CSPI06G06180 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGTCAGCAAGAAGTTGAAGCTTCCAATAACATAATTGCAATTCCTGATCCTCTCACCATTCATGTTATGGTTGTTGATGATGATGCTATTTCTCTTGCTGTCCTCTCAAACTTGCTCAAAACTTTGAACTATCAAGGTAAAAGCAAAACAAAAACAAAAATACTATTAGGTTTTAAATTCCCCTCTTCTTGTTTTGTGTTTCTATATTTTTGTCTTGCCATGTTTTTTTAGGTAAGAAAAAATGTTTTTAATCTAAGAAAGAAAAAAGAATTGGAAGAATTGAAGGTAGAACCAAGTTTTTGGAATATTGGTGATCCCTAATTCTTCTCTTTGTTAGGTTGGTATCTTGAATTTCAAGGTTGAATTCTTTTTTTCTTTTTCTCTTTCTGTAATTGAGACAATCAATATTAAAAACAATATATCTTTGTCGGTGTGTCTTTTATGTTATTCTTCCCTTTTTTTCGATACATAGCACATAAACACGTGCGAGTATCGACGAATATAAACGTAGATATGATCATTATAATTTAAAGTAGAGCTAACAAAAATGAAATATCTCTTTTTGGTGAAGAAATTATTGCTTAGATTGGATCAAATCCAACTCCTAGATCTTTTTACATCATAAGACACACCAAGACCCTTTTTTTGAGTAATTTACTCATTTTAATGAATTTCCCACAAATCATTTCCCTTCATAGATACAATTTTGTGCATTTTGAGTATAATTTATCAAACCCTAGCTAGCAAATCACTTTAGAAAATATATGTATTTATATTTAGAATAGAAAATTGATTAGAAATCAGTTAACTTTCAAATATAATTTTTTTTTTAATAATAAACTTAATGTTAATATTGTATATATAATGACAGCTTAAAGTGATGATGAAGATGATCAAGAGATGTATAGCTTTTGTTTCACAATTACACATAGAATTGTTTTCTAATTGCAGGCTACCATGTATATAATATTCCTTTCTTTTTCATTTTTAGTAAGCATTTAACCAACTTAGTTTTTCTCTTTGAAACAACCATAACATATATATTATACTATATATTTATCATTGTCTTCATTTTTCCTGGTTGATATAGTTAATTATTTATAAACTATATATATATATATATATTTTGCACATTCTTTTTCTTTTAACAAATCATAAGTGGGGATTGGAATAAAAAGATGTATTCGATCCTCTCAACTAAGTTTGACACAATCTTAACACCAACACCAACACCAACCTTCAAACTCACTCACGCAATTAGGAAATTTGTATATTGCCACAAAAAGGAAAAATTTGCACACATTCTCAAATCTTGCCTATGCCCTTTTTTCCTAGTATATATATAAACAGAGTTCAATTGTTTTTTTAGGAAGAAACTAAAGGATAAATGAGAACATAGGTGTACCAGACATCTAAGTTTACTTTAATAAATTTTCTTTTTCCAAATTAAATTTCAGTTGCTTCATTTGTCGACCCGATTCAAGCTTTGTCCACGCTTCGGGCGGGAAAACAATCTTTTGATCTCATTGTGACAGCTCTCCATATGTCAAAGATGAATGGTTTGGAGTTAACAAAGAGAGTAAATGATGAATTCAAGCTTCCTGTGATTAGTAAGTGTTTTTGAACTTTTTTGCCTTTAAATTTTTGTTTGAATGATTCACTCAAATATCAAATTTGAAAAAGCAGTGATTTCGACCGACAATGAAGAAAGCATCATGTATAGGGCGATACAAGAAGGGGTTGCACTCTACTTAGTGAAACCCTTCTTTCAAAATGACCTAAAAAACATTTGGCAATTTTCCATAACCACCAAATCACAAAGTAAACCAAACCCTAGCTTGACTATTGAAGAGACAATAAGCACCAATTATGGCGAAGGCAAGCTTCAAGCATTTGAAACGCACTCGGTCTCAGGTTCAAATGAAGTAATATCGTCAGAAAGGAAGAAGAAGAAGAGTTCAATAGAAAAGGATCAAGAGAAATCAAATGGTAAAAAGGAAGTGAAGTCTACAAGAAAAAAACCAAAGGTGGTTTGGACAGATTTCCTTCAATATAGATTCTTGCAAGCTGTTCATTTCATTGGTTTGGACAGTAAGAACATCATCTCAATGTGCATTATATTATTTTTTTATTCTTTTCAAATGTGTGTTGTTTCGAAACGATTTTGATCCGTCAAAATTTTGATGGTATGAAAATCGTCAATTTGTATCATTATTTGTGAGTGATTTTTTTCAAAATCACTCTCAAACTCATTTACAATAAGGCATATATATATTATTATATATGTGATTAATCTAATTTAACTTGATAAATTTGCAGGAGCTGTTCCAAAGAAAATCCTTGAAGTCATGAATGTGCCTGGTTTGACAAGGGAAAATGTTGCTAGCCATTTGCAGGTTCTTTTTTTATCATTATTATTATCATCCTAAATTCATATGATGTGTTAAATTGTTTAATTTTATACATTTTATTTTATTTATGAAATTTGGAGTCTTAACTTACAAGTTGAGTCAATGAAATCTCAATTTTGTGTTTATTTAGTCAATTTCATGTCTAATAGATATCTCGACTTTGATAATGTCTAATATGTTGTTCCTTTAATTTTTAATGTTTGAGTATGGTGAAACAAAATTTAAAAAACTCCAATATATATGAGACTCTAATAAAAATTCATGAAAGGGAAATTTGATTTTAATTTCTTCTTAATAAGTCAAGTTTTTGAAAATGTTGCAAATATGGGAAATTATTAATAGCTAATCTCTTAATCTGGGAAGAAAAATACCAAAGTCAACTAGAAGAGAGATTCTTAATTACATTAAACTTATATTAAATAATTCCATCTTTACCTTCTATTAATTTCTTCACATTCCATGCTCCATGTTTAAGCTGTATGCTCTAATTGTTTCAAAGCAGAAATATAGAATCTTCCTTAGAAAAGTTTCAGAAAGATGCATGATTGCACCAACCAAGACAACTGAAGAAATCCTGTGGTCAAAATTCCTCTCCCAACATGCTTCATTCATGTTACAAAATGTCCAACAAAAAGGAAACTCCCATCTCAATCCTTCTCAAAACCCTAATATCCATCCTTTAATTCCTATCCATCAAACTTGTTCATTAAACCCTAACAATGGCGACGGTCACTCCAAGCGTAAACCATCGAGTTTCGAGGCATACCACTTGCCCTACTACGGTCTAGGGAACCCAACAAGTTTTATGGCCAACTTCACCGGTTGTCCATTGCCAATAACGAACCAAAATTACAATGCTCAAGCTTTCAACCACAGTGGTGCTCAGTTCCCAAATTTGAATCACCTTGAGGATCCTTCTTATCTAGGTTGTTCAAGCTTCTGTGGCTATAACAACTACAACAAGTTCCCGGTCGGCTTTGGCGAGGGAGTTCCGATGGCAGCTCAGATGGGGATTCCTTCAAATGGATTTGATGGAAATGGTGAGTTTGGTCAATATGGTATTGGATTTGGTGGGAGTCATAACAGTTACAATTGGGGGTTGATGTGTAATAATAATGGTGTCAACTTTGGTGGGGATTCTCAAATCACAATGAGGCATTCAAGTCATCCTCTTGGTAATAAGGTATGCTAGGAAGAGTCAAACCTTCCCTCTTTAGATATTTAATTTCTTTTGTGCCTTTGTTGGTGTGTTTAATTTCAAAATTAAGCTAAATCTACCGTGTTTAACCAAATAAAATGGTGAATGGTTTGTTAGAAGGATTGTGATTCTAGAGGAAGATCATCGTCATTTATAGTAATGTTTTCAAATATAGCAAAATGAACCTAAGTTATTTATAAATATAGTAAAATTTTAAATTTTATTAGTGATAGTTATAGACCGTGATAAACATCTATTATGTGAATCTTCTAAGCTTTATTGTAGGTAGGAAGTAAAAGTTTTGTTATATTTGTAAATATATTTTCAACTATTTTTTTTCATTTAAAACAATTTTCCTTTATATTTTGTTGAGAAAAAAAACCAATACTGTTAGTTATTTTCTAGAAAGTACAATATATTCAAAGTCTATCAGCAATAGAGCCTACAATTCTATGAACAAAACAATCTTTAATTCACTCATACATTTCGTTATATATGTGTGTTATTATATAATACCCACACACACATATATATATAGTAGTGCAATTGGTTTCATTTGTAAAATTAGGATAGGAGCCAAAGCAGATTCTGATTTCTTAATTTTTCTTCTTCTATGTTCCCTTGCAGAACCCTGTTGATAATTCAATATTCCATCAACAAGTAAGTGATGAAATCTCAAAAACTTAACTTTCCATACTTTCTCAATATATAATGTATAGAAGAACTATATATATAGGATAAATATGTGTTGACAATATATTTCCTTTTCAATATATATATATATATAGTTCACATGGTTTTGAAAAAACTCAGTTTAATCCTTTGAAATATACTAAAACTTGTCAATTTAGATTAAAGTTTTTTGTTAATTAAAAAACAAAATTTCAATTTAAGATCTCACTATTGAAAAATGTTAAAAATTGATTAATTATATACTCTTACGTGGCACATACTTAGTGAATTAGCCAATAATTTAGAGAGAGAGAGAAAAAGTCAACAAAAAGAAGAAAACTCAAAACTCCAATCAATTTCTTAGGCATTTCACTTTTTTGTCTTTTAAAGATGAAAATGAAACAAACTTTAATTTAAAGTTTTTTTATGGAATAATGAAATAGAATTATATTTACTTTAAACCTTAATTGTAAGAAAATTATGTAAGTGTAGTTGAGATTAATTGTTATTTAATTCTTTGCAGCAGCAGCAACCTAATGGAGGTTTCATGAAAGACCAAAGCCAGCAGTTGTGCAACATAGTGTCCACAGCAGCTGAAGAAACTCCAACAACTGATCCTTTATCCATTGATGAACAGGTAAACCCTTCTTAA