CSPI07G10700 (gene) Wild cucumber (PI 183967)

NameCSPI07G10700
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCysteine-rich TM module stress tolerance protein
LocationChr7 : 8801077 .. 8801969 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAAATATGTATTTCTATAAATATAAATCCAACCCGCCCATGCTTTCTCATAACTTACATTTCTCCATTTCCATCATAATTATATCTGTGCAATTCACACCTCCATTTTACGATCTTGATTCTTTACGGCCTTCCGTTTTTTATTTTCCATCATCATGAGCCAATATCGCAACCAAGAAATTAGCAGTAAGTATACATTAGAGTTTATTTTTTTGGTAGTTTAATTTCGACGGCGCCGTTTGTAATAATTTGAAATTGGTTTGTCTTGTGGTTGCAGTGGGTTATCCGGCACCACCACCGTCGTATGCGGCGGGGGAGCAAGCGAAAGAGGGGAAGTCGGGGCCTTATGTTGCAGCCCCGCCTCCGGTTGGATATCCGGTGAGGGACGGGCCACAGTACCCTCACCAAACTAATTTTGACGCTCAAACTCAATCTAGAGGAGATGGGTTCTGGAAAGGATGGTTAGTTTCTTTAAATTCCATTTCTTTTTCTTTTTCTTTTTTTTCAAACAAGGAAGTATATATTGTTAAGTTGATTGTTTGGGTAATCAAACTAATGTGGAATTTGATGGATGTGTGTGTTTTTGTAGCTGTGCTGCATTGTGTTGCTGCTGGGTATTGGATTGTATCTTTTGATCAGGATGCTGACTTAGCTACCATTTGTCGGTTGTTGGTTTTGGTTGAGATGACACCCAGTTTTTTCAGTCTTCATTAGTTTAGTTTTGCTCTATTTGTTATTCTTTTATTATGTATTATATATAATGTTGTTTATGTATCGCCCCCTCTTGTCTTTTTGGGGCTTTGTATTTTCATCTTTATTCCATACTCATTTTTTGTATCAATAAATAATATGCATATTTTCTTGTGCAATAGTAATACTATTCTCTTTTCAA

mRNA sequence

ATGAGCCAATATCGCAACCAAGAAATTAGCATGGGTTATCCGGCACCACCACCGTCGTATGCGGCGGGGGAGCAAGCGAAAGAGGGGAAGTCGGGGCCTTATGTTGCAGCCCCGCCTCCGGTTGGATATCCGGTGAGGGACGGGCCACAGTACCCTCACCAAACTAATTTTGACGCTCAAACTCAATCTAGAGGAGATGGGTTCTGGAAAGGATGCTGTGCTGCATTGTGTTGCTGCTGGGTATTGGATTGTATCTTTTGA

Coding sequence (CDS)

ATGAGCCAATATCGCAACCAAGAAATTAGCATGGGTTATCCGGCACCACCACCGTCGTATGCGGCGGGGGAGCAAGCGAAAGAGGGGAAGTCGGGGCCTTATGTTGCAGCCCCGCCTCCGGTTGGATATCCGGTGAGGGACGGGCCACAGTACCCTCACCAAACTAATTTTGACGCTCAAACTCAATCTAGAGGAGATGGGTTCTGGAAAGGATGCTGTGCTGCATTGTGTTGCTGCTGGGTATTGGATTGTATCTTTTGA
BLAST of CSPI07G10700 vs. TrEMBL
Match: A0A0A0K5N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237300 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 7.7e-46
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60
          MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ
Sbjct: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          TQSRGDGFWKGCCAALCCCWVLDCIF
Sbjct: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 86

BLAST of CSPI07G10700 vs. TrEMBL
Match: A0A0S3SKA6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G220400 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.7e-16
Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNF 60
          M+ Y  QE  + YP    +Y+         S PYV APPP+GYP +D P    YP Q   
Sbjct: 1  MNHYNQQEAPVSYPPKVQAYS---------SAPYVTAPPPMGYPSKDQPAAVGYPQQ-RV 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T +RGDGFWKGCCAALCCCW+LDC F
Sbjct: 61 PEETTTRGDGFWKGCCAALCCCWILDCCF 79

BLAST of CSPI07G10700 vs. TrEMBL
Match: V7BXH8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057200g PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.3e-16
Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = 1

Query: 1  MSQYRNQ-EISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTN 60
          M+ + NQ E  + YPA   +Y+         S PYV+APPP+GYP +D P    YP Q  
Sbjct: 1  MNHFNNQQEAPVSYPAQVQAYS---------SAPYVSAPPPMGYPSKDEPATVGYPPQ-R 60

Query: 61 FDAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
             +T+S+GDGFWKGCCAALCCCWVLDC F
Sbjct: 61 VPEETRSKGDGFWKGCCAALCCCWVLDCCF 80

BLAST of CSPI07G10700 vs. TrEMBL
Match: V7BW57_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057400g PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.1e-15
Identity = 43/70 (61.43%), Postives = 47/70 (67.14%), Query Frame = 1

Query: 17 PPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQTQSRGDGFWKGCCAAL 76
          P SYA   Q +   S PYV APPP+GYP +DG     Q     +T SRGDGFWKGCCAAL
Sbjct: 11 PVSYAP--QGQVYSSTPYVTAPPPMGYPSKDGSVGYPQQRVPEETTSRGDGFWKGCCAAL 70

Query: 77 CCCWVLDCIF 87
          CCCWVLDC F
Sbjct: 71 CCCWVLDCCF 78

BLAST of CSPI07G10700 vs. TrEMBL
Match: A0A0B2QZ76_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011417 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.4e-15
Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNF 60
          MS++ NQ+ +     PP               PYV+APPP+GYP +D P    YP Q   
Sbjct: 1  MSRFNNQQEAPAVSYPP--------------APYVSAPPPMGYPSKDDPTAVGYPQQ-RV 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T SRGDGFWKGCCAALCCCWVLDC F
Sbjct: 61 PEETTSRGDGFWKGCCAALCCCWVLDCCF 74

BLAST of CSPI07G10700 vs. TAIR10
Match: AT2G32210.1 (AT2G32210.1 unknown protein)

HSP 1 Score: 73.6 bits (179), Expect = 6.9e-14
Identity = 42/86 (48.84%), Postives = 49/86 (56.98%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60
          MSQY   + S  YP PP S           +GPYVA PPP+GYP  D     H T    +
Sbjct: 1  MSQYSQNQSSGAYPTPPVS-----------TGPYVA-PPPLGYPTNDTS---HATVATVE 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          T+S+GDGF KGC AA+CCC VLD  F
Sbjct: 61 TKSKGDGFLKGCLAAMCCCCVLDACF 71

BLAST of CSPI07G10700 vs. TAIR10
Match: AT2G32190.1 (AT2G32190.1 unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-13
Identity = 40/86 (46.51%), Postives = 48/86 (55.81%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60
          MSQY   + S  YP PP S           +GPY+  PPP+GYP  D     H T    +
Sbjct: 1  MSQYSQNQSSGAYPTPPVS-----------TGPYMT-PPPLGYPTSD---ISHATVAPVE 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          T+S+GDGF KGC AA+CCC VLD  F
Sbjct: 61 TKSKGDGFLKGCLAAMCCCCVLDACF 71

BLAST of CSPI07G10700 vs. TAIR10
Match: AT3G22240.1 (AT3G22240.1 unknown protein)

HSP 1 Score: 70.5 bits (171), Expect = 5.9e-13
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 1

Query: 24 EQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQTQSRGDGFWKGCCAALCCCWVLD 83
          E+  +  SGPY + PPP+GYP RD            +T+S+GDGFWKGCCAA+CCC VLD
Sbjct: 12 EKPSQTSSGPYTS-PPPIGYPTRDA-MVGDPPAAAVETKSKGDGFWKGCCAAICCCCVLD 71

Query: 84 CIF 87
            F
Sbjct: 72 ACF 72

BLAST of CSPI07G10700 vs. TAIR10
Match: AT1G56060.1 (AT1G56060.1 unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-09
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 1

Query: 34 YVAAPPPVGYPV--RDGPQYPHQTNFDAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
          YV APPP+GYPV  +D PQ   Q   + Q++  G GF +GC AA+CCC VLDC+F
Sbjct: 19 YVTAPPPMGYPVMMKDSPQTV-QPPHEGQSKGSG-GFLRGCLAAMCCCCVLDCVF 71

BLAST of CSPI07G10700 vs. TAIR10
Match: AT1G05340.1 (AT1G05340.1 unknown protein)

HSP 1 Score: 58.2 bits (139), Expect = 3.0e-09
Identity = 32/86 (37.21%), Postives = 43/86 (50.00%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60
          MSQY + + +   P PP S                + PPP+GYP    P +        +
Sbjct: 1  MSQYDHNQSAGANPPPPMSTCT-------------SPPPPIGYPTNQ-PSHGSVAQGKVE 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          T+S+GDGF+KGC AA+CCC  LD  F
Sbjct: 61 TKSKGDGFFKGCLAAMCCCCALDICF 72

BLAST of CSPI07G10700 vs. NCBI nr
Match: gi|778725970|ref|XP_011659032.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-45
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60
          MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ
Sbjct: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          TQSRGDGFWKGCCAALCCCWVLDCIF
Sbjct: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 86

BLAST of CSPI07G10700 vs. NCBI nr
Match: gi|659092574|ref|XP_008447127.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-44
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60
          MSQYRNQEI MGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTN DAQ
Sbjct: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          TQSRGDGFWKGCCAALCCCWVLDCIF
Sbjct: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 86

BLAST of CSPI07G10700 vs. NCBI nr
Match: gi|965606090|dbj|BAT93266.1| (hypothetical protein VIGAN_07220400 [Vigna angularis var. angularis])

HSP 1 Score: 92.0 bits (227), Expect = 5.3e-16
Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNF 60
          M+ Y  QE  + YP    +Y+         S PYV APPP+GYP +D P    YP Q   
Sbjct: 1  MNHYNQQEAPVSYPPKVQAYS---------SAPYVTAPPPMGYPSKDQPAAVGYPQQ-RV 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T +RGDGFWKGCCAALCCCW+LDC F
Sbjct: 61 PEETTTRGDGFWKGCCAALCCCWILDCCF 79

BLAST of CSPI07G10700 vs. NCBI nr
Match: gi|950973095|ref|XP_014500656.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Vigna radiata var. radiata])

HSP 1 Score: 92.0 bits (227), Expect = 5.3e-16
Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNF 60
          M+ +  QE  + YPA   +Y+         S PYV+APPP+GYP +D P    YP +   
Sbjct: 1  MNHFNQQEAPVSYPAQVQAYS---------SAPYVSAPPPMGYPSKDEPAAVGYPQRV-- 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T SRGDGFWKGCCAALCCCW+LDC F
Sbjct: 61 PEETTSRGDGFWKGCCAALCCCWILDCCF 78

BLAST of CSPI07G10700 vs. NCBI nr
Match: gi|568855524|ref|XP_006481354.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like isoform X1 [Citrus sinensis])

HSP 1 Score: 91.7 bits (226), Expect = 7.0e-16
Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = 1

Query: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60
          MS Y   + S+ YP PPPS  AG          YVAAPPP GYP +DG  + +  N   +
Sbjct: 1  MSSYNQNQSSVAYPPPPPSTTAGL---------YVAAPPPAGYPTKDG-DHGYAQNAPVE 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          T+SRGDGFWKGCCA LCCC  LD  F
Sbjct: 61 TKSRGDGFWKGCCAGLCCCCALDACF 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K5N8_CUCSA7.7e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237300 PE=4 SV=1[more]
A0A0S3SKA6_PHAAN3.7e-1650.56Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G220400 PE=... [more]
V7BXH8_PHAVU8.3e-1652.22Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057200g PE=4 SV=1[more]
V7BW57_PHAVU4.1e-1561.43Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057400g PE=4 SV=1[more]
A0A0B2QZ76_GLYSO5.4e-1550.56Uncharacterized protein OS=Glycine soja GN=glysoja_011417 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G32210.16.9e-1448.84 unknown protein[more]
AT2G32190.13.4e-1346.51 unknown protein[more]
AT3G22240.15.9e-1352.38 unknown protein[more]
AT1G56060.12.3e-0954.55 unknown protein[more]
AT1G05340.13.0e-0937.21 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778725970|ref|XP_011659032.1|1.1e-45100.00PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc... [more]
gi|659092574|ref|XP_008447127.1|1.6e-4497.67PREDICTED: CYSTM1 family protein A-like [Cucumis melo][more]
gi|965606090|dbj|BAT93266.1|5.3e-1650.56hypothetical protein VIGAN_07220400 [Vigna angularis var. angularis][more]
gi|950973095|ref|XP_014500656.1|5.3e-1650.56PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Vig... [more]
gi|568855524|ref|XP_006481354.1|7.0e-1652.33PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like isof... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR028144CYSTM_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G10700.1CSPI07G10700.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028144Cysteine-rich transmembrane CYSTM domainPFAMPF12734CYSTMcoord: 38..86
score: 9.4
NoneNo IPR availablePANTHERPTHR31568FAMILY NOT NAMEDcoord: 1..86
score: 3.2
NoneNo IPR availablePANTHERPTHR31568:SF17EXPRESSED PROTEINcoord: 1..86
score: 3.2

The following gene(s) are paralogous to this gene:

None