Carg01845 (gene) Silver-seed gourd

Overview
NameCarg01845
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description50S ribosomal protein L15, putative
LocationCucurbita_argyrosperma_scaffold_003 : 724891 .. 726662 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGGAACAGAACCACAATTGTAAATACCGACTCCCAGTTTATCCATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCCTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTCCCTTCAAGGTAATTTAAATTCCAGACGTTATCTCATTTCAATTTTCTTGCACGTCGATTCTTTTATCATTTACGGAACTCTGATTCACATACATTTCCAGGGAAATGTGAAGATTCTGAATTCAAAGCAGTTCAGCTTTTCTCCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCCCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTAATTTCTATCATTCTGCTACTTCCCTTTTGTATTTGAATTATACAACTCTAGTATCTGGCTGGTAGGCGTCCGCAATGGCTAATTTCGGCTAGTAGTTGTGGTTGCTTCATTGAGGGAGAGTTCTAATTATCCTTTCTATCTTATCTTGAATACTTCCATTCATTGCTCACACTCTTTACCCCTTAATTTCTTTTAACCTTCTTAGTACACGGTGGTTGTTGGAGAAATTGCGATTGCTAATAGTTGTTTGTATTGATTGTACTCGTATTTGTGTAGTTCCTTATTCCTTGATCTAGCACATTCGGCCTTGTTAGATTTTAGGAGACTAGGACAATGGAGAAAAGCAGTCACTCTATAATCTGATGTCCTTCTCCTGGTTCTTTTCAAGATGATATAGTTCGTATTACATTCGTATGAACTTATGATATTGAAGCCGAACAATTTCTTTTCCTTTGCAAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTGAAGGTACTAATGTCACGAGTATCTTCATTGTGAAGATTACATATCAAAATTGACATGCTGCTCTTTCCTGCTCCAAGAAGTGAAACCAAAACTGAATGATTTAAACAGATGTTTCTTAACTCATCAAGATTTTGGTATCTGATTCTTACTGTCTTAACTTCGTCTTTCCTTCAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCGTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCCGTTGGCTGTTCCCTTACTGTATTACCTGGACGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCGAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGATTCCAAAATTGCGGTTGGTGACAAATTCCAGGTTAAATCTCCTCCCCAGTAATTTTGGGCCTTAGAGCTAATTTGTGGGCATTAAGTCCAATTTCACATAGTTGTCTGATTGTATTGATGATTGATTTTCAAGTGCAAAATTTTCTCTCTGAAGATGTTGACGCTCTCTTTTACTTATATTAAATTACCATAACAATT

mRNA sequence

AGGGGAACAGAACCACAATTGTAAATACCGACTCCCAGTTTATCCATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCCTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTCCCTTCAAGGGAAATGTGAAGATTCTGAATTCAAAGCAGTTCAGCTTTTCTCCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCCCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTGAAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCGTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCCGTTGGCTGTTCCCTTACTGTATTACCTGGACGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCGAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGATTCCAAAATTGCGGTTGGTGACAAATTCCAGGTTAAATCTCCTCCCCAGTAATTTTGGGCCTTAGAGCTAATTTGTGGGCATTAAGTCCAATTTCACATAGTTGTCTGATTGTATTGATGATTGATTTTCAAGTGCAAAATTTTCTCTCTGAAGATGTTGACGCTCTCTTTTACTTATATTAAATTACCATAACAATT

Coding sequence (CDS)

ATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCCTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTCCCTTCAAGGGAAATGTGAAGATTCTGAATTCAAAGCAGTTCAGCTTTTCTCCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCCCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTGAAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCGTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCCGTTGGCTGTTCCCTTACTGTATTACCTGGACGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCGAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGA

Protein sequence

MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD
Homology
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BLAST of Carg01845 vs. NCBI nr
Match: XP_022956924.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 500.7 bits (1288), Expect = 3.0e-138
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 268
           SVAKNLARADEYFAKKRAAAAAAEQAD
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 267

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BLAST of Carg01845 vs. NCBI nr
Match: XP_022984826.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 494.6 bits (1272), Expect = 2.1e-136
Identity = 265/267 (99.25%), Postives = 265/267 (99.25%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTT FKGNVKILNSKQFSFS LKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 268
           SVAKNLARADEYFAKKRAAAAAAEQAD
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQAD 267

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BLAST of Carg01845 vs. NCBI nr
Match: XP_023521047.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477.2 bits (1227), Expect = 3.5e-131
Identity = 252/255 (98.82%), Postives = 253/255 (99.22%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60
           MAALLSLSSSSLTRTAIALPHPTT FKGNVK+LNSKQFSFS LKLKFKVGDGKPLVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKVLNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAK 256
           SVAKNLARADEYFAK
Sbjct: 241 SVAKNLARADEYFAK 255

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BLAST of Carg01845 vs. NCBI nr
Match: XP_004135093.1 (PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypothetical protein Csa_5G609730 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 4.9e-117
Identity = 229/252 (90.87%), Postives = 235/252 (93.25%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS SLTRTA ALP+PTT FKGNV ILNSK  S S L+LK K  DGK LVVR+Q
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEY 253
           SVAKNLARA+EY
Sbjct: 241 SVAKNLARAEEY 252

[Close]
BLAST of Carg01845 vs. NCBI nr
Match: XP_022968128.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima] >XP_022968129.1 50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima] >XP_022968130.1 50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 426.8 bits (1096), Expect = 5.5e-116
Identity = 229/266 (86.09%), Postives = 240/266 (90.23%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60
           MAA LSLSS SLTRTA  LPH TT FKGNV++LNS  F+    +LKF V DGK LVVRSQ
Sbjct: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAA+SLSAS  ESVRFRLDNLGPQ GSRKK KRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAAASLSASSGESVRFRLDNLGPQSGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VR+GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGE+V+LE+LKEK
Sbjct: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GC+LTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK      AEQA
Sbjct: 241 SVAKNLARAEEYFAKKXXXXXXAEQA 266

[Close]
BLAST of Carg01845 vs. TAIR10
Match: AT3G25920.1 (ribosomal protein L15)

HSP 1 Score: 335.1 bits (858), Expect = 3.9e-92
Identity = 191/274 (69.71%), Postives = 215/274 (78.47%), Query Frame = 0 

Query: 1   MAALLSLSSSSLT-RTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGD------GK 60
           MA  LS+SS+ LT R    L   +T FKGNV +L +       LKL   +         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  PLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120
           PLVV SQ AA+  S++ V   RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAAT--SSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD 268
           RKKWVKPSVAKN ARADEYFAKKRAAAA A  ++
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSE 272

[Close]
BLAST of Carg01845 vs. TAIR10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 6.6e-07
Identity = 57/185 (30.81%), Postives = 93/185 (50.27%), Query Frame = 0 

Query: 53  KPLVVRSQAAASSLSASPVESVR-FRLDNLGPQQGS--RKKGKRKGRGISAGQGGSCGFG 112
           +P  + +Q   S+  A   + +R + L +L   + +  RK   RKGRGI      + G G
Sbjct: 37  RPSPISTQIPTSTSRALSFQGIRAYSLLSLNDLRDNVPRKLKTRKGRGIGXXXXXTAGRG 96

Query: 113 MRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL----KDIEAAG 172
            +GQK+R    ++ GFEGGQ PL RR+PK RG           + PV L    K I A  
Sbjct: 97  HKGQKARG--TMKFGFEGGQTPLRRRLPK-RGFKNKFKL---HFQPVGLGKIAKLINAGK 156

Query: 173 FQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELSVK--LNIKARAFSSAAKEKLEA 229
               E +++++LK+ G I   G++ +  ++++  G   +K  L+ +    +  AKE +EA
Sbjct: 157 IDSHELITMKTLKDVGAI---GKQIEDGVRLMGRGADDIKWPLHFEVSRVTVRAKEVVEA 212

[Close]
BLAST of Carg01845 vs. Swiss-Prot
Match: sp|P22798|RK15_SPIOL (50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 PE=1 SV=3)

HSP 1 Score: 340.5 bits (872), Expect = 1.7e-92
Identity = 188/271 (69.37%), Postives = 221/271 (81.55%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFK---VGDGKPLVV 60
           MA+LLSLSS+    TA +  +P++ FKGN+       F+F+PLKL  +     +   LVV
Sbjct: 1   MASLLSLSSTP-PSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVV 60

Query: 61  RSQAAASSLSAS--PVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKS 120
            + A++S++S S       RFRLDNLGPQ GSRKKGKRKGRG +AGQGGSCGFGMRGQKS
Sbjct: 61  VASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKS 120

Query: 121 RSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLE 180
           RSGPG+ +GFEGGQMPLYRRIPKLRGIAGGM AGLPKYVP+NL+DIE AGF+EGEEVSLE
Sbjct: 121 RSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLE 180

Query: 181 SLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRK 240
           SLK KG+INPSGRER+LPLKIL +GELS KL IKARAFS +AKEKLEA GCS+TVLPGRK
Sbjct: 181 SLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRK 240