ATGGATTGTCAGCAAGAAGTTGAAGCTTCCAATAACATAATTGCAATTCCTGATCCTCTCACCATTCATGTTATGGTTGTTGATGATGATGCTATTTCTCTTGCTGTCCTCTCAAACTTGCTCAAAACTTTGAACTATCAAGTTGCTTCATTTGTCGACCCGATTCAAGCTTTGTCCACGCTTCGGGCGGGAAAACAATCTTTTGATCTCATTGTGACAGCTCTCCATATGTCAAAGATGAATGGTTTGGAGTTAACAAAGAGAGTAAATGATGAATTCAAGCTTCCTGTGATTAAGACAATAAGCACCAATTATGGCGAAGGCAAGCTTCAAGCATTTGAAACGCACTCGGTCTCAGGTTCAAATGAAGTAATATCGTCAGAAAGGAAGAAGAAGAAGAGTTCAATAGAAAAGGATCAAGAGAAATCAAATGGTAAAAAGGAAGTGAAGTCTACAAGAAAAAAACCAAAGGTGGTTTGGACAGATTTCCTTCAATATAGATTCTTGCAAGCTGTTCATTTCATTGGTTTGGACAGAGCTGTTCCAAAGAAAATCCTTGAAGTCATGAATGTGCCTGGTTTGACAAGGGAAAATGTTGCTAGCCATTTGCAGCTGTATGCTCTAATTGTTTCAAAGCAGAAATATAGAATCTTCCTTAGAAAAGTTTCAGAAAGATGCATGATTGCACCAACCAAGACAACTGAAGAAATCCTGTGGTCAAAATTCCTCTCCCAACATGCTTCATTCATGTTACAAAATGTCCAACAAAAAGGAAACTCCCATCTCAATCCTTCTCAAAACCCTAATATCCATCCTTTAATTCCTATCCATCAAACTTGTTCATTAAACCCTAACAATGGCGACGGTCACTCCAAGCGTAAACCATCGAGTTTCGAGGCATACCACTTGCCCTACTACGGTCTAGGGAACCCAACAAGTTTTATGGCCAACTTCACCGGTTGTCCATTGCCAATAACGAACCAAAATTACAATGCTCAAGCTTTCAACCACAGTGGTGCTCAGTTCCCAAATTTGAATCACCTTGAGGATCCTTCTTATCTAGGTTGTTCAAGCTTCTGTGGCTATAACAACTACAACAAGTTCCCGGTCGGCTTTGGCGAGGGAGTTCCGATGGCAGCTCAGATGGGGATTCCTTCAAATGGATTTGATGGAAATGGTGAGTTTGGTCAATATGGTATTGGATTTGGTGGGAGTCATAACAGTTACAATTGGGGGTTGATGTGTAATAATAATGGTGTCAACTTTGGTGGGGATTCTCAAATCACAATGAGGCATTCAAGTCATCCTCTTGGTAATAAGAACCCTGTTGATAATTCAATATTCCATCAACAACAGCAGCAACCTAATGGAGGTTTCATGAAAGACCAAAGCCAGCAGTTGTGCAACATAGTGTCCACAGCAGCTGAAGAAACTCCAACAACTGATCCTTTATCCATTGATGAACAGGTAAACCCTTCTTAA ATGGATTGTCAGCAAGAAGTTGAAGCTTCCAATAACATAATTGCAATTCCTGATCCTCTCACCATTCATGTTATGGTTGTTGATGATGATGCTATTTCTCTTGCTGTCCTCTCAAACTTGCTCAAAACTTTGAACTATCAAGTTGCTTCATTTGTCGACCCGATTCAAGCTTTGTCCACGCTTCGGGCGGGAAAACAATCTTTTGATCTCATTGTGACAGCTCTCCATATGTCAAAGATGAATGGTTTGGAGTTAACAAAGAGAGTAAATGATGAATTCAAGCTTCCTGTGATTAAGACAATAAGCACCAATTATGGCGAAGGCAAGCTTCAAGCATTTGAAACGCACTCGGTCTCAGGTTCAAATGAAGTAATATCGTCAGAAAGGAAGAAGAAGAAGAGTTCAATAGAAAAGGATCAAGAGAAATCAAATGGTAAAAAGGAAGTGAAGTCTACAAGAAAAAAACCAAAGGTGGTTTGGACAGATTTCCTTCAATATAGATTCTTGCAAGCTGTTCATTTCATTGGTTTGGACAGAGCTGTTCCAAAGAAAATCCTTGAAGTCATGAATGTGCCTGGTTTGACAAGGGAAAATGTTGCTAGCCATTTGCAGCTGTATGCTCTAATTGTTTCAAAGCAGAAATATAGAATCTTCCTTAGAAAAGTTTCAGAAAGATGCATGATTGCACCAACCAAGACAACTGAAGAAATCCTGTGGTCAAAATTCCTCTCCCAACATGCTTCATTCATGTTACAAAATGTCCAACAAAAAGGAAACTCCCATCTCAATCCTTCTCAAAACCCTAATATCCATCCTTTAATTCCTATCCATCAAACTTGTTCATTAAACCCTAACAATGGCGACGGTCACTCCAAGCGTAAACCATCGAGTTTCGAGGCATACCACTTGCCCTACTACGGTCTAGGGAACCCAACAAGTTTTATGGCCAACTTCACCGGTTGTCCATTGCCAATAACGAACCAAAATTACAATGCTCAAGCTTTCAACCACAGTGGTGCTCAGTTCCCAAATTTGAATCACCTTGAGGATCCTTCTTATCTAGGTTGTTCAAGCTTCTGTGGCTATAACAACTACAACAAGTTCCCGGTCGGCTTTGGCGAGGGAGTTCCGATGGCAGCTCAGATGGGGATTCCTTCAAATGGATTTGATGGAAATGGTGAGTTTGGTCAATATGGTATTGGATTTGGTGGGAGTCATAACAGTTACAATTGGGGGTTGATGTGTAATAATAATGGTGTCAACTTTGGTGGGGATTCTCAAATCACAATGAGGCATTCAAGTCATCCTCTTGGTAATAAGAACCCTGTTGATAATTCAATATTCCATCAACAACAGCAGCAACCTAATGGAGGTTTCATGAAAGACCAAAGCCAGCAGTTGTGCAACATAGTGTCCACAGCAGCTGAAGAAACTCCAACAACTGATCCTTTATCCATTGATGAACAGGTAAACCCTTCTTAA
BLAST of CSPI06G06180 vs. Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 7.2e-25 Identity = 85/257 (33.07%), Postives = 129/257 (50.19%), Query Frame = 1
BLAST of CSPI06G06180 vs. Swiss-Prot
Match: ORR24_ORYSJ (Two-component response regulator ORR24 OS=Oryza sativa subsp. japonica GN=RR24 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 4.8e-21 Identity = 81/256 (31.64%), Postives = 127/256 (49.61%), Query Frame = 1
BLAST of CSPI06G06180 vs. Swiss-Prot
Match: ORR24_ORYSI (Two-component response regulator ORR24 OS=Oryza sativa subsp. indica GN=RR24 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 4.8e-21 Identity = 81/256 (31.64%), Postives = 127/256 (49.61%), Query Frame = 1
BLAST of CSPI06G06180 vs. Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2) HSP 1 Score: 86.7 bits (213), Expect = 8.0e-16 Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 1
BLAST of CSPI06G06180 vs. Swiss-Prot
Match: ORR21_ORYSI (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica GN=RR21 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.3e-15 Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = 1
BLAST of CSPI06G06180 vs. TrEMBL
Match: A0A0A0K933_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G079200 PE=4 SV=1) HSP 1 Score: 599.0 bits (1543), Expect = 5.3e-168 Identity = 287/290 (98.97%), Postives = 288/290 (99.31%), Query Frame = 1
BLAST of CSPI06G06180 vs. TrEMBL
Match: A0A0A0KER8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G079210 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 5.4e-104 Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 1
BLAST of CSPI06G06180 vs. TrEMBL
Match: B9R9G8_RICCO (Two-component system sensor histidine kinase/response regulator, putative OS=Ricinus communis GN=RCOM_1497420 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.4e-38 Identity = 125/359 (34.82%), Postives = 187/359 (52.09%), Query Frame = 1
BLAST of CSPI06G06180 vs. TrEMBL
Match: M5X7A7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023185mg PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 3.0e-38 Identity = 123/299 (41.14%), Postives = 164/299 (54.85%), Query Frame = 1
