CsaV3_6G046200 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCCAAAAGCAAATATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATAAGCTCGCCTGAACTTCCATCCCGTCAAGCGATTAGTTTTGCCACTGCACCTGATCGGAATCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACTGGGTTAGTAGACTCCATTTTGTTGATTATTTTGGTTAATGTTTATGTTTTTTTTTTTTAATTTATATAAATATTTAAACCAACTATTAAATAAAAATATGTTTTAGTTTTCAAAACAAAAGAAACAGACAACAAAATATGAAAATCTTGAAAACAAAATGATTGTCAGAATGGGACTTTATTTTTTGTTTTGTTTCTTTCATATGAAATGGGTTAATGTGTGAAAACAGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACATGAATAAAAAACCAGTCAATCAACATGGTAATTAAACACATACACATCCTTAAAAGGAAAAAGTAAATGTGTGCATGATTTAATAGTTAAATGATTTTAATTGGTATATTGTTGTTTTGATGGTGTGATTGAAGAATATGATAAAAGCCAGGGGAGCGAAGTGAAAGAGAAGGAGAAGTCACGCCATCAAGCTCATGCAAATTGAACTGCTCTACAATATATTGCTGTTTGTTGGGTTGGTAGCTCAATGTCGTCGAGTGTTTGGTTTCTCATCTTTTTGTTGGATATATCGTTTTCTGGGAATTTAGGTTCGTTATTTGTCACTATTTAGTTCACGTGGTAACTAAAGATGGTCTCACTTTCACCTGTTGTATATTATTGGGTATTTTCTTCATATAGTGAGGATGTATCCTTTTCATGGTAATTTTGACATTTGCATCATATGAATATATGAGAAACAACGTTCAATCACAATAATAAATGAAATGATCGATAGTTGAATAGCGCGCTATAGATCTGTAGGATGTTTCTTCTCATTCTCTCTAAAGATGATGCCTTAAAAGTCGG ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATAAGCTCGCCTGAACTTCCATCCCGTCAAGCGATTAGTTTTGCCACTGCACCTGATCGGAATCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACTGGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACATGAATAAAAAACCAGTCAATCAACATGAATATGATAAAAGCCAGGGGAGCGAAGTGAAAGAGAAGGAGAAGTCACGCCATCAAGCTCATGCAAATTGA ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATAAGCTCGCCTGAACTTCCATCCCGTCAAGCGATTAGTTTTGCCACTGCACCTGATCGGAATCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACTGGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACATGAATAAAAAACCAGTCAATCAACATGAATATGATAAAAGCCAGGGGAGCGAAGTGAAAGAGAAGGAGAAGTCACGCCATCAAGCTCATGCAAATTGA MINAIRFGRTPPPIVLTSPLPPKLRRISSPELPSRQAISFATAPDRNPKCEEMDDSQNKTKETGDIMCDSFGEGYATRSEEEGFGGTYGGKYQSIDDDEHMNKKPVNQHEYDKSQGSEVKEKEKSRHQAHAN
BLAST of CsaV3_6G046200 vs. NCBI nr
Match: XP_011658492.1 (PREDICTED: uncharacterized protein LOC101219972 [Cucumis sativus] >KGN48825.1 hypothetical protein Csa_6G502630 [Cucumis sativus]) HSP 1 Score: 262.3 bits (669), Expect = 8.9e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. NCBI nr
Match: XP_008441122.1 (PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo]) HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46 Identity = 106/133 (79.70%), Postives = 111/133 (83.46%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. NCBI nr
Match: XP_023543425.1 (uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156.4 bits (394), Expect = 6.9e-35 Identity = 88/132 (66.67%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. NCBI nr
Match: XP_023543426.1 (uncharacterized protein LOC111803316 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33 Identity = 86/132 (65.15%), Postives = 100/132 (75.76%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. NCBI nr
Match: XP_022950398.1 (uncharacterized protein LOC111453509 [Cucurbita moschata]) HSP 1 Score: 147.9 bits (372), Expect = 2.4e-32 Identity = 85/132 (64.39%), Postives = 98/132 (74.24%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. TAIR10
Match: AT5G66780.1 (unknown protein) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-14 Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. TrEMBL
Match: tr|A0A0A0KGG3|A0A0A0KGG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502630 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 5.9e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. TrEMBL
Match: tr|A0A1S3B3C5|A0A1S3B3C5_CUCME (uncharacterized protein LOC103485350 OS=Cucumis melo OX=3656 GN=LOC103485350 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 6.8e-47 Identity = 106/133 (79.70%), Postives = 111/133 (83.46%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. TrEMBL
Match: tr|A0A2P4JK90|A0A2P4JK90_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_30394 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 6.6e-18 Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. TrEMBL
Match: tr|V7CFG3|V7CFG3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G029900g PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.7e-16 Identity = 65/134 (48.51%), Postives = 82/134 (61.19%), Query Frame = 0
BLAST of CsaV3_6G046200 vs. TrEMBL
Match: tr|A0A2H5NSJ8|A0A2H5NSJ8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_069010 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15 Identity = 62/133 (46.62%), Postives = 77/133 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |