CsaV3_6G031820 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G031820
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	ethylene-responsive transcription factor ERF017-like
Location	chr6 : 17955495 .. 17956444 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTATTAGATCATCCAATTTTCATCACTACTCTACCTCTCTCTCATGAACAATAATATTTCCCAAACTTCCGCCGCCGGTGACACCAAATACAGAGGTGTTCGGCGGCGTAAATGGGGGAAATGGGTTGCGGAAATCCGTCTCCCAAACAGCCGAGACCGTATATGGCTCGGTTCTTACGACTCACCAGAGAAAGCTGCTCGAGCTTTTGATGCTGCTCTTTTCTGCCTGCGTGGTCCTCATGCCAAGTTTAACTTCCCTGACCAACCACTGCCTGACATTCTTAATGCTCATTCACTCACTGCCCATCAGATTCAAGAGTTTGCTGCTAAGTTCGCTAATGAGTATGAGTGTCACCAAAACGACGACGTCGTTGATGTAGCTCCTCCACCCACTACTACTACTGCTGAAGAAAAATGTGGAATTTCACCTTCCTCCTCTAATTATAACAATATGGATTGGTCATTCCTTGATGAAATTCACGATCATCACTACCCCAACCCCAACCCCCATTCTTCTTCCTCTTCTTCCAATTTCTTTCCTCTTTACAATGACCATTTTGATAATATCTTAACCAATGATTTTTATCAATCTTCCACCACCAACAACAACGACGACCTTTACGATGCTGTTTCTGGTGACGACGACGACACTTTCTCCAACCAACCCTTTCTTTGGAACTTTTAAATCTCACCCTAATTATATCAAGCAATATCTTTCCTATATAGATATTTTACATCCTACTATACTTAGGCCTTACAACTACAAGGCTCTCCCTTTTTTCTACTTTCTCTCTAAGTCTAATTTTTTGGGGAGAAAATCAAATTAAAAACCCTTCAAAGAAAAGAACTTTTATTTTTATAAGTGTAGGGTTCTTTTTATTTCCGGGGAAAATGAAGAAAAATAAACCTTTTTTTTGTTTTTTGTTTTTTTTTGTTTTTCCCCCCCCC

mRNA sequence

ATGAACAATAATATTTCCCAAACTTCCGCCGCCGGTGACACCAAATACAGAGGTGTTCGGCGGCGTAAATGGGGGAAATGGGTTGCGGAAATCCGTCTCCCAAACAGCCGAGACCGTATATGGCTCGGTTCTTACGACTCACCAGAGAAAGCTGCTCGAGCTTTTGATGCTGCTCTTTTCTGCCTGCGTGGTCCTCATGCCAAGTTTAACTTCCCTGACCAACCACTGCCTGACATTCTTAATGCTCATTCACTCACTGCCCATCAGATTCAAGAGTTTGCTGCTAAGTTCGCTAATGAGTATGAGTGTCACCAAAACGACGACGTCGTTGATGTAGCTCCTCCACCCACTACTACTACTGCTGAAGAAAAATGTGGAATTTCACCTTCCTCCTCTAATTATAACAATATGGATTGGTCATTCCTTGATGAAATTCACGATCATCACTACCCCAACCCCAACCCCCATTCTTCTTCCTCTTCTTCCAATTTCTTTCCTCTTTACAATGACCATTTTGATAATATCTTAACCAATGATTTTTATCAATCTTCCACCACCAACAACAACGACGACCTTTACGATGCTGTTTCTGGTGACGACGACGACACTTTCTCCAACCAACCCTTTCTTTGGAACTTTTAA

Coding sequence (CDS)

