CSPI07G19670.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI07G19670.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 17248862 .. 17249167 (-)
Sequence length306
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTAAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

mRNA sequence

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTAAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

Coding sequence (CDS)

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTAAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA
Homology
[Close]
BLAST of CSPI07G19670.1 vs. TrEMBL
Match: A0A0A0K8G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429600 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 7.6e-53
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 102
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

[Close]
BLAST of CSPI07G19670.1 vs. NCBI nr
Match: gi|700189941|gb|KGN45174.1| (hypothetical protein Csa_7G429600 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 102
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

The following BLAST results are available for this feature:
BLAST of CSPI07G19670.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G19670.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8G2_CUCSA7.6e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429600 PE=4 SV=1[more]
BLAST of CSPI07G19670.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G19670.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189941|gb|KGN45174.1|1.1e-52100.00hypothetical protein Csa_7G429600 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI07G19670CSPI07G19670gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI07G19670.1CSPI07G19670.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G19670.1.cds1CSPI07G19670.1.cds1CDS