CmaCh04G015020 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G015020
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Description50S ribosomal protein L15, putative
LocationCma_Chr04 : 7635831 .. 7638367 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGACTCCCAGTTTATCCATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCTTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTTCCTTCAAGGTAATTTTAATTCCTGACGTTATCTCATTTCAATTTTCTGGCGCGTTGATTCTTTTATCATTCACGGAACTCTGATTCACATACATTTCCAGGGAAATGTGAAGATTCTGAACTCAAAGCAGTTCAGCTTTTCTTCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCTCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTAATTTCTATCATTCTGCTACTTCCCTTTTGTATTTGAATTATACAACTCTAGAATCTGGCTGGTAGGCGTCCGCAATGGCTAATTGGGCTAGTAGTTGTGGTTGCTTCATTGAGGGAGAGTTCAAATTCTCCTTTCTATCTTATCTTGAATACTTCCATTCATTGGCCACACTCTTTACCCCTTAATTTCTTTTAACCTTCTTAGTACATGGTGGTTGCTGGAGAAATCGCGATTGCTAATAGTTGTTTGTATTTATTGTACTCGTATTTGTGTAGTTCCTTATTCCTTGATCTAGGACATTCGGCCTTGTTAGATTTTAGGAGAATAGGACAACGGAGAAAAGCAGTCACTCTATAATCTGATGTCCTTCTCCTGGTTCCTTTCAAGATGATATAATTCGTATTACATTTGTATGAACTCATGATATTAAGCCGAACAATTTCTTTTCCTTTGCAAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGCTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGGTACTGATGTCACGAGTATCTACATTGTGAAGATTACACAAAGTGTATATCAAAATTGACATGCTGCTCTTTCCGACTCCAAGAAGTGAAACCAAAACTGAATGATTTAAACAGATGTTTCTTAACTCATCAAGATTCTGGTATCTGATTCTTACTGTCTTAACTTCGTCTTTCCTTCAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCTGTTGGCTGTTCCCTTACTGTATTACCTGGGCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGACTCCAAAATTGCGGTTGGTGACAAATTCCAGGTTAAATCTCCTCCTCAGTAATTTTGGGCCTTAGCTAATTTGTGGGCATTAAGTCCAATTTCACATAGTTGTCTGATTGAATTGATGATTGATTTTCAAGTGCAAAATTTTCTCTCTGAAGATGTTGACGCTCTCTTTTACTTATATTAAATTACCATAACCATTAAAAAATAGCGCGTGGAATCCGAGTTGACTAGGGAGAAGAAGAGAACATCAAGAACGGATGATTCAGTTAATTTAGTCGTTGCCATCATTCTCAATCATGTCATCCACTTCGGTAAAAGTCTAGGACCCATTAAATTATTTCTGCTTATCTGAATAAACATCATCCATATCAGTTTGTACATATCCGTTTCACTCAACTGTTGAACTTTTAAGTTGATTTTAAGTCAAGCACGGAATTTCAGTAGAGCGATGGGGATAGCAATAGTCAAATTTGAAATCTTAGGTGAGTTTGATGACTGTTTGCTTCAATAAGTAATGTGCAGTGTTGTTTTGGATGCAAGGCATGTGGTTTATTAATCACATATTGGTTGATGACTCATTTCCTCCCATTCAATAATGCCCATTTGCGTCTAGAAAGTATGAAAGTGACAACTGATCCAAAAGCTGCATAGCTCATGGTGTTGCCCTTTCTAGTTTTCTCCATTATTCTATCAAATTTGGATTTTCTTTCCATGCCTTTTACTCTCTCTCGCTCAAGCTTTGGTTTGAATTTTGATGTCAAAGCCAATACCCAGGAGCCAAAAATGATGATCTTTCCAAACAAGCAGAGTTTATATTAAACGGAAAAGCAAGCTCAAAACTGTCTTTCAAAACCCACAGAAATCCTTAGGCTATCCCTTATATGGTAGTGGGAAAGCCTTTTCTACACGCCTTTATAGGGAAATTGTAGTTTATTAATGTTGAGGATAGTATACTGCTGATATGGAAATATAGATCAAGTTTTACC

mRNA sequence

CCGACTCCCAGTTTATCCATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCTTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTTCCTTCAAGGGAAATGTGAAGATTCTGAACTCAAAGCAGTTCAGCTTTTCTTCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCTCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGCTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCTGTTGGCTGTTCCCTTACTGTATTACCTGGGCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGACTCCAAAATTGCGGTTGGTGACAAATTCCAGGTTAAATCTCCTCCTCAGTAATTTTGGGCCTTAGCTAATTTGTGGGCATTAAGTCCAATTTCACATAGTTGTCTGATTGAATTGATGATTGATTTTCAAGTGCAAAATTTTCTCTCTGAAGATGTTGACGCTCTCTTTTACTTATATTAAATTACCATAACCATTAAAAAATAGCGCGTGGAATCCGAGTTGACTAGGGAGAAGAAGAGAACATCAAGAACGGATGATTCAGTTAATTTAGTCGTTGCCATCATTCTCAATCATGTCATCCACTTCGGTAAAAGTCTAGGACCCATTAAATTATTTCTGCTTATCTGAATAAACATCATCCATATCAGTTTGTACATATCCGTTTCACTCAACTGTTGAACTTTTAAGTTGATTTTAAGTCAAGCACGGAATTTCAGTAGAGCGATGGGGATAGCAATAGTCAAATTTGAAATCTTAGGTGAGTTTGATGACTGTTTGCTTCAATAAGTAATGTGCAGTGTTGTTTTGGATGCAAGGCATGTGGTTTATTAATCACATATTGGTTGATGACTCATTTCCTCCCATTCAATAATGCCCATTTGCGTCTAGAAAGTATGAAAGTGACAACTGATCCAAAAGCTGCATAGCTCATGGTGTTGCCCTTTCTAGTTTTCTCCATTATTCTATCAAATTTGGATTTTCTTTCCATGCCTTTTACTCTCTCTCGCTCAAGCTTTGGTTTGAATTTTGATGTCAAAGCCAATACCCAGGAGCCAAAAATGATGATCTTTCCAAACAAGCAGAGTTTATATTAAACGGAAAAGCAAGCTCAAAACTGTCTTTCAAAACCCACAGAAATCCTTAGGCTATCCCTTATATGGTAGTGGGAAAGCCTTTTCTACACGCCTTTATAGGGAAATTGTAGTTTATTAATGTTGAGGATAGTATACTGCTGATATGGAAATATAGATCAAGTTTTACC

Coding sequence (CDS)

ATGGCTGCTCTTCTTTCCTTATCTTCAAGTTCCTTGACCAGAACAGCCATTGCTCTGCCTCATCCAACCACTTCCTTCAAGGGAAATGTGAAGATTCTGAACTCAAAGCAGTTCAGCTTTTCTTCACTCAAGCTCAAATTCAAGGTGGGAGATGGAAAACCATTGGTTGTTCGCAGCCAGGCCGCTGCGTCTTCCTTGTCTGCCTCTCCCGTCGAGAGTGTGCGGTTCCGTCTGGACAATCTTGGACCACAGCAAGGTTCGAGGAAGAAGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGATTTGGAATGAGAGGACAGAAATCAAGGTCTGGGCCTGGTGTAAGAAAAGGATTCGAAGGTGGACAGATGCCTCTTTATCGGAGAATTCCCAAACTTAGAGGAATTGCAGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCAGTGAATCTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAAGAGGTCTCTTTGGAAAGTTTGAAGGAGAAGGGCTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCTGATGGAGAGCTAAGTGTGAAGCTAAATATCAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAAGCTGTTGGCTGTTCCCTTACTGTATTACCTGGGCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGGGCTGATGAATACTTCGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTGACTGA

Protein sequence

MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD
Homology
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BLAST of CmaCh04G015020 vs. Swiss-Prot
Match: RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2)

HSP 1 Score: 337.4 bits (864), Expect = 1.4e-91
Identity = 193/274 (70.44%), Postives = 217/274 (79.20%), Query Frame = 1 

Query: 1   MAALLSLSSSSLT-RTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGD------GK 60
           MA  LS+SS+ LT R    L   +TSFKGNV +L +      SLKL   +         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  PLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120
           PLVV SQ AA+S  ++ V   RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAATS--SAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD 268
           RKKWVKPSVAKN ARADEYFAKKRAAAA A  ++
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSE 272

[Close]
BLAST of CmaCh04G015020 vs. Swiss-Prot
Match: RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-86
Identity = 184/263 (69.96%), Postives = 210/263 (79.85%), Query Frame = 1 

Query: 7   LSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKL---KFKVGDGKPLVVRSQAAA 66
           +S++SL   + +LP   + FKGNVK L +K      LK+   K +V      VV   A+A
Sbjct: 1   MSAASLIPVS-SLPSLASPFKGNVKTLVAKPCLCPCLKIQRTKLRVS-----VVNKAASA 60

Query: 67  SSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRK 126
            ++ +S  E+VRFRLDNLGPQ GSRK+ KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +
Sbjct: 61  YNVKSSG-ENVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMR 120

Query: 127 GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLI 186
           GFEGGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGFQ+GEEVSLE+LK K +I
Sbjct: 121 GFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVI 180

Query: 187 NPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVA 246
           NPSGRERKLPLKILADGELS KL IKA AFS++AKEKLE  GCSL VLPGRKKWVKPSVA
Sbjct: 181 NPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVA 240

Query: 247 KNLARADEYFAKKRAAAAAAEQA 267
           KNLARA+EYFAKKR    A+E A
Sbjct: 241 KNLARAEEYFAKKRGGETASEPA 256

[Close]
BLAST of CmaCh04G015020 vs. Swiss-Prot
Match: RL15_SYNE7 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) GN=rplO PE=3 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 77  RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EA G S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]
BLAST of CmaCh04G015020 vs. Swiss-Prot
Match: RL15_SYNP6 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplO PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 77  RLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G EV+LESL   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EA G S+ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]
BLAST of CmaCh04G015020 vs. Swiss-Prot
Match: RL15_CYAP7 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 7424) GN=rplO PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.4e-30
Identity = 80/153 (52.29%), Postives = 100/153 (65.36%), Query Frame = 1 

Query: 78  LDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIP 137
           L  L PQ+G+ K+ +R GRGISAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIP
Sbjct: 3   LHELAPQKGATKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKPGFEGGQMPLYRRIP 62

Query: 138 KLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLINPSGRERKLPLKIL 197
           KL+           +Y  +N+  +  A      EV+LE+L + GLI  +      PLKIL
Sbjct: 63  KLKHFP---LVNRRQYTIINVGQL--ASLDPNSEVTLETLMDAGLITTNDG----PLKIL 122

Query: 198 ADGELSVKLNIKARAFSSAAKEKLEAVGCSLTV 231
            +GEL++ L IKA AF+  A+EK+EA G S  V
Sbjct: 123 GNGELTIPLTIKAAAFTKGAQEKIEAAGGSCVV 146

[Close]
BLAST of CmaCh04G015020 vs. TrEMBL
Match: A0A0A0KUI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609730 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 7.4e-124
Identity = 244/266 (91.73%), Postives = 251/266 (94.36%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS SLTRTA ALP+PTTSFKGNV ILNSK  S SSL+LK K  DGK LVVR+Q
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK+AAAAAAEQA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQA 266

[Close]
BLAST of CmaCh04G015020 vs. TrEMBL
Match: A0A067JZV6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18333 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.2e-101
Identity = 206/262 (78.63%), Postives = 228/262 (87.02%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGD-GKP-LVVR 60
           MAA+LSLSSSSL +T  +  H ++SFKGN+  L  K  +F+ LKL       G+P LVV 
Sbjct: 1   MAAILSLSSSSLLKTTPSHHHLSSSFKGNLATLKLKTCNFTPLKLHSNTKPKGRPQLVVV 60

Query: 61  SQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSG 120
           +QA AS   ASP+ + RFRLDNLGPQ GSRK+GKRKGRGISAGQG SCGFGM+GQKSRSG
Sbjct: 61  NQATASV--ASPISNARFRLDNLGPQPGSRKRGKRKGRGISAGQGNSCGFGMKGQKSRSG 120

Query: 121 PGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLK 180
           PGVRKGFEGGQ PLYRR+PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLE+LK
Sbjct: 121 PGVRKGFEGGQTPLYRRVPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLETLK 180

Query: 181 EKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWV 240
           E+GLINPSGRER+LPLKIL DGELSVKLN KARAFS++AKEKLEA GCSLTVLPGRKKWV
Sbjct: 181 ERGLINPSGRERRLPLKILGDGELSVKLNFKARAFSTSAKEKLEAAGCSLTVLPGRKKWV 240

Query: 241 KPSVAKNLARADEYFAKKRAAA 261
           KPSVAKNLARA+EYFAKK+AAA
Sbjct: 241 KPSVAKNLARAEEYFAKKKAAA 260

[Close]
BLAST of CmaCh04G015020 vs. TrEMBL
Match: D7T943_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03590 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.8e-99
Identity = 203/264 (76.89%), Postives = 227/264 (85.98%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKP-LVVRS 60
           MAALLS+SS+  +RT + L HP++ FKGNV+ L +    F ++KL+ K    K  +VV S
Sbjct: 1   MAALLSVSSAPSSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGVVVAS 60

Query: 61  QAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGP 120
           Q + SS+    V++VRFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQKSRSGP
Sbjct: 61  QGSPSSV----VDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGP 120

Query: 121 GVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKE 180
           GV KGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSL+SLK+
Sbjct: 121 GVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKK 180

Query: 181 KGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVK 240
           KGLINPSGRER+LPLKIL  G+LSVKLNIKARAFSS+AKEKLEA GCS+TVLPGRKKW+K
Sbjct: 181 KGLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLK 240

Query: 241 PSVAKNLARADEYFAKKRAAAAAA 264
           PSV KNLARA+EYFAKKRAAA  A
Sbjct: 241 PSVIKNLARAEEYFAKKRAAAEQA 260

[Close]
BLAST of CmaCh04G015020 vs. TrEMBL
Match: M1B5R1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014544 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 7.0e-98
Identity = 206/272 (75.74%), Postives = 226/272 (83.09%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKL---KFKVGDGKPLVV 60
           MA+LLS+SS++  RT   + H ++SFKGNV  L S       +K+   K K     P VV
Sbjct: 1   MASLLSISSAAPARTNSIVTHFSSSFKGNVSNLKSSSKLLPLIKVCNQKSKSITRTPFVV 60

Query: 61  RSQAAASSLSA--SPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKS 120
            +Q A+   ++  S   SVRFRL+NLGPQ G+ K  KRKGRG SAGQGGSCGFGMRGQKS
Sbjct: 61  FNQTASFGAASADSATGSVRFRLNNLGPQPGATKNRKRKGRGHSAGQGGSCGFGMRGQKS 120

Query: 121 RSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLE 180
           RSGPGVRKGFEGGQMPLYRR+PKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE
Sbjct: 121 RSGPGVRKGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE 180

Query: 181 SLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRK 240
           SLK+KGLINPSGRER+LPLKIL DGELSVKLN KARAFSS+AKEKLEAVGCSLTVLPGRK
Sbjct: 181 SLKQKGLINPSGRERRLPLKILGDGELSVKLNFKARAFSSSAKEKLEAVGCSLTVLPGRK 240

Query: 241 KWVKPSVAKNLARADEYFAKKRAAAAAAEQAD 268
           KWVKPSVAKNLARA+EYFAKKRAAAAAAE AD
Sbjct: 241 KWVKPSVAKNLARAEEYFAKKRAAAAAAESAD 272

[Close]
BLAST of CmaCh04G015020 vs. TrEMBL
Match: V4W6I4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016274mg PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.6e-97
Identity = 201/261 (77.01%), Postives = 225/261 (86.21%), Query Frame = 1 

Query: 9   SSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKP-LVVRSQAAASSLS 68
           +S L+ TA +L  P+T FKGNVK L  K  S   + LK +  +  P L V +QAA++S S
Sbjct: 2   ASLLSVTANSLSFPSTPFKGNVKTLMPKPPSSLCVPLKVQQRNKPPQLTVLNQAASASAS 61

Query: 69  AS----PVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRK 128
           A+    PV +VRFRL+NLGPQ GSRK+GKRKGRGI+AGQG SCGFGMRGQKSRSGPGVRK
Sbjct: 62  ATVGSGPVTNVRFRLNNLGPQPGSRKRGKRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRK 121

Query: 129 GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEKGLI 188
           GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGF EG+EVSLE+LK+KGLI
Sbjct: 122 GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLI 181

Query: 189 NPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKPSVA 248
           NPSGRERKLPLKIL DGELS KLN KARAFS++AKEKLEA GC+LTVLPGRKKWVKPSVA
Sbjct: 182 NPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVA 241

Query: 249 KNLARADEYFAKKRAAAAAAE 265
           KNLARA+EYFAKKRAAAAA++
Sbjct: 242 KNLARAEEYFAKKRAAAAASD 262

[Close]
BLAST of CmaCh04G015020 vs. TAIR10
Match: AT3G25920.1 (AT3G25920.1 ribosomal protein L15)

HSP 1 Score: 337.4 bits (864), Expect = 7.9e-93
Identity = 193/274 (70.44%), Postives = 217/274 (79.20%), Query Frame = 1 

Query: 1   MAALLSLSSSSLT-RTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGD------GK 60
           MA  LS+SS+ LT R    L   +TSFKGNV +L +      SLKL   +         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  PLVVRSQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120
           PLVV SQ AA+S  ++ V   RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAATS--SAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVS 180
           KSRSGPG+ +GFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG+EVS
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LESLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPG 240
           LE+LK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA GC+LTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARADEYFAKKRAAAAAAEQAD 268
           RKKWVKPSVAKN ARADEYFAKKRAAAA A  ++
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSE 272

[Close]
BLAST of CmaCh04G015020 vs. TAIR10
Match: AT5G64670.1 (AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 7.1e-09
Identity = 59/185 (31.89%), Postives = 97/185 (52.43%), Query Frame = 1 

Query: 53  KPLVVRSQAAASSLSASPVESVR-FRLDNLGPQQGS--RKKGKRKGRGISAGQGGSCGFG 112
           +P  + +Q   S+  A   + +R + L +L   + +  RK   RKGRGI +G+G + G G
Sbjct: 37  RPSPISTQIPTSTSRALSFQGIRAYSLLSLNDLRDNVPRKLKTRKGRGIGSGKGKTAGRG 96

Query: 113 MRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL----KDIEAAG 172
            +GQK+R    ++ GFEGGQ PL RR+PK RG           + PV L    K I A  
Sbjct: 97  HKGQKARG--TMKFGFEGGQTPLRRRLPK-RGFKNKFKL---HFQPVGLGKIAKLINAGK 156

Query: 173 FQEGEEVSLESLKEKGLINPSGRERKLPLKILADGELSVK--LNIKARAFSSAAKEKLEA 229
               E +++++LK+ G I   G++ +  ++++  G   +K  L+ +    +  AKE +EA
Sbjct: 157 IDSHELITMKTLKDVGAI---GKQIEDGVRLMGRGADDIKWPLHFEVSRVTVRAKEVVEA 212

[Close]
BLAST of CmaCh04G015020 vs. NCBI nr
Match: gi|449434618|ref|XP_004135093.1| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-123
Identity = 244/266 (91.73%), Postives = 251/266 (94.36%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS SLTRTA ALP+PTTSFKGNV ILNSK  S SSL+LK K  DGK LVVR+Q
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLSASP E+VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLESLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK+AAAAAAEQA
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQA 266

[Close]
BLAST of CmaCh04G015020 vs. NCBI nr
Match: gi|659091547|ref|XP_008446604.1| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo])

HSP 1 Score: 448.7 bits (1153), Expect = 6.9e-123
Identity = 241/266 (90.60%), Postives = 251/266 (94.36%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60
           MAAL SLSS+SLTRTA ALP+PTTSFKGNV ILNSK  S SS KLKFK  DGK LVVR+Q
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASP ++VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180
           VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARADEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKK+AAAAAAEQ+
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQS 266

[Close]
BLAST of CmaCh04G015020 vs. NCBI nr
Match: gi|802681312|ref|XP_012082097.1| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Jatropha curcas])

HSP 1 Score: 375.6 bits (963), Expect = 7.4e-101
Identity = 206/262 (78.63%), Postives = 228/262 (87.02%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGD-GKP-LVVR 60
           MAA+LSLSSSSL +T  +  H ++SFKGN+  L  K  +F+ LKL       G+P LVV 
Sbjct: 1   MAAILSLSSSSLLKTTPSHHHLSSSFKGNLATLKLKTCNFTPLKLHSNTKPKGRPQLVVV 60

Query: 61  SQAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSG 120
           +QA AS   ASP+ + RFRLDNLGPQ GSRK+GKRKGRGISAGQG SCGFGM+GQKSRSG
Sbjct: 61  NQATASV--ASPISNARFRLDNLGPQPGSRKRGKRKGRGISAGQGNSCGFGMKGQKSRSG 120

Query: 121 PGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLK 180
           PGVRKGFEGGQ PLYRR+PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLE+LK
Sbjct: 121 PGVRKGFEGGQTPLYRRVPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLETLK 180

Query: 181 EKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWV 240
           E+GLINPSGRER+LPLKIL DGELSVKLN KARAFS++AKEKLEA GCSLTVLPGRKKWV
Sbjct: 181 ERGLINPSGRERRLPLKILGDGELSVKLNFKARAFSTSAKEKLEAAGCSLTVLPGRKKWV 240

Query: 241 KPSVAKNLARADEYFAKKRAAA 261
           KPSVAKNLARA+EYFAKK+AAA
Sbjct: 241 KPSVAKNLARAEEYFAKKKAAA 260

[Close]
BLAST of CmaCh04G015020 vs. NCBI nr
Match: gi|720059771|ref|XP_010274667.1| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 371.7 bits (953), Expect = 1.1e-99
Identity = 206/267 (77.15%), Postives = 228/267 (85.39%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFS---SLKLKFKVGDGKPLVV 60
           MAA LSLSS + +R      +P+TSFKGN   LNS + S +   SLK + K  +G+P+VV
Sbjct: 1   MAAFLSLSSPAPSRV---FHYPSTSFKGNASSLNSLKTSSTPIPSLKFQLKRKEGRPIVV 60

Query: 61  RSQAAASS-LSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSR 120
            S+A++SS  +ASP   VRFRLDNLGPQ GSRK+ KRKGRGISAGQG SCGFGMRGQKSR
Sbjct: 61  LSRASSSSSTAASPSPDVRFRLDNLGPQPGSRKRNKRKGRGISAGQGNSCGFGMRGQKSR 120

Query: 121 SGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLES 180
           SGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL+DI AAGFQEG+EVSLES
Sbjct: 121 SGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLRDIAAAGFQEGDEVSLES 180

Query: 181 LKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKK 240
           LKE+GLINPSGRER LPLKIL DGEL+VKLNIKARAFS +AKEKLEA  CS+TVLPGRKK
Sbjct: 181 LKERGLINPSGRERTLPLKILGDGELNVKLNIKARAFSQSAKEKLEAANCSITVLPGRKK 240

Query: 241 WVKPSVAKNLARADEYFAKKRAAAAAA 264
           WVKPSVAKNLARA+EYFAKKRAA  AA
Sbjct: 241 WVKPSVAKNLARAEEYFAKKRAAETAA 264

[Close]
BLAST of CmaCh04G015020 vs. NCBI nr
Match: gi|359472952|ref|XP_002279311.2| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Vitis vinifera])

HSP 1 Score: 369.0 bits (946), Expect = 7.0e-99
Identity = 203/264 (76.89%), Postives = 227/264 (85.98%), Query Frame = 1 

Query: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKP-LVVRS 60
           MAALLS+SS+  +RT + L HP++ FKGNV+ L +    F ++KL+ K    K  +VV S
Sbjct: 1   MAALLSVSSAPSSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGVVVAS 60

Query: 61  QAAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGP 120
           Q + SS+    V++VRFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQKSRSGP
Sbjct: 61  QGSPSSV----VDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGP 120

Query: 121 GVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKE 180
           GV KGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSL+SLK+
Sbjct: 121 GVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKK 180

Query: 181 KGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVK 240
           KGLINPSGRER+LPLKIL  G+LSVKLNIKARAFSS+AKEKLEA GCS+TVLPGRKKW+K
Sbjct: 181 KGLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLK 240

