Csa7G429600 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G429600
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 16712163 .. 16712468 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTGAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

mRNA sequence

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTGAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

Coding sequence (CDS)

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTGAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

Protein sequence

MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFGLSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS*
Homology
[Close]
BLAST of Csa7G429600 vs. TrEMBL
Match: A0A0A0K8G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429600 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.5e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 102
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

[Close]
BLAST of Csa7G429600 vs. NCBI nr
Match: gi|700189941|gb|KGN45174.1| (hypothetical protein Csa_7G429600 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 9.3e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 102
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

The following BLAST results are available for this feature:
BLAST of Csa7G429600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8G2_CUCSA6.5e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429600 PE=4 SV=1[more]
BLAST of Csa7G429600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189941|gb|KGN45174.1|9.3e-52100.00hypothetical protein Csa_7G429600 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G429600.1Csa7G429600.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G429600ClCG09G003720Watermelon (Charleston Gray)cuwcgB524
Csa7G429600CSPI07G19670Wild cucumber (PI 183967)cpicuB354
Csa7G429600CsGy7G017990Cucumber (Gy14) v2cgybcuB323
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G429600Melon (DHL92) v3.5.1cumeB521
Csa7G429600Melon (DHL92) v3.5.1cumeB547
Csa7G429600Watermelon (Charleston Gray)cuwcgB544
Csa7G429600Watermelon (97103) v1cuwmB566
Csa7G429600Watermelon (97103) v1cuwmB602
Csa7G429600Cucurbita pepo (Zucchini)cpecuB161
Csa7G429600Cucurbita pepo (Zucchini)cpecuB302
Csa7G429600Cucurbita pepo (Zucchini)cpecuB343
Csa7G429600Cucurbita pepo (Zucchini)cpecuB768
Csa7G429600Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G429600Bottle gourd (USVL1VR-Ls)culsiB530
Csa7G429600Cucumber (Gy14) v2cgybcuB049
Csa7G429600Melon (DHL92) v3.6.1cumedB501
Csa7G429600Melon (DHL92) v3.6.1cumedB525
Csa7G429600Silver-seed gourdcarcuB0387
Csa7G429600Silver-seed gourdcarcuB0484
Csa7G429600Silver-seed gourdcarcuB0554
Csa7G429600Silver-seed gourdcarcuB0944
Csa7G429600Watermelon (97103) v2cuwmbB537
Csa7G429600Watermelon (97103) v2cuwmbB570
Csa7G429600Wax gourdcuwgoB704
Csa7G429600Cucumber (Chinese Long) v2cucuB047
Csa7G429600Cucumber (Chinese Long) v2cucuB127
Csa7G429600Cucumber (Gy14) v1cgycuB031
Csa7G429600Cucumber (Gy14) v1cgycuB208
Csa7G429600Cucurbita maxima (Rimu)cmacuB083
Csa7G429600Cucurbita maxima (Rimu)cmacuB388
Csa7G429600Cucurbita maxima (Rimu)cmacuB577
Csa7G429600Cucurbita maxima (Rimu)cmacuB646
Csa7G429600Cucurbita maxima (Rimu)cmacuB914
Csa7G429600Cucurbita moschata (Rifu)cmocuB073
Csa7G429600Cucurbita moschata (Rifu)cmocuB378
Csa7G429600Cucurbita moschata (Rifu)cmocuB564
Csa7G429600Cucurbita moschata (Rifu)cmocuB635
Csa7G429600Cucurbita moschata (Rifu)cmocuB900