MELO3C012630 (gene) Melon (DHL92) v3.5.1

NameMELO3C012630
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein with domains of unknown function (DUF26 and DUF1204)
Locationchr1 : 20500436 .. 20501302 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTACTCACATTACTCCATTTCCATCATAATTATATCTTTGCGATTCACACCTCCATCCTACGATCTTGATTATTTCCGGCGTTTCCTTGTTGATTTTCCGTCATGAGCCAATATCGCAACCAAGAAATTGACAGTAAGTGTATAGTTAGATTTAAAATCATTAGAGTTTTTTTTTTTCTTTCCTTTTTTGGGTAGTTTTGTACCGGCGTCGTTTTTATAAATTGAAATCGGTTTGTCTTGTGGATGCAGTGGGTTATCCGGCGCCACCACCGTCGTATGCGGCGGGGGAGCAAGCGAAAGAGGGGAAGTCGGGGCCTTATGTTGCAGCTCCGCCTCCGGTTGGATATCCGGTGAGAGACGGGCCACAGTACCCTCACCAAACAAATTTGGACGCCCAAACTCAATCTCGAGGAGATGGGTTCTGGAAAGGATGGTTAGTCGTTTCTTAAATTCTAAACAACGAAGTAAATATTGTTAAGTTGATTGTTAGGGTAATCAAAGTAACGTGGAATTTGATTGATGTGTGTGTGTTTTTGTAGCTGTGCTGCATTGTGTTGCTGCTGGGTATTGGATTGCATCTTCTGATCAGGATGCTGAGTTAGGTACCACTTGTAGGCGGTTGGTTTTGGTTGAGATGAGACCCGGTTTTTTCAGTTTTAATTAGTTTAGTTTTGCTCTATTTGTTATTCTTTTATTATGTATTGTATATTATTATTTTTATGTTGTTTATGTGTATCGCCCCTCTTGTCTTTTTGGGCCTTTGTATTTTCATCTTTATTCCATTCTCATTCTTTTTTTTTATCAATAAATACATATTTTCTTATCTAATACTATTCTCTTTTCAACC

mRNA sequence

CATTACTCACATTACTCCATTTCCATCATAATTATATCTTTGCGATTCACACCTCCATCCTACGATCTTGATTATTTCCGGCGTTTCCTTGTTGATTTTCCGTCATGAGCCAATATCGCAACCAAGAAATTGACATGGGTTATCCGGCGCCACCACCGTCGTATGCGGCGGGGGAGCAAGCGAAAGAGGGGAAGTCGGGGCCTTATGTTGCAGCTCCGCCTCCGGTTGGATATCCGGTGAGAGACGGGCCACAGTACCCTCACCAAACAAATTTGGACGCCCAAACTCAATCTCGAGGAGATGGGTTCTGGAAAGGATGCTGTGCTGCATTGTGTTGCTGCTGGGTATTGGATTGCATCTTCTGATCAGGATGCTGAGTTAGGTACCACTTGTAGGCGGTTGGTTTTGGTTGAGATGAGACCCGGTTTTTTCAGTTTTAATTAGTTTAGTTTTGCTCTATTTGTTATTCTTTTATTATGTATTGTATATTATTATTTTTATGTTGTTTATGTGTATCGCCCCTCTTGTCTTTTTGGGCCTTTGTATTTTCATCTTTATTCCATTCTCATTCTTTTTTTTTATCAATAAATACATATTTTCTTATCTAATACTATTCTCTTTTCAACC

Coding sequence (CDS)

ATGAGCCAATATCGCAACCAAGAAATTGACATGGGTTATCCGGCGCCACCACCGTCGTATGCGGCGGGGGAGCAAGCGAAAGAGGGGAAGTCGGGGCCTTATGTTGCAGCTCCGCCTCCGGTTGGATATCCGGTGAGAGACGGGCCACAGTACCCTCACCAAACAAATTTGGACGCCCAAACTCAATCTCGAGGAGATGGGTTCTGGAAAGGATGCTGTGCTGCATTGTGTTGCTGCTGGGTATTGGATTGCATCTTCTGA

Protein sequence

MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQTQSRGDGFWKGCCAALCCCWVLDCIF*
BLAST of MELO3C012630 vs. TrEMBL
Match: A0A0A0K5N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237300 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-46
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60
          MSQYRNQEI MGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTN DAQ
Sbjct: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          TQSRGDGFWKGCCAALCCCWVLDCIF
Sbjct: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 86

BLAST of MELO3C012630 vs. TrEMBL
Match: A0A0S3SKA6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G220400 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.2e-18
Identity = 45/89 (50.56%), Postives = 55/89 (61.80%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNL 60
          M+ Y  QE  + YP    +Y+         S PYV APPP+GYP +D P    YP Q  +
Sbjct: 1  MNHYNQQEAPVSYPPKVQAYS---------SAPYVTAPPPMGYPSKDQPAAVGYPQQ-RV 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T +RGDGFWKGCCAALCCCW+LDC F
Sbjct: 61 PEETTTRGDGFWKGCCAALCCCWILDCCF 79

BLAST of MELO3C012630 vs. TrEMBL
Match: V7BXH8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057200g PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-17
Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 1

Query: 1  MSQYRNQ-EIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTN 60
          M+ + NQ E  + YPA   +Y+         S PYV+APPP+GYP +D P    YP Q  
Sbjct: 1  MNHFNNQQEAPVSYPAQVQAYS---------SAPYVSAPPPMGYPSKDEPATVGYPPQ-R 60

Query: 61 LDAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
          +  +T+S+GDGFWKGCCAALCCCWVLDC F
Sbjct: 61 VPEETRSKGDGFWKGCCAALCCCWVLDCCF 80

BLAST of MELO3C012630 vs. TrEMBL
Match: V7BW57_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057400g PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.8e-17
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 1

Query: 17 PPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQTQSRGDGFWKGCCAAL 76
          P SYA   Q +   S PYV APPP+GYP +DG     Q  +  +T SRGDGFWKGCCAAL
Sbjct: 11 PVSYAP--QGQVYSSTPYVTAPPPMGYPSKDGSVGYPQQRVPEETTSRGDGFWKGCCAAL 70

Query: 77 CCCWVLDCIF 87
          CCCWVLDC F
Sbjct: 71 CCCWVLDCCF 78

BLAST of MELO3C012630 vs. TrEMBL
Match: I1KU37_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G171400 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-16
Identity = 47/89 (52.81%), Postives = 55/89 (61.80%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNL 60
          MS++ NQ+      AP  SY            PYV+APPP+GYP +D P    YP Q  +
Sbjct: 1  MSRFNNQQ-----EAPAVSYPPA---------PYVSAPPPMGYPSKDDPTAVGYPQQ-RV 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T SRGDGFWKGCCAALCCCWVLDC F
Sbjct: 61 PEETTSRGDGFWKGCCAALCCCWVLDCCF 74

BLAST of MELO3C012630 vs. TAIR10
Match: AT2G32210.1 (AT2G32210.1 unknown protein)

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-15
Identity = 41/86 (47.67%), Postives = 46/86 (53.49%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60
          MSQY   +    YP PP S           +GPYVA PPP+GYP  D     H T    +
Sbjct: 1  MSQYSQNQSSGAYPTPPVS-----------TGPYVA-PPPLGYPTNDTS---HATVATVE 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          T+S+GDGF KGC AA+CCC VLD  F
Sbjct: 61 TKSKGDGFLKGCLAAMCCCCVLDACF 71

BLAST of MELO3C012630 vs. TAIR10
Match: AT3G22240.1 (AT3G22240.1 unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-14
Identity = 33/63 (52.38%), Postives = 39/63 (61.90%), Query Frame = 1

Query: 24 EQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQTQSRGDGFWKGCCAALCCCWVLD 83
          E+  +  SGPY + PPP+GYP RD            +T+S+GDGFWKGCCAA+CCC VLD
Sbjct: 12 EKPSQTSSGPYTS-PPPIGYPTRDA-MVGDPPAAAVETKSKGDGFWKGCCAAICCCCVLD 71

Query: 84 CIF 87
            F
Sbjct: 72 ACF 72

BLAST of MELO3C012630 vs. TAIR10
Match: AT2G32190.1 (AT2G32190.1 unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-14
Identity = 39/86 (45.35%), Postives = 45/86 (52.33%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60
          MSQY   +    YP PP S           +GPY+  PPP+GYP  D     H T    +
Sbjct: 1  MSQYSQNQSSGAYPTPPVS-----------TGPYMT-PPPLGYPTSD---ISHATVAPVE 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          T+S+GDGF KGC AA+CCC VLD  F
Sbjct: 61 TKSKGDGFLKGCLAAMCCCCVLDACF 71

BLAST of MELO3C012630 vs. TAIR10
Match: AT1G56060.1 (AT1G56060.1 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-10
Identity = 32/59 (54.24%), Postives = 37/59 (62.71%), Query Frame = 1

Query: 34 YVAAPPPVGYPV--RDGPQY---PHQTNLDAQTQSRGDG-FWKGCCAALCCCWVLDCIF 87
          YV APPP+GYPV  +D PQ    PH+       QS+G G F +GC AA+CCC VLDC+F
Sbjct: 19 YVTAPPPMGYPVMMKDSPQTVQPPHEG------QSKGSGGFLRGCLAAMCCCCVLDCVF 71

BLAST of MELO3C012630 vs. TAIR10
Match: AT1G05340.1 (AT1G05340.1 unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 3.6e-10
Identity = 32/86 (37.21%), Postives = 40/86 (46.51%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60
          MSQY + +     P PP S                + PPP+GYP    P +        +
Sbjct: 1  MSQYDHNQSAGANPPPPMSTCT-------------SPPPPIGYPTNQ-PSHGSVAQGKVE 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          T+S+GDGF+KGC AA+CCC  LD  F
Sbjct: 61 TKSKGDGFFKGCLAAMCCCCALDICF 72