Query: 241 PSVAKNLARADEYFAKKRAAAAAA 264
           PSV KNLARA+EYFAKKRAAA  A
Sbjct: 241 PSVIKNLARAEEYFAKKRAAAEQA 260

The following BLAST results are available for this feature:
BLAST of CmaCh04G015020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RK15_ARATH1.4e-9170.4450S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 S... [more]
RK15_PEA1.4e-8669.9650S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE... [more]
RL15_SYNE71.3e-3152.5350S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) GN=rplO P... [more]
RL15_SYNP61.3e-3152.5350S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S... [more]
RL15_CYAP72.4e-3052.2950S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 7424) GN=rplO PE=3 SV=1[more]
BLAST of CmaCh04G015020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUI5_CUCSA7.4e-12491.73Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609730 PE=3 SV=1[more]
A0A067JZV6_JATCU5.2e-10178.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18333 PE=3 SV=1[more]
D7T943_VITVI4.8e-9976.89Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03590 PE=3 SV=... [more]
M1B5R1_SOLTU7.0e-9875.74Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014544 PE=3 SV=1[more]
V4W6I4_9ROSI1.6e-9777.01Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016274mg PE=3 SV=1[more]
BLAST of CmaCh04G015020 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25920.17.9e-9370.44 ribosomal protein L15[more]
AT5G64670.17.1e-0931.89 Ribosomal protein L18e/L15 superfamily protein[more]
BLAST of CmaCh04G015020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434618|ref|XP_004135093.1|1.1e-12391.73PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis sativus][more]
gi|659091547|ref|XP_008446604.1|6.9e-12390.60PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo][more]
gi|802681312|ref|XP_012082097.1|7.4e-10178.63PREDICTED: 50S ribosomal protein L15, chloroplastic [Jatropha curcas][more]
gi|720059771|ref|XP_010274667.1|1.1e-9977.15PREDICTED: 50S ribosomal protein L15, chloroplastic [Nelumbo nucifera][more]
gi|359472952|ref|XP_002279311.2|7.0e-9976.89PREDICTED: 50S ribosomal protein L15, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001196Ribosomal_L15_CS
IPR005749Ribosomal_L15_bac-type
IPR021131Ribosomal_L18e/L15P
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005622intracellular
GO:0005840ribosome
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0009735 response to cytokinin
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0000311 plastid large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G015020.1CmaCh04G015020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 195..225
scor
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 1..261
score: 1.6E
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMsTIGR01071TIGR01071coord: 78..228
score: 7.9
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 102..229
score: 1.8
IPR021131Ribosomal protein L18e/L15PunknownSSF52080Ribosomal proteins L15p and L18ecoord: 79..230
score: 3.4
NoneNo IPR availableGENE3DG3DSA:3.100.10.10coord: 107..231
score: 4.9
NoneNo IPR availablePANTHERPTHR12934:SF1150S RIBOSOMAL PROTEIN L15, CHLOROPLASTICcoord: 1..261
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G015020Cucsa.283520Cucumber (Gy14) v1cgycmaB0801
CmaCh04G015020Cla020402Watermelon (97103) v1cmawmB699
CmaCh04G015020Csa5G609730Cucumber (Chinese Long) v2cmacuB748
CmaCh04G015020MELO3C012254Melon (DHL92) v3.5.1cmameB640
CmaCh04G015020ClCG05G022660Watermelon (Charleston Gray)cmawcgB655
CmaCh04G015020CSPI05G25330Wild cucumber (PI 183967)cmacpiB755
CmaCh04G015020CmoCh04G015730Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G015020CmoCh18G010250Cucurbita moschata (Rifu)cmacmoB706
CmaCh04G015020Lsi04G002470Bottle gourd (USVL1VR-Ls)cmalsiB669
CmaCh04G015020Cp4.1LG09g03110Cucurbita pepo (Zucchini)cmacpeB700
CmaCh04G015020Cp4.1LG01g13690Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G015020MELO3C012254.2Melon (DHL92) v3.6.1cmamedB726
CmaCh04G015020CsaV3_5G034380Cucumber (Chinese Long) v3cmacucB0885
CmaCh04G015020Cla97C05G104480Watermelon (97103) v2cmawmbB758
CmaCh04G015020Bhi07G001098Wax gourdcmawgoB0893
CmaCh04G015020CsGy5G024780Cucumber (Gy14) v2cgybcmaB672
CmaCh04G015020Carg19064Silver-seed gourdcarcmaB1457
CmaCh04G015020Carg01845Silver-seed gourdcarcmaB1170
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G015020CmaCh18G010150Cucurbita maxima (Rimu)cmacmaB402
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G015020Silver-seed gourdcarcmaB0836
CmaCh04G015020Cucumber (Chinese Long) v3cmacucB0817
CmaCh04G015020Watermelon (97103) v2cmawmbB771
CmaCh04G015020Wax gourdcmawgoB0850
CmaCh04G015020Cucurbita maxima (Rimu)cmacmaB165
CmaCh04G015020Cucurbita maxima (Rimu)cmacmaB329
CmaCh04G015020Cucumber (Gy14) v1cgycmaB0781
CmaCh04G015020Cucurbita moschata (Rifu)cmacmoB696
CmaCh04G015020Wild cucumber (PI 183967)cmacpiB695
CmaCh04G015020Cucumber (Chinese Long) v2cmacuB737
CmaCh04G015020Cucumber (Chinese Long) v2cmacuB686
CmaCh04G015020Melon (DHL92) v3.5.1cmameB673
CmaCh04G015020Watermelon (Charleston Gray)cmawcgB666
CmaCh04G015020Watermelon (97103) v1cmawmB746
CmaCh04G015020Cucurbita pepo (Zucchini)cmacpeB707
CmaCh04G015020Cucurbita pepo (Zucchini)cmacpeB748
CmaCh04G015020Bottle gourd (USVL1VR-Ls)cmalsiB693
CmaCh04G015020Cucumber (Gy14) v2cgybcmaB131
CmaCh04G015020Melon (DHL92) v3.6.1cmamedB755