Carg00168 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00168
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Expansin
Location	Cucurbita_argyrosperma_scaffold_001 : 877476 .. 878789 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTAACCCACAAACCCCACTTTTCATTACACTTTTAAACCAACCCTATGGCCTTTTACTCGCCATTTTCCCTCCTTCCTCTCTTCTTCCTCTTCCTCCTCCTCCGCTCCACGGTTGCCGACTACGGCGGCTGGCAGAGCGGCCATGCCACCTTTTACGGTGGCGGTGACGCGTCTGGTACTATGGGTATGTCTCTGTATACTTAAAACCCACGTAAATGGTTTAGTACGTTTTTAATCATGGAAGGACATGGTTTGCTTCGAGTTGTTTCTTACTAGTTTAAATTTGGATATTGGAGAAAATAGACATTTTCAATTTTTAAACTGAATTTTTTTACCACTAGTAAAAAAAATTGACTCTAAAAACATAGTAAAATTATATTAGAACATAAGACGTGGTTAGATTAAAATAAGCGGTTGGTAGTGAGATTACGAGGATGATAATTAAATGTAGGTGGAGCTTGTGGGTATGGGAACTTGTACAGCCAAGGGTATGGCACCAACACGGTGGCGCTAAGCACGGCGCTGTTCAACAACGGCCTCAGCTGTGGGGCTTGCTTTGAAATGACTTGCACAAATGATCCCAAATGGTGCCTGCCCGGAACCATTAGGGTCACCGCCACCAACTTCTGCCCCCCCAACTTTGCCCTCCCCAACAACAACGGCGGCTGGTGCAACCCTCCTCTCCAGCACTTCGACATGGCTGAGCCTGCCTTCCTTCAGATCGCTCAATACCGTGCCGGAATCGTCCCCGTCTCCTTTCGGAGGTAAACCCGACCCCTTTTCTACGGTTACTAACGTCTTAATAGTTGAATTTTAAAAAATTTTAATGTGTACGGACTAAATTGTTATAAACTAAAATTGAATGATTAACTTTTTCAACAGAGTGCCATGCATGAAGAAAGGTGGGGTGAGGTTCACAATTAACGGTCACTCCTATTTCAACCTTGTTTTGATCACGAACGTCGGCGGTGCTGGCGACGTCCACGCCGTGTCGATAAAGGGGTCTCGAACTGGATGGCAAGCGATGTCTAGAAATTGGGGCCAAAACTGGCAAAGCAACAACTACCTCAACGGTCAAGGCCTCTCCTTTCAGGTCACCCTTAGCGATGGTCGCACTCTCACGGCCTATAATCTCGTCCCGTCCAATTGGCAGTTCGGTCGGACCTATGAAGGCCCTCAATTTTAAACACCAACCACTATTATAACTACTACTTCAAAAACAAACACACAAACACAAACAACGAGAACGAGATCGAAGATCAAGGATCGAAAGTCGGAGAATTTTGCTTTCTTTTTCAAGTTTTTATTGAA

mRNA sequence

CTTCTAACCCACAAACCCCACTTTTCATTACACTTTTAAACCAACCCTATGGCCTTTTACTCGCCATTTTCCCTCCTTCCTCTCTTCTTCCTCTTCCTCCTCCTCCGCTCCACGGTTGCCGACTACGGCGGCTGGCAGAGCGGCCATGCCACCTTTTACGGTGGCGGTGACGCGTCTGGTACTATGGGTGGAGCTTGTGGGTATGGGAACTTGTACAGCCAAGGGTATGGCACCAACACGGTGGCGCTAAGCACGGCGCTGTTCAACAACGGCCTCAGCTGTGGGGCTTGCTTTGAAATGACTTGCACAAATGATCCCAAATGGTGCCTGCCCGGAACCATTAGGGTCACCGCCACCAACTTCTGCCCCCCCAACTTTGCCCTCCCCAACAACAACGGCGGCTGGTGCAACCCTCCTCTCCAGCACTTCGACATGGCTGAGCCTGCCTTCCTTCAGATCGCTCAATACCGTGCCGGAATCGTCCCCGTCTCCTTTCGGAGAGTGCCATGCATGAAGAAAGGTGGGGTGAGGTTCACAATTAACGGTCACTCCTATTTCAACCTTGTTTTGATCACGAACGTCGGCGGTGCTGGCGACGTCCACGCCGTGTCGATAAAGGGGTCTCGAACTGGATGGCAAGCGATGTCTAGAAATTGGGGCCAAAACTGGCAAAGCAACAACTACCTCAACGGTCAAGGCCTCTCCTTTCAGGTCACCCTTAGCGATGGTCGCACTCTCACGGCCTATAATCTCGTCCCGTCCAATTGGCAGTTCGGTCGGACCTATGAAGGCCCTCAATTTTAAACACCAACCACTATTATAACTACTACTTCAAAAACAAACACACAAACACAAACAACGAGAACGAGATCGAAGATCAAGGATCGAAAGTCGGAGAATTTTGCTTTCTTTTTCAAGTTTTTATTGAA

Coding sequence (CDS)

ATGGCCTTTTACTCGCCATTTTCCCTCCTTCCTCTCTTCTTCCTCTTCCTCCTCCTCCGCTCCACGGTTGCCGACTACGGCGGCTGGCAGAGCGGCCATGCCACCTTTTACGGTGGCGGTGACGCGTCTGGTACTATGGGTGGAGCTTGTGGGTATGGGAACTTGTACAGCCAAGGGTATGGCACCAACACGGTGGCGCTAAGCACGGCGCTGTTCAACAACGGCCTCAGCTGTGGGGCTTGCTTTGAAATGACTTGCACAAATGATCCCAAATGGTGCCTGCCCGGAACCATTAGGGTCACCGCCACCAACTTCTGCCCCCCCAACTTTGCCCTCCCCAACAACAACGGCGGCTGGTGCAACCCTCCTCTCCAGCACTTCGACATGGCTGAGCCTGCCTTCCTTCAGATCGCTCAATACCGTGCCGGAATCGTCCCCGTCTCCTTTCGGAGAGTGCCATGCATGAAGAAAGGTGGGGTGAGGTTCACAATTAACGGTCACTCCTATTTCAACCTTGTTTTGATCACGAACGTCGGCGGTGCTGGCGACGTCCACGCCGTGTCGATAAAGGGGTCTCGAACTGGATGGCAAGCGATGTCTAGAAATTGGGGCCAAAACTGGCAAAGCAACAACTACCTCAACGGTCAAGGCCTCTCCTTTCAGGTCACCCTTAGCGATGGTCGCACTCTCACGGCCTATAATCTCGTCCCGTCCAATTGGCAGTTCGGTCGGACCTATGAAGGCCCTCAATTTTAA

Protein sequence

MAFYSPFSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTYEGPQF

Homology

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BLAST of Carg00168 vs. NCBI nr
Match: XP_022943120.1 (expansin-A8-like [Cucurbita moschata])

HSP 1 Score: 525.0 bits (1351), Expect = 1.4e-145
Identity = 249/251 (99.20%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MAFYSPFSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 60
           MAFYSPFSLLPLFFLF  LRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY
Sbjct: 1   MAFYSPFSLLPLFFLF--LRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 60

Query: 61  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 120
           GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC
Sbjct: 61  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 120

Query: 121 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 180
           NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG
Sbjct: 121 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 180

Query: 181 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 240
           AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW
Sbjct: 181 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 240

Query: 241 QFGRTYEGPQF 252
           QFGRTYEGPQF
Sbjct: 241 QFGRTYEGPQF 249

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BLAST of Carg00168 vs. NCBI nr
Match: XP_023518401.1 (expansin-A8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.9 bits (1348), Expect = 3.1e-145
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MAFYSPFSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 60
           MAFYSPFSLLPLFFLF  LRST+ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY
Sbjct: 1   MAFYSPFSLLPLFFLF--LRSTLADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 60

Query: 61  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 120
           GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC
Sbjct: 61  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 120

Query: 121 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 180
           NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG
Sbjct: 121 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 180

Query: 181 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 240
           AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW
Sbjct: 181 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 240

Query: 241 QFGRTYEGPQF 252
           QFGRTYEGPQF
Sbjct: 241 QFGRTYEGPQF 249

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BLAST of Carg00168 vs. NCBI nr
Match: XP_022989773.1 (expansin-A8-like [Cucurbita maxima])

HSP 1 Score: 523.1 bits (1346), Expect = 5.3e-145
Identity = 248/251 (98.80%), Postives = 248/251 (98.80%), Query Frame = 0


Query: 1   MAFYSPFSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 60
           MAFYSPFSLLPLFFLF  LRST ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY
Sbjct: 1   MAFYSPFSLLPLFFLF--LRSTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 60

Query: 61  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 120
           GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC
Sbjct: 61  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 120

Query: 121 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 180
           NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG
Sbjct: 121 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 180

Query: 181 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 240
           AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW
Sbjct: 181 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 240

Query: 241 QFGRTYEGPQF 252
           QFGRTYEGPQF
Sbjct: 241 QFGRTYEGPQF 249

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BLAST of Carg00168 vs. NCBI nr
Match: NP_001267550.1 (expansin-A8-like precursor [Cucumis sativus] >AAB37746.1 expansin S1 precursor [Cucumis sativus] >KGN50732.1 Expansin S1 [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 4.8e-138
Identity = 240/255 (94.12%), Postives = 244/255 (95.69%), Query Frame = 0


