Cucsa.362450 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.362450
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Two-component response regulator
Location	scaffold03611 : 317309 .. 318238 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCTTCATTTGTCGACCCGGTTCAAGCTTTGTCCACGCTTCGGGCGGGAAAACAATCTTTTGATCTCATTGTGACAGCTCTCCATATGTCAAAGATGAATGGTTTGGAGTTAACAAAGAGAGTAAATGATGAATTCAAGCTTCCTGTGATTAGTAAGTGTTTTTTAACTTTTTTGCCTTTAAATTTTTGTTTGAATGATTCACTCAAATATCAAATTTGAAAAAGCAGTGATTTCGACCGACAATGAAGAAAGCATCATGTATAGGGCGATACAAGAAGGGGTTGCACTCTACTTAGTGAAACCCTTCTTTCAAAATGACCTAAAAAACATTTGGCAATTTTCCATAACCACCAAATCACAAAGTAAACCAAACCCTAGCTTGACTATTGAAGAGACAATAAGCACCAATTATGGCGAAGGCAAGCTTCAAGCATTTGAAACGCACTCGGTCTCAGGTTCAAATGAAGTAATATCGTCAGAAAGGAAGAAGAAGAAGAGTTCAATAGAAAAGGATCAAGAGAAATCAAATGGTAAAAAGGAAGTGAAGTCTACAAGAAAAAAaCCAAAGGTGGTTTGGACAGATTTCCTTCAATATAGATTCTTGCAAGCTGTTCATTTCATTGGCTTGGACAGTAAGAACATCATCTCAATGTGCATTATATTATTTTTTTATTCTTTTCAAATGTGTGTTGTTTCGAAACGATTTTGATCCGTCAAAATTTTGATGGTATGAAAATCGTCAATTTGTATCATTATTTGTGAGTGATTTTGACTCTTAAACGCATTTACAATAAGGTATATATATATTATTATATATGTGATTAGTCTAATTTAACTTGATAAATTTGCAGGAGCTGTTCCAAAGAAAATCCTTGAAGTCATGAATGTGCCTGGTTTGACAAGGGAAAATGTTGCTAGTCATTTGCAG

mRNA sequence

TTGCTTCATTTGTCGACCCGGTTCAAGCTTTGTCCACGCTTCGGGCGGGAAAACAATCTTTTGATCTCATTGTGACAGCTCTCCATATGTCAAAGATGAATGGTTTGGAGTTAACAAAGAGAGTAAATGATGAATTCAAGCTTCCTGTGATTATGATTTCGACCGACAATGAAGAAAGCATCATGTATAGGGCGATACAAGAAGGGGTTGCACTCTACTTAGTGAAACCCTTCTTTCAAAATGACCTAAAAAACATTTGGCAATTTTCCATAACCACCAAATCACAAAGTAAACCAAACCCTAGCTTGACTATTGAAGAGACAATAAGCACCAATTATGGCGAAGGCAAGCTTCAAGCATTTGAAACGCACTCGGTCTCAGGTTCAAATGAAGTAATATCGTCAGAAAGGAAGAAGAAGAAGAGTTCAATAGAAAAGGATCAAGAGAAATCAAATGGTAAAAAGGAAGTGAAGTCTACAAGAAAAAAACCAAAGGTGGTTTGGACAGATTTCCTTCAATATAGATTCTTGCAAGCTGTTCATTTCATTGGCTTGGACAGAGCTGTTCCAAAGAAAATCCTTGAAGTCATGAATGTGCCTGGTTTGACAAGGGAAAATGTTGCTAGTCATTTGCAG

Coding sequence (CDS)

TTGCTTCATTTGTCGACCCGGTTCAAGCTTTGTCCACGCTTCGGGCGGGAAAACAATCTTTTGATCTCATTGTGACAGCTCTCCATATGTCAAAGATGAATGGTTTGGAGTTAACAAAGAGAGTAAATGATGAATTCAAGCTTCCTGTGATTATGATTTCGACCGACAATGAAGAAAGCATCATGTATAGGGCGATACAAGAAGGGGTTGCACTCTACTTAGTGAAACCCTTCTTTCAAAATGACCTAAAAAACATTTGGCAATTTTCCATAACCACCAAATCACAAAGTAAACCAAACCCTAGCTTGACTATTGAAGAGACAATAAGCACCAATTATGGCGAAGGCAAGCTTCAAGCATTTGAAACGCACTCGGTCTCAGGTTCAAATGAAGTAATATCGTCAGAAAGGAAGAAGAAGAAGAGTTCAATAGAAAAGGATCAAGAGAAATCAAATGGTAAAAAGGAAGTGAAGTCTACAAGAAAAAAaCCAAAGGTGGTTTGGACAGATTTCCTTCAATATAGATTCTTGCAAGCTGTTCATTTCATTGGCTTGGACAGAGCTGTTCCAAAGAAAATCCTTGAAGTCATGAATGTGCCTGGTTTGACAAGGGAAAATGTTGCTAGTCATTTGCAG

