CSPI07G19670 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G19670
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 17248862 .. 17249167 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTAAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

mRNA sequence

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTAAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

Coding sequence (CDS)

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTAAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA
Homology
[Close]
BLAST of CSPI07G19670 vs. TrEMBL
Match: A0A0A0K8G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429600 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 7.6e-53
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 102
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

[Close]
BLAST of CSPI07G19670 vs. NCBI nr
Match: gi|700189941|gb|KGN45174.1| (hypothetical protein Csa_7G429600 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 102
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

The following BLAST results are available for this feature:
BLAST of CSPI07G19670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G19670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8G2_CUCSA7.6e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429600 PE=4 SV=1[more]
BLAST of CSPI07G19670 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G19670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189941|gb|KGN45174.1|1.1e-52100.00hypothetical protein Csa_7G429600 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G19670.1CSPI07G19670.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G19670Csa7G429600Cucumber (Chinese Long) v2cpicuB354
CSPI07G19670ClCG09G003720Watermelon (Charleston Gray)cpiwcgB553
CSPI07G19670CsGy7G017990Cucumber (Gy14) v2cgybcpiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G19670Silver-seed gourdcarcpiB0967
CSPI07G19670Cucumber (Chinese Long) v3cpicucB383
CSPI07G19670Cucumber (Chinese Long) v3cpicucB414
CSPI07G19670Watermelon (97103) v2cpiwmbB561
CSPI07G19670Watermelon (97103) v2cpiwmbB596
CSPI07G19670Wax gourdcpiwgoB716
CSPI07G19670Cucurbita maxima (Rimu)cmacpiB934
CSPI07G19670Wild cucumber (PI 183967)cpicpiB054
CSPI07G19670Wild cucumber (PI 183967)cpicpiB142
CSPI07G19670Cucumber (Gy14) v1cgycpiB032
CSPI07G19670Cucumber (Gy14) v1cgycpiB211
CSPI07G19670Cucurbita maxima (Rimu)cmacpiB081
CSPI07G19670Cucurbita maxima (Rimu)cmacpiB392
CSPI07G19670Cucurbita maxima (Rimu)cmacpiB581
CSPI07G19670Cucurbita maxima (Rimu)cmacpiB652
CSPI07G19670Cucurbita moschata (Rifu)cmocpiB075
CSPI07G19670Cucurbita moschata (Rifu)cmocpiB381
CSPI07G19670Cucurbita moschata (Rifu)cmocpiB569
CSPI07G19670Cucurbita moschata (Rifu)cmocpiB645
CSPI07G19670Cucurbita moschata (Rifu)cmocpiB913
CSPI07G19670Cucumber (Chinese Long) v2cpicuB338
CSPI07G19670Melon (DHL92) v3.5.1cpimeB525
CSPI07G19670Watermelon (Charleston Gray)cpiwcgB560
CSPI07G19670Watermelon (Charleston Gray)cpiwcgB572
CSPI07G19670Watermelon (97103) v1cpiwmB585
CSPI07G19670Watermelon (97103) v1cpiwmB619
CSPI07G19670Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G19670Cucurbita pepo (Zucchini)cpecpiB302
CSPI07G19670Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G19670Cucurbita pepo (Zucchini)cpecpiB377
CSPI07G19670Bottle gourd (USVL1VR-Ls)cpilsiB503
CSPI07G19670Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G19670Bottle gourd (USVL1VR-Ls)cpilsiB545
CSPI07G19670Melon (DHL92) v3.6.1cpimedB512
CSPI07G19670Melon (DHL92) v3.6.1cpimedB539
CSPI07G19670Melon (DHL92) v3.6.1cpimedB550
CSPI07G19670Cucumber (Gy14) v2cgybcpiB047
CSPI07G19670Silver-seed gourdcarcpiB0391
CSPI07G19670Silver-seed gourdcarcpiB0489
CSPI07G19670Silver-seed gourdcarcpiB0508
CSPI07G19670Silver-seed gourdcarcpiB0561