ATGAACAATAATATTTCCCAAACTTCCGCCGCCGGTGACACCAAATACAGAGGTGTTCGGCGGCGTAAATGGGGGAAATGGGTTGCGGAAATCCGTCTCCCAAACAGCCGAGACCGTATATGGCTCGGTTCTTACGACTCACCAGAGAAAGCTGCTCGAGCTTTTGATGCTGCTCTTTTCTGCCTGCGTGGTCCTCATGCCAAGTTTAACTTCCCTGACCAACCACTGCCTGACATTCTTAATGCTCATTCACTCACTGCCCATCAGATTCAAGAGTTTGCTGCTAAGTTCGCTAATGAGTATGAGTGTCACCAAAACGACGACGTCGTTGATGTAGCTCCTCCACCCACTACTACTACTGCTGAAGAAAAATGTGGAATTTCACCTTCCTCCTCTAATTATAACAATATGGATTGGTCATTCCTTGATGAAATTCACGATCATCACTACCCCAACCCCAACCCCCATTCTTCTTCCTCTTCTTCCAATTTCTTTCCTCTTTACAATGACCATTTTGATAATATCTTAACCAATGATTTTTATCAATCTTCCACCACCAACAACAACGACGACCTTTACGATGCTGTTTCTGGTGACGACGACGACACTTTCTCCAACCAACCCTTTCTTTGGAACTTTTAA

Protein sequence

MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDVAPPPTTTTAEEKCGISPSSSNYNNMDWSFLDEIHDHHYPNPNPHSSSSSSNFFPLYNDHFDNILTNDFYQSSTTNNNDDLYDAVSGDDDDTFSNQPFLWNF

Homology

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BLAST of CsaV3_6G031820 vs. NCBI nr
Match: XP_004144279.1 (PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus] >KGN47571.1 hypothetical protein Csa_6G361330 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 3.9e-88
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF
Sbjct: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDXXXXXXXXX 120
           CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDXXXXXXXXX
Sbjct: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDXXXXXXXXX 120

Query: 121 XXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDF 180
           XXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDF
Sbjct: 121 XXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDF 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 214
           XXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 213

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BLAST of CsaV3_6G031820 vs. NCBI nr
Match: XP_008466852.1 (PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74
Identity = 158/217 (72.81%), Postives = 162/217 (74.65%), Query Frame = 0


Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           MNNN+SQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF
Sbjct: 1   MNNNLSQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQND----DVVDXXXXX 120
           CLRGPHAKFNFP+QPLPDILNAHSLTAHQIQEFAAKFANEY+CHQND        XXXXX
Sbjct: 61  CLRGPHAKFNFPEQPLPDILNAHSLTAHQIQEFAAKFANEYDCHQNDVXXXXXXXXXXXX 120

Query: 121 XXXXXXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNIL 180
           XXXXXXX         NYNN+DWSFLDEIHD                FFPLYNDHFDNIL
Sbjct: 121 XXXXXXXXXXXXXXXXNYNNVDWSFLDEIHD-----HHNPNPHSSSNFFPLYNDHFDNIL 180

Query: 181 TNDFXXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 214
           TNDF                      TFSNQPFLWNF
Sbjct: 181 TNDFYQSSTTNNTNDLYDAVSGDDDDTFSNQPFLWNF 212

[Close]

BLAST of CsaV3_6G031820 vs. NCBI nr
Match: XP_022998976.1 (ethylene-responsive transcription factor ERF017-like [Cucurbita maxima])

HSP 1 Score: 223.4 bits (568), Expect = 7.4e-55
Identity = 124/223 (55.61%), Postives = 140/223 (62.78%), Query Frame = 0


Query: 1   MNNN-----ISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAF 60
           MNNN     +SQTSAAGDTKY+GVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAF
Sbjct: 1   MNNNNNPPELSQTSAAGDTKYKGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAF 60

Query: 61  DAALFCLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYE-----CHQNDDVV 120
           DAALFCLRG  AKFNFP+QPLPDIL+AHSLTAH+IQ+ AAKFAN+YE       QN+  V
Sbjct: 61  DAALFCLRGRQAKFNFPNQPLPDILDAHSLTAHEIQQLAAKFANDYEHSSSSADQNNAAV 120

Query: 121 DXXXXXXXXXXXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYND 180
           D                +P +++  N+DWSFLD +                   FPLYND
Sbjct: 121 DRLQ-------------APPATSDQNIDWSFLDNL-------DAVDYTPDASNLFPLYND 180

Query: 181 HFDNILTNDFXXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 214
            FDNILT+DF                        + Q FLWNF
Sbjct: 181 DFDNILTSDFYQSPNDHYDDEDSIP---------AGQSFLWNF 194

[Close]

BLAST of CsaV3_6G031820 vs. NCBI nr
Match: XP_022946699.1 (ethylene-responsive transcription factor ERF017-like [Cucurbita moschata])