Query: 1   MAF-YSPFS---LLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLY 60
           MAF YSPFS   LLP FF+F     T ADYGGWQSGHATFYGGGDASGTMGGACGYGNLY
Sbjct: 1   MAFSYSPFSSLFLLPFFFVF-----TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLY 60

Query: 61  SQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNN 120
           SQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNN
Sbjct: 61  SQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNN 120

Query: 121 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLIT 180
           GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLIT
Sbjct: 121 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLIT 180

Query: 181 NVGGAGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLV 240
           NVGGAGDVH+VSIKGSRTGWQ+MSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLV
Sbjct: 181 NVGGAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLV 240

Query: 241 PSNWQFGRTYEGPQF 252
           PSNWQFG+TYEGPQF
Sbjct: 241 PSNWQFGQTYEGPQF 250

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BLAST of Carg00168 vs. NCBI nr
Match: XP_008456949.1 (PREDICTED: expansin-A8-like [Cucumis melo])

HSP 1 Score: 500.0 bits (1286), Expect = 4.8e-138
Identity = 238/251 (94.82%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 4   YSPFS---LLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 63
           YSPFS   LLPLFF+F     T ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY
Sbjct: 7   YSPFSSLFLLPLFFVF-----TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 66

Query: 64  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 123
           GTNTVALST LFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC
Sbjct: 67  GTNTVALSTTLFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 126

Query: 124 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 183
           NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG
Sbjct: 127 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 186

Query: 184 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 243
           AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDG TLTAYNLVPSNW
Sbjct: 187 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNW 246

Query: 244 QFGRTYEGPQF 252
           QFG+TYEGPQF
Sbjct: 247 QFGQTYEGPQF 252

[Close]

BLAST of Carg00168 vs. TAIR10
Match: AT2G40610.1 (expansin A8)

HSP 1 Score: 416.0 bits (1068), Expect = 1.6e-116
Identity = 195/249 (78.31%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 4   YSPFSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 63
           Y  +S++ +  + L L+ T  D GGWQ GHATFYGG DASGTMGGACGYGNLY QGYGTN
Sbjct: 6   YLKYSIISIISV-LFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTN 65

Query: 64  TVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 123
           T ALSTALFNNGL+CGAC+EM C +DP+WCL  TI VTATNFCPPN  L N+NGGWCNPP
Sbjct: 66  TAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPP 125

Query: 124 LQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGD 183
           LQHFD+AEPAFLQIAQYRAGIVPVSFRRVPCMKKGG+RFTINGHSYFNLVLI+NVGGAGD
Sbjct: 126 LQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGD 185

Query: 184 VHAVSIKGSRT-GWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQF 243
           VHAVSIKGS+T  WQAMSRNWGQNWQSN+Y+N Q LSFQVT SDGRTL + ++ PSNWQF
Sbjct: 186 VHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQF 245

Query: 244 GRTYEGPQF 252
           G+TY+G QF
Sbjct: 246 GQTYQGGQF 253

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BLAST of Carg00168 vs. TAIR10
Match: AT1G26770.2 (expansin A10)

HSP 1 Score: 401.4 bits (1030), Expect = 4.2e-112
Identity = 181/235 (77.02%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 18  LLRSTVADY-GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGL 77
           ++ S+V+ Y GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGT+T ALSTALFNNGL
Sbjct: 24  VMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGL 83

Query: 78  SCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQ 137
           SCG+CFE+ C ND KWCLPG+I VTATNFCPPN AL NNNGGWCNPPL+HFD+A+P F +
Sbjct: 84  SCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQR 143

Query: 138 IAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGW 197
           IAQYRAGIVPVS+RRVPC ++GG+RFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT W
Sbjct: 144 IAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVW 203

Query: 198 QAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTYEGPQF 252
           QAMSRNWGQNWQSN+YLNGQ LSF+VT SDGRT+ ++N  P+ W +G+T+ G QF
Sbjct: 204 QAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 258

[Close]

BLAST of Carg00168 vs. TAIR10
Match: AT1G69530.3 (expansin A1)

HSP 1 Score: 391.0 bits (1003), Expect = 5.7e-109
Identity = 174/220 (79.09%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 27  GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTC 86
           GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTALFNNGLSCGACFE+ C
Sbjct: 25  GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRC 84

Query: 87  TNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVP 146
            ND KWCLPG+I VTATNFCPPN ALPNN GGWCNPP QHFD+++P F +IAQYRAGIVP
Sbjct: 85  QNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVP 144

Query: 147 VSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQAMSRNWGQN 206
           V++RRVPC+++GG+RFTINGHSYFNLVLITNVGGAGDVH+  +KGSRTGWQAMSRNWGQN
Sbjct: 145 VAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQN 204

