Carg00512 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00512
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	SNF1-related protein kinase regulatory subunit beta-2-like
Location	Cucurbita_argyrosperma_scaffold_014 : 98465 .. 99805 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTGAGTTAGTTCCCTGAATTTTGCCTTTCATTCCTGGTCGTGAATTCCTCCAGTTCATTGAAAATTGATATACGGTGGGGATGTTTGGTGTTGTATGTAATTGGAAATTCCTTTCGTTTCCTTTTTCGATAAGTTTCTTGCGAGGAATCTTGGCCTTTTCGTGTCGCTACTTTACCTGCACGGTATGTGTTTGATGTAAGTCCTACATGAATAGATGGACGATTTGGTGAATCTACAGGGCTATTGTTACACTATAATTCTCTGTGCAAATTCGATCGACTGCCTCTTATCTTTTATCTTCCCATTTCAGTGTTGTGCTGTATAAGCTTTCTTGAATCTTTGTCCAGAATGCATCTTGATTTTAGGGTTCAAAATACGCTTGAACTTTGGTGTAGATTTCAATCATGAAAAAGCACCTTGGATAGTTTTCTGTAATAATAAAAACTGGAAAGTGTTCATAGCATCATTTACAATTCAAGCTCAACTATATAGAGATTAAGATCATTGTTAGTTTCAAGTTAAAAGATGTTCATATCGTTAACTCAACCAACATGAACGATATTATAAACGATGGCGTACAAATTTTCATTCACCATTTTAATGAAAAAGTCTCTATAGGTATTTTTTGGAACAGTTTCAATATTATAACTCATCTAACTTGCAAATTCACTTTGAATGCCTAGAAAGTTACCCATTTTGGATTCTGGAAAACAGTCAAAGATGCTGTTGAGCTATAACCATAATGTTCCTCTTCAGTTTTGATCAATAATGTTACTATAGATTGAGCTGTGAATCATTCTGTGATCTCTGCACTGGTTTCTTTTCTTCAGTGTCTGACCTTCTGTCCTTGCGAGCCATGATTTTGAGTACTTCTATCTGTCTTAACAGGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAGTTTGTTGCTCTATTCTCTCAATTTGTAGTTCGTTTCTTACTCGATTGA

mRNA sequence

ATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAGTTTGTTGCTCTATTCTCTCAATTTGTAGTTCGTTTCTTACTCGATTGA

Coding sequence (CDS)

ATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAGTTTGTTGCTCTATTCTCTCAATTTGTAGTTCGTTTCTTACTCGATTGA

Protein sequence

MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGGKEVAVEGSWDNWKSKFVALFSQFVVRFLLD

Homology

[Close]

BLAST of Carg00512 vs. NCBI nr
Match: XP_022949884.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata])

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-71
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWKSK
Sbjct: 121 KEVAVEGSWDNWKSK 135

[Close]

BLAST of Carg00512 vs. NCBI nr
Match: XP_023543083.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-71
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWKSK
Sbjct: 121 KEVAVEGSWDNWKSK 135

[Close]

BLAST of Carg00512 vs. NCBI nr
Match: XP_022977712.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 9.7e-70
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYL GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLIGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDE+PNSSESWMNNSSLFDDV+SEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDEVPNSSESWMNNSSLFDDVNSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWKSK
Sbjct: 121 KEVAVEGSWDNWKSK 135

[Close]

BLAST of Carg00512 vs. NCBI nr
Match: XP_004134805.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >KGN49035.1 hypothetical protein Csa_6G511020 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPS        VG RR SLPDGL+ PPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSXXXXXXXXVGGRRSSLPDGLSVPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPVVPLPRPDE+ +SS+SWM+NSS FD+V SEQGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVVPLPRPDEVHSSSQSWMHNSSWFDEVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWK K
Sbjct: 121 KEVAVEGSWDNWKMK 135

[Close]

BLAST of Carg00512 vs. NCBI nr
Match: XP_008440979.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55
Identity = 107/135 (79.26%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPS         G RR SLPDGLAAPPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSXXXXXXXXXGGRRSSLPDGLAAPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPV+PLPRPDE+ +SS+SWM+NSS FD+V S+QGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVIPLPRPDEVHSSSQSWMHNSSWFDEVGSDQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWK K
Sbjct: 121 KEVAVEGSWDNWKMK 135

[Close]

BLAST of Carg00512 vs. TAIR10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-30
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 51  PTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQG 110
           P ELMG SPP SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQG
Sbjct: 14  PPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQG 73

Query: 111 IPTMITWSHGGKEVAVEGSWDNWKSK 136
           IPTMITW HGGKE+AVEGSWDNWK++
Sbjct: 74  IPTMITWCHGGKEIAVEGSWDNWKTR 99

[Close]

BLAST of Carg00512 vs. TAIR10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 71.2 bits (173), Expect = 5.9e-13
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 66  IPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGGKEVAV 125
           +P+  +    VPV PL R +  P ++  W  +  +FD+   EQGIPT+ITW+ GG +VAV
Sbjct: 94  VPNGCISCRMVPVAPLQRANAPPPNNIQWNQSQRVFDN-PPEQGIPTIITWNQGGNDVAV 153

Query: 126 EGSWDNWKSK 136
           EGSWDNW+S+
Sbjct: 154 EGSWDNWRSR 162

[Close]

BLAST of Carg00512 vs. Swiss-Prot
Match: sp|Q9SCY5|KINB2_ARATH (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.4e-33
Identity = 78/137 (56.93%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 1   MGNVNGREDEDA-NPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSP 60
           MGNVN RE+ ++ N S VE+ED E+ SR     + ++A  D +        P ELMG SP
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAEICSR-----EAMSAASDGN-----HVAPPELMGQSP 60

Query: 61  PRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQGIPTMITWSH 120
           P SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQGIPTMITW H
Sbjct: 61  PHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCH 120

Query: 121 GGKEVAVEGSWDNWKSK 136
           GGKE+AVEGSWDNWK++
Sbjct: 121 GGKEIAVEGSWDNWKTR 127

[Close]

BLAST of Carg00512 vs. Swiss-Prot
Match: sp|Q84VQ1|KINB1_ARATH (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 62  SPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGGK 121
           SP   PSP +F PQVPV PL R +  P ++  W  +  +FD+   EQGIPT+ITW+ GG 
Sbjct: 53  SPARSPSPFLFAPQVPVAPLQRANAPPPNNIQWNQSQRVFDN-PPEQGIPTIITWNQGGN 112

Query: 122 EVAVEGSWDNWKSK 136
           +VAVEGSWDNW+S+
Sbjct: 113 DVAVEGSWDNWRSR 125

[Close]

BLAST of Carg00512 vs. TrEMBL
Match: tr|A0A0A0KH57|A0A0A0KH57_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.0e-55
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPS        VG RR SLPDGL+ PPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSXXXXXXXXVGGRRSSLPDGLSVPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPVVPLPRPDE+ +SS+SWM+NSS FD+V SEQGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVVPLPRPDEVHSSSQSWMHNSSWFDEVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWK K
Sbjct: 121 KEVAVEGSWDNWKMK 135

[Close]

BLAST of Carg00512 vs. TrEMBL
Match: tr|A0A1S3B352|A0A1S3B352_CUCME (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103485228 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.4e-55
Identity = 107/135 (79.26%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPS         G RR SLPDGLAAPPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSXXXXXXXXXGGRRSSLPDGLAAPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPV+PLPRPDE+ +SS+SWM+NSS FD+V S+QGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVIPLPRPDEVHSSSQSWMHNSSWFDEVGSDQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWK K
Sbjct: 121 KEVAVEGSWDNWKMK 135

[Close]

BLAST of Carg00512 vs. TrEMBL
Match: tr|A0A058ZW30|A0A058ZW30_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_L00156 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-35
Identity = 83/135 (61.48%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGRED   +PSGV+EE    G    S+ D + AP +A + Y     P ELMG SPP
Sbjct: 1   MGNVNGREDGVGSPSGVDEEGG--GGGDGSVQDSMGAPDEALVGYTA---PAELMGQSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SPRA  SPLMF PQVPV PL RPDE+  S  SWM  SS ++D  SEQGIPTMITW +GG
Sbjct: 61  HSPRATQSPLMFAPQVPVAPLHRPDEMHGSGPSWMQTSSGYEDACSEQGIPTMITWCYGG 120

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWK++
Sbjct: 121 KEVAVEGSWDNWKTR 130

[Close]

BLAST of Carg00512 vs. TrEMBL
Match: tr|W9QZA1|W9QZA1_9ROSA (SNF1-related protein kinase regulatory subunit beta-2 OS=Morus notabilis OX=981085 GN=L484_010610 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-33
Identity = 82/140 (58.57%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVN RED   +PSG EE+              +   P A   ++T    +ELMG SPP
Sbjct: 1   MGNVNAREDGSGSPSGAEEDG----------GGSVQEEPMASHGHVTPGGSSELMGQSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SPRA  SPLMFTPQVPVVPL RPDE   +S SWM  SS F+D+S EQGIPTMITW +GG
Sbjct: 61  HSPRATHSPLMFTPQVPVVPLQRPDESHIASSSWMQTSSGFEDMSYEQGIPTMITWPYGG 120

