CsGy5G008760 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G008760
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Expansin S1
Location	Chr5 : 6796335 .. 6797746 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCACAAAACAAACCCCACTTTTCTTCACAAACTATTTTCAAATATAAACCCATTCTTATGGCTTTTTCTTACTCACCCTTCTCCTCTCTCTTTCTTCTTCCTTTCTTCTTTGTCTTCACCTTCGCTGACTACGGTGGCTGGCAGAGCGGCCACGCCACCTTTTATGGTGGTGGTGACGCATCTGGCACCATGGGTATGTTTGTTTATATACACACTTTGAAACTATGTTAGACTATAATGGTTGTCACCATGTTCGTCCAGCTTTCTCTAAGTTTTGAATTTTGTTTTTTATTATTATTATGCATTTTGGTTAGTGCTTTGTTGAGTATAATTTAAAGCAGAAATTAAGCACAAATTATTCCCTCCCAAATTTTAAGAAAGTGTCCATTTTCTTCTTCTTCTCCTCCTTTTCCCTCTCTCAATAGCTTAATCCTTTGTCAAAAAAAGAAATTCAACTTCCTAAGGTAAGAAGAAATTTATAATTTTCTTGCTGCCTACCGTTAATAAATAATGTTGTTTGATAGGTAGGAAACAGAGGAAGAGAGAGAAGATAAACTTTTTCAAATTTTAAATTCCTAATATTGGTCAACCATTATCAACTATAGACTCCATAAAAAAAATTTCAACTTCAAGAAAGCTAGTACATGTAAATCACTGTTAGAACTATACTCATTTTTTTACATGCAATAGATAGTAAATTTAAGTTTTGAACATCTTTGAAGTGAGATAGCTAAAATCAATTTTTGTTTGTTGTAGTCAAAATTACTTTTATTTTTTCTAAAAGAATTTATGTTTGGTTAATATTGAAATTCATTTTTAAAAAATTGAAAATCACTTTCAATCGATTTTTAAACAATTAGTTGAACAGTTGTGTTTATTCGGTGATTGATCGATAATTACAAAATTTGTTCCATTTTTTCTTTCGTTTTTTGTCAAGTAACGAATTTAAAAGTTTAAGTTAATTGGTTATGATAAATTTAATCATATTAACCCTTACAAAATTTACAAATAAAAGTTTTCATGTTTTTTTTAGTAATTTTGTATTCTAGAACCATATTTAAAAGAATGATTGTAAAAAATTCAATTGTGTAGGTGGAGCTTGTGGGTATGGGAATTTATACAGCCAAGGGTATGGCACGAACACGGTGGCGCTGAGCACTGCGCTATTTAACAATGGATTAAGTTGTGGTGCTTGCTTCGAAATGACTTGTACAAACGATCCTAAATGGTGCCTTCCGGGAACTATTAGGGTCACTGCCACCAACTTTTGCCCTCCTAACTTTGCTCTCCCTAACAACAATGGTGGATGGTGCAACCCTCCTCTCCAACATTTCGACATGGCTGAGCCTGCCTTCCTTCAAATCGCTCAATACCGAGCCGGTATCGTCCCCGTCTCCTTTCGTAGGTAA

mRNA sequence

AACCCACAAAACAAACCCCACTTTTCTTCACAAACTATTTTCAAATATAAACCCATTCTTATGGCTTTTTCTTACTCACCCTTCTCCTCTCTCTTTCTTCTTCCTTTCTTCTTTGTCTTCACCTTCGCTGACTACGGTGGCTGGCAGAGCGGCCACGCCACCTTTTATGGTGGTGGTGACGCATCTGGCACCATGGGTGGAGCTTGTGGGTATGGGAATTTATACAGCCAAGGGTATGGCACGAACACGGTGGCGCTGAGCACTGCGCTATTTAACAATGGATTAAGTTGTGGTGCTTGCTTCGAAATGACTTGTACAAACGATCCTAAATGGTGCCTTCCGGGAACTATTAGGGTCACTGCCACCAACTTTTGCCCTCCTAACTTTGCTCTCCCTAACAACAATGGTGGATGGTGCAACCCTCCTCTCCAACATTTCGACATGGCTGAGCCTGCCTTCCTTCAAATCGCTCAATACCGAGCCGGTATCGTCCCCGTCTCCTTTCGTAGGTAA

