CSPI03G00430 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTACAAGGAACTGGTTTAGAAGAGCAAGAAGGAAGCTGATCAGTAGAAATGGCAACAGCAGAGACGTTTTTCTGCAAACAAATGCAAGTCCAATTCATGATGAAGAACAAACCAATCTTACATTAACCCAACAACAAGATGGAGAAGAAGAAGAAGATGAAGAGGAAGATGAAGAGGAAGAAGAAGAAGAGGAAATTGATTATGAATCAATGACACCCAGATTTCAAAACAAAGTGTTGTCTAAAGAGGAAGAGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGTAATTATATCTCACCATGTTTTCTTTCTTTTCACTATCTAAATCTATATACATTTTACCTTTCAAGGATGGTTTTTTTTAGTTATAGAATACTATTTCTTAATCAACGATAATTTTGAAAAATATAGTTTTTAAAATTTACTCAACGTCTTAAAATTTTATAAATACCTTTTACATTTAGTTAGATATTGAAAATATGTAAAAAAAAAACAATACAGTGAATAATGAATGAATTCATGTCTTTTACACGATAACTAGAAGACTCAAAAGTATCCATTAACAAATAGAGGGAAAATTTTATTTTTTGAATTTTTGATTGGTACAATTAATCATTTGATATATCACCTAACAGTCACGCTTATTGTTCAGGCAAGACGAGCATTTCAAGCCCTAAGAAGTTTGGTGAAGCTACAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGGCAGGCACGAATAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGTGTTCGTGCTCGTCAGCTTTTAAACAGATACAGTGAAGAGTCTGATAGTTGA ATGGGGATTACAAGGAACTGGTTTAGAAGAGCAAGAAGGAAGCTGATCAGTAGAAATGGCAACAGCAGAGACGTTTTTCTGCAAACAAATGCAAGTCCAATTCATGATGAAGAACAAACCAATCTTACATTAACCCAACAACAAGATGGAGAAGAAGAAGAAGATGAAGAGGAAGATGAAGAGGAAGAAGAAGAAGAGGAAATTGATTATGAATCAATGACACCCAGATTTCAAAACAAAGTGTTGTCTAAAGAGGAAGAGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCCCTAAGAAGTTTGGTGAAGCTACAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGGCAGGCACGAATAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGTGTTCGTGCTCGTCAGCTTTTAAACAGATACAGTGAAGAGTCTGATAGTTGA ATGGGGATTACAAGGAACTGGTTTAGAAGAGCAAGAAGGAAGCTGATCAGTAGAAATGGCAACAGCAGAGACGTTTTTCTGCAAACAAATGCAAGTCCAATTCATGATGAAGAACAAACCAATCTTACATTAACCCAACAACAAGATGGAGAAGAAGAAGAAGATGAAGAGGAAGATGAAGAGGAAGAAGAAGAAGAGGAAATTGATTATGAATCAATGACACCCAGATTTCAAAACAAAGTGTTGTCTAAAGAGGAAGAGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCCCTAAGAAGTTTGGTGAAGCTACAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGGCAGGCACGAATAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGTGTTCGTGCTCGTCAGCTTTTAAACAGATACAGTGAAGAGTCTGATAGTTGA
BLAST of CSPI03G00430 vs. Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06 Identity = 27/68 (39.71%), Postives = 49/68 (72.06%), Query Frame = 1
BLAST of CSPI03G00430 vs. Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.1e-06 Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 1
BLAST of CSPI03G00430 vs. TrEMBL
Match: A0A0A0L4V7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002470 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 2.1e-73 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of CSPI03G00430 vs. TrEMBL
Match: A0A068U0J4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037003001 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-19 Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of CSPI03G00430 vs. TrEMBL
Match: A0A087GWY0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G138100 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18 Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 1
BLAST of CSPI03G00430 vs. TrEMBL
Match: B9SXK9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017280 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.9e-18 Identity = 77/156 (49.36%), Postives = 94/156 (60.26%), Query Frame = 1
BLAST of CSPI03G00430 vs. TrEMBL
Match: U5GH94_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10840g PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.3e-18 Identity = 71/153 (46.41%), Postives = 95/153 (62.09%), Query Frame = 1
BLAST of CSPI03G00430 vs. TAIR10
Match: AT3G51380.1 (AT3G51380.1 IQ-domain 20) HSP 1 Score: 98.2 bits (243), Expect = 4.8e-21 Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = 1
BLAST of CSPI03G00430 vs. TAIR10
Match: AT3G22190.1 (AT3G22190.1 IQ-domain 5) HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 1
BLAST of CSPI03G00430 vs. TAIR10
Match: AT2G26180.1 (AT2G26180.1 IQ-domain 6) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 1
BLAST of CSPI03G00430 vs. TAIR10
Match: AT5G07240.1 (AT5G07240.1 IQ-domain 24) HSP 1 Score: 67.4 bits (163), Expect = 9.2e-12 Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 1
BLAST of CSPI03G00430 vs. TAIR10
Match: AT3G49260.3 (AT3G49260.3 IQ-domain 21) HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11 Identity = 37/67 (55.22%), Postives = 54/67 (80.60%), Query Frame = 1
BLAST of CSPI03G00430 vs. NCBI nr
Match: gi|778688269|ref|XP_004146164.2| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 3.0e-73 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of CSPI03G00430 vs. NCBI nr
Match: gi|657948163|ref|XP_008393613.1| (PREDICTED: protein IQ-DOMAIN 31-like isoform X1 [Malus domestica]) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22 Identity = 76/156 (48.72%), Postives = 97/156 (62.18%), Query Frame = 1
BLAST of CSPI03G00430 vs. NCBI nr
Match: gi|657978002|ref|XP_008380924.1| (PREDICTED: uncharacterized protein LOC103443805 isoform X2 [Malus domestica]) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22 Identity = 76/155 (49.03%), Postives = 97/155 (62.58%), Query Frame = 1
BLAST of CSPI03G00430 vs. NCBI nr
Match: gi|694435284|ref|XP_009344813.1| (PREDICTED: protein IQ-DOMAIN 31-like [Pyrus x bretschneideri]) HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21 Identity = 75/155 (48.39%), Postives = 98/155 (63.23%), Query Frame = 1
BLAST of CSPI03G00430 vs. NCBI nr
Match: gi|659095299|ref|XP_008448508.1| (PREDICTED: protein IQ-DOMAIN 31 [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |