CSPI07G17740 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G17740
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 15967774 .. 15968178 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCGGCAAGATGTTTCAAGCTCTTACCCACCCTTTTCTTAGTGTTTGTTTGGCAATATTGTGCTAAAGTTGGGGCCAGTGGCTTTTTCGACGACTTTGACAGCGGTTCATTTGGATCAAGTGGTGTTGGGATGCTAGTGATCAAGAATCGTGGCGTTGCACCTAACTCAAACATGATAGATCCTAAAGAATTAGCTCCCGAAACTACTCGTCCGATTGAGACTAAAACTACACAGAATAAAGATAACAAAGATTCATCATCCAATATCAAAATTACAGCTAATAACAGAAAGATTGGCACTACTGTTTCATATGATCGTATTAAAACTAATATGAAGATTGGTGGAAACATTGATCTTTTTGATCATGGAAGAATAATTATTCCAAAGATCCAAGTTTAA

mRNA sequence

ATGGCTGCGGCAAGATGTTTCAAGCTCTTACCCACCCTTTTCTTAGTGTTTGTTTGGCAATATTGTGCTAAAGTTGGGGCCAGTGGCTTTTTCGACGACTTTGACAGCGGTTCATTTGGATCAAGTGGTGTTGGGATGCTAGTGATCAAGAATCGTGGCGTTGCACCTAACTCAAACATGATAGATCCTAAAGAATTAGCTCCCGAAACTACTCGTCCGATTGAGACTAAAACTACACAGAATAAAGATAACAAAGATTCATCATCCAATATCAAAATTACAGCTAATAACAGAAAGATTGGCACTACTGTTTCATATGATCGTATTAAAACTAATATGAAGATTGGTGGAAACATTGATCTTTTTGATCATGGAAGAATAATTATTCCAAAGATCCAAGTTTAA

Coding sequence (CDS)

ATGGCTGCGGCAAGATGTTTCAAGCTCTTACCCACCCTTTTCTTAGTGTTTGTTTGGCAATATTGTGCTAAAGTTGGGGCCAGTGGCTTTTTCGACGACTTTGACAGCGGTTCATTTGGATCAAGTGGTGTTGGGATGCTAGTGATCAAGAATCGTGGCGTTGCACCTAACTCAAACATGATAGATCCTAAAGAATTAGCTCCCGAAACTACTCGTCCGATTGAGACTAAAACTACACAGAATAAAGATAACAAAGATTCATCATCCAATATCAAAATTACAGCTAATAACAGAAAGATTGGCACTACTGTTTCATATGATCGTATTAAAACTAATATGAAGATTGGTGGAAACATTGATCTTTTTGATCATGGAAGAATAATTATTCCAAAGATCCAAGTTTAA
Homology
[Close]
BLAST of CSPI07G17740 vs. TrEMBL
Match: A0A0A0K668_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G399270 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 1 

Query: 1   MAAARCFKLLPTLFLVFVWQYCAKVGASGFFDDFDSGSFGSSGVGMLVIKNRGVAPNSNM 60
           MA ARCFKLLPTLFLVFVWQYCAKVGASGFFDDFDSGSFGSSGVGMLVIKNRGVAPNSNM
Sbjct: 1   MAVARCFKLLPTLFLVFVWQYCAKVGASGFFDDFDSGSFGSSGVGMLVIKNRGVAPNSNM 60

Query: 61  IDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTNMKIGGNID 120
           IDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTNMKIGGNID
Sbjct: 61  IDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTNMKIGGNID 120

Query: 121 LFDHGRIIIPKIQV 135
           LFDHGRIIIPKIQV
Sbjct: 121 LFDHGRIIIPKIQV 134

[Close]
BLAST of CSPI07G17740 vs. NCBI nr
Match: gi|700189735|gb|KGN44968.1| (hypothetical protein Csa_7G399270 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 1 

Query: 1   MAAARCFKLLPTLFLVFVWQYCAKVGASGFFDDFDSGSFGSSGVGMLVIKNRGVAPNSNM 60
           MA ARCFKLLPTLFLVFVWQYCAKVGASGFFDDFDSGSFGSSGVGMLVIKNRGVAPNSNM
Sbjct: 1   MAVARCFKLLPTLFLVFVWQYCAKVGASGFFDDFDSGSFGSSGVGMLVIKNRGVAPNSNM 60

Query: 61  IDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTNMKIGGNID 120
           IDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTNMKIGGNID
Sbjct: 61  IDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTNMKIGGNID 120

Query: 121 LFDHGRIIIPKIQV 135
           LFDHGRIIIPKIQV
Sbjct: 121 LFDHGRIIIPKIQV 134

The following BLAST results are available for this feature:
BLAST of CSPI07G17740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G17740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K668_CUCSA1.1e-6799.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G399270 PE=4 SV=1[more]
BLAST of CSPI07G17740 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G17740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189735|gb|KGN44968.1|1.6e-6799.25hypothetical protein Csa_7G399270 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G17740.1CSPI07G17740.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G17740MELO3C015977.2Melon (DHL92) v3.6.1cpimedB520
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G17740Watermelon (97103) v2cpiwmbB541
CSPI07G17740Watermelon (97103) v2cpiwmbB590
CSPI07G17740Watermelon (97103) v2cpiwmbB598
CSPI07G17740Wax gourdcpiwgoB658
CSPI07G17740Wax gourdcpiwgoB666
CSPI07G17740Wax gourdcpiwgoB703
CSPI07G17740Cucurbita maxima (Rimu)cmacpiB934
CSPI07G17740Wild cucumber (PI 183967)cpicpiB167
CSPI07G17740Cucumber (Gy14) v1cgycpiB106
CSPI07G17740Cucumber (Gy14) v1cgycpiB325
CSPI07G17740Cucurbita maxima (Rimu)cmacpiB392
CSPI07G17740Cucurbita moschata (Rifu)cmocpiB381
CSPI07G17740Cucurbita moschata (Rifu)cmocpiB913
CSPI07G17740Cucumber (Chinese Long) v2cpicuB345
CSPI07G17740Cucumber (Chinese Long) v2cpicuB354
CSPI07G17740Melon (DHL92) v3.5.1cpimeB540
CSPI07G17740Melon (DHL92) v3.5.1cpimeB572
CSPI07G17740Watermelon (Charleston Gray)cpiwcgB547
CSPI07G17740Watermelon (Charleston Gray)cpiwcgB555
CSPI07G17740Watermelon (Charleston Gray)cpiwcgB560
CSPI07G17740Watermelon (97103) v1cpiwmB578
CSPI07G17740Watermelon (97103) v1cpiwmB587
CSPI07G17740Watermelon (97103) v1cpiwmB593
CSPI07G17740Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G17740Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G17740Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G17740Bottle gourd (USVL1VR-Ls)cpilsiB530
CSPI07G17740Melon (DHL92) v3.6.1cpimedB525
CSPI07G17740Melon (DHL92) v3.6.1cpimedB557
CSPI07G17740Cucumber (Gy14) v2cgybcpiB331
CSPI07G17740Silver-seed gourdcarcpiB0124
CSPI07G17740Silver-seed gourdcarcpiB0599
CSPI07G17740Silver-seed gourdcarcpiB0855
CSPI07G17740Cucumber (Chinese Long) v3cpicucB402
CSPI07G17740Cucumber (Chinese Long) v3cpicucB414