TVRASSEDSDCNVDECAPDKE
Sbjct: 1   MMACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKE 60

Query: 61  VGKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTA 120
           VGKISMEWLAGEKTKVVGTYPPR+KGWTGYVEKDTAGQTNIYS+EPVVYVAESAISSGTA
Sbjct: 61  VGKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSIEPVVYVAESAISSGTA 120

Query: 121 GSSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSARE 180
           GSSSEGAENTLAIAGGIALIAVA ASSILLQVGKKPPEVKTVEYTGPSLSYYINKF+ RE
Sbjct: 121 GSSSEGAENTLAIAGGIALIAVAVASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTRE 180

Query: 181 IVQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESRTTEPSSSAVAS 237
           IVQPPVQS+PE SSQ+DGV  +VT+IQIQ DI APEV D+QVES+TTEPSSSAV+S
Sbjct: 181 IVQPPVQSEPESSSQIDGVTPQVTQIQIQPDIPAPEVTDVQVESQTTEPSSSAVSS 236

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BLAST of Lsi04G000070 vs. TrEMBL
Match: B9SHS4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621010 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.4e-72
Identity = 155/238 (65.13%), Postives = 187/238 (78.57%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEV 61
           MACAS+A+I AN+C+F S R  +K Q F  +S    +FT+RA ++D+DCN +ECAPDKEV
Sbjct: 1   MACASRAMITANTCTFTSPRFFKKYQTFNRRSL--KLFTIRAETDDADCNDEECAPDKEV 60

Query: 62  GKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 121
           GK+SMEWLAG+KTKV GT+PPR +GWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 61  GKVSMEWLAGDKTKVAGTFPPRTRGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120

Query: 122 SSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSAREI 181
           SS++GAENT AIA GIALI+VAAASSILLQVGK P E+KTVEY+GPSL+YYINKF   EI
Sbjct: 121 SSADGAENTAAIAAGIALISVAAASSILLQVGKTPAEIKTVEYSGPSLTYYINKFKPAEI 180

Query: 182 VQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESRT-TEPSSSAVASVS 239
           VQ  + S+ E S            IQ+  + +APEV  IQV+S+   EP++S+  SVS
Sbjct: 181 VQAALPSQTESS----------PSIQLPPESSAPEVSQIQVQSQVQPEPATSSENSVS 226

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BLAST of Lsi04G000070 vs. TrEMBL
Match: A0A067KZZ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24567 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.0e-69
Identity = 154/239 (64.44%), Postives = 187/239 (78.24%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEV 61
           MACASQA+I+AN+C+F S R+ +K  R  N+      FT+RASS+D DCN +ECAPDKEV
Sbjct: 1   MACASQAMISANTCAFSSPRLFKK-YRSLNRRNLK-TFTLRASSDDPDCNDEECAPDKEV 60

Query: 62  GKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 121
           GK+S+EWLAG+KTKVVGT+PPR +GWTGYVEKDTAGQTNIYSVEP VYVAESAISSG AG
Sbjct: 61  GKVSVEWLAGDKTKVVGTFPPRTRGWTGYVEKDTAGQTNIYSVEPTVYVAESAISSGNAG 120

Query: 122 SSSEGAENTLAIAGGIALIAVAAASSILLQVGK-KPPEVKTVEYTGPSLSYYINKFSARE 181
           SSS+GAENT AIAGG+ALIAVAAASSIL+QVGK +P +V+TVEY+GPSLSYYINKF   E
Sbjct: 121 SSSDGAENTAAIAGGLALIAVAAASSILIQVGKNEPVQVQTVEYSGPSLSYYINKFKPPE 180

Query: 182 IVQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESR-TTEPSSSAVASVS 239
           IV+  V S+ E +  V            QS+ +APEV  ++V+S+   EP SS+  S+S
Sbjct: 181 IVEAAVPSQLEPAPSV------------QSETSAPEVPQMEVQSQLQAEPPSSSENSIS 225

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BLAST of Lsi04G000070 vs. TrEMBL
Match: A0A151SWB2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_014494 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.0e-68
Identity = 142/215 (66.05%), Postives = 176/215 (81.86%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEV 61
           MACA QA +AAN+C+F S R   K Q    +     +FTVRA+S+D DCN +ECAPDKEV
Sbjct: 1   MACALQATLAANTCAFSSRRFSLKHQNTSKRRF--CLFTVRAASDDPDCNEEECAPDKEV 60

Query: 62  GKISMEWLAGEKTKVVGTYPPRKK-GWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTA 121
           GK+SMEWLAG+KTKVVGTYPPR+K GWTGYVEKDTAGQTNIYSVEP VYVAESAISSGTA
Sbjct: 61  GKVSMEWLAGDKTKVVGTYPPRRKPGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTA 120

Query: 122 GSSSEGAENTLAIAGGIALIAVAAASSILLQVGKK-PPEVKTVEYTGPSLSYYINKFSAR 181
           GSSS+GAENT AI  G+ALI+VAAASS+LLQVGK  PP+++T +Y+GPSL+YYINKF   
Sbjct: 121 GSSSDGAENTAAIVAGLALISVAAASSVLLQVGKNAPPQIQTAQYSGPSLTYYINKFKPP 180

Query: 182 EIVQPPVQSKPELSSQV--DGVASEVTEIQIQSDI 213
           EI++  V S+ ELSS V  +  +SEV+++Q+++++
Sbjct: 181 EIIEASVPSEAELSSPVKPESSSSEVSQVQVEAEV 213

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BLAST of Lsi04G000070 vs. TrEMBL
Match: A0A061FRT1_THECC (Proline-rich family protein OS=Theobroma cacao GN=TCM_044749 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.2e-68
Identity = 139/212 (65.57%), Postives = 174/212 (82.08%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSD-CNVDECAPDKE 61
           MACASQA+I+ANSC+F S ++ +K     N+++F   FTVRASS+DSD CN +ECAPDKE
Sbjct: 1   MACASQAMISANSCAFTSPKLFKKCYELNNKTSF---FTVRASSDDSDDCNEEECAPDKE 60

Query: 62  VGKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTA 121
           VGK+S+EWLAG+KTKVVGTYPPR++GWTGYVEKDTAGQTNIYSVEP VY+AESAISSG A
Sbjct: 61  VGKVSVEWLAGDKTKVVGTYPPRRRGWTGYVEKDTAGQTNIYSVEPAVYIAESAISSGVA 120

Query: 122 GSSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSARE 181
           GSS++GA++TLAI  GIAL+ VAAAS+++LQVG+  P+VKT EYTGP+LSYYINKF   E
Sbjct: 121 GSSADGAKSTLAINAGIALVFVAAASAVVLQVGRNSPQVKTAEYTGPALSYYINKFKPPE 180

Query: 182 IVQPPVQSKPELSSQV--DGVASEVTEIQIQS 211
           I+Q    S  E  S V  +  A EV+++++QS
Sbjct: 181 IIQATAPSLTESPSSVLPESSAPEVSQVEVQS 209

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BLAST of Lsi04G000070 vs. TAIR10
Match: AT5G07020.1 (AT5G07020.1 proline-rich family protein)

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59
Identity = 138/238 (57.98%), Postives = 165/238 (69.33%), Query Frame = 1


Query: 6   SQALIAANSCSFPSHRVIRKSQRFFNQSAFN--LVFTV-RASSEDSDCNVDECAPDKEVG 65
           S  L++ N   F S + +    RF N  +    L F+V RASS+D+DCN +ECAP+KEVG
Sbjct: 2   SNVLLSPNGYVFASPKPLG---RFINSKSGGRKLFFSVVRASSDDADCNAEECAPEKEVG 61

Query: 66  KISMEWLAGEKTKVVGTYPPRK-KGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 125
            +SMEWLAGEKTKVVGT+PPRK +GWTGYVEKDTAGQTN+YS+EP VYVAESAISSGTAG
Sbjct: 62  TVSMEWLAGEKTKVVGTFPPRKPRGWTGYVEKDTAGQTNVYSIEPAVYVAESAISSGTAG 121

Query: 126 SSSEGAENTLAIAGGIALIAVAAASSILLQVGK-KPPEVKTVEYTGPSLSYYINKFSARE 185
           SS++GAENT AI  GIALIAVAAASSILLQVGK  P   K V+Y+GPSLSYYINKF   E
Sbjct: 122 SSADGAENTAAIVAGIALIAVAAASSILLQVGKDAPTRPKAVDYSGPSLSYYINKFKPSE 181

Query: 186 IVQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESRTTEPSSSAVASVS 239
           IVQP   S  E       VA   T +     +A  E    +  +   +P +S+V + S
Sbjct: 182 IVQPSTPSVTE----APPVAELETSLPETPSVAQQETSLPETMASEAQPEASSVPTTS 232

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BLAST of Lsi04G000070 vs. NCBI nr
Match: gi|449449248|ref|XP_004142377.1| (PREDICTED: uncharacterized protein LOC101215285 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 8.6e-109
Identity = 209/236 (88.56%), Postives = 222/236 (94.07%), Query Frame = 1


Query: 1   MMACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKE 60
           MMACASQ LIAANSCSFPSHR +RKSQR F+Q+  NLV TVRASSEDSDCNVDECAPDKE
Sbjct: 1   MMACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKE 60

Query: 61  VGKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTA 120
           VGKISMEWLAGEKTKVVGTYPPR+KGWTGYVEKDTAGQTNIYS+EPVVYVAESAISSGTA
Sbjct: 61  VGKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSIEPVVYVAESAISSGTA 120

Query: 121 GSSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSARE 180
           GSSSEGAENTLAIAGGIALIAVA ASSILLQVGKKPPEVKTVEYTGPSLSYYINKF+ RE
Sbjct: 121 GSSSEGAENTLAIAGGIALIAVAVASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTRE 180

Query: 181 IVQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESRTTEPSSSAVAS 237
           IVQPPVQS+PE SSQ+DGV  +VT+IQIQ DI APEV D+QVES+TTEPSSSAV+S
Sbjct: 181 IVQPPVQSEPESSSQIDGVTPQVTQIQIQPDIPAPEVTDVQVESQTTEPSSSAVSS 236

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BLAST of Lsi04G000070 vs. NCBI nr
Match: gi|659092280|ref|XP_008446990.1| (PREDICTED: uncharacterized protein LOC103489534 [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-107
Identity = 214/237 (90.30%), Postives = 222/237 (93.67%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEV 61
           MACASQ LIAANSCSFPSHR +RKSQR F+Q+  NLV TVRASSEDSDCNVDECAPDKEV
Sbjct: 1   MACASQTLIAANSCSFPSHRAMRKSQRLFSQNTSNLVLTVRASSEDSDCNVDECAPDKEV 60

Query: 62  GKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 121
           GKISMEWLAGEKTKVVGTYPPR+KGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 61  GKISMEWLAGEKTKVVGTYPPRRKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120

Query: 122 SSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSAREI 181
           SSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKF+ REI
Sbjct: 121 SSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFNTREI 180

Query: 182 VQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESRTTEPSSSAVASVS 239
           VQ PVQS+PE SSQVDGV  EVTEIQ QSDI APEV DIQVES+TT PSSSAV+SVS
Sbjct: 181 VQ-PVQSEPESSSQVDGVTPEVTEIQSQSDIPAPEVTDIQVESQTTAPSSSAVSSVS 236

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BLAST of Lsi04G000070 vs. NCBI nr
Match: gi|255569149|ref|XP_002525543.1| (PREDICTED: uncharacterized protein LOC8277195 [Ricinus communis])

HSP 1 Score: 279.6 bits (714), Expect = 4.9e-72
Identity = 155/238 (65.13%), Postives = 187/238 (78.57%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEV 61
           MACAS+A+I AN+C+F S R  +K Q F  +S    +FT+RA ++D+DCN +ECAPDKEV
Sbjct: 1   MACASRAMITANTCTFTSPRFFKKYQTFNRRSL--KLFTIRAETDDADCNDEECAPDKEV 60

Query: 62  GKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 121
           GK+SMEWLAG+KTKV GT+PPR +GWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG
Sbjct: 61  GKVSMEWLAGDKTKVAGTFPPRTRGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 120

Query: 122 SSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSAREI 181
           SS++GAENT AIA GIALI+VAAASSILLQVGK P E+KTVEY+GPSL+YYINKF   EI
Sbjct: 121 SSADGAENTAAIAAGIALISVAAASSILLQVGKTPAEIKTVEYSGPSLTYYINKFKPAEI 180

Query: 182 VQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESRT-TEPSSSAVASVS 239
           VQ  + S+ E S            IQ+  + +APEV  IQV+S+   EP++S+  SVS
Sbjct: 181 VQAALPSQTESS----------PSIQLPPESSAPEVSQIQVQSQVQPEPATSSENSVS 226

[Close]

BLAST of Lsi04G000070 vs. NCBI nr
Match: gi|502127691|ref|XP_004499800.1| (PREDICTED: uncharacterized protein LOC101500231 [Cicer arietinum])

HSP 1 Score: 275.0 bits (702), Expect = 1.2e-70
Identity = 150/233 (64.38%), Postives = 185/233 (79.40%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEV 61
           MAC  QA IAAN+C+F + R   K ++  ++ + + +F VRASS++SDCN +ECAPDKEV
Sbjct: 1   MACTLQATIAANTCTFSTRRFSMKHKKIISKRS-SCMFIVRASSDESDCNDEECAPDKEV 60

Query: 62  GKISMEWLAGEKTKVVGTYPPRKK-GWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTA 121
           GK+SMEWLA EKTKVVGTYPPR+K GWTGYVEKDTAGQTNIYSVEP VYVAESAISSGTA
Sbjct: 61  GKVSMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTA 120

Query: 122 GSSSEGAENTLAIAGGIALIAVAAASSILLQVGKKPPEVKTVEYTGPSLSYYINKFSARE 181
           GSSS+GA+NT AIA G+ALI++AAASSILLQVGKKPP+V+T EY+GPSLSYYINKF   E
Sbjct: 121 GSSSDGAQNTAAIAAGLALISIAAASSILLQVGKKPPQVQTPEYSGPSLSYYINKFVPPE 180

Query: 182 IVQPPVQSKPELSSQVDGVASEV-TEIQIQSDIAAPEVMDIQVESRTTEPSSS 233
           I Q P  ++ ELSS V   +SE    + +Q + ++ +V  +QVES+    +SS
Sbjct: 181 ITQAPAPTETELSSPVQLESSETEASLSVQPETSSEQVSQVQVESQIQAEASS 232

[Close]

BLAST of Lsi04G000070 vs. NCBI nr
Match: gi|802574223|ref|XP_012068724.1| (PREDICTED: uncharacterized protein LOC105631266 [Jatropha curcas])

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 154/239 (64.44%), Postives = 187/239 (78.24%), Query Frame = 1


Query: 2   MACASQALIAANSCSFPSHRVIRKSQRFFNQSAFNLVFTVRASSEDSDCNVDECAPDKEV 61
           MACASQA+I+AN+C+F S R+ +K  R  N+      FT+RASS+D DCN +ECAPDKEV
Sbjct: 1   MACASQAMISANTCAFSSPRLFKK-YRSLNRRNLK-TFTLRASSDDPDCNDEECAPDKEV 60

Query: 62  GKISMEWLAGEKTKVVGTYPPRKKGWTGYVEKDTAGQTNIYSVEPVVYVAESAISSGTAG 121
           GK+S+EWLAG+KTKVVGT+PPR +GWTGYVEKDTAGQTNIYSVEP VYVAESAISSG AG
Sbjct: 61  GKVSVEWLAGDKTKVVGTFPPRTRGWTGYVEKDTAGQTNIYSVEPTVYVAESAISSGNAG 120

Query: 122 SSSEGAENTLAIAGGIALIAVAAASSILLQVGK-KPPEVKTVEYTGPSLSYYINKFSARE 181
           SSS+GAENT AIAGG+ALIAVAAASSIL+QVGK +P +V+TVEY+GPSLSYYINKF   E
Sbjct: 121 SSSDGAENTAAIAGGLALIAVAAASSILIQVGKNEPVQVQTVEYSGPSLSYYINKFKPPE 180