Query: 207 WQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTY 247
           WQSN+YLNGQ LSF+VT SDG+T+ + N+  + W FG+T+
Sbjct: 205 WQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTF 244

[Close]

BLAST of Carg00168 vs. TAIR10
Match: AT2G03090.1 (expansin A15)

HSP 1 Score: 391.0 bits (1003), Expect = 5.7e-109
Identity = 177/239 (74.06%), Postives = 204/239 (85.36%), Query Frame = 0


Query: 14  FLFLLLRSTVADY-GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALF 73
           F F  +  +V  Y  GW + HATFYGG DASGTMGGACGYGNLYSQGYGTNT ALSTALF
Sbjct: 14  FCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALF 73

Query: 74  NNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEP 133
           NNGLSCGACFE+ C +D  WCLPG I VTATNFCPPN ALPNN GGWCNPPL HFD+++P
Sbjct: 74  NNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQP 133

Query: 134 AFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS 193
            F +IAQY+AG+VPVS+RRVPCM++GG+RFTINGHSYFNLVL+TNVGGAGDVH+V++KGS
Sbjct: 134 VFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGS 193

Query: 194 RTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTYEGPQF 252
           RT WQ MSRNWGQNWQSNN LNGQ LSF+VT SDGRT+ + N+ P++W FG+T+ G QF
Sbjct: 194 RTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQF 252

[Close]

BLAST of Carg00168 vs. TAIR10
Match: AT5G05290.1 (expansin A2)

HSP 1 Score: 387.5 bits (994), Expect = 6.3e-108
Identity = 183/250 (73.20%), Postives = 210/250 (84.00%), Query Frame = 0


Query: 4   YSPFSLLPLFFL-FLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGT 63
           YS    L L  L F L      D GGW+ GHATFYGG DASGTMGGACGYGNL+SQGYG 
Sbjct: 6   YSHILFLSLCTLNFCLYSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGL 65

Query: 64  NTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNP 123
            T ALSTALFN+G  CGACFE+ C +DP+WC+PG+I V+ATNFCPPNFAL N+NGGWCNP
Sbjct: 66  QTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNP 125

Query: 124 PLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAG 183
           PL+HFD+AEPAFLQIAQYRAGIVPV+FRRVPC K GG+RFTING+ YF+LVLITNVGGAG
Sbjct: 126 PLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAG 185

Query: 184 DVHAVSIKGSRTG-WQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQ 243
           D+ AVS+KGS+T  WQ+MSRNWGQNWQSN YL GQ LSFQVT SDGRT+ +Y++VP +WQ
Sbjct: 186 DIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQ 245

Query: 244 FGRTYEGPQF 252
           FG+T+EG QF
Sbjct: 246 FGQTFEGGQF 255

[Close]

BLAST of Carg00168 vs. Swiss-Prot
Match: sp|O22874|EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.0e-115
Identity = 195/249 (78.31%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 4   YSPFSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 63
           Y  +S++ +  + L L+ T  D GGWQ GHATFYGG DASGTMGGACGYGNLY QGYGTN
Sbjct: 6   YLKYSIISIISV-LFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTN 65

Query: 64  TVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 123
           T ALSTALFNNGL+CGAC+EM C +DP+WCL  TI VTATNFCPPN  L N+NGGWCNPP
Sbjct: 66  TAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPP 125

Query: 124 LQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGD 183
           LQHFD+AEPAFLQIAQYRAGIVPVSFRRVPCMKKGG+RFTINGHSYFNLVLI+NVGGAGD
Sbjct: 126 LQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGD 185

Query: 184 VHAVSIKGSRT-GWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQF 243
           VHAVSIKGS+T  WQAMSRNWGQNWQSN+Y+N Q LSFQVT SDGRTL + ++ PSNWQF
Sbjct: 186 VHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQF 245

Query: 244 GRTYEGPQF 252
           G+TY+G QF
Sbjct: 246 GQTYQGGQF 253

[Close]

BLAST of Carg00168 vs. Swiss-Prot
Match: sp|Q40636|EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 404.4 bits (1038), Expect = 8.9e-112
Identity = 185/245 (75.51%), Postives = 211/245 (86.12%), Query Frame = 0


Query: 8   SLLPLFFLF-LLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVA 67
           +LL LF  F  L R   ADYG WQS HATFYGGGDASGTMGGACGYGNLYS GYGTNT A
Sbjct: 7   ALLLLFSAFCFLARRAAADYGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAA 66

Query: 68  LSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQH 127
           LST LFN+G +CG+C+E+ C ND +WCLPG++ VTATN CPPN+ALPN++GGWCNPP  H
Sbjct: 67  LSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPH 126

