CSPI06G30940 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATAAGCTCGCCTGAACTTCCATCTCGTCAAGCGATTAGTTTTGCCACTGCACCTGATCGGAATCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACTGGGTTAGTAGACTCCATTTTGTTGATTATTTTGGTCAATGTTTATGTTTTTTTTTAAAAAAAATTTATATAAATATTTAAACCAACTATTAAATAAAAATATGTTTTAGTTTTCAAAACAAAAGAAACAGACAACAAAATATGAAAATCTTGAAAACAAAATGATTGTCAGAATGGGACTTTATTTTTTGTTTTGTTTCTTTCATATGAAATGGGTTAATGTGTGAAAACAGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACATGAATAAAAAACCAGTCAATCAACATGGTAATTAAACACATACACATCCTTAAAAGGAAAAAGTAAATGTGTGCATGATTTAATAGTTAAATGATTTTAATTGGTATATTGTTGTTTTGATGGTGTGATTGAAGAATATGATAAAAGCCAGGGGAGCGAAGTGAAAGAGAAGGAGAAGTCACGCCATCAAGCTCATGCAAATTGA ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATAAGCTCGCCTGAACTTCCATCTCGTCAAGCGATTAGTTTTGCCACTGCACCTGATCGGAATCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACTGGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACATGAATAAAAAACCAGTCAATCAACATGAATATGATAAAAGCCAGGGGAGCGAAGTGAAAGAGAAGGAGAAGTCACGCCATCAAGCTCATGCAAATTGA ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATAAGCTCGCCTGAACTTCCATCTCGTCAAGCGATTAGTTTTGCCACTGCACCTGATCGGAATCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACTGGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACATGAATAAAAAACCAGTCAATCAACATGAATATGATAAAAGCCAGGGGAGCGAAGTGAAAGAGAAGGAGAAGTCACGCCATCAAGCTCATGCAAATTGA
BLAST of CSPI06G30940 vs. TrEMBL
Match: A0A0A0KGG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502630 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 3.2e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1
BLAST of CSPI06G30940 vs. TrEMBL
Match: V7CFG3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G029900g PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.6e-16 Identity = 65/134 (48.51%), Postives = 82/134 (61.19%), Query Frame = 1
BLAST of CSPI06G30940 vs. TrEMBL
Match: A0A067GIH8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046060mg PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.7e-16 Identity = 61/133 (45.86%), Postives = 77/133 (57.89%), Query Frame = 1
BLAST of CSPI06G30940 vs. TrEMBL
Match: V4SJ98_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026748mg PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.7e-16 Identity = 61/133 (45.86%), Postives = 77/133 (57.89%), Query Frame = 1
BLAST of CSPI06G30940 vs. TrEMBL
Match: A0A087GEQ9_ARAAL (Late embryogenesis abundant protein OS=Arabis alpina GN=AALP_AA8G505600 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.7e-15 Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 1
BLAST of CSPI06G30940 vs. TAIR10
Match: AT5G66780.1 (AT5G66780.1 unknown protein) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14 Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
BLAST of CSPI06G30940 vs. NCBI nr
Match: gi|778722467|ref|XP_011658492.1| (PREDICTED: uncharacterized protein LOC101219972 [Cucumis sativus]) HSP 1 Score: 262.3 bits (669), Expect = 4.6e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1
BLAST of CSPI06G30940 vs. NCBI nr
Match: gi|659081048|ref|XP_008441122.1| (PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo]) HSP 1 Score: 214.5 bits (545), Expect = 1.1e-52 Identity = 113/133 (84.96%), Postives = 119/133 (89.47%), Query Frame = 1
BLAST of CSPI06G30940 vs. NCBI nr
Match: gi|593787798|ref|XP_007156938.1| (hypothetical protein PHAVU_002G029900g [Phaseolus vulgaris]) HSP 1 Score: 93.2 bits (230), Expect = 3.7e-16 Identity = 65/134 (48.51%), Postives = 82/134 (61.19%), Query Frame = 1
BLAST of CSPI06G30940 vs. NCBI nr
Match: gi|658033897|ref|XP_008352469.1| (PREDICTED: uncharacterized protein LOC103415969 [Malus domestica]) HSP 1 Score: 91.3 bits (225), Expect = 1.4e-15 Identity = 64/134 (47.76%), Postives = 82/134 (61.19%), Query Frame = 1
BLAST of CSPI06G30940 vs. NCBI nr
Match: gi|567866125|ref|XP_006425685.1| (hypothetical protein CICLE_v10026748mg [Citrus clementina]) HSP 1 Score: 91.3 bits (225), Expect = 1.4e-15 Identity = 61/133 (45.86%), Postives = 77/133 (57.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |