CSPI07G16950 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G16950
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 15500829 .. 15501294 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCTCTAAGAATTGGCTTCTGATGAAAATTGAGATCAACCAACAAATTACAAAAGATGATTTTCCCAAAAGAAGGTATTCATCTACAAAGAAAGATTGATAGCATACAAGAAGCAAAATCAGAAGCTTTGGCACGACCGCAGTTGAATTCAAGGACAACGATGAATGATATAAGCTCGGCGCGGTTGAGGCTGGCAGATGACCATGAGAGTGAGAGCTATAACAATGGCCACCAAAAGTCCCATAAGATCCAATCCACCACCACCATCATCATCAGAGCAACAAAGCTTCCCCATGAAATTTACAGAAAAGAAAGAACTTTCTTCCCAACAAAGTCTCAAATTGAGCCTCTTGAATCAATTTCTTCTAATTAATAAAGAAACAAACATTAATTGTGTCGATGTCAATACATCACCTCAAAGGAGGGCCCCATATGACAATGGTAGACTTTATAAAAGTCTCATACT

mRNA sequence

ATGATTTTCCCAAAAGAAGGTATTCATCTACAAAGAAAGATTGATAGCATACAAGAAGCAAAATCAGAAGCTTTGGCACGACCGCAGTTGAATTCAAGGACAACGATGAATGATATAAGCTCGGCGCGGTTGAGGCTGGCAGATGACCATGAGAGTGAGAGCTATAACAATGGCCACCAAAAGTCCCATAAGATCCAATCCACCACCACCATCATCATCAGAGCAACAAAGCTTCCCCATGAAATTTACAGAAAAGAAAGAACTTTCTTCCCAACAAAGTCTCAAATTGAGCCTCTTGAATCAATTTCTTCTAATTAA

Coding sequence (CDS)

ATGATTTTCCCAAAAGAAGGTATTCATCTACAAAGAAAGATTGATAGCATACAAGAAGCAAAATCAGAAGCTTTGGCACGACCGCAGTTGAATTCAAGGACAACGATGAATGATATAAGCTCGGCGCGGTTGAGGCTGGCAGATGACCATGAGAGTGAGAGCTATAACAATGGCCACCAAAAGTCCCATAAGATCCAATCCACCACCACCATCATCATCAGAGCAACAAAGCTTCCCCATGAAATTTACAGAAAAGAAAGAACTTTCTTCCCAACAAAGTCTCAAATTGAGCCTCTTGAATCAATTTCTTCTAATTAA
Homology
[Close]
BLAST of CSPI07G16950 vs. TrEMBL
Match: A0A0A0K5W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393980 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-49
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 1 

Query: 1   MIFPKEGIHLQRKIDSIQEAKSEALARPQLNSRTTMNDISSARLRLADDHESESYNNGHQ 60
           MIFPKEGIHLQRKIDSIQEAKSEALARPQ NSRTTMNDISSARLRLADDHESESYNNGHQ
Sbjct: 1   MIFPKEGIHLQRKIDSIQEAKSEALARPQSNSRTTMNDISSARLRLADDHESESYNNGHQ 60

Query: 61  KSHKIQSTTTIIIRATKLPHEIYRKERTFFPTKSQIEPLESISSN 106
           KSHKIQSTTTIIIRATKLPHEIYRKERTFFPTKSQIEPLESISSN
Sbjct: 61  KSHKIQSTTTIIIRATKLPHEIYRKERTFFPTKSQIEPLESISSN 105

[Close]
BLAST of CSPI07G16950 vs. NCBI nr
Match: gi|700189645|gb|KGN44878.1| (hypothetical protein Csa_7G393980 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 2.6e-49
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 1 

Query: 1   MIFPKEGIHLQRKIDSIQEAKSEALARPQLNSRTTMNDISSARLRLADDHESESYNNGHQ 60
           MIFPKEGIHLQRKIDSIQEAKSEALARPQ NSRTTMNDISSARLRLADDHESESYNNGHQ
Sbjct: 1   MIFPKEGIHLQRKIDSIQEAKSEALARPQSNSRTTMNDISSARLRLADDHESESYNNGHQ 60

Query: 61  KSHKIQSTTTIIIRATKLPHEIYRKERTFFPTKSQIEPLESISSN 106
           KSHKIQSTTTIIIRATKLPHEIYRKERTFFPTKSQIEPLESISSN
Sbjct: 61  KSHKIQSTTTIIIRATKLPHEIYRKERTFFPTKSQIEPLESISSN 105

The following BLAST results are available for this feature:
BLAST of CSPI07G16950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G16950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5W1_CUCSA1.8e-4999.05Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393980 PE=4 SV=1[more]
BLAST of CSPI07G16950 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G16950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189645|gb|KGN44878.1|2.6e-4999.05hypothetical protein Csa_7G393980 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G16950.1CSPI07G16950.1mRNA