Query: 128 FDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHA 187
           FDMAEPAFLQI  YRAGIVPVS+RRVPC+KKGG+RFTINGHSYFNLVL+TNV G GDV +
Sbjct: 127 FDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQS 186

Query: 188 VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTY 247
           VSIKGS TGWQ MSRNWGQNWQSN+YL+GQ LSFQV +SDGRT+T+ N+VP+ WQFG+T+
Sbjct: 187 VSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTF 246

Query: 248 EGPQF 252
           EG QF
Sbjct: 247 EGGQF 251

[Close]

BLAST of Carg00168 vs. Swiss-Prot
Match: sp|A2Y5R6|EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica OX=39946 GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.6e-111
Identity = 185/240 (77.08%), Postives = 209/240 (87.08%), Query Frame = 0


Query: 12  LFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTAL 71
           LF LFL  +++ A YGGWQS HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTAL
Sbjct: 7   LFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTAL 66

Query: 72  FNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAE 131
           FN+G +CG+C+E+ C N    CLPG+I VTATNFCPPN+ LP+++GGWCNPP  HFDMAE
Sbjct: 67  FNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAE 126

Query: 132 PAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 191
           PAFL IAQYRAGIVPVSFRRVPC+KKGGVRFT+NGHSYFNLVL+TNV GAGDV +VSIKG
Sbjct: 127 PAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKG 186

Query: 192 SRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTYEGPQF 251
           SRTGWQ MSRNWGQNWQSN +L+GQ LSFQVT SDGRT+T+ N+    WQFG+T+EG QF
Sbjct: 187 SRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246

[Close]

BLAST of Carg00168 vs. Swiss-Prot
Match: sp|Q0DHB7|EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.6e-111
Identity = 185/240 (77.08%), Postives = 209/240 (87.08%), Query Frame = 0


Query: 12  LFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTAL 71
           LF LFL  +++ A YGGWQS HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTAL
Sbjct: 7   LFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTAL 66

Query: 72  FNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAE 131
           FN+G +CG+C+E+ C N    CLPG+I VTATNFCPPN+ LP+++GGWCNPP  HFDMAE
Sbjct: 67  FNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAE 126

Query: 132 PAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 191
           PAFL IAQYRAGIVPVSFRRVPC+KKGGVRFT+NGHSYFNLVL+TNV GAGDV +VSIKG
Sbjct: 127 PAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKG 186

Query: 192 SRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTYEGPQF 251
           SRTGWQ MSRNWGQNWQSN +L+GQ LSFQVT SDGRT+T+ N+    WQFG+T+EG QF
Sbjct: 187 SRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246

[Close]

BLAST of Carg00168 vs. Swiss-Prot
Match: sp|Q9LDR9|EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 7.6e-111
Identity = 181/235 (77.02%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 18  LLRSTVADY-GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGL 77
           ++ S+V+ Y GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGT+T ALSTALFNNGL
Sbjct: 14  VMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGL 73

Query: 78  SCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQ 137
           SCG+CFE+ C ND KWCLPG+I VTATNFCPPN AL NNNGGWCNPPL+HFD+A+P F +
Sbjct: 74  SCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQR 133

Query: 138 IAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGW 197
           IAQYRAGIVPVS+RRVPC ++GG+RFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT W
Sbjct: 134 IAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVW 193

Query: 198 QAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTYEGPQF 252
           QAMSRNWGQNWQSN+YLNGQ LSF+VT SDGRT+ ++N  P+ W +G+T+ G QF
Sbjct: 194 QAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 248

[Close]

BLAST of Carg00168 vs. TrEMBL
Match: tr|Q39625|Q39625_CUCSA (Expansin OS=Cucumis sativus OX=3659 GN=Cs-EXPA1 PE=2 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 3.2e-138
Identity = 240/255 (94.12%), Postives = 244/255 (95.69%), Query Frame = 0


Query: 1   MAF-YSPFS---LLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLY 60
           MAF YSPFS   LLP FF+F     T ADYGGWQSGHATFYGGGDASGTMGGACGYGNLY
Sbjct: 1   MAFSYSPFSSLFLLPFFFVF-----TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLY 60

Query: 61  SQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNN 120
           SQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNN
Sbjct: 61  SQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNN 120

Query: 121 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLIT 180
           GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLIT
Sbjct: 121 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLIT 180

Query: 181 NVGGAGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLV 240
           NVGGAGDVH+VSIKGSRTGWQ+MSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLV
Sbjct: 181 NVGGAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLV 240

Query: 241 PSNWQFGRTYEGPQF 252
           PSNWQFG+TYEGPQF
Sbjct: 241 PSNWQFGQTYEGPQF 250

[Close]