HSP 1 Score: 213.4 bits (542), Expect = 7.6e-52
Identity = 117/213 (54.93%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 6   SQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGP 65
           S  SAAGDTKY+GVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRG 
Sbjct: 14  SAASAAGDTKYKGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGR 73

Query: 66  HAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYE-----CHQNDDVVDXXXXXXXXX 125
            AKFNFP+QPLPDIL+AHSLTAH+IQ+ AAKFAN+Y+       QN+  VD         
Sbjct: 74  QAKFNFPNQPLPDILDAHSLTAHEIQQLAAKFANDYQHSSSSADQNNADVDRLQ------ 133

Query: 126 XXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDF 185
                  +P +++  N+DWSFLD +                   FPLYND FDNILT+DF
Sbjct: 134 -------APPATSDQNIDWSFLDNL-------DAVDYAPDTSNLFPLYNDDFDNILTSDF 193

Query: 186 XXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 214
                                   + Q FLWNF
Sbjct: 194 --------YQSSNDHYDDEDSIAAAGQSFLWNF 198

[Close]

BLAST of CsaV3_6G031820 vs. NCBI nr
Match: XP_023547217.1 (ethylene-responsive transcription factor ERF017-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.9 bits (533), Expect = 8.4e-51
Identity = 120/208 (57.69%), Postives = 135/208 (64.90%), Query Frame = 0


Query: 12  GDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNF 71
           GDTKY+GVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRG  AKFNF
Sbjct: 20  GDTKYKGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGRQAKFNF 79

Query: 72  PDQPLPDILNAHSLTAHQIQEFAAKFANEYECH------QNDDVVDXXXXXXXXXXXXKC 131
           P+QPLPDIL+AHSLTAH+IQ+ AAKFAN+Y  H      QN+  VD              
Sbjct: 80  PNQPLPDILDAHSLTAHEIQQLAAKFANDYNQHSSSSADQNNAAVDRLQ----------- 139

Query: 132 GISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDFXXXXX 191
             +P +++  N+DWSFLD +                   FPLYND FDNILT+DF     
Sbjct: 140 --APPATSDQNIDWSFLDNL-------DAVDYTPDTSNLFPLYNDDFDNILTSDF----- 199

Query: 192 XXXXXXXXXXXXXXXXXTFSNQPFLWNF 214
                      XXXXXX  + Q FLWNF
Sbjct: 200 -YQSPNDHYDDXXXXXXXXAGQSFLWNF 201

[Close]

BLAST of CsaV3_6G031820 vs. TAIR10
Match: AT1G19210.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 7.4e-33
Identity = 64/95 (67.37%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 8   TSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHA 67
           +S++  +KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG +A
Sbjct: 4   SSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNA 63

Query: 68  KFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYE 103
           KFNFPD P P I    +L+  +I+E AA+FAN  E
Sbjct: 64  KFNFPDNP-PVISGGRNLSRSEIREAAARFANSAE 97

[Close]

BLAST of CsaV3_6G031820 vs. TAIR10
Match: AT5G21960.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32
Identity = 65/86 (75.58%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 15  KYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQ 74
           KY GVR+RKWGKWVAEIRLPNSRDRIWLGS+DS EKAARAFDAAL+CLRGP A+FNFPD 
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 75  PLPDILNAHSLTAHQIQEFAAKFANE 101
           P P+I    SLT  QIQ  A++FA E
Sbjct: 66  P-PEIPGGRSLTPQQIQVVASRFACE 90

[Close]

BLAST of CsaV3_6G031820 vs. TAIR10
Match: AT1G74930.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-31
Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           M     + + A  +KY+GVR+RKWGKWV+EIRLP+SR+RIWLGSYD+PEKAARAFDAA F
Sbjct: 6   MKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQF 65

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYE 103
           CLRG  A FNFP+ P P I    SLT  +IQE AA+FAN ++
Sbjct: 66  CLRGGDANFNFPNNP-PSISVEKSLTPPEIQEAAARFANTFQ 106

[Close]

BLAST of CsaV3_6G031820 vs. TAIR10
Match: AT4G31060.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 16  YRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQP 75
           YRGVR+R WGKWV+EIR+P +  RIWLGSYD+PEKAARA+DAALFC+RG    +NFP   
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 76  LPDIL--NAHSLTAHQIQEFAAKFAN 100
            P +   +   L+   IQ  A  +A+
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYAS 112

[Close]

BLAST of CsaV3_6G031820 vs. TAIR10
Match: AT4G36900.1 (related to AP2 10)

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 13 DTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFP 72
          D  Y+G+R RKWGKWVAEIR PN R RIWLGSY +PE AARA+D A+F LRGP A+ NFP
Sbjct: 27 DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFP 86

Query: 73 D 74
          +
Sbjct: 87 E 87

[Close]

BLAST of CsaV3_6G031820 vs. Swiss-Prot
Match: sp|Q84QC2|ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 GN=ERF017 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 64/95 (67.37%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 8   TSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHA 67
           +S++  +KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG +A
Sbjct: 4   SSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNA 63

Query: 68  KFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYE 103
           KFNFPD P P I    +L+  +I+E AA+FAN  E
Sbjct: 64  KFNFPDNP-PVISGGRNLSRSEIREAAARFANSAE 97

[Close]

BLAST of CsaV3_6G031820 vs. Swiss-Prot
Match: sp|Q9C591|ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana OX=3702 GN=ERF016 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.9e-31
Identity = 65/86 (75.58%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 15  KYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQ 74
           KY GVR+RKWGKWVAEIRLPNSRDRIWLGS+DS EKAARAFDAAL+CLRGP A+FNFPD 
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 75  PLPDILNAHSLTAHQIQEFAAKFANE 101
           P P+I    SLT  QIQ  A++FA E
Sbjct: 66  P-PEIPGGRSLTPQQIQVVASRFACE 90

[Close]

BLAST of CsaV3_6G031820 vs. Swiss-Prot
Match: sp|Q9S7L5|ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana OX=3702 GN=ERF018 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30
Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           M     + + A  +KY+GVR+RKWGKWV+EIRLP+SR+RIWLGSYD+PEKAARAFDAA F
Sbjct: 6   MKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQF 65

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYE 103
           CLRG  A FNFP+ P P I    SLT  +IQE AA+FAN ++
Sbjct: 66  CLRGGDANFNFPNNP-PSISVEKSLTPPEIQEAAARFANTFQ 106

[Close]

BLAST of CsaV3_6G031820 vs. Swiss-Prot
Match: sp|Q6NLD5|ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana OX=3702 GN=ERF015 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.7e-21
Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 16  YRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQP 75
           YRGVR+R WGKWV+EIR+P +  RIWLGSYD+PEKAARA+DAALFC+RG    +NFP   
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 76  LPDIL--NAHSLTAHQIQEFAAKFAN 100
            P +   +   L+   IQ  A  +A+
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYAS 112

[Close]

BLAST of CsaV3_6G031820 vs. Swiss-Prot
Match: sp|Q9SW63|RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702 GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.8e-20
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 13 DTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFP 72
          D  Y+G+R RKWGKWVAEIR PN R RIWLGSY +PE AARA+D A+F LRGP A+ NFP
Sbjct: 27 DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFP 86

Query: 73 D 74
          +
Sbjct: 87 E 87

[Close]

BLAST of CsaV3_6G031820 vs. TrEMBL
Match: tr|A0A0A0KIJ3|A0A0A0KIJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361330 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 2.6e-88
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF
Sbjct: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDXXXXXXXXX 120
           CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDXXXXXXXXX
Sbjct: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQNDDVVDXXXXXXXXX 120

Query: 121 XXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDF 180
           XXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDF
Sbjct: 121 XXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNILTNDF 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 214
           XXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 213

[Close]

BLAST of CsaV3_6G031820 vs. TrEMBL
Match: tr|A0A1S3CSD2|A0A1S3CSD2_CUCME (ethylene-responsive transcription factor ERF017-like OS=Cucumis melo OX=3656 GN=LOC103504158 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.6e-74
Identity = 158/217 (72.81%), Postives = 162/217 (74.65%), Query Frame = 0


Query: 1   MNNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60
           MNNN+SQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF
Sbjct: 1   MNNNLSQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALF 60

Query: 61  CLRGPHAKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANEYECHQND----DVVDXXXXX 120
           CLRGPHAKFNFP+QPLPDILNAHSLTAHQIQEFAAKFANEY+CHQND        XXXXX
Sbjct: 61  CLRGPHAKFNFPEQPLPDILNAHSLTAHQIQEFAAKFANEYDCHQNDVXXXXXXXXXXXX 120

Query: 121 XXXXXXXKCGISPSSSNYNNMDWSFLDEIHDXXXXXXXXXXXXXXXXFFPLYNDHFDNIL 180
           XXXXXXX         NYNN+DWSFLDEIHD                FFPLYNDHFDNIL
Sbjct: 121 XXXXXXXXXXXXXXXXNYNNVDWSFLDEIHD-----HHNPNPHSSSNFFPLYNDHFDNIL 180

Query: 181 TNDFXXXXXXXXXXXXXXXXXXXXXXTFSNQPFLWNF 214
           TNDF                      TFSNQPFLWNF
Sbjct: 181 TNDFYQSSTTNNTNDLYDAVSGDDDDTFSNQPFLWNF 212

[Close]

BLAST of CsaV3_6G031820 vs. TrEMBL
Match: tr|A0A218XFT0|A0A218XFT0_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr009332 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.1e-34
Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 16  YRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPHAKFNFPDQP 75
           Y+GVR+RKWGKWV+EIRLPNSR+RIWLGSYDS EKAARAFDAALFCLRG +AKFNFP  P
Sbjct: 42  YKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGQNAKFNFPSSP 101

Query: 76  LPDILNAHSLTAHQIQEFAAKFANEYE-CHQNDDVVDXXXXXXXXXXXXKCGISPSSSNY 135
            PDI+ AH+L+  +IQ  AA+FANE+    + +  +D              G++   S  
Sbjct: 102 -PDIVGAHNLSPQEIQAVAARFANEHHPGPEGESSID--------EPPRSSGVAAQGSGG 161

Query: 136 NNMDWSFLDEIHD 148
           N++DWSFL  +H+
Sbjct: 162 NSIDWSFLGALHE 165

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BLAST of CsaV3_6G031820 vs. TrEMBL
Match: tr|A9PLA3|A9PLA3_POPTR (RAP2-like protein OS=Populus trichocarpa OX=3694 GN=RAP2L13 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-32
Identity = 67/94 (71.28%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 7   QTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFCLRGPH 66
           Q+    + KY+GVR+RKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAAL+CLRG  
Sbjct: 16  QSDRTHEPKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGSG 75

Query: 67  AKFNFPDQPLPDILNAHSLTAHQIQEFAAKFANE 101
           AKFNFPD P PDI+   SLT  ++QE AA+FANE
Sbjct: 76  AKFNFPDNP-PDIVGGRSLTPQEVQEVAARFANE 108

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BLAST of CsaV3_6G031820 vs. TrEMBL
Match: tr|A0A2P4N2B0|A0A2P4N2B0_QUESU (Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_23721 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 81/157 (51.59%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 2   NNNISQTSAAGDTKYRGVRRRKWGKWVAEIRLPNSRDRIWLGSYDSPEKAARAFDAALFC 61
           +  + Q S   DTKY+GVRRRKWGKWV+EIRLPNSR+RIWLGSYD+PEKAARAFDAALFC
Sbjct: 14  SREVQQPSEQSDTKYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALFC 73

Query: 62  LRGPHAKFNFPDQPLPDILNAH---SLTAHQIQEFAAKFAN---EYECHQNDDVVDXXXX 121
           LRGP AKFNFPD P    +NA+   +L+  +I+  AA+FAN   + + H   D  D    
Sbjct: 74  LRGPDAKFNFPDTPPEININANGRQTLSPQEIRVLAARFANDDDDKDSHPPKD-NDFLGE 133

Query: 122 XXXXXXXXKC----------GISPSSSNYNNMDWSFL 143
                   +C          G     SN   MDWSFL
Sbjct: 134 SSSHMVVDQCYTPSTSSVSDGTVHVDSNNEAMDWSFL 169

The following BLAST results are available for this feature:

