Carg01192 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01192
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein IQ-DOMAIN 1-like
Location	Cucurbita_argyrosperma_scaffold_002 : 1412896 .. 1413393 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTACAAGAAACTGGTTTAGAAGAGTCAGAAGGAGGTTGAGTAGAAAAGGCAACAGAGACATTGTTTTTCTGCAGACAAATGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGCTTATGATTCAATTGTTCCAAGTTTCCAAAAGAAAGCTGTGTGTTTAGAGGAAGTGGCAGCCATCAAAATCCAAACTTGTTTCAGAGGCCATCTTGTATTATATCTTTTCATCACACTTTACTTCCCTTTTACCTGTTTTGCATCCCAAAATATCTCATACATTTAATCATTTATTGTTCTTCAGGCAAGACGAGCATTTCGAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGACAGGCACGCATAGCTCTTCAGTTCATGTATACATTGGCTCGATTGCAAGTTCGGGTTCGGACTCGCCAGCTTGTGAGCAGATACAGTGAGGAGTCTGATTGTTGA

mRNA sequence

ATGGGGATTACAAGAAACTGGTTTAGAAGAGTCAGAAGGAGGTTGAGTAGAAAAGGCAACAGAGACATTGTTTTTCTGCAGACAAATGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGCTTATGATTCAATTGTTCCAAGTTTCCAAAAGAAAGCTGTGTGTTTAGAGGAAGTGGCAGCCATCAAAATCCAAACTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCGAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGACAGGCACGCATAGCTCTTCAGTTCATGTATACATTGGCTCGATTGCAAGTTCGGGTTCGGACTCGCCAGCTTGTGAGCAGATACAGTGAGGAGTCTGATTGTTGA

Coding sequence (CDS)

ATGGGGATTACAAGAAACTGGTTTAGAAGAGTCAGAAGGAGGTTGAGTAGAAAAGGCAACAGAGACATTGTTTTTCTGCAGACAAATGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGCTTATGATTCAATTGTTCCAAGTTTCCAAAAGAAAGCTGTGTGTTTAGAGGAAGTGGCAGCCATCAAAATCCAAACTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCGAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGACAGGCACGCATAGCTCTTCAGTTCATGTATACATTGGCTCGATTGCAAGTTCGGGTTCGGACTCGCCAGCTTGTGAGCAGATACAGTGAGGAGTCTGATTGTTGA

Protein sequence

MGITRNWFRRVRRRLSRKGNRDIVFLQTNAEEEEEEEEEEEEEIAYDSIVPSFQKKAVCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRVRTRQLVSRYSEESDC

Homology

[Close]

BLAST of Carg01192 vs. NCBI nr
Match: XP_022959434.1 (protein IQ-DOMAIN 1 [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 9.7e-53
Identity = 124/135 (91.85%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTNXXXXXXXXXXXXXXXAYDSIVPSFQKKAVCL 60
           MGITRNWFRRVRRRLSRKGNRDIVFLQTN       XXXXXX  AYDSIVPSFQKKAVCL
Sbjct: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTN----AEEXXXXXXEIAYDSIVPSFQKKAVCL 60

Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFM+TLARLQV+V
Sbjct: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMHTLARLQVQV 120

Query: 121 RTRQLVSRYSEESDC 136
           RTRQLVSRYSEESDC
Sbjct: 121 RTRQLVSRYSEESDC 131

[Close]

BLAST of Carg01192 vs. NCBI nr
Match: XP_023540081.1 (protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.5 bits (545), Expect = 2.2e-52
Identity = 117/135 (86.67%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTNXXXXXXXXXXXXXXXAYDSIVPSFQKKAVCL 60
           MGITRNWFRRVRRRLSRKGNRDIVFLQTN                YDSIVPSFQKKA+CL
Sbjct: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTN-----AEEEQQQDEIVYDSIVPSFQKKALCL 60

Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFM+TLARLQVRV
Sbjct: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMHTLARLQVRV 120

Query: 121 RTRQLVSRYSEESDC 136
           RTRQLVSRYSEESDC
Sbjct: 121 RTRQLVSRYSEESDC 130

[Close]

BLAST of Carg01192 vs. NCBI nr
Match: XP_022971319.1 (protein IQ-DOMAIN 1 [Cucurbita maxima])