Coding sequence (CDS)

ATGGCTTTTTCTTACTCACCCTTCTCCTCTCTCTTTCTTCTTCCTTTCTTCTTTGTCTTCACCTTCGCTGACTACGGTGGCTGGCAGAGCGGCCACGCCACCTTTTATGGTGGTGGTGACGCATCTGGCACCATGGGTGGAGCTTGTGGGTATGGGAATTTATACAGCCAAGGGTATGGCACGAACACGGTGGCGCTGAGCACTGCGCTATTTAACAATGGATTAAGTTGTGGTGCTTGCTTCGAAATGACTTGTACAAACGATCCTAAATGGTGCCTTCCGGGAACTATTAGGGTCACTGCCACCAACTTTTGCCCTCCTAACTTTGCTCTCCCTAACAACAATGGTGGATGGTGCAACCCTCCTCTCCAACATTTCGACATGGCTGAGCCTGCCTTCCTTCAAATCGCTCAATACCGAGCCGGTATCGTCCCCGTCTCCTTTCGTAGGTAA

Protein sequence

MAFSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR

Homology

[Close]

BLAST of CsGy5G008760 vs. NCBI nr
Match: NP_001267550.1 (expansin-A8-like precursor [Cucumis sativus] >AAB37746.1 expansin S1 precursor [Cucumis sativus] >KGN50732.1 Expansin S1 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 6.9e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MAFSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYG 60
           MAFSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYG
Sbjct: 1   MAFSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYG 60

Query: 61  TNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCN 120
           TNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCN
Sbjct: 61  TNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCN 120

Query: 121 PPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           PPLQHFDMAEPAFLQIAQYRAGIVPVSFRR
Sbjct: 121 PPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 150

[Close]

BLAST of CsGy5G008760 vs. NCBI nr
Match: XP_008456949.1 (PREDICTED: expansin-A8-like [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 3   FSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 62
           FSYSPFSSLFLLP FFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 5   FSYSPFSSLFLLPLFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 64

Query: 63  TVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 122
           TVALST LFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP
Sbjct: 65  TVALSTTLFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 124

Query: 123 LQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           LQHFDMAEPAFLQIAQYRAGIVPVSFRR
Sbjct: 125 LQHFDMAEPAFLQIAQYRAGIVPVSFRR 152

[Close]

BLAST of CsGy5G008760 vs. NCBI nr
Match: XP_022989773.1 (expansin-A8-like [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 2.4e-76
Identity = 144/153 (94.12%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MAFSYSPFSSLFLLPFFFVF---TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ 60
           MAF YSPFS   LLP FF+F   TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MAF-YSPFS---LLPLFFLFLRSTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG 120
           GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG
Sbjct: 61  GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG 120

Query: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR
Sbjct: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 149

[Close]

BLAST of CsGy5G008760 vs. NCBI nr
Match: XP_023518401.1 (expansin-A8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 1.2e-75
Identity = 143/153 (93.46%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 1   MAFSYSPFSSLFLLPFFFVF---TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ 60
           MAF YSPFS   LLP FF+F   T ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MAF-YSPFS---LLPLFFLFLRSTLADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG 120
           GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG
Sbjct: 61  GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG 120

Query: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR
Sbjct: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 149

[Close]

BLAST of CsGy5G008760 vs. NCBI nr
Match: XP_022943120.1 (expansin-A8-like [Cucurbita moschata])

HSP 1 Score: 291.6 bits (745), Expect = 1.5e-75
Identity = 143/153 (93.46%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 1   MAFSYSPFSSLFLLPFFFVF---TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ 60
           MAF YSPFS   LLP FF+F   T ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MAF-YSPFS---LLPLFFLFLRSTVADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG 120
           GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG
Sbjct: 61  GYGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGG 120

Query: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR
Sbjct: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 149

[Close]

BLAST of CsGy5G008760 vs. TAIR10
Match: AT2G40610.1 (expansin A8)

HSP 1 Score: 238.0 bits (606), Expect = 3.7e-63
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 4   SYSPFSSLFLLPFFFV-FTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 63
           SY  +S + ++   F+  T  D GGWQ GHATFYGG DASGTMGGACGYGNLY QGYGTN
Sbjct: 5   SYLKYSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTN 64

Query: 64  TVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 123
           T ALSTALFNNGL+CGAC+EM C +DP+WCL  TI VTATNFCPPN  L N+NGGWCNPP
Sbjct: 65  TAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPP 124

Query: 124 LQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           LQHFD+AEPAFLQIAQYRAGIVPVSFRR
Sbjct: 125 LQHFDLAEPAFLQIAQYRAGIVPVSFRR 152

[Close]

BLAST of CsGy5G008760 vs. TAIR10
Match: AT1G69530.3 (expansin A1)

HSP 1 Score: 231.5 bits (589), Expect = 3.4e-61
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 26  GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTC 85
           GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTALFNNGLSCGACFE+ C
Sbjct: 25  GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRC 84

Query: 86  TNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVP 145
            ND KWCLPG+I VTATNFCPPN ALPNN GGWCNPP QHFD+++P F +IAQYRAGIVP
Sbjct: 85  QNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVP 144

Query: 146 VSFRR 151
           V++RR
Sbjct: 145 VAYRR 149

[Close]

BLAST of CsGy5G008760 vs. TAIR10
Match: AT1G26770.2 (expansin A10)

HSP 1 Score: 231.5 bits (589), Expect = 3.4e-61
Identity = 104/125 (83.20%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 26  GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTC 85
           GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGT+T ALSTALFNNGLSCG+CFE+ C
Sbjct: 34  GGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRC 93

Query: 86  TNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVP 145
            ND KWCLPG+I VTATNFCPPN AL NNNGGWCNPPL+HFD+A+P F +IAQYRAGIVP
Sbjct: 94  ENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVP 153

Query: 146 VSFRR 151
           VS+RR
Sbjct: 154 VSYRR 158

[Close]

BLAST of CsGy5G008760 vs. TAIR10
Match: AT5G05290.1 (expansin A2)

HSP 1 Score: 228.0 bits (580), Expect = 3.8e-60
Identity = 108/149 (72.48%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 3   FSYSPFSSLFLLPF-FFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGT 62
           +S+  F SL  L F  +     D GGW+ GHATFYGG DASGTMGGACGYGNL+SQGYG 
Sbjct: 6   YSHILFLSLCTLNFCLYSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGL 65

Query: 63  NTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNP 122
            T ALSTALFN+G  CGACFE+ C +DP+WC+PG+I V+ATNFCPPNFAL N+NGGWCNP
Sbjct: 66  QTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNP 125

Query: 123 PLQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           PL+HFD+AEPAFLQIAQYRAGIVPV+FRR
Sbjct: 126 PLKHFDLAEPAFLQIAQYRAGIVPVAFRR 154

[Close]

BLAST of CsGy5G008760 vs. TAIR10
Match: AT2G03090.1 (expansin A15)

HSP 1 Score: 222.6 bits (566), Expect = 1.6e-58
Identity = 99/124 (79.84%), Postives = 109/124 (87.90%), Query Frame = 0


Query: 27  GWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTCT 86
           GW + HATFYGG DASGTMGGACGYGNLYSQGYGTNT ALSTALFNNGLSCGACFE+ C 
Sbjct: 29  GWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQ 88

Query: 87  NDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPV 146
           +D  WCLPG I VTATNFCPPN ALPNN GGWCNPPL HFD+++P F +IAQY+AG+VPV
Sbjct: 89  SDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPV 148

Query: 147 SFRR 151
           S+RR
Sbjct: 149 SYRR 152

[Close]

BLAST of CsGy5G008760 vs. Swiss-Prot
Match: sp|O22874|EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.6e-62
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 4   SYSPFSSLFLLPFFFV-FTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 63
           SY  +S + ++   F+  T  D GGWQ GHATFYGG DASGTMGGACGYGNLY QGYGTN
Sbjct: 5   SYLKYSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTN 64

Query: 64  TVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 123
           T ALSTALFNNGL+CGAC+EM C +DP+WCL  TI VTATNFCPPN  L N+NGGWCNPP
Sbjct: 65  TAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPP 124

Query: 124 LQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           LQHFD+AEPAFLQIAQYRAGIVPVSFRR
Sbjct: 125 LQHFDLAEPAFLQIAQYRAGIVPVSFRR 152

[Close]

BLAST of CsGy5G008760 vs. Swiss-Prot
Match: sp|Q9LDR9|EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.2e-60
Identity = 104/125 (83.20%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 26  GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTC 85
           GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGT+T ALSTALFNNGLSCG+CFE+ C
Sbjct: 24  GGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRC 83

Query: 86  TNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVP 145
            ND KWCLPG+I VTATNFCPPN AL NNNGGWCNPPL+HFD+A+P F +IAQYRAGIVP
Sbjct: 84  ENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVP 143

Query: 146 VSFRR 151
           VS+RR
Sbjct: 144 VSYRR 148

[Close]

BLAST of CsGy5G008760 vs. Swiss-Prot
Match: sp|Q9C554|EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.2e-60
Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 26  GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFEMTC 85
           GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTALFNNGLSCGACFE+ C
Sbjct: 25  GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRC 84

Query: 86  TNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVP 145
            ND KWCLPG+I VTATNFCPPN ALPNN GGWCNPP QHFD+++P F +IAQYRAGIVP
Sbjct: 85  QNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVP 144

Query: 146 VSFRR 151
           V++RR
Sbjct: 145 VAYRR 149

[Close]

BLAST of CsGy5G008760 vs. Swiss-Prot
Match: sp|Q40636|EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 5.2e-59
Identity = 107/146 (73.29%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 9   SSLFLLPFFFVF----TFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTV 68
           S+L LL   F F      ADYG WQS HATFYGGGDASGTMGGACGYGNLYS GYGTNT 
Sbjct: 6   SALLLLFSAFCFLARRAAADYGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTA 65

Query: 69  ALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQ 128
           ALST LFN+G +CG+C+E+ C ND +WCLPG++ VTATN CPPN+ALPN++GGWCNPP  
Sbjct: 66  ALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRP 125

Query: 129 HFDMAEPAFLQIAQYRAGIVPVSFRR 151
           HFDMAEPAFLQI  YRAGIVPVS+RR
Sbjct: 126 HFDMAEPAFLQIGVYRAGIVPVSYRR 151

[Close]

BLAST of CsGy5G008760 vs. Swiss-Prot
Match: sp|Q38866|EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana OX=3702 GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 6.8e-59
Identity = 108/149 (72.48%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 3   FSYSPFSSLFLLPF-FFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGT 62
           +S+  F SL  L F  +     D GGW+ GHATFYGG DASGTMGGACGYGNL+SQGYG 
Sbjct: 6   YSHILFLSLCTLNFCLYSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGL 65

Query: 63  NTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNP 122
            T ALSTALFN+G  CGACFE+ C +DP+WC+PG+I V+ATNFCPPNFAL N+NGGWCNP
Sbjct: 66  QTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNP 125

Query: 123 PLQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           PL+HFD+AEPAFLQIAQYRAGIVPV+FRR
Sbjct: 126 PLKHFDLAEPAFLQIAQYRAGIVPVAFRR 154

[Close]

BLAST of CsGy5G008760 vs. TrEMBL
Match: tr|Q39625|Q39625_CUCSA (Expansin OS=Cucumis sativus OX=3659 GN=Cs-EXPA1 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.6e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MAFSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYG 60
           MAFSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYG
Sbjct: 1   MAFSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYG 60

Query: 61  TNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCN 120
           TNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCN
Sbjct: 61  TNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCN 120

Query: 121 PPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           PPLQHFDMAEPAFLQIAQYRAGIVPVSFRR
Sbjct: 121 PPLQHFDMAEPAFLQIAQYRAGIVPVSFRR 150

[Close]

BLAST of CsGy5G008760 vs. TrEMBL
Match: tr|A0A1S3C3Z2|A0A1S3C3Z2_CUCME (Expansin OS=Cucumis melo OX=3656 GN=LOC103496743 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.3e-82
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 3   FSYSPFSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 62
           FSYSPFSSLFLLP FFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 5   FSYSPFSSLFLLPLFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 64

Query: 63  TVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 122
           TVALST LFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP
Sbjct: 65  TVALSTTLFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPP 124

Query: 123 LQHFDMAEPAFLQIAQYRAGIVPVSFRR 151
           LQHFDMAEPAFLQIAQYRAGIVPVSFRR
Sbjct: 125 LQHFDMAEPAFLQIAQYRAGIVPVSFRR 152

[Close]

