Carg24477 (gene) Silver-seed gourd

Overview
NameCarg24477
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionExpansin
LocationCucurbita_argyrosperma_scaffold_303 : 89130 .. 89985 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTCTTCCTCTTCTTCACCATTTCCCTCTCTTCTTCTCCTTCCTTTCTTCCTCTTCCACATCTTTTTTACCTCTGCCTCCGCCGACTACGGCGGCTGGGAGAGCGGCCATGCCACCTTCTACGGCGGCGGAGACGCCTCCGGTACTATGGGTGGAGCATGTGGGTATGGCAACTTGTACAGCCAAGGGTACGGCACCAACACTGTGGCACTAAGCACAGCGCTATTCAACAACGGCCTTAGCTGCGGCGCATGCTACGAAATGACTTGCACAAATGACCCTAAATGGTGCCTACCCGGCACCATCAAGGTCACTGCCACCAACTTCTGCCCCCCCAATTTCGCCCTCCCCAATAACAACGGCGGCTGGTGCAACCCTCCCCTCCAGCACTTCGACATGGCCGAGCCCGCCTTCCTCCAGATCGCTCAGTACCGCGCCGGAATCGTTCCCGTCTCTTTTCGAAGGTAAATTATATTAGATCTCCACGATGGTATGATATTGTTTATTTTATACTGAAATGTTTTTTATGTGGGCCCTGTTGGACAGAGTGTCGTGTGTGAAGAAAGGGGGAGTGAGGTTCACAATTAACGGTCATTCCTACTTCAACCTTGTCCTGATCACGAACGTGGGCGGGGCGGGGGACGTCCACACGGTGTCCATAAAGGGGTCACGAACGGGATGGCAAGCGATGTCACGAAATTGGGGCCAAAACTGGCAGAGCAACAACTATTTGAATGGGCAAGGGCTCTCCTTTCAAGTCACACTCAGCGATGGCAGCACTCTCACAGCCAACAATCTGGTCCCTTCCAATTGGCAGTTTGGCCAAACCTTCGAAGGCCCCCAATTCTAA

mRNA sequence

ATGGCTTCCTCTTCCTCTTCTTCACCATTTCCCTCTCTTCTTCTCCTTCCTTTCTTCCTCTTCCACATCTTTTTTACCTCTGCCTCCGCCGACTACGGCGGCTGGGAGAGCGGCCATGCCACCTTCTACGGCGGCGGAGACGCCTCCGGTACTATGGGTGGAGCATGTGGGTATGGCAACTTGTACAGCCAAGGGTACGGCACCAACACTGTGGCACTAAGCACAGCGCTATTCAACAACGGCCTTAGCTGCGGCGCATGCTACGAAATGACTTGCACAAATGACCCTAAATGGTGCCTACCCGGCACCATCAAGGTCACTGCCACCAACTTCTGCCCCCCCAATTTCGCCCTCCCCAATAACAACGGCGGCTGGTTCACAATTAACGGTCATTCCTACTTCAACCTTGTCCTGATCACGAACGTGGGCGGGGCGGGGGACGTCCACACGGTGTCCATAAAGGGGTCACGAACGGGATGGCAAGCGATGTCACGAAATTGGGGCCAAAACTGGCAGAGCAACAACTATTTGAATGGGCAAGGGCTCTCCTTTCAAGTCACACTCAGCGATGGCAGCACTCTCACAGCCAACAATCTGGTCCCTTCCAATTGGCAGTTTGGCCAAACCTTCGAAGGCCCCCAATTCTAA

Coding sequence (CDS)

ATGGCTTCCTCTTCCTCTTCTTCACCATTTCCCTCTCTTCTTCTCCTTCCTTTCTTCCTCTTCCACATCTTTTTTACCTCTGCCTCCGCCGACTACGGCGGCTGGGAGAGCGGCCATGCCACCTTCTACGGCGGCGGAGACGCCTCCGGTACTATGGGTGGAGCATGTGGGTATGGCAACTTGTACAGCCAAGGGTACGGCACCAACACTGTGGCACTAAGCACAGCGCTATTCAACAACGGCCTTAGCTGCGGCGCATGCTACGAAATGACTTGCACAAATGACCCTAAATGGTGCCTACCCGGCACCATCAAGGTCACTGCCACCAACTTCTGCCCCCCCAATTTCGCCCTCCCCAATAACAACGGCGGCTGGTTCACAATTAACGGTCATTCCTACTTCAACCTTGTCCTGATCACGAACGTGGGCGGGGCGGGGGACGTCCACACGGTGTCCATAAAGGGGTCACGAACGGGATGGCAAGCGATGTCACGAAATTGGGGCCAAAACTGGCAGAGCAACAACTATTTGAATGGGCAAGGGCTCTCCTTTCAAGTCACACTCAGCGATGGCAGCACTCTCACAGCCAACAATCTGGTCCCTTCCAATTGGCAGTTTGGCCAAACCTTCGAAGGCCCCCAATTCTAA

Protein sequence

MASSSSSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGWFTINGHSYFNLVLITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTFEGPQF
Homology
[Close]
BLAST of Carg24477 vs. NCBI nr
Match: XP_022941862.1 (expansin-A2 [Cucurbita moschata])

HSP 1 Score: 427.2 bits (1097), Expect = 3.4e-116
Identity = 214/257 (83.27%), Postives = 214/257 (83.27%), Query Frame = 0 

Query: 1   MASSSSSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGN 60
           MASSSSSSPFPSLLLLPFFLFHIFF SASADYGGWESGHATFYGGGDASGTMGGACGYGN
Sbjct: 1   MASSSSSSPFPSLLLLPFFLFHIFFPSASADYGGWESGHATFYGGGDASGTMGGACGYGN 60

Query: 61  LYSQGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPN 120
           LYSQGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPN
Sbjct: 61  LYSQGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPN 120

Query: 121 NNGGW------------------------------------------FTINGHSYFNLVL 180
           NNGGW                                          FTINGHSYFNLVL
Sbjct: 121 NNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVSCVKKGGVRFTINGHSYFNLVL 180

Query: 181 ITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANN 216
           ITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANN
Sbjct: 181 ITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANN 240

[Close]
BLAST of Carg24477 vs. NCBI nr
Match: XP_023532338.1 (expansin-A4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.5 bits (1064), Expect = 2.3e-112
Identity = 206/253 (81.42%), Postives = 209/253 (82.61%), Query Frame = 0 

Query: 5   SSSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQ 64
           +SSSPFPSLLLLPFFLFH+ F SASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 2   ASSSPFPSLLLLPFFLFHLSFPSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQ 61

Query: 65  GYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGG 124
           GYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGG
Sbjct: 62  GYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGG 121

Query: 125 W------------------------------------------FTINGHSYFNLVLITNV 184
           W                                          FTINGHSYFNLVLITNV
Sbjct: 122 WCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVSCVKKGGVRFTINGHSYFNLVLITNV 181

Query: 185 GGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPS 216
           GGAGDVH+VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPS
Sbjct: 182 GGAGDVHSVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPS 241

[Close]
BLAST of Carg24477 vs. NCBI nr
Match: XP_022996397.1 (expansin-A4 [Cucurbita maxima])

HSP 1 Score: 414.1 bits (1063), Expect = 3.0e-112
Identity = 206/254 (81.10%), Postives = 209/254 (82.28%), Query Frame = 0 

Query: 4   SSSSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYS 63
           +SSSSPFPSLLLLPFFLFH+ F SASADYGGWESGHATFYGGGDASGTMGGACGYGNLYS
Sbjct: 2   ASSSSPFPSLLLLPFFLFHLSFPSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYS 61

Query: 64  QGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNG 123
           QGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNG
Sbjct: 62  QGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNG 121

Query: 124 GW------------------------------------------FTINGHSYFNLVLITN 183
           GW                                          FTINGHSYFNLVLITN
Sbjct: 122 GWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVSCMKKGGVRFTINGHSYFNLVLITN 181

Query: 184 VGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVP 216
           VGGAGDVH+VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDG TLTANNLVP
Sbjct: 182 VGGAGDVHSVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTANNLVP 241

[Close]
BLAST of Carg24477 vs. NCBI nr
Match: NP_001267550.1 (expansin-A8-like precursor [Cucumis sativus] >AAB37746.1 expansin S1 precursor [Cucumis sativus] >KGN50732.1 Expansin S1 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 2.3e-101
Identity = 190/252 (75.40%), Postives = 196/252 (77.78%), Query Frame = 0 

Query: 6   SSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQG 65
           S SPF SL LLPFF    F     ADYGGW+SGHATFYGGGDASGTMGGACGYGNLYSQG
Sbjct: 4   SYSPFSSLFLLPFFFVFTF-----ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQG 63

Query: 66  YGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW 125
           YGTNTVALSTALFNNGLSCGAC+EMTCTNDPKWCLPGTI+VTATNFCPPNFALPNNNGGW
Sbjct: 64  YGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGW 123

Query: 126 ------------------------------------------FTINGHSYFNLVLITNVG 185
                                                     FTINGHSYFNLVLITNVG
Sbjct: 124 CNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVG 183

Query: 186 GAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSN 216
           GAGDVH+VSIKGSRTGWQ+MSRNWGQNWQSNNYLNGQGLSFQVTLSDG TLTA NLVPSN
Sbjct: 184 GAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSN 243

[Close]
BLAST of Carg24477 vs. NCBI nr
Match: XP_008456949.1 (PREDICTED: expansin-A8-like [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 3.1e-101
Identity = 191/257 (74.32%), Postives = 196/257 (76.26%), Query Frame = 0 

Query: 1   MASSSSSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGN 60
           MA   S SPF SL LLP     +FF    ADYGGW+SGHATFYGGGDASGTMGGACGYGN
Sbjct: 1   MAPPFSYSPFSSLFLLP-----LFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGN 60

Query: 61  LYSQGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPN 120
           LYSQGYGTNTVALST LFNNGLSCGAC+EMTCTNDPKWCLPGTI+VTATNFCPPNFALPN
Sbjct: 61  LYSQGYGTNTVALSTTLFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPN 120

Query: 121 NNGGW------------------------------------------FTINGHSYFNLVL 180
           NNGGW                                          FTINGHSYFNLVL
Sbjct: 121 NNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVL 180

Query: 181 ITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANN 216
           ITNVGGAGDVH VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDG TLTA N
Sbjct: 181 ITNVGGAGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGHTLTAYN 240

[Close]
BLAST of Carg24477 vs. TAIR10
Match: AT2G40610.1 (expansin A8)

HSP 1 Score: 301.6 bits (771), Expect = 3.9e-82
Identity = 150/236 (63.56%), Postives = 165/236 (69.92%), Query Frame = 0 

Query: 23  IFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGL 82
           +F      D GGW+ GHATFYGG DASGTMGGACGYGNLY QGYGTNT ALSTALFNNGL
Sbjct: 18  LFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGL 77

Query: 83  SCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW----------------- 142
           +CGACYEM C +DP+WCL  TI VTATNFCPPN  L N+NGGW                 
Sbjct: 78  TCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQ 137

Query: 143 -------------------------FTINGHSYFNLVLITNVGGAGDVHTVSIKGSRT-G 202
                                    FTINGHSYFNLVLI+NVGGAGDVH VSIKGS+T  
Sbjct: 138 IAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQS 197

Query: 203 WQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTFEGPQF 216
           WQAMSRNWGQNWQSN+Y+N Q LSFQVT SDG TL +N++ PSNWQFGQT++G QF
Sbjct: 198 WQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253

[Close]
BLAST of Carg24477 vs. TAIR10
Match: AT1G69530.3 (expansin A1)

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-81
Identity = 147/220 (66.82%), Postives = 159/220 (72.27%), Query Frame = 0 

Query: 33  GGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACYEMTC 92
           GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTALFNNGLSCGAC+E+ C
Sbjct: 25  GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRC 84

Query: 93  TNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW--------------------------- 152
            ND KWCLPG+I VTATNFCPPN ALPNN GGW                           
Sbjct: 85  QNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVP 144

Query: 153 ---------------FTINGHSYFNLVLITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQN 211
                          FTINGHSYFNLVLITNVGGAGDVH+  +KGSRTGWQAMSRNWGQN
Sbjct: 145 VAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQN 204

[Close]
BLAST of Carg24477 vs. TAIR10
Match: AT1G26770.2 (expansin A10)

HSP 1 Score: 297.4 bits (760), Expect = 7.3e-81
Identity = 150/242 (61.98%), Postives = 167/242 (69.01%), Query Frame = 0 

Query: 16  LPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALST 75
           L   +  +  +S S   GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGT+T ALST
Sbjct: 17  LVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALST 76

Query: 76  ALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW---------- 135
           ALFNNGLSCG+C+E+ C ND KWCLPG+I VTATNFCPPN AL NNNGGW          
Sbjct: 77  ALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDL 136

Query: 136 --------------------------------FTINGHSYFNLVLITNVGGAGDVHTVSI 195
                                           FTINGHSYFNLVLITNVGGAGDVH+ +I
Sbjct: 137 AQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAI 196

Query: 196 KGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTFEGP 216
           KGSRT WQAMSRNWGQNWQSN+YLNGQ LSF+VT SDG T+ + N  P+ W +GQTF G 
Sbjct: 197 KGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGG 256

[Close]
BLAST of Carg24477 vs. TAIR10
Match: AT2G03090.1 (expansin A15)

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-80
Identity = 150/245 (61.22%), Postives = 165/245 (67.35%), Query Frame = 0 

Query: 13  LLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVA 72
           LL +  F F     S      GW + HATFYGG DASGTMGGACGYGNLYSQGYGTNT A
Sbjct: 8   LLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAA 67

Query: 73  LSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW------- 132
           LSTALFNNGLSCGAC+E+ C +D  WCLPG I VTATNFCPPN ALPNN GGW       
Sbjct: 68  LSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHH 127

Query: 133 -----------------------------------FTINGHSYFNLVLITNVGGAGDVHT 192
                                              FTINGHSYFNLVL+TNVGGAGDVH+
Sbjct: 128 FDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHS 187

Query: 193 VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTF 216
           V++KGSRT WQ MSRNWGQNWQSNN LNGQ LSF+VT SDG T+ +NN+ P++W FGQTF
Sbjct: 188 VAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTF 247

[Close]
BLAST of Carg24477 vs. TAIR10
Match: AT5G05290.1 (expansin A2)

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-76
Identity = 147/249 (59.04%), Postives = 169/249 (67.87%), Query Frame = 0 

Query: 10  FPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 69
           F SL  L F L+ I     S D GGWE GHATFYGG DASGTMGGACGYGNL+SQGYG  
Sbjct: 11  FLSLCTLNFCLYSI----NSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQ 70

Query: 70  TVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW---- 129
           T ALSTALFN+G  CGAC+E+ C +DP+WC+PG+I V+ATNFCPPNFAL N+NGGW    
Sbjct: 71  TAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPP 130

Query: 130 --------------------------------------FTINGHSYFNLVLITNVGGAGD 189
                                                 FTING+ YF+LVLITNVGGAGD
Sbjct: 131 LKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGD 190

Query: 190 VHTVSIKGSRTG-WQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQF 216
           +  VS+KGS+T  WQ+MSRNWGQNWQSN YL GQ LSFQVT SDG T+ + ++VP +WQF
Sbjct: 191 IRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQF 250

[Close]
BLAST of Carg24477 vs. Swiss-Prot
Match: sp|Q40636|EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 308.1 bits (788), Expect = 7.5e-83
Identity = 156/257 (60.70%), Postives = 178/257 (69.26%), Query Frame = 0 

Query: 1   MASSSSSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGN 60
           MAS SS+      LLL F  F      A+ADYG W+S HATFYGGGDASGTMGGACGYGN
Sbjct: 1   MASRSSA------LLLLFSAFCFLARRAAADYGSWQSAHATFYGGGDASGTMGGACGYGN 60

