CSPI07G21930 (gene) Wild cucumber (PI 183967)

NameCSPI07G21930
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha
LocationChr7 : 18649882 .. 18651987 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCGTGTACGATTCAACCTCCCCTCACTTCACCGCAGCCAGATTCCGACAAGCTTCCGACGTCTACGGCATTATCGCTCTGTTCTTCTTCCAATCTACTCGCCATTAAGTTTCTGTTTTGGGATTCAGTAAGCTCATTCATTTCTGAATTTTCTTTAAAATTCGATACAAATTACCGAAAGATAGTTTCTTTTTGCTTCGAATTTGTTCCAACAAATTGAATTTCTTCTCTCTCTTGGACGATTTGGGCATTCCGTTTCTTTTCTGTACTAAGAATGTGCTATATGAGCTTGATCAGAAGTAGAATATCCACGAGTCCTGAAGGGTGATTTGGTTTTCACTTTTCTTCGAGCTGATTAGGTTATATGGTTATTTTCTGTGTTTGTTCTTGTTCTGTGCTTCCGTACTTCCGTTCTGAAGTTTAATGTTTTTACATTACATTGCAAGCACCTGGACTATTATCACAGAACAATTGTTTGACTCTAGTCAAATTTGATGCTGCTTCCAGTCTAATTTCAGGATACGCTTGAATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAAATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAACTACTGCTTATTAGTTTCTATCTTGAAATGAAACCATAGTTGTTACTGTATTTTCCTCATGGTCATAGAACAGCTATCCTTCAATCAATTTATCATAACTTGCTTGCTTATTGCTCGATGGCTTATTAGTTAGGCAATTTCTTATCAATATGATTTTGAGTATTTTGTAATTTCTTAGTGCAGCCAGAAAATTACGTGTCTTTTCTCCTAGTGCACTGTGCAGTGGTGATTTAGGACTCCCTGAGCCATGAACAAGAATGAAGGAAACTAGAAAACGATAGAAGACAGCTTAATCTAGAAACAAGAAATAAGTAATGTACTATCAAGTTTTAACAGTTTTGGTATCTTTTCAAGGGGTTGTTCTTTGATTGGAAAAAAATGCTTTTCTATATAGTATTCTCTCTATCGTTCATAAAGAGGAGGTTAGGGTGTAGTTTGTTGGATTGTTTGCCTAAAAAAAAGGTATACATTAGGCAAACAAAACAAAGTAGGTATGTATAATGAGTAAAGAAATGAAAAAGAATGAGTAAAGAATCACATCCTTACCATTCTATTTGAAACTTGTGAGTCTTGTAGACTTTTACATGTCTTCTCCTTCACTTACTATCATAAAGATTGTTCTAAGATAAGACAGCTCGTGCAGATTTATAGTTGTTAGAATACCTTGAATGTGTTTTCTGGTGTTTTAGAATGATCCTACACGGGTTTTGCTAGGATTAAAGGAGTGCACTATACATAAACTCTCTAGCTCTAGAGGCACCACTGGAATCTTAAGTTTAACATTTTCTCTTTAATAACAAAAACTGCTCATCCCCTGCCCATGCACGTAGCTAACTCATTGTCTCTATTTGGATTCTCTACGGTTTTAGTTTTCTTCTCATCTCAACAGTTATTATTACGAAAAATGATGGAACCAAAACAAAGTTCTTTTTAAATTTGACTAATTGATAGAATGAACTTTTGTTTCCAAGATTCTTAATTTGTAAAGTAATAATGTTCTTATAAATCATTATTTTGATGTCTGCTTTGTGGTTCATATTCTACTCAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGATGGTATAAGAAGGTGAACTTCAAAACATGTATGATTATGTAAATAGTTACTTGTGTAAATAATATAACATGTTGTATTCTTGTTTGTTTCCTTTGCTCATCTTCGTTTTGTGAAGAGCAGAGAAAAGCTTACGAGCATAAACATGTGCAAATTTATGAAAGTCAATGGGCTTCGATTTTTTTTTTTTTTT

mRNA sequence

ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAAATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

Coding sequence (CDS)

ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAAATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA
BLAST of CSPI07G21930 vs. Swiss-Prot
Match: PFPA2_ARATH (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana GN=PFP-ALPHA2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-07
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + +   +EDQDY+ KI KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  ST 70
           S+
Sbjct: 609 SS 610

BLAST of CSPI07G21930 vs. Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum GN=PFP-ALPHA PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 5.2e-07
Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL +++S+  ILS +SS
Sbjct: 549 DAKAVSLCVEDQDYIGRIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVTDILSVISS 608

Query: 68  STKL 72
            + +
Sbjct: 609 PSSV 612

BLAST of CSPI07G21930 vs. Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.8e-07
Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + I   +EDQDY+ +I KLQ YLD+V+ IV   CSQEVL+ AL  ++S+  +L +MSS
Sbjct: 549 DAKPITLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLLTMSS 608

Query: 68  ST 70
           ++
Sbjct: 609 TS 610

BLAST of CSPI07G21930 vs. Swiss-Prot
Match: PFPA1_ARATH (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana GN=PFP-ALPHA1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.8e-07
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

BLAST of CSPI07G21930 vs. TrEMBL
Match: A0A0A0KAL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447890 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-28
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLE+ALDSISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 ILSSMSSSTKLHSSL 76
          ILSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

BLAST of CSPI07G21930 vs. TrEMBL
Match: V4S648_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013226mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.5e-08
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1

Query: 8  DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
          D++  G   ED++Y+ KI + Q YLD V+KI    CSQEVL+VAL+S++SL+ IL+ MSS
Sbjct: 19 DVKSAGLCTEDEEYITKIKEFQAYLDLVQKIAKPGCSQEVLKVALNSMASLVKILNCMSS 78

Query: 68 STKLHSSL 76
          + KL +SL
Sbjct: 79 TLKLRASL 86

BLAST of CSPI07G21930 vs. TrEMBL
Match: F6I1G6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0045g01120 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.0e-07
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1

Query: 12  IGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSSSTKL 71
           I  +++DQDY  KI +LQ YLD+V +IV   CS EVL+VAL+SISSL+  LS +SSS K 
Sbjct: 39  IELLVQDQDYTGKIKELQAYLDKVNEIVKPGCSPEVLKVALNSISSLVNFLSHISSSPKP 98

Query: 72  HSSL 76
            +SL
Sbjct: 99  LASL 102

BLAST of CSPI07G21930 vs. TrEMBL
Match: B9HDG2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02540g PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.8e-06
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1

Query: 13  GTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSSSTKLH 72
           GT+ EDQ+Y+++I +L  YLD VK +V   CS EVL++AL+S+S+L   L+ +SS T+ H
Sbjct: 68  GTLTEDQEYIKEIKELHAYLDIVKTMVRPGCSPEVLKIALNSMSTLFNTLTFVSSVTRPH 127

Query: 73  SSL 76
           +SL
Sbjct: 128 ASL 130

BLAST of CSPI07G21930 vs. TrEMBL
Match: A0A067KKJ2_JATCU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Jatropha curcas GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.9e-06
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQEVL+ AL  ++S+  +LS+MSS
Sbjct: 549 DARPVTLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQEVLKAALSVMASVTDVLSAMSS 608

Query: 68  ST 70
           S+
Sbjct: 609 SS 610

BLAST of CSPI07G21930 vs. TAIR10
Match: AT1G76550.1 (AT1G76550.1 Phosphofructokinase family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-08
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + +   +EDQDY+ KI KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  ST 70
           S+
Sbjct: 609 SS 610

BLAST of CSPI07G21930 vs. TAIR10
Match: AT1G20950.1 (AT1G20950.1 Phosphofructokinase family protein)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-08
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

BLAST of CSPI07G21930 vs. NCBI nr
Match: gi|778729490|ref|XP_011659590.1| (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-28
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLE+ALDSISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 ILSSMSSSTKLHSSL 76
          ILSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

BLAST of CSPI07G21930 vs. NCBI nr
Match: gi|567874207|ref|XP_006429693.1| (hypothetical protein CICLE_v10013226mg [Citrus clementina])

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-07
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1

Query: 8  DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
          D++  G   ED++Y+ KI + Q YLD V+KI    CSQEVL+VAL+S++SL+ IL+ MSS
Sbjct: 19 DVKSAGLCTEDEEYITKIKEFQAYLDLVQKIAKPGCSQEVLKVALNSMASLVKILNCMSS 78

Query: 68 STKLHSSL 76
          + KL +SL
Sbjct: 79 TLKLRASL 86

BLAST of CSPI07G21930 vs. NCBI nr
Match: gi|720061943|ref|XP_010275338.1| (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [Nelumbo nucifera])

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-07
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 1

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSS 67
           D + I   +EDQDY+ +I +LQ Y+D VKK+V   CSQ+VL+ A+ S++S++ ILS MS 
Sbjct: 495 DSKTITLCIEDQDYMGRIKELQTYIDMVKKLVKPGCSQDVLKAAVSSMASVVNILSLMSP 554

Query: 68  STKLHSSL 76
           STK  SSL
Sbjct: 555 STKGQSSL 562

BLAST of CSPI07G21930 vs. NCBI nr
Match: gi|297744826|emb|CBI38094.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-06
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1

Query: 12 IGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSSSTKL 71
          I  +++DQDY  KI +LQ YLD+V +IV   CS EVL+VAL+SISSL+  LS +SSS K 
Sbjct: 24 IELLVQDQDYTGKIKELQAYLDKVNEIVKPGCSPEVLKVALNSISSLVNFLSHISSSPKP 83

Query: 72 HSSL 76
           +SL
Sbjct: 84 LASL 87

BLAST of CSPI07G21930 vs. NCBI nr
Match: gi|743920855|ref|XP_011004484.1| (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [Populus euphratica])

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-06
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 1

Query: 13  GTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITILSSMSSSTKLH 72
           G + EDQ+Y+++I KL  YLD VKK+V   CS EVL+ AL+S+S+L   L+ +SS T+ H
Sbjct: 68  GILTEDQEYIKEIKKLHAYLDMVKKMVRPGCSPEVLKTALNSMSALFNTLAFVSSGTRPH 127

Query: 73  SSL 76
           +SL
Sbjct: 128 ASL 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PFPA2_ARATH1.8e-0746.77Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arab... [more]
PFPA_SOLTU5.2e-0745.31Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanu... [more]
PFPA_RICCO8.8e-0748.39Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinu... [more]
PFPA1_ARATH8.8e-0744.26Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arab... [more]
Match NameE-valueIdentityDescription
A0A0A0KAL4_CUCSA1.7e-2898.67Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447890 PE=4 SV=1[more]
V4S648_9ROSI9.5e-0851.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013226mg PE=4 SV=1[more]
F6I1G6_VITVI8.0e-0756.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0045g01120 PE=4 SV=... [more]
B9HDG2_POPTR6.8e-0649.21Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02540g PE=4 SV=1[more]
A0A067KKJ2_JATCU8.9e-0650.00Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Jatrop... [more]
Match NameE-valueIdentityDescription
AT1G76550.11.0e-0846.77 Phosphofructokinase family protein[more]
AT1G20950.15.0e-0844.26 Phosphofructokinase family protein[more]
Match NameE-valueIdentityDescription
gi|778729490|ref|XP_011659590.1|2.4e-2898.67PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alph... [more]
gi|567874207|ref|XP_006429693.1|1.4e-0751.47hypothetical protein CICLE_v10013226mg [Citrus clementina][more]
gi|720061943|ref|XP_010275338.1|4.0e-0751.47PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alph... [more]
gi|297744826|emb|CBI38094.3|1.2e-0656.25unnamed protein product [Vitis vinifera][more]
gi|743920855|ref|XP_011004484.1|3.4e-0650.79PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alph... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G21930.1CSPI07G21930.1mRNA
CSPI07G21930.2CSPI07G21930.2mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13697PHOSPHOFRUCTOKINASEcoord: 8..69
score: 9.6
NoneNo IPR availablePANTHERPTHR13697:SF1PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE SUBUNIT ALPHA 1-RELATEDcoord: 8..69
score: 9.6