CSPI06G18940 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G18940
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionEthylene-responsive transcription factor ERF018
LocationChr6 : 17162771 .. 17163421 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAATAATATTTCCCAAACTTCCGCCGCCGGTGACACCAAATACAGAGGTGTTCGGCGGCGTAAATGGGGGAAATGGGTTGCGGAAATCCGTCTCCCAAACAGCCGAGACCGTATATGGCTCGGTTCTTACGACTCACCAGAGAAAGCTGCTCGAGCTTTTGATGCTGCTCTTTTCTGCCTGCGTGGTCCTCATGCCAAGTTTAACTTCCCTGACCAACCACTGCCTGACATTCTTAATGCTCATTCACTCACTGCCCATCAGATTCAAGAGTTTGCTGCTAAGTTCGCTAATGAGTATGAGTGTCACCAAAACGACGACGTCGTTGATGTAGCTCCTCCACCCACTACTACTACTACTACTACTGCTGAAGAAAAATGTGGAATTTCACCTTCCTCCTCTAATTATAACAATATGGATTGGTCATTCCTTGATGAAATTCACGATCATCACTACCCCAACCCCAACCCCCATTCTTCTTCCTCTTCTTCCAATTTCTTTCCTCTTTACAATGACCATTTTGATAATATCTTAACCAATGATTTTTATCAATCTTCCACCACCAACAACAACGACGACCTTTACGATGCTGTTTCTGGTGACGACGACGACACTTTCTCCAACCAACCCTTTCTTTGGAACTTTTAA

mRNA sequence

ATGAACAATAATATTTCCCAAACTTCCGCCGCCGGTGACACCAAATACAGAGGTGTTCGGCGGCGTAAATGGGGGAAATGGGTTGCGGAAATCCGTCTCCCAAACAGCCGAGACCGTATATGGCTCGGTTCTTACGACTCACCAGAGAAAGCTGCTCGAGCTTTTGATGCTGCTCTTTTCTGCCTGCGTGGTCCTCATGCCAAGTTTAACTTCCCTGACCAACCACTGCCTGACATTCTTAATGCTCATTCACTCACTGCCCATCAGATTCAAGAGTTTGCTGCTAAGTTCGCTAATGAGTATGAGTGTCACCAAAACGACGACGTCGTTGATGTAGCTCCTCCACCCACTACTACTACTACTACTACTGCTGAAGAAAAATGTGGAATTTCACCTTCCTCCTCTAATTATAACAATATGGATTGGTCATTCCTTGATGAAATTCACGATCATCACTACCCCAACCCCAACCCCCATTCTTCTTCCTCTTCTTCCAATTTCTTTCCTCTTTACAATGACCATTTTGATAATATCTTAACCAATGATTTTTATCAATCTTCCACCACCAACAACAACGACGACCTTTACGATGCTGTTTCTGGTGACGACGACGACACTTTCTCCAACCAACCCTTTCTTTGGAACTTTTAA

Coding sequence (CDS)

ATGAACAATAATATTTCCCAAACTTCCGCCGCCGGTGACACCAAATACAGAGGTGTTCGGCGGCGTAAATGGGGGAAATGGGTTGCGGAAATCCGTCTCCCAAACAGCCGAGACCGTATATGGCTCGGTTCTTACGACTCACCAGAGAAAGCTGCTCGAGCTTTTGATGCTGCTCTTTTCTGCCTGCGTGGTCCTCATGCCAAGTTTAACTTCCCTGACCAACCACTGCCTGACATTCTTAATGCTCATTCACTCACTGCCCATCAGATTCAAGAGTTTGCTGCTAAGTTCGCTAATGAGTATGAGTGTCACCAAAACGACGACGTCGTTGATGTAGCTCCTCCACCCACTACTACTACTACTACTACTGCTGAAGAAAAATGTGGAATTTCACCTTCCTCCTCTAATTATAACAATATGGATTGGTCATTCCTTGATGAAATTCACGATCATCACTACCCCAACCCCAACCCCCATTCTTCTTCCTCTTCTTCCAATTTCTTTCCTCTTTACAATGACCATTTTGATAATATCTTAACCAATGATTTTTATCAATCTTCCACCACCAACAACAACGACGACCTTTACGATGCTGTTTCTGGTGACGACGACGACACTTTCTCCAACCAACCCTTTCTTTGGAACTTTTAA
Homology
[Close]
BLAST of CSPI06G18940 vs. Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-30
Identity = 72/146 (49.32%), Postives = 94/146 (64.38%), Query Frame = 1 

Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           M     + + A  +KY+GVR+RKWGKWV+EIRLP+SR+RIWLGSYD+PEKAARAFDAA F
Sbjct: 6   MKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQF 65

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTT 120
           CLRG  A FNFP+ P P I    SLT  +IQE AA+FAN ++     +      P +   
Sbjct: 66  CLRGGDANFNFPNNP-PSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPGSEIR 125

Query: 121 TTTAEEKCGISPSSSNYNNMDWSFLD 147
             +      ++ S+ +Y   D+SFLD
Sbjct: 126 PESPSTSASVATSTVDY---DFSFLD 147

[Close]
BLAST of CSPI06G18940 vs. Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 94/221 (42.53%), Postives = 119/221 (53.85%), Query Frame = 1 

Query: 15  KYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQ 74
           KY GVR+RKWGKWVAEIRLPNSRDRIWLGS+DS EKAARAFDAAL+CLRGP A+FNFPD 
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 75  PLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEEKCGISPSS 134
           P P+I    SLT  QIQ  A++FA E E    +       PP     T  EE+  IS   
Sbjct: 66  P-PEIPGGRSLTPQQIQVVASRFACEEELLPPEQ--HHPSPPRGDHNT--EEEVIISARG 125

Query: 135 SNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLY-----------NDHFDNILTNDF 194
              +      L ++ +    N N  +S+ +S+++PL            +DH     T+D 
Sbjct: 126 EINSGSGGPTLGQVGE---DNNNEGNSNDTSSYWPLIWEEENFVGPPNSDHEFGFFTDDS 185

Query: 195 --------YQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
                    Q     ++D  YD    DD   ++    LWNF
Sbjct: 186 TNLYFPTQQQQQHQLSSDFYYDGACEDDFSHYNIN--LWNF 216

[Close]
BLAST of CSPI06G18940 vs. Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-29
Identity = 89/210 (42.38%), Postives = 116/210 (55.24%), Query Frame = 1 

Query: 8   TSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHA 67
           +S++  +KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG +A
Sbjct: 4   SSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNA 63

Query: 68  KFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEEK 127
           KFNFPD P P I    +L+  +I+E AA+FAN  E    DD    A              
Sbjct: 64  KFNFPDNP-PVISGGRNLSRSEIREAAARFANSAE----DDSSGGAGYEIR--------- 123

Query: 128 CGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILTNDF-YQS 187
                S+S   ++D  FL  +     P     + +S    FP ++D  D    + F  Q 
Sbjct: 124 ---QESASTSMDVDSEFLSML-----PTVGSGNFASEFGLFPGFDDFSDEYSGDRFREQL 183

Query: 188 STTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
           S T +   L +    D         FLWNF
Sbjct: 184 SPTQDYYQLGEETYAD------GSMFLWNF 185

[Close]
BLAST of CSPI06G18940 vs. Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.1e-21
Identity = 54/110 (49.09%), Postives = 67/110 (60.91%), Query Frame = 1 

Query: 16  YRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQP 75
           YRGVR+R WGKWV+EIR+P +  RIWLGSYD+PEKAARA+DAALFC+RG    +NFP   
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 76  LPDIL--NAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTT 124
            P +   +   L+   IQ  A  +A+         VV V    TT   TT
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYAS--------SVVHVPSHATTLPATT 128

