CSPI07G21930.2 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTCGTGTACGATTCAACCTCCCCTCACTTCACCGCAGCCAGATTCCGACAAGCTTCCGACGTCTACGGCATTATCGCTCTGTTCTTCTTCCAATCTACTCGCCATTAAGTTTCTGTTTTGGGATTCAGTAAGCTCATTCATTTCTGAATTTTCTTTAAAATTCGATACAAATTACCGAAAGATAGTTTCTTTTTGCTTCGAATTTGTTCCAACAAATTGAATTTCTTCTCTCTCTTGGACGATTTGGGCATTCCGTTTCTTTTCTGTACTAAGAATGTGCTATATGAGCTTGATCAGAAGTAGAATATCCACGAGTCCTGAAGGGTGATTTGGTTTTCACTTTTCTTCGAGCTGATTAGGTTATATGGTTATTTTCTGTGTTTGTTCTTGTTCTGTGCTTCCGTACTTCCGTTCTGAAGTTTAATGTTTTTACATTACATTGCAAGCACCTGGACTATTATCACAGAACAATTGTTTGACTCTAGTCAAATTTGATGCTGCTTCCAGTCTAATTTCAGGATACGCTTGAATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAAATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAACTACTGCTTATTAGTTTCTATCTTGAAATGAAACCATAGTTGTTACTGTATTTTCCTCATGGTCATAGAACAGCTATCCTTCAATCAATTTATCATAACTTGCTTGCTTATTGCTCGATGGCTTATTAGTTAGGCAATTTCTTATCAATATGATTTTGAGTATTTTGTAATTTCTTAGTGCAGCCAGAAAATTACGTGTCTTTTCTCCTAGTGCACTGTGCAGTGGTGATTTAGGACTCCCTGAGCCATGAACAAGAATGAAGGAAACTAGAAAACGATAGAAGACAGCTTAATCTAGAAACAAGAAATAAGTAATGTACTATCAAGTTTTAACAGTTTTGGTATCTTTTCAAGGGGTTGTTCTTTGATTGGAAAAAAATGCTTTTCTATATAGTATTCTCTCTATCGTTCATAAAGAGGAGGTTAGGGTGTAGTTTGTTGGATTGTTTGCCTAAAAAAAAGGTATACATTAGGCAAACAAAACAAAGTAGGTATGTATAATGAGTAAAGAAATGAAAAAGAATGAGTAAAGAATCACATCCTTACCATTCTATTTGAAACTTGTGAGTCTTGTAGACTTTTACATGTCTTCTCCTTCACTTACTATCATAAAGATTGTTCTAAGATAAGACAGCTCGTGCAGATTTATAGTTGTTAGAATACCTTGAATGTGTTTTCTGGTGTTTTAGAATGATCCTACACGGGTTTTGCTAGGATTAAAGGAGTGCACTATACATAAACTCTCTAGCTCTAGAGGCACCACTGGAATCTTAAGTTTAACATTTTCTCTTTAATAACAAAAACTGCTCATCCCCTGCCCATGCACGTAGCTAACTCATTGTCTCTATTTGGATTCTCTACGGTTTTAGTTTTCTTCTCATCTCAACAGTTATTATTACGAAAAATGATGGAACCAAAACAAAGTTCTTTTTAAATTTGACTAATTGATAGAATGAACTTTTGTTTCCAAGATTCTTAATTTGTAAAGTAATAATGTTCTTATAAATCATTATTTTGATGTCTGCTTTGTGGTTCATATTCTACTCAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGATGGTATAAGAAGGTGAACTTCAAAACATGTATGATTATGTAAATAGTTACTTGTGTAAATAATATAACATGTTGTATTCTTGTTTGTTTCCTTTGCTCATCTTCGTTTTGTGAAGAGCAGAGAAAAGCTTACGAGCATAAACATGTGCAAATTTATGAAAGTCAATGGGCTTCGATTTTTTTTTTTTTTTTCCCTTCTGTTCGAATGATCCATTGATTTATGGAAGATGGATTTAGTAAATTTATGTTAAGCTTTACAAAACAAGAGATGTGTATCAAATGTTCCAAGGGGCCC ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAAATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAAATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA
BLAST of CSPI07G21930.2 vs. Swiss-Prot
Match: PFPA2_ARATH (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana GN=PFP-ALPHA2 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-07 Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum GN=PFP-ALPHA PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 5.2e-07 Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 8.8e-07 Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. Swiss-Prot
Match: PFPA1_ARATH (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana GN=PFP-ALPHA1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 8.8e-07 Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. TrEMBL
Match: A0A0A0KAL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447890 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.7e-28 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. TrEMBL
Match: V4S648_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013226mg PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.5e-08 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. TrEMBL
Match: F6I1G6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0045g01120 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 8.0e-07 Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. TrEMBL
Match: B9HDG2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02540g PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.8e-06 Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. TrEMBL
Match: A0A067KKJ2_JATCU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Jatropha curcas GN=PFP-ALPHA PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.9e-06 Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. TAIR10
Match: AT1G76550.1 (AT1G76550.1 Phosphofructokinase family protein) HSP 1 Score: 56.2 bits (134), Expect = 1.0e-08 Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. TAIR10
Match: AT1G20950.1 (AT1G20950.1 Phosphofructokinase family protein) HSP 1 Score: 53.9 bits (128), Expect = 5.0e-08 Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. NCBI nr
Match: gi|778729490|ref|XP_011659590.1| (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 2.4e-28 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. NCBI nr
Match: gi|567874207|ref|XP_006429693.1| (hypothetical protein CICLE_v10013226mg [Citrus clementina]) HSP 1 Score: 63.9 bits (154), Expect = 1.4e-07 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. NCBI nr
Match: gi|720061943|ref|XP_010275338.1| (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [Nelumbo nucifera]) HSP 1 Score: 62.4 bits (150), Expect = 4.0e-07 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. NCBI nr
Match: gi|297744826|emb|CBI38094.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-06 Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of CSPI07G21930.2 vs. NCBI nr
Match: gi|743920855|ref|XP_011004484.1| (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [Populus euphratica]) HSP 1 Score: 59.3 bits (142), Expect = 3.4e-06 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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