Query: 61  LYSQGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPN 120
           LYS GYGTNT ALST LFN+G +CG+CYE+ C ND +WCLPG++ VTATN CPPN+ALPN
Sbjct: 61  LYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPN 120

Query: 121 NNGGW------------------------------------------FTINGHSYFNLVL 180
           ++GGW                                          FTINGHSYFNLVL
Sbjct: 121 DDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVL 180

Query: 181 ITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANN 216
           +TNV G GDV +VSIKGS TGWQ MSRNWGQNWQSN+YL+GQ LSFQV +SDG T+T+NN
Sbjct: 181 VTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNN 240

[Close]
BLAST of Carg24477 vs. Swiss-Prot
Match: sp|Q9C554|EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-81
Identity = 149/224 (66.52%), Postives = 161/224 (71.88%), Query Frame = 0 

Query: 33  GGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGLSCGACYEMTC 92
           GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGTNT ALSTALFNNGLSCGAC+E+ C
Sbjct: 25  GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRC 84

Query: 93  TNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW--------------------------- 152
            ND KWCLPG+I VTATNFCPPN ALPNN GGW                           
Sbjct: 85  QNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVP 144

Query: 153 ---------------FTINGHSYFNLVLITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQN 212
                          FTINGHSYFNLVLITNVGGAGDVH+  +KGSRTGWQAMSRNWGQN
Sbjct: 145 VAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQN 204

Query: 213 WQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTFEGPQ 215
           WQSN+YLNGQ LSF+VT SDG T+ +NN+  + W FGQTF G Q
Sbjct: 205 WQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQ 248

[Close]
BLAST of Carg24477 vs. Swiss-Prot
Match: sp|O22874|EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.0e-81
Identity = 150/236 (63.56%), Postives = 165/236 (69.92%), Query Frame = 0 

Query: 23  IFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALSTALFNNGL 82
           +F      D GGW+ GHATFYGG DASGTMGGACGYGNLY QGYGTNT ALSTALFNNGL
Sbjct: 18  LFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGL 77

Query: 83  SCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW----------------- 142
           +CGACYEM C +DP+WCL  TI VTATNFCPPN  L N+NGGW                 
Sbjct: 78  TCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQ 137

Query: 143 -------------------------FTINGHSYFNLVLITNVGGAGDVHTVSIKGSRT-G 202
                                    FTINGHSYFNLVLI+NVGGAGDVH VSIKGS+T  
Sbjct: 138 IAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQS 197

Query: 203 WQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTFEGPQF 216
           WQAMSRNWGQNWQSN+Y+N Q LSFQVT SDG TL +N++ PSNWQFGQT++G QF
Sbjct: 198 WQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253

[Close]
BLAST of Carg24477 vs. Swiss-Prot
Match: sp|Q9LDR9|EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-79
Identity = 150/242 (61.98%), Postives = 167/242 (69.01%), Query Frame = 0 

Query: 16  LPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVALST 75
           L   +  +  +S S   GGW + HATFYGGGDASGTMGGACGYGNLYSQGYGT+T ALST
Sbjct: 7   LVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALST 66

Query: 76  ALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW---------- 135
           ALFNNGLSCG+C+E+ C ND KWCLPG+I VTATNFCPPN AL NNNGGW          
Sbjct: 67  ALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDL 126

Query: 136 --------------------------------FTINGHSYFNLVLITNVGGAGDVHTVSI 195
                                           FTINGHSYFNLVLITNVGGAGDVH+ +I
Sbjct: 127 AQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAI 186

Query: 196 KGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTFEGP 216
           KGSRT WQAMSRNWGQNWQSN+YLNGQ LSF+VT SDG T+ + N  P+ W +GQTF G 
Sbjct: 187 KGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGG 246

[Close]
BLAST of Carg24477 vs. Swiss-Prot
Match: sp|O80622|EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 2.9e-79
Identity = 150/245 (61.22%), Postives = 165/245 (67.35%), Query Frame = 0 

Query: 13  LLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTVA 72
           LL +  F F     S      GW + HATFYGG DASGTMGGACGYGNLYSQGYGTNT A
Sbjct: 8   LLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAA 67

Query: 73  LSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW------- 132
           LSTALFNNGLSCGAC+E+ C +D  WCLPG I VTATNFCPPN ALPNN GGW       
Sbjct: 68  LSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHH 127

Query: 133 -----------------------------------FTINGHSYFNLVLITNVGGAGDVHT 192
                                              FTINGHSYFNLVL+TNVGGAGDVH+
Sbjct: 128 FDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHS 187

Query: 193 VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQTF 216
           V++KGSRT WQ MSRNWGQNWQSNN LNGQ LSF+VT SDG T+ +NN+ P++W FGQTF
Sbjct: 188 VAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTF 247

[Close]
BLAST of Carg24477 vs. TrEMBL
Match: tr|Q39625|Q39625_CUCSA (Expansin OS=Cucumis sativus OX=3659 GN=Cs-EXPA1 PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.6e-101
Identity = 190/252 (75.40%), Postives = 196/252 (77.78%), Query Frame = 0 

Query: 6   SSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQG 65
           S SPF SL LLPFF    F     ADYGGW+SGHATFYGGGDASGTMGGACGYGNLYSQG
Sbjct: 4   SYSPFSSLFLLPFFFVFTF-----ADYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQG 63

Query: 66  YGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW 125
           YGTNTVALSTALFNNGLSCGAC+EMTCTNDPKWCLPGTI+VTATNFCPPNFALPNNNGGW
Sbjct: 64  YGTNTVALSTALFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPNNNGGW 123

Query: 126 ------------------------------------------FTINGHSYFNLVLITNVG 185
                                                     FTINGHSYFNLVLITNVG
Sbjct: 124 CNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVLITNVG 183

Query: 186 GAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSN 216
           GAGDVH+VSIKGSRTGWQ+MSRNWGQNWQSNNYLNGQGLSFQVTLSDG TLTA NLVPSN
Sbjct: 184 GAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLVPSN 243

[Close]
BLAST of Carg24477 vs. TrEMBL
Match: tr|A0A1S3C3Z2|A0A1S3C3Z2_CUCME (Expansin OS=Cucumis melo OX=3656 GN=LOC103496743 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.0e-101
Identity = 191/257 (74.32%), Postives = 196/257 (76.26%), Query Frame = 0 

Query: 1   MASSSSSSPFPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGN 60
           MA   S SPF SL LLP     +FF    ADYGGW+SGHATFYGGGDASGTMGGACGYGN
Sbjct: 1   MAPPFSYSPFSSLFLLP-----LFFVFTFADYGGWQSGHATFYGGGDASGTMGGACGYGN 60

Query: 61  LYSQGYGTNTVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPN 120
           LYSQGYGTNTVALST LFNNGLSCGAC+EMTCTNDPKWCLPGTI+VTATNFCPPNFALPN
Sbjct: 61  LYSQGYGTNTVALSTTLFNNGLSCGACFEMTCTNDPKWCLPGTIRVTATNFCPPNFALPN 120

Query: 121 NNGGW------------------------------------------FTINGHSYFNLVL 180
           NNGGW                                          FTINGHSYFNLVL
Sbjct: 121 NNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGVRFTINGHSYFNLVL 180

Query: 181 ITNVGGAGDVHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANN 216
           ITNVGGAGDVH VSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDG TLTA N
Sbjct: 181 ITNVGGAGDVHAVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGHTLTAYN 240

[Close]
BLAST of Carg24477 vs. TrEMBL
Match: tr|A0A1S3U7K2|A0A1S3U7K2_VIGRR (Expansin OS=Vigna radiata var. radiata OX=3916 GN=LOC106762507 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.6e-90
Identity = 169/247 (68.42%), Postives = 183/247 (74.09%), Query Frame = 0 

Query: 12  SLLLLPFFLFHIFFTSASADY-GGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 71
           S + L FFL ++F      DY GGW+ GHATFYGGGDASGTMGGACGYGNLYSQGYGTNT
Sbjct: 7   STISLLFFLLNLFLQGTFGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 66

Query: 72  VALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW----- 131
            ALSTALFNNGLSCG+CYEM C +DP+WCLPG+I VTATNFCPPNFAL NNNGGW     
Sbjct: 67  AALSTALFNNGLSCGSCYEMKCDSDPRWCLPGSIIVTATNFCPPNFALANNNGGWCNPPL 126

Query: 132 -------------------------------------FTINGHSYFNLVLITNVGGAGDV 191
                                                FTINGHSYFNLVLITNVGGAGDV
Sbjct: 127 QHFDLAEPAFLQIAQYKAGIVPVSFRRVSCVKKGGIRFTINGHSYFNLVLITNVGGAGDV 186

Query: 192 HTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQ 216
           H+VSIKGS+TGWQ MSRNWGQNWQSN+YLNGQ LSFQVT SDG TLT+NN+VP+NWQFGQ
Sbjct: 187 HSVSIKGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTLTSNNIVPANWQFGQ 246

[Close]
BLAST of Carg24477 vs. TrEMBL
Match: tr|A0A0L9UCL1|A0A0L9UCL1_PHAAN (Expansin OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g086300 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.6e-90
Identity = 169/247 (68.42%), Postives = 183/247 (74.09%), Query Frame = 0 

Query: 12  SLLLLPFFLFHIFFTSASADY-GGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 71
           S + L FFL ++F      DY GGW+ GHATFYGGGDASGTMGGACGYGNLYSQGYGTNT
Sbjct: 7   STISLLFFLLNLFLQGTFGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 66

Query: 72  VALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW----- 131
            ALSTALFNNGLSCG+CYEM C +DP+WCLPG+I VTATNFCPPNFAL NNNGGW     
Sbjct: 67  AALSTALFNNGLSCGSCYEMKCDSDPRWCLPGSIIVTATNFCPPNFALANNNGGWCNPPL 126

Query: 132 -------------------------------------FTINGHSYFNLVLITNVGGAGDV 191
                                                FTINGHSYFNLVLITNVGGAGDV
Sbjct: 127 QHFDLAEPAFLQIAQYKAGIVPVSFRRVSCVKKGGIRFTINGHSYFNLVLITNVGGAGDV 186

Query: 192 HTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFGQ 216
           H+VSIKGS+TGWQ MSRNWGQNWQSN+YLNGQ LSFQVT SDG TLT+NN+VP+NWQFGQ
Sbjct: 187 HSVSIKGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTLTSNNIVPANWQFGQ 246

[Close]
BLAST of Carg24477 vs. TrEMBL
Match: tr|A0A2R6P6J8|A0A2R6P6J8_ACTCH (Expansin OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31871 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.6e-90
Identity = 169/248 (68.15%), Postives = 180/248 (72.58%), Query Frame = 0 

Query: 10  FPSLLLLPFFLFHIFFTSASADYGGWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTN 69
           F +L+L  F   H  F  ++ADYGGWE  HATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 8   FTTLILFVFLNLH--FHGSNADYGGWEGAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 67

Query: 70  TVALSTALFNNGLSCGACYEMTCTNDPKWCLPGTIKVTATNFCPPNFALPNNNGGW---- 129
           T ALSTALFNNGLSCGACYEM C NDPKWCLPGTI VTATNFCPPNFALPNN+GGW    
Sbjct: 68  TAALSTALFNNGLSCGACYEMQCNNDPKWCLPGTITVTATNFCPPNFALPNNDGGWCNPP 127

Query: 130 --------------------------------------FTINGHSYFNLVLITNVGGAGD 189
                                                 FTINGHSYFNLVLITNV GAGD
Sbjct: 128 LQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCAKKGGIRFTINGHSYFNLVLITNVAGAGD 187

Query: 190 VHTVSIKGSRTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGSTLTANNLVPSNWQFG 216
           +H VSIKGS+TGWQAMSRNWGQNWQSN+YLNGQ LSFQVT SD  T+T+ N+ P NWQFG
Sbjct: 188 IHAVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDSRTITSYNVAPGNWQFG 247

The following BLAST results are available for this feature:
BLAST of Carg24477 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941862.13.4e-11683.27expansin-A2 [Cucurbita moschata][more]
XP_023532338.12.3e-11281.42expansin-A4 [Cucurbita pepo subsp. pepo][more]
XP_022996397.13.0e-11281.10expansin-A4 [Cucurbita maxima][more]
NP_001267550.12.3e-10175.40expansin-A8-like precursor [Cucumis sativus] >AAB37746.1 expansin S1 precursor [... [more]
XP_008456949.13.1e-10174.32PREDICTED: expansin-A8-like [Cucumis melo][more]
BLAST of Carg24477 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40610.13.9e-8263.56expansin A8[more]
AT1G69530.31.5e-8166.82expansin A1[more]
AT1G26770.27.3e-8161.98expansin A10[more]
AT2G03090.11.6e-8061.22expansin A15[more]
AT5G05290.13.2e-7659.04expansin A2[more]
BLAST of Carg24477 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q40636|EXPA2_ORYSJ7.5e-8360.70Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2[more]
sp|Q9C554|EXPA1_ARATH1.8e-8166.52Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1[more]
sp|O22874|EXPA8_ARATH7.0e-8163.56Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1[more]
sp|Q9LDR9|EXP10_ARATH1.3e-7961.98Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1[more]
sp|O80622|EXP15_ARATH2.9e-7961.22Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2[more]
BLAST of Carg24477 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q39625|Q39625_CUCSA1.6e-10175.40Expansin OS=Cucumis sativus OX=3659 GN=Cs-EXPA1 PE=2 SV=1[more]
tr|A0A1S3C3Z2|A0A1S3C3Z2_CUCME2.0e-10174.32Expansin OS=Cucumis melo OX=3656 GN=LOC103496743 PE=3 SV=1[more]
tr|A0A1S3U7K2|A0A1S3U7K2_VIGRR3.6e-9068.42Expansin OS=Vigna radiata var. radiata OX=3916 GN=LOC106762507 PE=3 SV=1[more]
tr|A0A0L9UCL1|A0A0L9UCL1_PHAAN3.6e-9068.42Expansin OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g086300 PE=3 SV=1[more]
tr|A0A2R6P6J8|A0A2R6P6J8_ACTCH3.6e-9068.15Expansin OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31871 PE=3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0009664plant-type cell wall organization
Vocabulary: INTERPRO
TermDefinition
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf
IPR007117Expansin_CBD
IPR009009RlpA-like_DPBB
IPR007112Expansin/allergen_DPBB_dom
IPR007118Expan_Lol_pI
IPR002963Expansin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24477-RACarg24477-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 65..79
score: 86.22
coord: 104..114
score: 83.64
coord: 92..103
score: 58.33
coord: 202..215
score: 17.58
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 52..70
score: 78.29
coord: 34..49
score: 64.38
coord: 74..92
score: 68.16
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 70..152
e-value: 7.1E-25
score: 98.6
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 53..136
score: 20.003
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 70..119
e-value: 1.4E-11
score: 44.5
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 126..201
e-value: 2.1E-26
score: 91.7
IPR007117Expansin, cellulose-binding-like domainPROSITEPS50843EXPANSIN_CBDcoord: 133..212
score: 22.431
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3DG3DSA:2.60.40.760coord: 129..215
e-value: 7.2E-24
score: 85.6
IPR036749Expansin, cellulose-binding-like domain superfamilySUPERFAMILYSSF49590PHL pollen allergencoord: 125..212
IPR036908RlpA-like domain superfamilyGENE3DG3DSA:2.40.40.10coord: 32..128
e-value: 9.5E-14
score: 53.5
IPR036908RlpA-like domain superfamilySUPERFAMILYSSF50685Barwin-like endoglucanasescoord: 34..141
NoneNo IPR availablePANTHERPTHR31867:SF71EXPANSIN-A2-RELATEDcoord: 126..215
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 13..125
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 126..215
NoneNo IPR availablePANTHERPTHR31867:SF71EXPANSIN-A2-RELATEDcoord: 13..125