BLAST of CsGy5G008760 vs. TrEMBL
Match: tr|B9RX15|B9RX15_RICCO (Expansin OS=Ricinus communis OX=3988 GN=RCOM_0815760 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.0e-67
Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 23  ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACFE 82
           ADYGGWQ GHATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTALF+NGLSCGAC+E
Sbjct: 29  ADYGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLSCGACYE 88

Query: 83  MTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAG 142
           M CT+DPKWCLPGTI VTATNFCPPN ALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAG
Sbjct: 89  MKCTDDPKWCLPGTITVTATNFCPPNPALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAG 148

Query: 143 IVPVSFRR 151
           IVPVSFRR
Sbjct: 149 IVPVSFRR 156

[Close]

BLAST of CsGy5G008760 vs. TrEMBL
Match: tr|A0A2C9VLG6|A0A2C9VLG6_MANES (Expansin OS=Manihot esculenta OX=3983 GN=MANES_07G140700 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.1e-67
Identity = 121/140 (86.43%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 11  LFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTAL 70
           LF+L   F  TF DYGGWQ GHATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTAL
Sbjct: 13  LFVLNLCFRGTFGDYGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTAL 72

Query: 71  FNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFDMAE 130
           FN+GLSCGAC+EM C NDPKWCLPGTI VTATNFCPPN+AL N+NGGWCNPPLQHFD+AE
Sbjct: 73  FNSGLSCGACYEMRCDNDPKWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAE 132

Query: 131 PAFLQIAQYRAGIVPVSFRR 151
           PAFLQIAQYRAGIVP+SFRR
Sbjct: 133 PAFLQIAQYRAGIVPISFRR 152

[Close]

BLAST of CsGy5G008760 vs. TrEMBL
Match: tr|A0A2I4FVP5|A0A2I4FVP5_9ROSI (Expansin OS=Juglans regia OX=51240 GN=LOC109002421 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.7e-67
Identity = 121/143 (84.62%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 8   FSSLFLLPFFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALS 67
           F+ LF+L      T ADYGGW+S HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALS
Sbjct: 9   FALLFILQLHLYGTTADYGGWESAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALS 68

Query: 68  TALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGWCNPPLQHFD 127
           TALFNNGL+CGAC+EM C NDP+WCLPGTI VTATNFCPPNFAL N+NGGWCNPPLQHFD
Sbjct: 69  TALFNNGLTCGACYEMRCNNDPRWCLPGTITVTATNFCPPNFALSNDNGGWCNPPLQHFD 128

Query: 128 MAEPAFLQIAQYRAGIVPVSFRR 151
           MAEPAFLQIAQYRAGIVPV+FRR
Sbjct: 129 MAEPAFLQIAQYRAGIVPVAFRR 151

The following BLAST results are available for this feature:

BLAST of CsGy5G008760 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267550.1	6.9e-84	100.00	expansin-A8-like precursor [Cucumis sativus] >AAB37746.1 expansin S1 precursor [...	[more]
XP_008456949.1	1.1e-81	98.65	PREDICTED: expansin-A8-like [Cucumis melo]	[more]
XP_022989773.1	2.4e-76	94.12	expansin-A8-like [Cucurbita maxima]	[more]
XP_023518401.1	1.2e-75	93.46	expansin-A8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943120.1	1.5e-75	93.46	expansin-A8-like [Cucurbita moschata]	[more]

BLAST of CsGy5G008760 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40610.1	3.7e-63	76.35	expansin A8	[more]
AT1G69530.3	3.4e-61	83.20	expansin A1	[more]
AT1G26770.2	3.4e-61	83.20	expansin A10	[more]
AT5G05290.1	3.8e-60	72.48	expansin A2	[more]
AT2G03090.1	1.6e-58	79.84	expansin A15	[more]

BLAST of CsGy5G008760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22874\|EXPA8_ARATH	6.6e-62	76.35	Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1	[more]
sp\|Q9LDR9\|EXP10_ARATH	6.2e-60	83.20	Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1	[more]
sp\|Q9C554\|EXPA1_ARATH	6.2e-60	83.20	Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1	[more]
sp\|Q40636\|EXPA2_ORYSJ	5.2e-59	73.29	Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2	[more]
sp\|Q38866\|EXPA2_ARATH	6.8e-59	72.48	Expansin-A2 OS=Arabidopsis thaliana OX=3702 GN=EXPA2 PE=2 SV=2	[more]