BLAST of MELO3C012630 vs. NCBI nr
Match: gi|659092574|ref|XP_008447127.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-47
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60
          MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ
Sbjct: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          TQSRGDGFWKGCCAALCCCWVLDCIF
Sbjct: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 86

BLAST of MELO3C012630 vs. NCBI nr
Match: gi|778725970|ref|XP_011659032.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-46
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNLDAQ 60
          MSQYRNQEI MGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTN DAQ
Sbjct: 1  MSQYRNQEISMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQYPHQTNFDAQ 60

Query: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 87
          TQSRGDGFWKGCCAALCCCWVLDCIF
Sbjct: 61 TQSRGDGFWKGCCAALCCCWVLDCIF 86

BLAST of MELO3C012630 vs. NCBI nr
Match: gi|965606090|dbj|BAT93266.1| (hypothetical protein VIGAN_07220400 [Vigna angularis var. angularis])

HSP 1 Score: 98.2 bits (243), Expect = 7.5e-18
Identity = 45/89 (50.56%), Postives = 55/89 (61.80%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNL 60
          M+ Y  QE  + YP    +Y+         S PYV APPP+GYP +D P    YP Q  +
Sbjct: 1  MNHYNQQEAPVSYPPKVQAYS---------SAPYVTAPPPMGYPSKDQPAAVGYPQQ-RV 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T +RGDGFWKGCCAALCCCW+LDC F
Sbjct: 61 PEETTTRGDGFWKGCCAALCCCWILDCCF 79

BLAST of MELO3C012630 vs. NCBI nr
Match: gi|950973095|ref|XP_014500656.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Vigna radiata var. radiata])

HSP 1 Score: 98.2 bits (243), Expect = 7.5e-18
Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 1

Query: 1  MSQYRNQEIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTNL 60
          M+ +  QE  + YPA   +Y+         S PYV+APPP+GYP +D P    YP +  +
Sbjct: 1  MNHFNQQEAPVSYPAQVQAYS---------SAPYVSAPPPMGYPSKDEPAAVGYPQR--V 60

Query: 61 DAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
            +T SRGDGFWKGCCAALCCCW+LDC F
Sbjct: 61 PEETTSRGDGFWKGCCAALCCCWILDCCF 78

BLAST of MELO3C012630 vs. NCBI nr
Match: gi|593697618|ref|XP_007149282.1| (hypothetical protein PHAVU_005G057200g [Phaseolus vulgaris])

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17
Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 1

Query: 1  MSQYRNQ-EIDMGYPAPPPSYAAGEQAKEGKSGPYVAAPPPVGYPVRDGPQ---YPHQTN 60
          M+ + NQ E  + YPA   +Y+         S PYV+APPP+GYP +D P    YP Q  
Sbjct: 1  MNHFNNQQEAPVSYPAQVQAYS---------SAPYVSAPPPMGYPSKDEPATVGYPPQ-R 60

Query: 61 LDAQTQSRGDGFWKGCCAALCCCWVLDCIF 87
          +  +T+S+GDGFWKGCCAALCCCWVLDC F
Sbjct: 61 VPEETRSKGDGFWKGCCAALCCCWVLDCCF 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K5N8_CUCSA1.6e-4697.67Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237300 PE=4 SV=1[more]
A0A0S3SKA6_PHAAN5.2e-1850.56Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G220400 PE=... [more]
V7BXH8_PHAVU1.2e-1752.22Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057200g PE=4 SV=1[more]
V7BW57_PHAVU5.8e-1761.43Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G057400g PE=4 SV=1[more]
I1KU37_SOYBN1.3e-1652.81Uncharacterized protein OS=Glycine max GN=GLYMA_08G171400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G32210.14.8e-1547.67 unknown protein[more]
AT3G22240.13.1e-1452.38 unknown protein[more]
AT2G32190.13.1e-1445.35 unknown protein[more]
AT1G56060.12.7e-1054.24 unknown protein[more]
AT1G05340.13.6e-1037.21 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659092574|ref|XP_008447127.1|1.5e-47100.00PREDICTED: CYSTM1 family protein A-like [Cucumis melo][more]
gi|778725970|ref|XP_011659032.1|2.2e-4697.67PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc... [more]
gi|965606090|dbj|BAT93266.1|7.5e-1850.56hypothetical protein VIGAN_07220400 [Vigna angularis var. angularis][more]
gi|950973095|ref|XP_014500656.1|7.5e-1850.56PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Vig... [more]
gi|593697618|ref|XP_007149282.1|1.7e-1752.22hypothetical protein PHAVU_005G057200g [Phaseolus vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR028144CYSTM_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47029melon EST collection version 4.0transcribed_cluster
MU61997melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012630T1MELO3C012630T1mRNA
MELO3C012630T2MELO3C012630T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU61997MU61997transcribed_cluster
MU47029MU47029transcribed_cluster


The following gene(s) are paralogous to this gene:

None