HSP 1 Score: 207.2 bits (526), Expect = 3.4e-50
Identity = 115/136 (84.56%), Postives = 118/136 (86.76%), Query Frame = 0


Query: 1   MGITRN-WFRRVRRRLSRKGNRDIVFLQTNXXXXXXXXXXXXXXXAYDSIVPSFQKKAVC 60
           MGITRN WFRRVRR LSRKGNRDIVFLQTN               AYDSI+PSFQKKA+C
Sbjct: 1   MGITRNWWFRRVRRTLSRKGNRDIVFLQTN------AEEEQQQEIAYDSIIPSFQKKALC 60

Query: 61  LEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVR 120
           LEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVC RRQARIALQFM+TLARLQVR
Sbjct: 61  LEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCVRRQARIALQFMHTLARLQVR 120

Query: 121 VRTRQLVSRYSEESDC 136
           VRTRQLVSRYSEESDC
Sbjct: 121 VRTRQLVSRYSEESDC 130

[Close]

BLAST of Carg01192 vs. NCBI nr
Match: XP_022923472.1 (protein IQ-DOMAIN 31-like [Cucurbita moschata])

HSP 1 Score: 173.3 bits (438), Expect = 5.5e-40
Identity = 113/158 (71.52%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTN------------------------XXXXXXX 60
           MGITRNWFRR RR+LSRK NRDIVFLQTN                        XXXXXXX
Sbjct: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXAYDSIVPSFQKKAVCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARG 120
           XXXXXXX  YDS +PSFQ K + +EEVAAIKIQ CFRGHLARRAF+ALRSLVKLQALARG
Sbjct: 61  XXXXXXXFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120

Query: 121 VCARRQARIALQFMYTLARLQVRVRTRQLVSRYSEESD 135
           VCARRQAR+ALQFM+ L RLQVRVR RQL++RYSEESD
Sbjct: 121 VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESD 158

[Close]

BLAST of Carg01192 vs. NCBI nr
Match: XP_004146164.2 (PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus] >KGN55627.1 hypothetical protein Csa_3G002470 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-34
Identity = 99/158 (62.66%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRL-SRKGNRDIVFLQTNXXXXXXXXXXXXXXXA-------------- 60
           MGITRNWFRR RR+L SR GN   VFLQTN          XXXXX               
Sbjct: 1   MGITRNWFRRARRKLISRNGNSRDVFLQTNASPIHDEEQTXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ---------YDSIVPSFQKKAVCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARG 120
                    Y+S+ P FQ K +  EE AAIKIQ CFRGHLARRAF+ALRSLVKLQALARG
Sbjct: 61  XXXXXXXXDYESMTPRFQNKVLSKEEEAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120

Query: 121 VCARRQARIALQFMYTLARLQVRVRTRQLVSRYSEESD 135
           VCARRQARIALQFM+ L RLQVRVR RQL++RYSEESD
Sbjct: 121 VCARRQARIALQFMHALVRLQVRVRARQLLNRYSEESD 158

[Close]

BLAST of Carg01192 vs. TAIR10
Match: AT3G51380.1 (IQ-domain 20)

HSP 1 Score: 73.9 bits (180), Expect = 8.3e-14
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           EE+AA+KIQ  FRGHLARRAF+AL+SLV            RQARIAL  M+ LARLQVRV
Sbjct: 36  EEIAAVKIQAFFRGHLARRAFKALKSLVXXXXXXXXXXXXRQARIALHCMHALARLQVRV 95

Query: 121 RTRQLVS 128
           R RQL+S
Sbjct: 96  RARQLLS 102

[Close]

BLAST of Carg01192 vs. TAIR10
Match: AT5G03040.1 (IQ-domain 2)

HSP 1 Score: 64.3 bits (155), Expect = 6.5e-11
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 0


Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           EE AAI IQT FRG+LARRA RA+R LV+L+ L  G   +RQA   L+ M TL+R+Q ++
Sbjct: 114 EEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTLKCMQTLSRVQSQI 173

Query: 121 RTRQLVSRYSEES 134
           R R++  R SEE+
Sbjct: 174 RARRI--RMSEEN 184

[Close]

BLAST of Carg01192 vs. TAIR10
Match: AT1G01110.2 (IQ-domain 18)

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           E  AA+ IQT FRG+LARRA RAL+ LVKLQAL RG   R+QA++ L+ M  L R+Q RV
Sbjct: 120 ENYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRV 179

[Close]

BLAST of Carg01192 vs. TAIR10
Match: AT4G00820.1 (IQ-domain 17)

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           E+ AA+ IQT FRG+LARRA RAL+ LVKLQAL RG   R+QA++ L+ M  L R+Q RV
Sbjct: 131 EDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRV 190

[Close]

BLAST of Carg01192 vs. TAIR10
Match: AT4G23060.1 (IQ-domain 22)

HSP 1 Score: 60.5 bits (145), Expect = 9.4e-10
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 62  EVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRVR 121
           E+A IKIQ+ FRG+LA+RA RAL+ LV+LQA+ RG   R++  + L+ M+ L R Q RVR
Sbjct: 167 ELAVIKIQSIFRGYLAKRALRALKGLVRLQAIVRGHIERKRMSVHLRRMHALVRAQARVR 226

Query: 122 -TRQLVSRYSEES 134
            TR +V+  S  S
Sbjct: 227 ATRVIVTPESSSS 239

[Close]

BLAST of Carg01192 vs. Swiss-Prot
Match: sp|Q9SF32|IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana OX=3702 GN=IQD1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           EE AAI IQ+ FRGHLARR  + +R   +L+ L  G   +RQA I L+ M TL+R+Q ++
Sbjct: 107 EEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQI 166

Query: 121 RTRQLVSRYSEES 134
           R+R++  R SEE+
Sbjct: 167 RSRRI--RMSEEN 177

[Close]

BLAST of Carg01192 vs. Swiss-Prot
Match: sp|Q8L4D8|IQD31_ARATH (Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana OX=3702 GN=IQD31 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-05
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 62  EVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQA 104
           E+AA  +Q  FRG+LARRAF AL+ +++LQAL RG   RRQA
Sbjct: 113 EIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQA 154

[Close]

BLAST of Carg01192 vs. Swiss-Prot
Match: sp|Q8LPG9|IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.3e-04
Identity = 23/66 (34.85%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 60  LEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVR 119
           ++  +A KIQ  FRG++AR++FRAL+ LV+      G   +RQ   A+++M  + R+Q +
Sbjct: 320 VQHASATKIQGAFRGYMARKSFRALKGLVRXXXXXXGYSVKRQTINAMKYMQQVVRVQSQ 379

Query: 120 VRTRQL 126
           +++R++
Sbjct: 380 IQSRRI 385

[Close]

BLAST of Carg01192 vs. TrEMBL
Match: tr|A0A0A0L4V7|A0A0A0L4V7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002470 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34
Identity = 99/158 (62.66%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRL-SRKGNRDIVFLQTNXXXXXXXXXXXXXXXA-------------- 60
           MGITRNWFRR RR+L SR GN   VFLQTN          XXXXX               
Sbjct: 1   MGITRNWFRRARRKLISRNGNSRDVFLQTNASPIHDEEQTXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ---------YDSIVPSFQKKAVCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARG 120
                    Y+S+ P FQ K +  EE AAIKIQ CFRGHLARRAF+ALRSLVKLQALARG
Sbjct: 61  XXXXXXXXDYESMTPRFQNKVLSKEEEAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120

Query: 121 VCARRQARIALQFMYTLARLQVRVRTRQLVSRYSEESD 135
           VCARRQARIALQFM+ L RLQVRVR RQL++RYSEESD
Sbjct: 121 VCARRQARIALQFMHALVRLQVRVRARQLLNRYSEESD 158

[Close]

BLAST of Carg01192 vs. TrEMBL
Match: tr|A0A1R3GCE4|A0A1R3GCE4_COCAP (IQ motif, EF-hand binding site OS=Corchorus capsularis OX=210143 GN=CCACVL1_27041 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-24
Identity = 70/131 (53.44%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTNXXXXXXXXXXXXXXXAYDSIVPSFQKKAVCL 60
           MG  RNWF  VR++L  K  RDI  L +                A  S   SFQ + +  
Sbjct: 1   MGTARNWFNTVRKKLINKSQRDITILHSPSHNSDISFIRDFDSAATSSRSVSFQTRHLTR 60

Query: 61  EEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVRV 120
           +++AAIKIQ  FRGHLARRA+RALRSLVKLQA+ARGV  R+QA+IALQ M+ L RLQVRV
Sbjct: 61  QDIAAIKIQAVFRGHLARRAYRALRSLVKLQAVARGVYIRKQAQIALQCMHALVRLQVRV 120

Query: 121 RTRQLVSRYSE 132
           R RQL++ YS+
Sbjct: 121 RARQLLTTYSQ 131

[Close]

BLAST of Carg01192 vs. TrEMBL
Match: tr|A0A2I4GPL3|A0A2I4GPL3_9ROSI (protein IQ-DOMAIN 32 OS=Juglans regia OX=51240 GN=LOC109009698 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-21
Identity = 71/143 (49.65%), Postives = 89/143 (62.24%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTN---------XXXXXXXXXXXXXXXAYDSIVP 60
           M +++N F RVRR+  R  +RDI+  QTN                           S +P
Sbjct: 1   MRMSQNLFNRVRRKFRRTSHRDIILSQTNTCARSSTDEAITTDQETAIFKNAIGVASSIP 60

Query: 61  SF-QKKAVCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFM 120
           S  +KK +  +++AAIKIQ  FRGHLARRAF ALRSLVKLQA+ RGVC RRQAR+AL  M
Sbjct: 61  SISRKKDLTKDDIAAIKIQAFFRGHLARRAFLALRSLVKLQAVVRGVCVRRQARVALHCM 120

Query: 121 YTLARLQVRVRTRQLVSRYSEES 134
           + LARLQVRVR RQL++   E+S
Sbjct: 121 HALARLQVRVRARQLLNGDQEQS 143

[Close]

BLAST of Carg01192 vs. TrEMBL
Match: tr|M5W9S8|M5W9S8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024407mg PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTN-XXXXXXXXXXXXXXXAYDSIVPSFQKKAVC 60
           MG  R WF+ +RR+L R  NRDI+ + TN                   S      KK + 
Sbjct: 1   MGSYRKWFKTIRRKLGRSSNRDIIVVYTNTSPSTHEESARYQDLNGSASXXXXXTKKFLS 60

Query: 61  LEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVR 120
            E++AAIK+Q  FRGHLAR+AFRALRSLVKLQAL RG C R+QA +AL  M+ L RLQV+
Sbjct: 61  HEDIAAIKLQAFFRGHLARQAFRALRSLVKLQALVRGACVRKQAXMALHCMHALVRLQVK 120

Query: 121 VRTRQLVS 128
           VR RQL+S
Sbjct: 121 VRARQLLS 128

[Close]

BLAST of Carg01192 vs. TrEMBL
Match: tr|A0A251NCZ5|A0A251NCZ5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G176100 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTN-XXXXXXXXXXXXXXXAYDSIVPSFQKKAVC 60
           MG  R WF+ +RR+L R  NRDI+ + TN                   S      KK + 
Sbjct: 10  MGSYRKWFKTIRRKLGRSSNRDIIVVYTNTSPSTHEESARYQDLNGSASXXXXXTKKFLS 69

Query: 61  LEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMYTLARLQVR 120
            E++AAIK+Q  FRGHLAR+AFRALRSLVKLQAL RG C R+QA +AL  M+ L RLQV+
Sbjct: 70  HEDIAAIKLQAFFRGHLARQAFRALRSLVKLQALVRGACVRKQAXMALHCMHALVRLQVK 129

Query: 121 VRTRQLVS 128
           VR RQL+S
Sbjct: 130 VRARQLLS 137

The following BLAST results are available for this feature:

BLAST of Carg01192 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959434.1	9.7e-53	91.85	protein IQ-DOMAIN 1 [Cucurbita moschata]	[more]
XP_023540081.1	2.2e-52	86.67	protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022971319.1	3.4e-50	84.56	protein IQ-DOMAIN 1 [Cucurbita maxima]	[more]
XP_022923472.1	5.5e-40	71.52	protein IQ-DOMAIN 31-like [Cucurbita moschata]	[more]
XP_004146164.2	1.6e-34	62.66	PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus] >KGN55627.1 hypothetical protei...	[more]

BLAST of Carg01192 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51380.1	8.3e-14	64.18	IQ-domain 20	[more]
AT5G03040.1	6.5e-11	53.42	IQ-domain 2	[more]
AT1G01110.2	1.9e-10	60.00	IQ-domain 18	[more]
AT4G00820.1	1.9e-10	60.00	IQ-domain 17	[more]
AT4G23060.1	9.4e-10	50.68	IQ-domain 22	[more]

BLAST of Carg01192 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SF32\|IQD1_ARATH	1.4e-07	47.95	Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana OX=3702 GN=IQD1 PE=1 SV=1	[more]
sp\|Q8L4D8\|IQD31_ARATH	3.0e-05	59.52	Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana OX=3702 GN=IQD31 PE=1 SV=1	[more]
sp\|Q8LPG9\|IQD14_ARATH	3.3e-04	34.85	Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1	[more]

BLAST of Carg01192 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4V7\|A0A0A0L4V7_CUCSA	1.0e-34	62.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002470 PE=4 SV=1	[more]
tr\|A0A1R3GCE4\|A0A1R3GCE4_COCAP	2.1e-24	53.44	IQ motif, EF-hand binding site OS=Corchorus capsularis OX=210143 GN=CCACVL1_2704...	[more]
tr\|A0A2I4GPL3\|A0A2I4GPL3_9ROSI	1.0e-21	49.65	protein IQ-DOMAIN 32 OS=Juglans regia OX=51240 GN=LOC109009698 PE=4 SV=1	[more]
tr\|M5W9S8\|M5W9S8_PRUPE	2.2e-21	50.78	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024407mg PE=4 SV=1	[more]
tr\|A0A251NCZ5\|A0A251NCZ5_PRUPE	2.2e-21	50.78	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G176100 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR000048	IQ_motif_EF-hand-BS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01192-RA	Carg01192-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..43
None	No IPR available	GENE3D	G3DSA:1.20.5.190		coord: 61..108 e-value: 1.1E-8 score: 36.6
None	No IPR available	PANTHER	PTHR32295:SF86	SUBFAMILY NOT NAMED	coord: 5..126
None	No IPR available	PANTHER	PTHR32295	FAMILY NOT NAMED	coord: 5..126
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 83..104 e-value: 50.0 score: 7.9 coord: 60..82 e-value: 7.4E-6 score: 35.5
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 64..82 e-value: 3.9E-7 score: 29.2
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 85..112 score: 7.382
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 61..89 score: 11.262
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 59..107

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01192	Cla008929	Watermelon (97103) v1	carwmB0149
Carg01192	Csa3G002470	Cucumber (Chinese Long) v2	carcuB0173
Carg01192	ClCG10G000420	Watermelon (Charleston Gray)	carwcgB0148
Carg01192	CSPI03G00430	Wild cucumber (PI 183967)	carcpiB0179
Carg01192	Cucsa.322930	Cucumber (Gy14) v1	carcgyB0197
Carg01192	CmaCh06G001400	Cucurbita maxima (Rimu)	carcmaB0216
Carg01192	CmaCh16G012600	Cucurbita maxima (Rimu)	carcmaB0205
Carg01192	CmoCh06G001340	Cucurbita moschata (Rifu)	carcmoB0227
Carg01192	CmoCh16G013090	Cucurbita moschata (Rifu)	carcmoB0216
Carg01192	Lsi07G010740	Bottle gourd (USVL1VR-Ls)	carlsiB146
Carg01192	Cp4.1LG14g10730	Cucurbita pepo (Zucchini)	carcpeB0223
Carg01192	CsGy3G000400	Cucumber (Gy14) v2	carcgybB0168
Carg01192	MELO3C032249.2	Melon (DHL92) v3.6.1	carmedB0166
Carg01192	CsaV3_3G000450	Cucumber (Chinese Long) v3	carcucB0179
Carg01192	Cla97C10G184950	Watermelon (97103) v2	carwmbB0160
Carg01192	Bhi11G000239	Wax gourd	carwgoB0198

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01192	Carg19450	Silver-seed gourd	carcarB191

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01192	Silver-seed gourd	carcarB189
Carg01192	Cucurbita pepo (Zucchini)	carcpeB0233
Carg01192	Melon (DHL92) v3.5.1	carmeB0165