BLAST of Carg00168 vs. TrEMBL
Match: tr|A0A1S3C3Z2|A0A1S3C3Z2_CUCME (Expansin OS=Cucumis melo OX=3656 GN=LOC103496743 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 3.2e-138
Identity = 238/251 (94.82%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 4   YSPFS---LLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 63
           YSPFS   LLPLFF+F     T ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY
Sbjct: 7   YSPFSSLFLLPLFFVF-----TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 66

Query: 64  GTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 123
           GTNTVALST LFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC
Sbjct: 67  GTNTVALSTTLFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWC 126

Query: 124 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 183
           NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG
Sbjct: 127 NPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGG 186

Query: 184 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNW 243
           AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDG TLTAYNLVPSNW
Sbjct: 187 AGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNW 246

Query: 244 QFGRTYEGPQF 252
           QFG+TYEGPQF
Sbjct: 247 QFGQTYEGPQF 252

[Close]

BLAST of Carg00168 vs. TrEMBL
Match: tr|A0A2C9VLG6|A0A2C9VLG6_MANES (Expansin OS=Manihot esculenta OX=3983 GN=MANES_07G140700 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 6.8e-125
Identity = 212/250 (84.80%), Postives = 228/250 (91.20%), Query Frame = 0


Query: 2   AFYSPFSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYG 61
           A +S  SLL LF L L  R T  DYGGWQ GHATFYGGGDASGTMGGACGYGNLYSQGYG
Sbjct: 4   AAFSAISLL-LFVLNLCFRGTFGDYGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYG 63

Query: 62  TNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCN 121
           TNT ALSTALFN+GLSCGAC+EM C NDPKWCLPGTI VTATNFCPPN+AL N+NGGWCN
Sbjct: 64  TNTAALSTALFNSGLSCGACYEMRCDNDPKWCLPGTITVTATNFCPPNYALSNDNGGWCN 123

Query: 122 PPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGA 181
           PPLQHFD+AEPAFLQIAQYRAGIVP+SFRRVPCMKKGG+RFTINGHSYFNLVL+TNVGGA
Sbjct: 124 PPLQHFDLAEPAFLQIAQYRAGIVPISFRRVPCMKKGGIRFTINGHSYFNLVLVTNVGGA 183

Query: 182 GDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQ 241
           GDVHAVSIKGS+TGWQAMSRNWGQNWQSN  LNGQ LSFQVT SDGRT+T+YN+VP+NWQ
Sbjct: 184 GDVHAVSIKGSKTGWQAMSRNWGQNWQSNGILNGQSLSFQVTTSDGRTVTSYNIVPANWQ 243

Query: 242 FGRTYEGPQF 252
           FG+T+EG QF
Sbjct: 244 FGQTFEGGQF 252

[Close]

BLAST of Carg00168 vs. TrEMBL
Match: tr|A0A1U7ZK92|A0A1U7ZK92_NELNU (Expansin OS=Nelumbo nucifera OX=4432 GN=LOC104593779 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 2.0e-124
Identity = 211/248 (85.08%), Postives = 225/248 (90.73%), Query Frame = 0


Query: 7   FSLLPLFFLFLL---LRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 66
           F  LPLF   LL   LR T  DYGGW+ GHATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 6   FPALPLFLFSLLSLCLRGTFGDYGGWEGGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 65

Query: 67  TVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 126
           T ALSTALFNNGLSCGAC+EM C +DPKWCLPGTI VTATNFCPPNFAL N+NGGWCNPP
Sbjct: 66  TAALSTALFNNGLSCGACYEMKCNDDPKWCLPGTITVTATNFCPPNFALANDNGGWCNPP 125

Query: 127 LQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGD 186
           LQHFDMAEPAFLQIAQYRAGIVPV+FRRVPC+KKGG+RFTINGHSYFNLVLITNV GAGD
Sbjct: 126 LQHFDMAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGD 185

Query: 187 VHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFG 246
           VHAVSIKGSRTGWQAMSRNWGQNWQSN+YLNGQ LSFQVT SDGRT+T+YN+ P+ WQFG
Sbjct: 186 VHAVSIKGSRTGWQAMSRNWGQNWQSNSYLNGQTLSFQVTTSDGRTITSYNVAPAGWQFG 245

Query: 247 RTYEGPQF 252
           +T+EG QF
Sbjct: 246 QTFEGAQF 253

[Close]

BLAST of Carg00168 vs. TrEMBL
Match: tr|B9I6V6|B9I6V6_POPTR (Expansin OS=Populus trichocarpa OX=3694 GN=POPTR_013G154700v3 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.8e-124
Identity = 208/245 (84.90%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 7   FSLLPLFFLFLLLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVA 66
           F+   L F+ L L+S +ADYGGWQ GHATFYGGGDA+GTMGGACGYGNLYSQGYGT+T A
Sbjct: 6   FASCLLLFICLHLQSILADYGGWQGGHATFYGGGDATGTMGGACGYGNLYSQGYGTSTAA 65