Query: 241 KWVKPSVAKNLARADEYFAKKRAAAAAAEQA 267
           K++K SV KNLARADEYFAKKRAA+A+  ++
Sbjct: 241 KYIKESVRKNLARADEYFAKKRAASASEAES 270

[Close]
BLAST of Carg01845 vs. Swiss-Prot
Match: sp|P25873|RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL15 PE=1 SV=2)

HSP 1 Score: 335.1 bits (858), Expect = 7.1e-91
Identity = 191/274 (69.71%), Postives = 215/274 (78.47%), Query Frame = 0 

Query: 1   MAALLSLSSSSLT-RTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGD------GK 60
           MA  LS+SS+ LT R    L   +T FKGNV +L +       LKL   +         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  PLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120
           PLVV SQ AA+  S++ V   RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAAT--SSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD 268
           RKKWVKPSVAKN ARADEYFAKKRAAAA A  ++
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSE 272

[Close]
BLAST of Carg01845 vs. Swiss-Prot
Match: sp|P31165|RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 9.6e-88
Identity = 185/263 (70.34%), Postives = 211/263 (80.23%), Query Frame = 0 

Query: 7   LSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKL---KFKVGDGKPLVVRSQAAA 66
           +S++SL   + +LP   +PFKGNVK L +K      LK+   K +V      VV   A+A
Sbjct: 1   MSAASLIPVS-SLPSLASPFKGNVKTLVAKPCLCPCLKIQRTKLRVS-----VVNKAASA 60

Query: 67  SSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRK 126
            ++ +S  E+VRFRLDNLGPQ GSRK+ KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +
Sbjct: 61  YNVKSSG-ENVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMR 120

Query: 127 GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLI 186
           GFEGGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGFQ+GEEVSLE+LK K +I
Sbjct: 121 GFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVI 180

Query: 187 NPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVA 246
           NPSGRERKLPLKILADGELS KL IKA AFS++AKEKLE  GCSL VLPGRKKWVKPSVA
Sbjct: 181 NPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVA 240

Query: 247 KNLARADEYFAKKRAAAAAAEQA 267
           KNLARA+EYFAKKR    A+E A
Sbjct: 241 KNLARAEEYFAKKRGGETASEPA 256

[Close]
BLAST of Carg01845 vs. Swiss-Prot
Match: sp|P31160|RL15_SYNE7 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=rplO PE=3 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 0 

Query: 77  RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EA G S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]
BLAST of Carg01845 vs. Swiss-Prot
Match: sp|Q5N0U8|RL15_SYNP6 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rplO PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 0 

Query: 77  RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EA G S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]
BLAST of Carg01845 vs. TrEMBL
Match: tr|A0A0A0KUI5|A0A0A0KUI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609730 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 3.3e-117
Identity = 229/252 (90.87%), Postives = 235/252 (93.25%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS SLTRTA ALP+PTT FKGNV ILNSK  S S L+LK K  DGK LVVR+Q
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEY 253
           SVAKNLARA+EY
Sbjct: 241 SVAKNLARAEEY 252

[Close]
BLAST of Carg01845 vs. TrEMBL
Match: tr|A0A1S3BFG1|A0A1S3BFG1_CUCME (50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.3e-115
Identity = 225/250 (90.00%), Postives = 233/250 (93.20%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS+SLTRTA ALP+PTT FKGNV ILNSK  S S  KLKFK  DGK LVVR+Q
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASP ++VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAD 251
           SVAKNLARA+
Sbjct: 241 SVAKNLARAE 250

[Close]
BLAST of Carg01845 vs. TrEMBL
Match: tr|A0A2C9UKG6|A0A2C9UKG6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G102900 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 9.2e-104
Identity = 206/265 (77.74%), Postives = 228/265 (86.04%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKV-GDGKPLVVRS 60
           MAA+L LS +   +    L HP++PFKGN+  L  +  +F PLKL FK   +G+P +V +
Sbjct: 1   MAAILPLSLNPSLKPKPYLHHPSSPFKGNLANLKFRACNFIPLKLNFKTNSNGRPSLVVT 60

Query: 61  QAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGP 120
             AAS+  ASP  +VRFRLDNLGPQ GSRK+GKRKGRGISAGQG SCGFGMRGQKSRSGP
Sbjct: 61  NQAASAAVASPASNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGNSCGFGMRGQKSRSGP 120

Query: 121 GVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKE 180
           GVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLE+LKE
Sbjct: 121 GVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLETLKE 180