[Close]
BLAST of CSPI06G18940 vs. Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.8e-20
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1 

Query: 13 DTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFP 72
          D  Y+G+R RKWGKWVAEIR PN R RIWLGSY +PE AARA+D A+F LRGP A+ NFP
Sbjct: 27 DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFP 86

Query: 73 D 74
          +
Sbjct: 87 E 87

[Close]
BLAST of CSPI06G18940 vs. TrEMBL
Match: A0A0A0KIJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361330 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 2.8e-121
Identity = 213/216 (98.61%), Postives = 213/216 (98.61%), Query Frame = 1 

Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF
Sbjct: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTT 120
           CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPP   T
Sbjct: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPP---T 120

Query: 121 TTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILT 180
           TTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILT
Sbjct: 121 TTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILT 180

Query: 181 NDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
           NDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF
Sbjct: 181 NDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 213

[Close]
BLAST of CSPI06G18940 vs. TrEMBL
Match: A9PLA3_POPTR (RAP2-like protein OS=Populus trichocarpa GN=RAP2L13 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 9.6e-37
Identity = 98/212 (46.23%), Postives = 126/212 (59.43%), Query Frame = 1 

Query: 7   QTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPH 66
           Q+    + KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG  
Sbjct: 16  QSDRTHEPKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGSG 75

Query: 67  AKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEE 126
           AKFNFPD P PDI+   SLT  ++QE AA+FANE     +   +           T++  
Sbjct: 76  AKFNFPDNP-PDIVGGRSLTPQEVQEVAARFANEEP--TSSTAMGGESSSHVENYTSSSS 135

Query: 127 KCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYN--DHFDNILTNDFY 186
            CG     S  + +DWSFL           N   S+  ++ F LY+  DH    +  D+Y
Sbjct: 136 DCGAGQMDS--DTIDWSFL-----------NLLDSNEGASDFGLYHGLDH----MGGDYY 195

Query: 187 QSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
              T     D Y+    + D+TFS+Q FLWNF
Sbjct: 196 PPPTPPPPPD-YNGDDNNGDETFSHQSFLWNF 206

[Close]
BLAST of CSPI06G18940 vs. TrEMBL
Match: B9IKF6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s08320g PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-34
Identity = 97/221 (43.89%), Postives = 129/221 (58.37%), Query Frame = 1 

Query: 7   QTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPH 66
           Q+    + KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+P KAARAFDAAL+CLRG  
Sbjct: 11  QSDRNHEPKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPLKAARAFDAALYCLRGSG 70

Query: 67  AKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEE 126
           AKFNFPD P PDI+   SL++ +IQE AA+FANE              P +++T T  E 
Sbjct: 71  AKFNFPDNP-PDIVGGQSLSSQEIQEVAARFANE-------------EPTSSSTATRGES 130

Query: 127 KCGISPSSSNYNN------MDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYN--DHFDNI 186
              +   +S+ ++      +DWSFL           N   SS  ++ F LY+  DH    
Sbjct: 131 SEHVENDTSSSSDGGAGDTIDWSFL-----------NLLDSSEGASDFGLYHGLDH---- 190

Query: 187 LTNDFYQSSTTNNNDDLYDAVSGDD---DDTFSNQPFLWNF 217
           +  D+Y      +      ++ GDD   D+ +S Q FLWNF
Sbjct: 191 MGGDYYPPPPPPSE----YSIGGDDHNGDEAYSQQSFLWNF 198

[Close]
BLAST of CSPI06G18940 vs. TrEMBL
Match: A0A067KNY6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07576 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.4e-34
Identity = 96/219 (43.84%), Postives = 127/219 (57.99%), Query Frame = 1 

Query: 8   TSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHA 67
           +S   + KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG  A
Sbjct: 16  SSDRNEPKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGRGA 75