Query: 67  LSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQH 126
           LSTALFNNGLSCGAC+EM C +DPKWCLPGTI VTATNFCPPN +LPNNNGGWCNPPLQH
Sbjct: 66  LSTALFNNGLSCGACYEMRCDDDPKWCLPGTITVTATNFCPPNPSLPNNNGGWCNPPLQH 125

Query: 127 FDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVGGAGDVHA 186
           FDMAEPAFLQIAQYRAGIVPV+FRRVPC+KKGG+RFTINGHSYFNLVLITNVGGAGDVH+
Sbjct: 126 FDMAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVHS 185

Query: 187 VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSNWQFGRTY 246
           VSIKGS+TGWQAMSRNWGQNWQSNNYLNGQ LSFQVT SDGRT+T+YN VP+ WQFG+T+
Sbjct: 186 VSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYNAVPAGWQFGQTF 245

Query: 247 EGPQF 252
           EG QF
Sbjct: 246 EGGQF 250

The following BLAST results are available for this feature:

BLAST of Carg00168 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943120.1	1.4e-145	99.20	expansin-A8-like [Cucurbita moschata]	[more]
XP_023518401.1	3.1e-145	98.80	expansin-A8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989773.1	5.3e-145	98.80	expansin-A8-like [Cucurbita maxima]	[more]
NP_001267550.1	4.8e-138	94.12	expansin-A8-like precursor [Cucumis sativus] >AAB37746.1 expansin S1 precursor [...	[more]
XP_008456949.1	4.8e-138	94.82	PREDICTED: expansin-A8-like [Cucumis melo]	[more]

BLAST of Carg00168 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40610.1	1.6e-116	78.31	expansin A8	[more]
AT1G26770.2	4.2e-112	77.02	expansin A10	[more]
AT1G69530.3	5.7e-109	79.09	expansin A1	[more]
AT2G03090.1	5.7e-109	74.06	expansin A15	[more]
AT5G05290.1	6.3e-108	73.20	expansin A2	[more]

BLAST of Carg00168 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22874\|EXPA8_ARATH	3.0e-115	78.31	Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1	[more]
sp\|Q40636\|EXPA2_ORYSJ	8.9e-112	75.51	Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2	[more]
sp\|A2Y5R6\|EXPA4_ORYSI	2.6e-111	77.08	Expansin-A4 OS=Oryza sativa subsp. indica OX=39946 GN=EXPA4 PE=2 SV=1	[more]
sp\|Q0DHB7\|EXPA4_ORYSJ	2.6e-111	77.08	Expansin-A4 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA4 PE=2 SV=1	[more]
sp\|Q9LDR9\|EXP10_ARATH	7.6e-111	77.02	Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1	[more]

BLAST of Carg00168 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|Q39625\|Q39625_CUCSA	3.2e-138	94.12	Expansin OS=Cucumis sativus OX=3659 GN=Cs-EXPA1 PE=2 SV=1	[more]
tr\|A0A1S3C3Z2\|A0A1S3C3Z2_CUCME	3.2e-138	94.82	Expansin OS=Cucumis melo OX=3656 GN=LOC103496743 PE=3 SV=1	[more]
tr\|A0A2C9VLG6\|A0A2C9VLG6_MANES	6.8e-125	84.80	Expansin OS=Manihot esculenta OX=3983 GN=MANES_07G140700 PE=3 SV=1	[more]
tr\|A0A1U7ZK92\|A0A1U7ZK92_NELNU	2.0e-124	85.08	Expansin OS=Nelumbo nucifera OX=4432 GN=LOC104593779 PE=3 SV=1	[more]
tr\|B9I6V6\|B9I6V6_POPTR	5.8e-124	84.90	Expansin OS=Populus trichocarpa OX=3694 GN=POPTR_013G154700v3 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009664	plant-type cell wall organization

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR036908	RlpA-like_sf
IPR007117	Expansin_CBD
IPR036749	Expansin_CBD_sf
IPR009009	RlpA-like_DPBB
IPR007112	Expansin/allergen_DPBB_dom
IPR002963	Expansin
IPR007118	Expan_Lol_pI