BLAST of CSPI06G06180 vs. TrEMBL
Match: V4U759_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10006586mg PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31 Identity = 123/343 (35.86%), Postives = 170/343 (49.56%), Query Frame = 1
BLAST of CSPI06G06180 vs. TAIR10
Match: AT4G31920.1 (AT4G31920.1 response regulator 10) HSP 1 Score: 116.7 bits (291), Expect = 4.1e-26 Identity = 85/257 (33.07%), Postives = 129/257 (50.19%), Query Frame = 1
BLAST of CSPI06G06180 vs. TAIR10
Match: AT3G16857.2 (AT3G16857.2 response regulator 1) HSP 1 Score: 86.7 bits (213), Expect = 4.5e-17 Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 1
BLAST of CSPI06G06180 vs. TAIR10
Match: AT4G16110.1 (AT4G16110.1 response regulator 2) HSP 1 Score: 83.2 bits (204), Expect = 5.0e-16 Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 1
BLAST of CSPI06G06180 vs. TAIR10
Match: AT5G58080.1 (AT5G58080.1 response regulator 18) HSP 1 Score: 80.9 bits (198), Expect = 2.5e-15 Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
BLAST of CSPI06G06180 vs. TAIR10
Match: AT2G01760.1 (AT2G01760.1 response regulator 14) HSP 1 Score: 76.6 bits (187), Expect = 4.7e-14 Identity = 50/128 (39.06%), Postives = 80/128 (62.50%), Query Frame = 1
BLAST of CSPI06G06180 vs. NCBI nr
Match: gi|700191071|gb|KGN46275.1| (hypothetical protein Csa_6G079200 [Cucumis sativus]) HSP 1 Score: 599.0 bits (1543), Expect = 7.6e-168 Identity = 287/290 (98.97%), Postives = 288/290 (99.31%), Query Frame = 1
BLAST of CSPI06G06180 vs. NCBI nr
Match: gi|659120452|ref|XP_008460201.1| (PREDICTED: uncharacterized protein LOC103499086 [Cucumis melo]) HSP 1 Score: 533.5 bits (1373), Expect = 3.9e-148 Identity = 282/353 (79.89%), Postives = 302/353 (85.55%), Query Frame = 1
BLAST of CSPI06G06180 vs. NCBI nr
Match: gi|700191072|gb|KGN46276.1| (hypothetical protein Csa_6G079210 [Cucumis sativus]) HSP 1 Score: 386.3 bits (991), Expect = 7.8e-104 Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 1
BLAST of CSPI06G06180 vs. NCBI nr
Match: gi|223549958|gb|EEF51445.1| (two-component system sensor histidine kinase/response regulator, putative [Ricinus communis]) HSP 1 Score: 169.1 bits (427), Expect = 2.0e-38 Identity = 125/359 (34.82%), Postives = 187/359 (52.09%), Query Frame = 1
BLAST of CSPI06G06180 vs. NCBI nr
Match: gi|596053083|ref|XP_007220738.1| (hypothetical protein PRUPE_ppa023185mg, partial [Prunus persica]) HSP 1 Score: 167.9 bits (424), Expect = 4.4e-38 Identity = 123/299 (41.14%), Postives = 164/299 (54.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |