Csa7G193740 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G193740
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 6991018 .. 6991224 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGATCATCAACCCTGGTTGGAACCCGAATATTCTCGTGTACCGAAGTCCGTCAATGCACATCATAGTAGATTCATGACAGGAATGCTCGACAGTATGTCAAACCAGAATGTCTATTGGCCGAGAAATTTGAGGTCTAATTTTGGTGAGAAAACTGTGAGATCAGATGCAAGAACCATTCCACGATTATTCCACTATCTGTAA

mRNA sequence

ATGCAGGATCATCAACCCTGGTTGGAACCCGAATATTCTCGTGTACCGAAGTCCGTCAATGCACATCATAGTAGATTCATGACAGGAATGCTCGACAGTATGTCAAACCAGAATGTCTATTGGCCGAGAAATTTGAGGTCTAATTTTGGTGAGAAAACTGTGAGATCAGATGCAAGAACCATTCCACGATTATTCCACTATCTGTAA

Coding sequence (CDS)

ATGCAGGATCATCAACCCTGGTTGGAACCCGAATATTCTCGTGTACCGAAGTCCGTCAATGCACATCATAGTAGATTCATGACAGGAATGCTCGACAGTATGTCAAACCAGAATGTCTATTGGCCGAGAAATTTGAGGTCTAATTTTGGTGAGAAAACTGTGAGATCAGATGCAAGAACCATTCCACGATTATTCCACTATCTGTAA

Protein sequence

MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDARTIPRLFHYL*
Homology
[Close]
BLAST of Csa7G193740 vs. TrEMBL
Match: A0A0A0K599_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G193740 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60
          MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART
Sbjct: 1  MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60

Query: 61 IPRLFHYL 69
          IPRLFHYL
Sbjct: 61 IPRLFHYL 68

[Close]
BLAST of Csa7G193740 vs. NCBI nr
Match: gi|700188881|gb|KGN44114.1| (hypothetical protein Csa_7G193740 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60
          MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART
Sbjct: 1  MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60

Query: 61 IPRLFHYL 69
          IPRLFHYL
Sbjct: 61 IPRLFHYL 68

[Close]
BLAST of Csa7G193740 vs. NCBI nr
Match: gi|659094509|ref|XP_008448099.1| (PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 2.5e-24
Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 1 

Query: 1   MQDHQPWLEPEYSRVPKSVNAHHSRFMTGMLDSMSNQNVYWPRNLRSNFGEKTVRSDART 60
           MQDHQPWLEPEYSRVP+SVNAH+ RFMTGML+SMSN+NVYW  NLRSNFGE+TVRSDART
Sbjct: 280 MQDHQPWLEPEYSRVPQSVNAHN-RFMTGMLESMSNKNVYWSSNLRSNFGEETVRSDART 339

Query: 61  IPRLFHYL 69
           I R F YL
Sbjct: 340 IRRSFQYL 346

The following BLAST results are available for this feature:
BLAST of Csa7G193740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K599_CUCSA2.7e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G193740 PE=4 SV=1[more]
BLAST of Csa7G193740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188881|gb|KGN44114.1|3.8e-33100.00hypothetical protein Csa_7G193740 [Cucumis sativus][more]
gi|659094509|ref|XP_008448099.1|2.5e-2483.82PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G193740.1Csa7G193740.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G193740Lsi02G017960Bottle gourd (USVL1VR-Ls)culsiB504
Csa7G193740CSPI07G09320Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G193740Cucumber (Gy14) v1cgycuB472
Csa7G193740Cucurbita maxima (Rimu)cmacuB044
Csa7G193740Cucurbita maxima (Rimu)cmacuB491
Csa7G193740Cucurbita moschata (Rifu)cmocuB033
Csa7G193740Cucurbita moschata (Rifu)cmocuB479
Csa7G193740Melon (DHL92) v3.5.1cumeB534
Csa7G193740Watermelon (Charleston Gray)cuwcgB527
Csa7G193740Watermelon (97103) v1cuwmB569
Csa7G193740Cucurbita pepo (Zucchini)cpecuB593
Csa7G193740Cucurbita pepo (Zucchini)cpecuB802
Csa7G193740Cucumber (Gy14) v2cgybcuB323
Csa7G193740Melon (DHL92) v3.6.1cumedB513
Csa7G193740Silver-seed gourdcarcuB0084
Csa7G193740Silver-seed gourdcarcuB0464
Csa7G193740Watermelon (97103) v2cuwmbB573
Csa7G193740Wax gourdcuwgoB709