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00168-RA	Carg00168-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 196..210 score: 72.33 coord: 234..248 score: 50.17 coord: 46..64 score: 78.29 coord: 142..158 score: 68.38 coord: 28..43 score: 65.31 coord: 68..86 score: 69.21
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 134..147 score: 78.57 coord: 158..170 score: 82.56 coord: 117..134 score: 78.52 coord: 86..97 score: 58.33 coord: 234..250 score: 54.71 coord: 170..191 score: 75.0 coord: 205..226 score: 74.7 coord: 98..108 score: 83.94 coord: 59..73 score: 86.22
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 64..149 e-value: 4.2E-56 score: 202.4
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 47..159 score: 29.839
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 64..148 e-value: 2.1E-21 score: 75.9
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	G3DSA:2.60.40.760		coord: 159..251 e-value: 1.5E-24 score: 87.8
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	SSF49590	PHL pollen allergen	coord: 156..248
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 160..237 e-value: 1.7E-28 score: 98.4
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 169..248 score: 23.132
IPR036908	RlpA-like domain superfamily	GENE3D	G3DSA:2.40.40.10		coord: 18..155 e-value: 1.1E-44 score: 153.8
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	SSF50685	Barwin-like endoglucanases	coord: 28..177
None	No IPR available	PANTHER	PTHR31867	FAMILY NOT NAMED	coord: 9..251
None	No IPR available	PANTHER	PTHR31867:SF71	EXPANSIN-A2-RELATED	coord: 9..251

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00168	Cla007292	Watermelon (97103) v1	carwmB0667
Carg00168	Csa5G221940	Cucumber (Chinese Long) v2	carcuB0694
Carg00168	Csa6G014540	Cucumber (Chinese Long) v2	carcuB0697
Carg00168	MELO3C020143	Melon (DHL92) v3.5.1	carmeB0656
Carg00168	ClCG11G005690	Watermelon (Charleston Gray)	carwcgB0644
Carg00168	ClCG07G005080	Watermelon (Charleston Gray)	carwcgB0651
Carg00168	CSPI05G11510	Wild cucumber (PI 183967)	carcpiB0706
Carg00168	CSPI06G02130	Wild cucumber (PI 183967)	carcpiB0709
Carg00168	Cucsa.143960	Cucumber (Gy14) v1	carcgyB0745
Carg00168	CmaCh15G001640	Cucurbita maxima (Rimu)	carcmaB0943
Carg00168	CmaCh04G028650	Cucurbita maxima (Rimu)	carcmaB0950
Carg00168	CmaCh04G001070	Cucurbita maxima (Rimu)	carcmaB0949
Carg00168	CmaCh04G010670	Cucurbita maxima (Rimu)	carcmaB0948
Carg00168	CmoCh04G029940	Cucurbita moschata (Rifu)	carcmoB0925
Carg00168	CmoCh15G001780	Cucurbita moschata (Rifu)	carcmoB0918
Carg00168	CmoCh04G011320	Cucurbita moschata (Rifu)	carcmoB0923
Carg00168	CmoCh04G001040	Cucurbita moschata (Rifu)	carcmoB0924
Carg00168	Lsi03G002660	Bottle gourd (USVL1VR-Ls)	carlsiB603
Carg00168	Lsi04G010240	Bottle gourd (USVL1VR-Ls)	carlsiB605
Carg00168	Cp4.1LG01g11970	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00168	Cp4.1LG13g07620	Cucurbita pepo (Zucchini)	carcpeB0934
Carg00168	CsGy5G008760	Cucumber (Gy14) v2	carcgybB0670
Carg00168	CsGy6G002200	Cucumber (Gy14) v2	carcgybB0673
Carg00168	MELO3C020143.2	Melon (DHL92) v3.6.1	carmedB0671
Carg00168	CsaV3_6G002280	Cucumber (Chinese Long) v3	carcucB0711
Carg00168	CsaV3_5G010900	Cucumber (Chinese Long) v3	carcucB0708
Carg00168	Cla97C11G212620	Watermelon (97103) v2	carwmbB0689
Carg00168	Cla97C07G133420	Watermelon (97103) v2	carwmbB0700
Carg00168	Bhi04G001837	Wax gourd	carwgoB0781
Carg00168	Bhi07G000421	Wax gourd	carwgoB0785

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00168	Carg05941	Silver-seed gourd	carcarB025
Carg00168	Carg02156	Silver-seed gourd	carcarB305
Carg00168	Carg24477	Silver-seed gourd	carcarB570

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00168	Silver-seed gourd	carcarB197
Carg00168	Silver-seed gourd	carcarB573
Carg00168	Cucurbita maxima (Rimu)	carcmaB0940
Carg00168	Cucurbita maxima (Rimu)	carcmaB0952
Carg00168	Cucurbita moschata (Rifu)	carcmoB0914
Carg00168	Cucurbita moschata (Rifu)	carcmoB0927
Carg00168	Cucurbita pepo (Zucchini)	carcpeB0939
Carg00168	Cucurbita pepo (Zucchini)	carcpeB0944
Carg00168	Cucurbita pepo (Zucchini)	carcpeB0952