BLAST of CsGy5G008760 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|Q39625\|Q39625_CUCSA	4.6e-84	100.00	Expansin OS=Cucumis sativus OX=3659 GN=Cs-EXPA1 PE=2 SV=1	[more]
tr\|A0A1S3C3Z2\|A0A1S3C3Z2_CUCME	7.3e-82	98.65	Expansin OS=Cucumis melo OX=3656 GN=LOC103496743 PE=3 SV=1	[more]
tr\|B9RX15\|B9RX15_RICCO	3.0e-67	93.75	Expansin OS=Ricinus communis OX=3988 GN=RCOM_0815760 PE=3 SV=1	[more]
tr\|A0A2C9VLG6\|A0A2C9VLG6_MANES	5.1e-67	86.43	Expansin OS=Manihot esculenta OX=3983 GN=MANES_07G140700 PE=3 SV=1	[more]
tr\|A0A2I4FVP5\|A0A2I4FVP5_9ROSI	8.7e-67	84.62	Expansin OS=Juglans regia OX=51240 GN=LOC109002421 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **Biological Process**
Term	Definition
GO:0009664	plant-type cell wall organization

Vocabulary: **INTERPRO**
Term	Definition
IPR036908	RlpA-like_sf
IPR009009	RlpA-like_DPBB
IPR007112	Expansin/allergen_DPBB_dom
IPR007118	Expan_Lol_pI
IPR002963	Expansin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0006949	syncytium formation
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G008760.1	CsGy5G008760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 58..72 score: 86.22 coord: 97..107 score: 83.94 coord: 116..133 score: 78.52 coord: 85..96 score: 58.33 coord: 133..146 score: 78.57
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 45..63 score: 78.29 coord: 67..85 score: 69.21 coord: 27..42 score: 65.31 coord: 141..150 score: 42.94
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 63..148 e-value: 4.2E-56 score: 202.4
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 46..150 score: 27.133
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 63..147 e-value: 6.2E-22 score: 77.6
IPR036908	RlpA-like domain superfamily	GENE3D	G3DSA:2.40.40.10		coord: 19..150 e-value: 1.0E-41 score: 144.3
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	SSF50685	Barwin-like endoglucanases	coord: 15..150
None	No IPR available	PANTHER	PTHR31867	FAMILY NOT NAMED	coord: 11..150
None	No IPR available	PANTHER	PTHR31867:SF71	EXPANSIN-A2-RELATED	coord: 11..150

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G008760	CmoCh04G001040	Cucurbita moschata (Rifu)	cgybcmoB652
CsGy5G008760	Lsi04G010240	Bottle gourd (USVL1VR-Ls)	cgyblsiB338
CsGy5G008760	MELO3C020143.2	Melon (DHL92) v3.6.1	cgybmedB311
CsGy5G008760	CsaV3_5G010900	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G008760	CsaV3_6G002280	Cucumber (Chinese Long) v3	cgybcucB242
CsGy5G008760	Cla97C07G133420	Watermelon (97103) v2	cgybwmbB375
CsGy5G008760	Cla97C11G212620	Watermelon (97103) v2	cgybwmbB347
CsGy5G008760	Carg00168	Silver-seed gourd	carcgybB0670

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy5G008760	CsGy6G002200	Cucumber (Gy14) v2	cgybcgybB145

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G008760	Cucurbita maxima (Rimu)	cgybcmaB673
CsGy5G008760	Cucurbita maxima (Rimu)	cgybcmaB674
CsGy5G008760	Cucurbita moschata (Rifu)	cgybcmoB651
CsGy5G008760	Cucurbita pepo (Zucchini)	cgybcpeB646
CsGy5G008760	Cucurbita pepo (Zucchini)	cgybcpeB647
CsGy5G008760	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G008760	Melon (DHL92) v3.5.1	cgybmeB320
CsGy5G008760	Watermelon (Charleston Gray)	cgybwcgB369
CsGy5G008760	Watermelon (97103) v1	cgybwmB359
CsGy5G008760	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G008760	Silver-seed gourd	carcgybB0898
CsGy5G008760	Wax gourd	cgybwgoB469
CsGy5G008760	Wax gourd	cgybwgoB487