Query: 121 KEVAVEGSWDNWKSKFVALF 141
           KEVAVEGSWDNWK+ F  LF
Sbjct: 121 KEVAVEGSWDNWKTSFYVLF 130

[Close]

BLAST of Carg00512 vs. TrEMBL
Match: tr|A0A2P5X8G1|A0A2P5X8G1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA21048 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 76/135 (56.30%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGRED   +PSG+EEE+    +R  S+ + +AAP                MGHSPP
Sbjct: 1   MGNVNGREDGSNSPSGIEEEE----TRANSVLEAMAAP----------------MGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SP +  SPLMFTPQVPVVPL RPDE+  SS SWM ++  ++D  +E+GIPTMITW +GG
Sbjct: 61  HSPTSTHSPLMFTPQVPVVPLQRPDEMHGSSPSWMQSAIGYEDGCTEKGIPTMITWGYGG 115

Query: 121 KEVAVEGSWDNWKSK 136
           KEVAVEGSWDNWK++
Sbjct: 121 KEVAVEGSWDNWKTR 115

The following BLAST results are available for this feature:

BLAST of Carg00512 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949884.1	1.0e-71	100.00	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata]	[more]
XP_023543083.1	1.0e-71	100.00	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp...	[more]
XP_022977712.1	9.7e-70	97.04	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima]	[more]
XP_004134805.1	3.0e-55	80.00	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativu...	[more]
XP_008440979.1	5.2e-55	79.26	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis m...	[more]

BLAST of Carg00512 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16360.3	2.4e-30	69.77	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	5.9e-13	47.14	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

BLAST of Carg00512 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SCY5\|KINB2_ARATH	8.4e-33	56.93	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
sp\|Q84VQ1\|KINB1_ARATH	1.9e-16	54.05	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg00512 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KH57\|A0A0A0KH57_CUCSA	2.0e-55	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=4 SV=1	[more]
tr\|A0A1S3B352\|A0A1S3B352_CUCME	3.4e-55	79.26	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=36...	[more]
tr\|A0A058ZW30\|A0A058ZW30_EUCGR	3.0e-35	61.48	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_L00156 PE=4 SV...	[more]
tr\|W9QZA1\|W9QZA1_9ROSA	2.8e-33	58.57	SNF1-related protein kinase regulatory subunit beta-2 OS=Morus notabilis OX=9810...	[more]
tr\|A0A2P5X8G1\|A0A2P5X8G1_GOSBA	1.5e-31	56.30	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA21048 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014756	Ig_E-set
IPR030070	KINB2
IPR032640	AMPK1_CBM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00512-RA	Carg00512-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 110..136 e-value: 2.0E-8 score: 34.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR10343	5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT	coord: 1..135
IPR030070	SNF1-related protein kinase regulatory subunit beta-2	PANTHER	PTHR10343:SF66	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2	coord: 1..135
IPR014756	Immunoglobulin E-set	SUPERFAMILY	SSF81296	E set domains	coord: 108..137

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00512	Cp4.1LG20g06550	Cucurbita pepo (Zucchini)	carcpeB0564

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00512	Carg07888	Silver-seed gourd	carcarB425

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00512	Wax gourd	carwgoB0488
Carg00512	Cucumber (Gy14) v2	carcgybB0408
Carg00512	Cucumber (Gy14) v2	carcgybB0418
Carg00512	Cucumber (Gy14) v1	carcgyB0466
Carg00512	Cucurbita maxima (Rimu)	carcmaB0562
Carg00512	Cucurbita maxima (Rimu)	carcmaB0567
Carg00512	Cucurbita maxima (Rimu)	carcmaB0571
Carg00512	Cucurbita moschata (Rifu)	carcmoB0551
Carg00512	Cucurbita moschata (Rifu)	carcmoB0554
Carg00512	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00512	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00512	Wild cucumber (PI 183967)	carcpiB0435
Carg00512	Wild cucumber (PI 183967)	carcpiB0446
Carg00512	Cucumber (Chinese Long) v2	carcuB0441
Carg00512	Cucumber (Chinese Long) v3	carcucB0442
Carg00512	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00512	Melon (DHL92) v3.5.1	carmeB0414
Carg00512	Melon (DHL92) v3.6.1	carmedB0418
Carg00512	Watermelon (Charleston Gray)	carwcgB0397
Carg00512	Watermelon (97103) v1	carwmB0407
Carg00512	Watermelon (97103) v2	carwmbB0425
Carg00512	Watermelon (97103) v2	carwmbB0426