BLAST of CsaV3_6G031820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144279.1	3.9e-88	100.00	PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus] >KG...	[more]
XP_008466852.1	2.4e-74	72.81	PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo]	[more]
XP_022998976.1	7.4e-55	55.61	ethylene-responsive transcription factor ERF017-like [Cucurbita maxima]	[more]
XP_022946699.1	7.6e-52	54.93	ethylene-responsive transcription factor ERF017-like [Cucurbita moschata]	[more]
XP_023547217.1	8.4e-51	57.69	ethylene-responsive transcription factor ERF017-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of CsaV3_6G031820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19210.1	7.4e-33	67.37	Integrase-type DNA-binding superfamily protein	[more]
AT5G21960.1	2.1e-32	75.58	Integrase-type DNA-binding superfamily protein	[more]
AT1G74930.1	1.8e-31	62.75	Integrase-type DNA-binding superfamily protein	[more]
AT4G31060.1	2.6e-22	54.65	Integrase-type DNA-binding superfamily protein	[more]
AT4G36900.1	3.8e-21	68.85	related to AP2 10	[more]

BLAST of CsaV3_6G031820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84QC2\|ERF17_ARATH	1.3e-31	67.37	Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9C591\|ERF16_ARATH	3.9e-31	75.58	Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9S7L5\|ERF18_ARATH	3.3e-30	62.75	Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q6NLD5\|ERF15_ARATH	4.7e-21	54.65	Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SW63\|RA210_ARATH	6.8e-20	68.85	Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CsaV3_6G031820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIJ3\|A0A0A0KIJ3_CUCSA	2.6e-88	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361330 PE=4 SV=1	[more]
tr\|A0A1S3CSD2\|A0A1S3CSD2_CUCME	1.6e-74	72.81	ethylene-responsive transcription factor ERF017-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A218XFT0\|A0A218XFT0_PUNGR	8.1e-34	56.39	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr009332 PE=4 SV=1	[more]
tr\|A9PLA3\|A9PLA3_POPTR	4.4e-32	71.28	RAP2-like protein OS=Populus trichocarpa OX=3694 GN=RAP2L13 PE=4 SV=1	[more]
tr\|A0A2P4N2B0\|A0A2P4N2B0_QUESU	1.3e-31	51.59	Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_2372...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR017392	AP2/ERF-transcript_factor
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0051301	cell division
biological_process	GO:0002213	defense response to insect
biological_process	GO:0010087	phloem or xylem histogenesis
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G031820.1	CsaV3_6G031820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 38..54 score: 52.62 coord: 16..27 score: 71.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 15..78 e-value: 3.7E-34 score: 129.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 14..64 e-value: 4.6E-13 score: 49.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 15..72 score: 22.629
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 14..74 e-value: 1.08265E-30 score: 108.128
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 4..147 e-value: 2.0E-16 score: 58.3
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 14..74 e-value: 2.3E-28 score: 99.8
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 9..194
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 15..73

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G031820	CSPI06G18940	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G031820	Cucsa.055920	Cucumber (Gy14) v1	cgycucB044
CsaV3_6G031820	CmaCh05G010070	Cucurbita maxima (Rimu)	cmacucB0951
CsaV3_6G031820	CmoCh05G010240	Cucurbita moschata (Rifu)	cmocucB0938
CsaV3_6G031820	CsGy6G018380	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G031820	Carg27030	Silver-seed gourd	carcucB0214
CsaV3_6G031820	Cla021957	Watermelon (97103) v1	cucwmB481
CsaV3_6G031820	ClCG08G009710	Watermelon (Charleston Gray)	cucwcgB514
CsaV3_6G031820	Lsi08G008230	Bottle gourd (USVL1VR-Ls)	cuclsiB500
CsaV3_6G031820	Cla97C08G152510	Watermelon (97103) v2	cucwmbB505
CsaV3_6G031820	Bhi04G001206	Wax gourd	cucwgoB606

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G031820	Silver-seed gourd	carcucB0154
CsaV3_6G031820	Cucurbita maxima (Rimu)	cmacucB0224
CsaV3_6G031820	Cucurbita moschata (Rifu)	cmocucB0213
CsaV3_6G031820	Cucurbita pepo (Zucchini)	cpecucB0132
CsaV3_6G031820	Cucurbita pepo (Zucchini)	cpecucB1036
CsaV3_6G031820	Melon (DHL92) v3.5.1	cucmeB475
CsaV3_6G031820	Melon (DHL92) v3.6.1	cucmedB465