Query: 182 IVQPPVQSKPELSSQVDGVASEVTEIQIQSDIAAPEVMDIQVESR-TTEPSSSAVASVS 239
           IV+  V S+ E +  V            QS+ +APEV  ++V+S+   EP SS+  S+S
Sbjct: 181 IVEAAVPSQLEPAPSV------------QSETSAPEVPQMEVQSQLQAEPPSSSENSIS 225

The following BLAST results are available for this feature:

BLAST of Lsi04G000070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi04G000070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTT1_CUCSA	6.0e-109	88.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G626040 PE=4 SV=1	[more]
B9SHS4_RICCO	3.4e-72	65.13	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621010 PE=4 SV=1	[more]
A0A067KZZ4_JATCU	8.0e-69	64.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24567 PE=4 SV=1	[more]
A0A151SWB2_CAJCA	3.0e-68	66.05	Uncharacterized protein OS=Cajanus cajan GN=KK1_014494 PE=4 SV=1	[more]
A0A061FRT1_THECC	5.2e-68	65.57	Proline-rich family protein OS=Theobroma cacao GN=TCM_044749 PE=4 SV=1	[more]

BLAST of Lsi04G000070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07020.1	1.3e-59	57.98	proline-rich family protein	[more]

BLAST of Lsi04G000070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449248\|ref\|XP_004142377.1\|	8.6e-109	88.56	PREDICTED: uncharacterized protein LOC101215285 [Cucumis sativus]	[more]
gi\|659092280\|ref\|XP_008446990.1\|	1.6e-107	90.30	PREDICTED: uncharacterized protein LOC103489534 [Cucumis melo]	[more]
gi\|255569149\|ref\|XP_002525543.1\|	4.9e-72	65.13	PREDICTED: uncharacterized protein LOC8277195 [Ricinus communis]	[more]
gi\|502127691\|ref\|XP_004499800.1\|	1.2e-70	64.38	PREDICTED: uncharacterized protein LOC101500231 [Cicer arietinum]	[more]
gi\|802574223\|ref\|XP_012068724.1\|	1.1e-68	64.44	PREDICTED: uncharacterized protein LOC105631266 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0008150	biological_process
biological_process	GO:0061635	regulation of protein complex stability
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G000070.1	Lsi04G000070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35753	FAMILY NOT NAMED	coord: 1..232 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G000070	Cla009919	Watermelon (97103) v1	lsiwmB320
Lsi04G000070	MELO3C012494	Melon (DHL92) v3.5.1	lsimeB281
Lsi04G000070	ClCG05G027000	Watermelon (Charleston Gray)	lsiwcgB291
Lsi04G000070	MELO3C012494.2	Melon (DHL92) v3.6.1	lsimedB297
Lsi04G000070	Cla97C05G109230	Watermelon (97103) v2	lsiwmbB292
Lsi04G000070	Bhi07G001003	Wax gourd	lsiwgoB383
Lsi04G000070	Cp4.1LG01g09680	Cucurbita pepo (Zucchini)	cpelsiB352
Lsi04G000070	CsGy5G027240	Cucumber (Gy14) v2	cgyblsiB337
Lsi04G000070	Carg02009	Silver-seed gourd	carlsiB767
Lsi04G000070	CsaV3_5G036960	Cucumber (Chinese Long) v3	cuclsiB393

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G000070	Cucumber (Gy14) v1	cgylsiB497
Lsi04G000070	Cucurbita maxima (Rimu)	cmalsiB379
Lsi04G000070	Cucurbita maxima (Rimu)	cmalsiB669
Lsi04G000070	Cucurbita moschata (Rifu)	cmolsiB364
Lsi04G000070	Cucurbita pepo (Zucchini)	cpelsiB032
Lsi04G000070	Wild cucumber (PI 183967)	cpilsiB372
Lsi04G000070	Cucumber (Chinese Long) v2	culsiB368
Lsi04G000070	Silver-seed gourd	carlsiB664