CSPI07G09320 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G09320
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 7278155 .. 7278361 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGATCATCAACCCTGGTTGGAACCCGAATATACTCGTGTACCGAAGTCCGTCAATGCACATCATAGTAGATTCATGACAGGAATGCTCGACAGTATGTCAAACCAGAATGTCTATTGGCCGAGAAATTTGAGGTCTAATTTTGGTGAGAAAACTGTGAGATCAGATGCAAGAACCATTCCACGATTATTCCACTATCTGTAA

mRNA sequence

ATGCAGGATCATCAACCCTGGTTGGAACCCGAATATACTCGTGTACCGAAGTCCGTCAATGCACATCATAGTAGATTCATGACAGGAATGCTCGACAGTATGTCAAACCAGAATGTCTATTGGCCGAGAAATTTGAGGTCTAATTTTGGTGAGAAAACTGTGAGATCAGATGCAAGAACCATTCCACGATTATTCCACTATCTGTAA

Coding sequence (CDS)

ATGCAGGATCATCAACCCTGGTTGGAACCCGAATATACTCGTGTACCGAAGTCCGTCAATGCACATCATAGTAGATTCATGACAGGAATGCTCGACAGTATGTCAAACCAGAATGTCTATTGGCCGAGAAATTTGAGGTCTAATTTTGGTGAGAAAACTGTGAGATCAGATGCAAGAACCATTCCACGATTATTCCACTATCTGTAA
Homology
[Close]
BLAST of CSPI07G09320 vs. TrEMBL
Match: A0A0A0K599_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G193740 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.5e-33
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MQDHQPWLEPEYTRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60
          MQDHQPWLEPEY+RVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART
Sbjct: 1  MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60

Query: 61 IPRLFHYL 69
          IPRLFHYL
Sbjct: 61 IPRLFHYL 68

[Close]
BLAST of CSPI07G09320 vs. NCBI nr
Match: gi|700188881|gb|KGN44114.1| (hypothetical protein Csa_7G193740 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 5.0e-33
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MQDHQPWLEPEYTRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60
          MQDHQPWLEPEY+RVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART
Sbjct: 1  MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60

Query: 61 IPRLFHYL 69
          IPRLFHYL
Sbjct: 61 IPRLFHYL 68

[Close]
BLAST of CSPI07G09320 vs. NCBI nr
Match: gi|659094509|ref|XP_008448099.1| (PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo])

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-24
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1 

Query: 1   MQDHQPWLEPEYTRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60
           MQDHQPWLEPEY+RVP+SVNAH+ RFMTGML+SMSN+NVYW  NLRSNFGE+TVRSDART
Sbjct: 280 MQDHQPWLEPEYSRVPQSVNAHN-RFMTGMLESMSNKNVYWSSNLRSNFGEETVRSDART 339

Query: 61  IPRLFHYL 69
           I R F YL
Sbjct: 340 IRRSFQYL 346

The following BLAST results are available for this feature:
BLAST of CSPI07G09320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G09320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K599_CUCSA3.5e-3398.53Uncharacterized protein OS=Cucumis sativus GN=Csa_7G193740 PE=4 SV=1[more]
BLAST of CSPI07G09320 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G09320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188881|gb|KGN44114.1|5.0e-3398.53hypothetical protein Csa_7G193740 [Cucumis sativus][more]
gi|659094509|ref|XP_008448099.1|3.2e-2482.35PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G09320.1CSPI07G09320.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G09320Csa7G193740Cucumber (Chinese Long) v2cpicuB354
CSPI07G09320Lsi02G017960Bottle gourd (USVL1VR-Ls)cpilsiB518
CSPI07G09320CsaV3_7G021440Cucumber (Chinese Long) v3cpicucB414
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G09320Cucurbita pepo (Zucchini)cpecpiB594
CSPI07G09320Cucurbita pepo (Zucchini)cpecpiB802
CSPI07G09320Melon (DHL92) v3.6.1cpimedB527
CSPI07G09320Cucumber (Gy14) v2cgybcpiB331
CSPI07G09320Silver-seed gourdcarcpiB0088
CSPI07G09320Silver-seed gourdcarcpiB0469
CSPI07G09320Watermelon (97103) v2cpiwmbB599
CSPI07G09320Wax gourdcpiwgoB722
CSPI07G09320Cucumber (Gy14) v1cgycpiB498
CSPI07G09320Cucurbita maxima (Rimu)cmacpiB046
CSPI07G09320Cucurbita maxima (Rimu)cmacpiB495
CSPI07G09320Cucurbita moschata (Rifu)cmocpiB036
CSPI07G09320Cucurbita moschata (Rifu)cmocpiB485
CSPI07G09320Melon (DHL92) v3.5.1cpimeB542
CSPI07G09320Watermelon (Charleston Gray)cpiwcgB556
CSPI07G09320Watermelon (97103) v1cpiwmB588