Query: 68  KFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTT------ 127
           KFNFPD P  +I    SL+  +IQ  A+++ANE             P P  TTT      
Sbjct: 76  KFNFPDNPPDNIDGGQSLSPQEIQAVASRYANE------------NPNPNATTTRMSRTG 135

Query: 128 TTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILTN 187
            ++ +      SSS  N +DWSFL+ +            S+   + F LY+   DN + N
Sbjct: 136 ESSSQAMDQYASSSEDNAIDWSFLNSL-----------GSNEGVSKFELYS-VLDN-MGN 195

Query: 188 DFYQSSTTNNNDDLYDAVSGDD----DDTFSNQPFLWNF 217
           +++        DD  D  +G+D    D+ +S Q FLWNF
Sbjct: 196 EYFPPPPPPPFDDGEDHNTGNDDHNGDEDYSQQSFLWNF 209

[Close]
BLAST of CSPI06G18940 vs. TrEMBL
Match: A0A140WWF1_LOTCO (AP2/ERF OS=Lotus corniculatus GN=SRF3 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 98/244 (40.16%), Postives = 134/244 (54.92%), Query Frame = 1 

Query: 5   ISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRG 64
           ++ +S+  +  YRGVR+RKWGKWV+EIRLPNSR+RIWLGSYDSPEKAARAFD AL+ LRG
Sbjct: 1   MASSSSDNNKLYRGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDCALYLLRG 60

Query: 65  PHAKFNFPDQPLPDILNA------HSLTAHQIQEFAAKFANEY----ECHQNDDVVDVA- 124
            HA FNFPD P    +N        SLT  +IQE AAKF N+Y    + H +    D+A 
Sbjct: 61  RHASFNFPDTPFNLDINVAAAAGNQSLTPQEIQEVAAKFGNQYQPQQQHHHHQQSSDIAN 120

Query: 125 --------------PPPTTTTTTTAEEKCG----ISPSSSNYNNMDWSFLDEIHDHHYPN 184
                            ++ +T T  E+CG    +  + S  N +DW+FL+ + +    N
Sbjct: 121 FESHIGRESNFTTTAASSSNSTITMHEQCGATMQVEENGSMMNTIDWTFLNVLDNE--SN 180

Query: 185 PNPHSSSSSSNFFPLYNDHFDNILTND--FYQSSTTNNNDDLYDAVSGDDDDTFSNQ-PF 217
            N +   +    + LY+   D + + D  FY +  T   +D         DD FSNQ  F
Sbjct: 181 TNDNGGINLGGEYGLYSSELDKMHSGDFQFYSAPPTTPYED------NIADDLFSNQSSF 236

[Close]
BLAST of CSPI06G18940 vs. TAIR10
Match: AT1G74930.1 (AT1G74930.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 72/146 (49.32%), Postives = 94/146 (64.38%), Query Frame = 1 

Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           M     + + A  +KY+GVR+RKWGKWV+EIRLP+SR+RIWLGSYD+PEKAARAFDAA F
Sbjct: 6   MKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQF 65

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTT 120
           CLRG  A FNFP+ P P I    SLT  +IQE AA+FAN ++     +      P +   
Sbjct: 66  CLRGGDANFNFPNNP-PSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPGSEIR 125

Query: 121 TTTAEEKCGISPSSSNYNNMDWSFLD 147
             +      ++ S+ +Y   D+SFLD
Sbjct: 126 PESPSTSASVATSTVDY---DFSFLD 147

[Close]
BLAST of CSPI06G18940 vs. TAIR10
Match: AT5G21960.1 (AT5G21960.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 94/221 (42.53%), Postives = 119/221 (53.85%), Query Frame = 1 

Query: 15  KYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQ 74
           KY GVR+RKWGKWVAEIRLPNSRDRIWLGS+DS EKAARAFDAAL+CLRGP A+FNFPD 
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 75  PLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEEKCGISPSS 134
           P P+I    SLT  QIQ  A++FA E E    +       PP     T  EE+  IS   
Sbjct: 66  P-PEIPGGRSLTPQQIQVVASRFACEEELLPPEQ--HHPSPPRGDHNT--EEEVIISARG 125

Query: 135 SNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLY-----------NDHFDNILTNDF 194
              +      L ++ +    N N  +S+ +S+++PL            +DH     T+D 
Sbjct: 126 EINSGSGGPTLGQVGE---DNNNEGNSNDTSSYWPLIWEEENFVGPPNSDHEFGFFTDDS 185

Query: 195 --------YQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
                    Q     ++D  YD    DD   ++    LWNF
Sbjct: 186 TNLYFPTQQQQQHQLSSDFYYDGACEDDFSHYNIN--LWNF 216

[Close]
BLAST of CSPI06G18940 vs. TAIR10
Match: AT1G19210.1 (AT1G19210.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-30
Identity = 89/210 (42.38%), Postives = 116/210 (55.24%), Query Frame = 1 

Query: 8   TSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHA 67
           +S++  +KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG +A
Sbjct: 4   SSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNA 63

Query: 68  KFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEEK 127
           KFNFPD P P I    +L+  +I+E AA+FAN  E    DD    A              
Sbjct: 64  KFNFPDNP-PVISGGRNLSRSEIREAAARFANSAE----DDSSGGAGYEIR--------- 123

Query: 128 CGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILTNDF-YQS 187
                S+S   ++D  FL  +     P     + +S    FP ++D  D    + F  Q 
Sbjct: 124 ---QESASTSMDVDSEFLSML-----PTVGSGNFASEFGLFPGFDDFSDEYSGDRFREQL 183

Query: 188 STTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
           S T +   L +    D         FLWNF
Sbjct: 184 SPTQDYYQLGEETYAD------GSMFLWNF 185

[Close]
BLAST of CSPI06G18940 vs. TAIR10
Match: AT4G31060.1 (AT4G31060.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.5e-22
Identity = 54/110 (49.09%), Postives = 67/110 (60.91%), Query Frame = 1 

Query: 16  YRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQP 75
           YRGVR+R WGKWV+EIR+P +  RIWLGSYD+PEKAARA+DAALFC+RG    +NFP   
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 76  LPDIL--NAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTT 124
            P +   +   L+   IQ  A  +A+         VV V    TT   TT
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYAS--------SVVHVPSHATTLPATT 128

[Close]
BLAST of CSPI06G18940 vs. TAIR10
Match: AT4G36900.1 (AT4G36900.1 related to AP2 10)

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1 

Query: 13 DTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFP 72
          D  Y+G+R RKWGKWVAEIR PN R RIWLGSY +PE AARA+D A+F LRGP A+ NFP
Sbjct: 27 DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFP 86

Query: 73 D 74
          +
Sbjct: 87 E 87

[Close]
BLAST of CSPI06G18940 vs. NCBI nr
Match: gi|449453065|ref|XP_004144279.1| (PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 4.0e-121
Identity = 213/216 (98.61%), Postives = 213/216 (98.61%), Query Frame = 1 

Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF
Sbjct: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTT 120
           CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPP   T
Sbjct: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPP---T 120

Query: 121 TTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILT 180
           TTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILT
Sbjct: 121 TTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILT 180

Query: 181 NDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
           NDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF
Sbjct: 181 NDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 213

[Close]
BLAST of CSPI06G18940 vs. NCBI nr
Match: gi|659133674|ref|XP_008466852.1| (PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 1.9e-110
Identity = 200/217 (92.17%), Postives = 206/217 (94.93%), Query Frame = 1 

Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           MNNN+SQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF
Sbjct: 1   MNNNLSQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPP-TTT 120
           CLRGPHAKFNFP+QPLPDILNAHSLTAHQIQEFAAKFANEY+CHQND V DVAPPP TTT
Sbjct: 61  CLRGPHAKFNFPEQPLPDILNAHSLTAHQIQEFAAKFANEYDCHQNDVVDDVAPPPTTTT 120

Query: 121 TTTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNIL 180
           TTTTAE+ CG SPSSSNYNN+DWSFLDEIHDHH  NPNPH   SSSNFFPLYNDHFDNIL
Sbjct: 121 TTTTAEDNCGNSPSSSNYNNVDWSFLDEIHDHH--NPNPH---SSSNFFPLYNDHFDNIL 180

Query: 181 TNDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
           TNDFYQSSTTNN +DLYDAVSGDDDDTFSNQPFLWNF
Sbjct: 181 TNDFYQSSTTNNTNDLYDAVSGDDDDTFSNQPFLWNF 212

[Close]
BLAST of CSPI06G18940 vs. NCBI nr
Match: gi|743812583|ref|XP_011019312.1| (PREDICTED: ethylene-responsive transcription factor ERF017 [Populus euphratica])

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 97/212 (45.75%), Postives = 128/212 (60.38%), Query Frame = 1 

Query: 7   QTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPH 66
           Q+    + KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG  
Sbjct: 16  QSDRTHEPKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGSG 75

Query: 67  AKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEE 126
           AKFNFPD P PDI+   SLT  ++QE AA+FAN+ E   +   +           T++  
Sbjct: 76  AKFNFPDNP-PDIVGGRSLTPQEVQEVAARFANK-EPTSSSTAMGGESSSRVENYTSSSS 135

Query: 127 KCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYN--DHFDNILTNDFY 186
           +CG     S  + +DWSFL           N   S+  ++ F LY+  DH    +  D+Y
Sbjct: 136 ECGAGQMDS--DTIDWSFL-----------NLLDSNEGASDFGLYHGLDH----MGGDYY 195

Query: 187 QSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
              T     D Y+    + D+T+S+Q FLWNF
Sbjct: 196 PPPTPPPPPD-YNGDDNNGDETYSHQSFLWNF 207

[Close]
BLAST of CSPI06G18940 vs. NCBI nr
Match: gi|1021528855|ref|XP_016207850.1| (PREDICTED: ethylene-responsive transcription factor ERF016-like [Arachis ipaensis])

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 96/239 (40.17%), Postives = 137/239 (57.32%), Query Frame = 1 

Query: 2   NNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFC 61
           N+ +++   +    Y+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+ +KAARAFDAAL+C
Sbjct: 17  NSTLNRVVDSSCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQQKAARAFDAALYC 76

Query: 62  LRGPHAKFNFPDQPL----PDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPT 121
           LRG HA FNFPD PL     ++ + HSL+ H+IQ+ A+KFAN ++  + ++      P +
Sbjct: 77  LRGRHASFNFPDTPLHLEINNVSHYHSLSHHEIQQVASKFANNFDAEEEEE------PSS 136

Query: 122 TTTTTTAEEKCGISPSSSNYNN--------------MDWSFLDEIHDHHYPNPNPHSSSS 181
                +A   C    S++N NN              MDW+FL+ + D +  N      ++
Sbjct: 137 QNGANSASSVCDYDGSNNNNNNDDNTNNNVQVDHGDMDWTFLNVLDDQNDSN----FDNT 196

Query: 182 SSNFFPLYNDHFDNILTNDFYQSST------TNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
               F LY    D + + +F  ++T       NNN D       DDDD FSN  FLW++
Sbjct: 197 IGYDFGLYYGGIDKVHSGEFLYTTTPPTTFEDNNNGD------ADDDDAFSNHSFLWSW 239

[Close]
BLAST of CSPI06G18940 vs. NCBI nr
Match: gi|224088649|ref|XP_002308508.1| (hypothetical protein POPTR_0006s23480g [Populus trichocarpa])

HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36
Identity = 98/212 (46.23%), Postives = 126/212 (59.43%), Query Frame = 1 

Query: 7   QTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPH 66
           Q+    + KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG  
Sbjct: 16  QSDRTHEPKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGSG 75

Query: 67  AKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTTTTAEE 126
           AKFNFPD P PDI+   SLT  ++QE AA+FANE     +   +           T++  
Sbjct: 76  AKFNFPDNP-PDIVGGRSLTPQEVQEVAARFANEEP--TSSTAMGGESSSHVENYTSSSS 135

Query: 127 KCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYN--DHFDNILTNDFY 186
            CG     S  + +DWSFL           N   S+  ++ F LY+  DH    +  D+Y
Sbjct: 136 DCGAGQMDS--DTIDWSFL-----------NLLDSNEGASDFGLYHGLDH----MGGDYY 195

Query: 187 QSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF 217
              T     D Y+    + D+TFS+Q FLWNF
Sbjct: 196 PPPTPPPPPD-YNGDDNNGDETFSHQSFLWNF 206

The following BLAST results are available for this feature:
BLAST of CSPI06G18940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF18_ARATH1.9e-3049.32Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF16_ARATH2.1e-2942.53Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF17_ARATH3.6e-2942.38Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF15_ARATH8.1e-2149.09Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF01... [more]
RA210_ARATH6.8e-2068.85Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2... [more]
BLAST of CSPI06G18940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIJ3_CUCSA2.8e-12198.61Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361330 PE=4 SV=1[more]
A9PLA3_POPTR9.6e-3746.23RAP2-like protein OS=Populus trichocarpa GN=RAP2L13 PE=4 SV=1[more]
B9IKF6_POPTR2.6e-3443.89Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s08320g PE=4 SV=1[more]
A0A067KNY6_JATCU4.4e-3443.84Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07576 PE=4 SV=1[more]
A0A140WWF1_LOTCO2.9e-3340.16AP2/ERF OS=Lotus corniculatus GN=SRF3 PE=2 SV=1[more]
BLAST of CSPI06G18940 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G74930.11.1e-3149.32 Integrase-type DNA-binding superfamily protein[more]
AT5G21960.11.2e-3042.53 Integrase-type DNA-binding superfamily protein[more]
AT1G19210.12.0e-3042.38 Integrase-type DNA-binding superfamily protein[more]
AT4G31060.14.5e-2249.09 Integrase-type DNA-binding superfamily protein[more]
AT4G36900.13.8e-2168.85 related to AP2 10[more]
BLAST of CSPI06G18940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453065|ref|XP_004144279.1|4.0e-12198.61PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus][more]
gi|659133674|ref|XP_008466852.1|1.9e-11092.17PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo][more]
gi|743812583|ref|XP_011019312.1|1.0e-3645.75PREDICTED: ethylene-responsive transcription factor ERF017 [Populus euphratica][more]
gi|1021528855|ref|XP_016207850.1|1.0e-3640.17PREDICTED: ethylene-responsive transcription factor ERF016-like [Arachis ipaensi... [more]
gi|224088649|ref|XP_002308508.1|1.4e-3646.23hypothetical protein POPTR_0006s23480g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0051301 cell division
biological_process GO:0002213 defense response to insect
biological_process GO:0010087 phloem or xylem histogenesis
biological_process GO:0009611 response to wounding
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G18940.1CSPI06G18940.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 16..27
score: 2.1E-9coord: 38..54
score: 2.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 15..73
score: 1.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 14..64
score: 3.0
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 15..78
score: 3.7
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 15..72
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 15..73
score: 1.63
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 173..216
score: 1.2E-64coord: 1..153
score: 1.2
NoneNo IPR availablePANTHERPTHR31985:SF34ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018coord: 173..216
score: 1.2E-64coord: 1..153
score: 1.2