Query: 181 KGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVK 240
           KGLINPSGRERKLPLKIL DGELSVKL  KARA+S +AKEKLEA GC+LTVLPGRKKWVK
Sbjct: 181 KGLINPSGRERKLPLKILGDGELSVKLKFKARAYSESAKEKLEAAGCALTVLPGRKKWVK 240

Query: 241 PSVAKNLARADEYFAKKRAAAAAAE 265
           PSVAKNLARA+EYFAKK+AAAA +E
Sbjct: 241 PSVAKNLARAEEYFAKKKAAAATSE 265

[Close]
BLAST of Carg01845 vs. TrEMBL
Match: tr|A0A067JZV6|A0A067JZV6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18333 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.5e-101
Identity = 206/262 (78.63%), Postives = 228/262 (87.02%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKV-GDGKP-LVVR 60
           MAA+LSLSSSSL +T  +  H ++ FKGN+  L  K  +F+PLKL       G+P LVV 
Sbjct: 1   MAAILSLSSSSLLKTTPSHHHLSSSFKGNLATLKLKTCNFTPLKLHSNTKPKGRPQLVVV 60

Query: 61  SQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSG 120
           +QA AS   ASP+ + RFRLDNLGPQ GSRK+GKRKGRGISAGQG SCGFGM+GQKSRSG
Sbjct: 61  NQATAS--VASPISNARFRLDNLGPQPGSRKRGKRKGRGISAGQGNSCGFGMKGQKSRSG 120

Query: 121 PGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLK 180
           PGVRKGFEGGQ PLYRR+PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLE+LK
Sbjct: 121 PGVRKGFEGGQTPLYRRVPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLETLK 180

Query: 181 EKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWV 240
           E+GLINPSGRER+LPLKIL DGELSVKLN KARAFS++AKEKLEA GCSLTVLPGRKKWV
Sbjct: 181 ERGLINPSGRERRLPLKILGDGELSVKLNFKARAFSTSAKEKLEAAGCSLTVLPGRKKWV 240

Query: 241 KPSVAKNLARADEYFAKKRAAA 261
           KPSVAKNLARA+EYFAKK+AAA
Sbjct: 241 KPSVAKNLARAEEYFAKKKAAA 260

[Close]
BLAST of Carg01845 vs. TrEMBL
Match: tr|D7T943|D7T943_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03590 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 6.2e-100
Identity = 204/264 (77.27%), Postives = 227/264 (85.98%), Query Frame = 0 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKP-LVVRS 60
           MAALLS+SS+  +RT + L HP++PFKGNV+ L +    F  +KL+ K    K  +VV S
Sbjct: 1   MAALLSVSSAPSSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGVVVAS 60

Query: 61  QAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGP 120
           Q + SS+    V++VRFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQKSRSGP
Sbjct: 61  QGSPSSV----VDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGP 120

Query: 121 GVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKE 180
           GV KGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSL+SLK+
Sbjct: 121 GVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKK 180

Query: 181 KGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVK 240
           KGLINPSGRER+LPLKIL  G+LSVKLNIKARAFSS+AKEKLEA GCS+TVLPGRKKW+K
Sbjct: 181 KGLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLK 240

Query: 241 PSVAKNLARADEYFAKKRAAAAAA 264
           PSV KNLARA+EYFAKKRAAA  A
Sbjct: 241 PSVIKNLARAEEYFAKKRAAAEQA 260

The following BLAST results are available for this feature:
BLAST of Carg01845 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956924.13.0e-138100.0050S ribosomal protein L15, chloroplastic-like [Cucurbita moschata][more]
XP_022984826.12.1e-13699.2550S ribosomal protein L15, chloroplastic-like [Cucurbita maxima][more]
XP_023521047.13.5e-13198.8250S ribosomal protein L15, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_004135093.14.9e-11790.87PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.... [more]
XP_022968128.15.5e-11686.0950S ribosomal protein L15, chloroplastic-like [Cucurbita maxima] >XP_022968129.1... [more]
BLAST of Carg01845 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25920.13.9e-9269.71ribosomal protein L15[more]
AT5G64670.16.6e-0730.81Ribosomal protein L18e/L15 superfamily protein[more]
BLAST of Carg01845 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P22798|RK15_SPIOL1.7e-9269.3750S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 P... [more]
sp|P25873|RK15_ARATH7.1e-9169.7150S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1... [more]
sp|P31165|RK15_PEA9.6e-8870.3450S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=... [more]
sp|P31160|RL15_SYNE71.3e-3152.5350S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) OX=1140 G... [more]
sp|Q5N0U8|RL15_SYNP61.3e-3152.5350S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S... [more]
BLAST of Carg01845 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUI5|A0A0A0KUI5_CUCSA3.3e-11790.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609730 PE=3 SV=1[more]
tr|A0A1S3BFG1|A0A1S3BFG1_CUCME2.3e-11590.0050S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288... [more]
tr|A0A2C9UKG6|A0A2C9UKG6_MANES9.2e-10477.74Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G102900 PE=3 SV=... [more]
tr|A0A067JZV6|A0A067JZV6_JATCU1.5e-10178.63Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18333 PE=3 SV=1[more]
tr|D7T943|D7T943_VITVI6.2e-10077.27Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03590 PE=3 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR036227L18e/L15P_sf
IPR030878Ribosomal_L15
IPR001196Ribosomal_L15_CS
IPR021131Ribosomal_L18e/L15P
IPR005749Ribosomal_L15_bac-type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01845-RACarg01845-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 78..228
e-value: 7.9E-39
score: 130.7
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 64..257
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 102..229
e-value: 1.9E-30
score: 105.9
NoneNo IPR availableGENE3DG3DSA:3.100.10.10coord: 150..232
e-value: 1.6E-18
score: 68.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..126
NoneNo IPR availablePANTHERPTHR12934:SF1150S RIBOSOMAL PROTEIN L15, CHLOROPLASTICcoord: 64..257
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 195..225
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 78..231
score: 18.338
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILYSSF52080Ribosomal proteins L15p and L18ecoord: 79..230

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg01845Cla020402Watermelon (97103) v1carwmB0842
Carg01845Csa5G609730Cucumber (Chinese Long) v2carcuB0857
Carg01845MELO3C012254Melon (DHL92) v3.5.1carmeB0834
Carg01845ClCG05G022660Watermelon (Charleston Gray)carwcgB0816
Carg01845CSPI05G25330Wild cucumber (PI 183967)carcpiB0877
Carg01845Cucsa.283520Cucumber (Gy14) v1carcgyB0968
Carg01845CmaCh04G015020Cucurbita maxima (Rimu)carcmaB1170
Carg01845CmaCh18G010150Cucurbita maxima (Rimu)carcmaB1167
Carg01845CmoCh04G015730Cucurbita moschata (Rifu)carcmoB1138
Carg01845CmoCh18G010250Cucurbita moschata (Rifu)carcmoB1135
Carg01845Lsi04G002470Bottle gourd (USVL1VR-Ls)carlsiB767
Carg01845Cp4.1LG09g03110Cucurbita pepo (Zucchini)carcpeB1169
Carg01845Cp4.1LG01g13690Cucurbita pepo (Zucchini)carcpeB1177
Carg01845CsGy5G024780Cucumber (Gy14) v2carcgybB0831
Carg01845MELO3C012254.2Melon (DHL92) v3.6.1carmedB0846
Carg01845CsaV3_5G034380Cucumber (Chinese Long) v3carcucB0881
Carg01845Cla97C05G104480Watermelon (97103) v2carwmbB0878
Carg01845Bhi07G001098Wax gourdcarwgoB0983
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg01845Carg19064Silver-seed gourdcarcarB629
The following block(s) are covering this gene:
GeneOrganismBlock
Carg01845Silver-seed gourdcarcarB538
Carg01845Cucumber (Gy14) v2carcgybB0830
Carg01845Cucumber (Gy14) v1carcgyB0965
Carg01845Cucurbita maxima (Rimu)carcmaB1160
Carg01845Cucurbita maxima (Rimu)carcmaB1161
Carg01845Cucurbita maxima (Rimu)carcmaB1169
Carg01845Cucurbita moschata (Rifu)carcmoB1130
Carg01845Cucurbita moschata (Rifu)carcmoB1137
Carg01845Cucurbita pepo (Zucchini)carcpeB1175
Carg01845Wild cucumber (PI 183967)carcpiB0876
Carg01845Cucumber (Chinese Long) v2carcuB0856
Carg01845Cucumber (Chinese Long) v2carcuB0863
Carg01845Cucumber (Chinese Long) v3carcucB0887
Carg01845Cucumber (Chinese Long) v3carcucB0880
Carg01845Bottle gourd (USVL1VR-Ls)carlsiB768
Carg01845Melon (DHL92) v3.5.1carmeB0835
Carg01845Melon (DHL92) v3.6.1carmedB0847
Carg01845Watermelon (Charleston Gray)carwcgB0817
Carg01845Watermelon (97103) v1carwmB0846
Carg01845Watermelon (97103) v2carwmbB0880
Carg01845Wax gourdcarwgoB0976