Protein sequence

ASFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ

Homology

[Close]

BLAST of Cucsa.362450 vs. Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 6.6e-36
Identity = 91/219 (41.55%), Postives = 130/219 (59.36%), Query Frame = 1


Query: 9   ALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQEG 68
           ALS LR  K  FD++++ +HM  M+G +L + V  E  LPVIM+S D+ +S++ + +  G
Sbjct: 72  ALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHG 131

Query: 69  VALYLVKPFFQNDLKNIWQFSITTKSQ--SKPNPSLTIEET--------------ISTNY 128
              YL+KP     LKNIWQ  +  +    S P  S +IEET               + + 
Sbjct: 132 AVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSG 191

Query: 129 GEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQ 188
           GE  +    + SV+  N   SS RK+K    E+ +E+ + K E  S  KKP+VVW+  L 
Sbjct: 192 GEDAVDD-NSSSVNEGNNWRSSSRKRKD---EEGEEQGDDKDEDASNLKKPRVVWSVELH 251

Query: 189 YRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
            +F+ AV+ +G+++AVPKKILE+MNVPGLTRENVASHLQ
Sbjct: 252 QQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQ 286

[Close]

BLAST of Cucsa.362450 vs. Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 82/204 (40.20%), Postives = 123/204 (60.29%), Query Frame = 1


Query: 9   ALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQEG 68
           ALS LR  K  FD++++ +HM  M+G +L + V  E  LPVIM+S D+ +S++ + +  G
Sbjct: 63  ALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHG 122

Query: 69  VALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGE-GKLQAFETHSVSG 128
              YL+KP     LKNIWQ  +  K +++ N S     +I    G+  + Q     + + 
Sbjct: 123 AVDYLIKPVRIEALKNIWQH-VVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNN 182

Query: 129 SNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGLDRA 188
           S+ V     +  +   E++ +     KE  S+ KKP+VVW+  L  +F+ AV+ +G+D+A
Sbjct: 183 SSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKA 242

Query: 189 VPKKILEVMNVPGLTRENVASHLQ 212
           VPKKILE+MNVPGLTRENVASHLQ
Sbjct: 243 VPKKILEMMNVPGLTRENVASHLQ 265

[Close]

BLAST of Cucsa.362450 vs. Swiss-Prot
Match: ORR21_ORYSI (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica GN=RR21 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 86/206 (41.75%), Postives = 127/206 (61.65%), Query Frame = 1


Query: 8   QALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQE 67
           +AL+ LR  ++ FD+I++ +HM  M+G  L + V  E  LPVIM+S D+   I+ + I+ 
Sbjct: 50  RALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKH 109

Query: 68  GVALYLVKPFFQNDLKNIWQFSITTK-SQSKPNP-SLTIEETISTNYGEGKLQAFETHSV 127
           G   YL+KP    +LKNIWQ  I  K +++K +  S ++++T  T       +     S 
Sbjct: 110 GACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEY--ASSA 169

Query: 128 SGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGLD 187
           +   E     +KKK+   + D E  +G  +  ST KKP+VVW+  L  +F+ AV+ +G+D
Sbjct: 170 NDGAEGSWKSQKKKRDKDDDDGELESG--DPSSTSKKPRVVWSVELHQQFVNAVNHLGID 229

Query: 188 RAVPKKILEVMNVPGLTRENVASHLQ 212
           +AVPKKILE+MNVPGLTRENVASHLQ
Sbjct: 230 KAVPKKILELMNVPGLTRENVASHLQ 251

[Close]

BLAST of Cucsa.362450 vs. Swiss-Prot
Match: ORR21_ORYSJ (Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica GN=RR21 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 86/206 (41.75%), Postives = 127/206 (61.65%), Query Frame = 1


Query: 8   QALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQE 67
           +AL+ LR  ++ FD+I++ +HM  M+G  L + V  E  LPVIM+S D+   I+ + I+ 
Sbjct: 50  RALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKH 109

Query: 68  GVALYLVKPFFQNDLKNIWQFSITTK-SQSKPNP-SLTIEETISTNYGEGKLQAFETHSV 127
           G   YL+KP    +LKNIWQ  I  K +++K +  S ++++T  T       +     S 
Sbjct: 110 GACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEY--ASSA 169

Query: 128 SGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGLD 187
           +   E     +KKK+   + D E  +G  +  ST KKP+VVW+  L  +F+ AV+ +G+D
Sbjct: 170 NDGAEGSWKSQKKKRDKDDDDGELESG--DPSSTSKKPRVVWSVELHQQFVNAVNHLGID 229

Query: 188 RAVPKKILEVMNVPGLTRENVASHLQ 212
           +AVPKKILE+MNVPGLTRENVASHLQ
Sbjct: 230 KAVPKKILELMNVPGLTRENVASHLQ 251

[Close]

BLAST of Cucsa.362450 vs. Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-32
Identity = 83/207 (40.10%), Postives = 122/207 (58.94%), Query Frame = 1


Query: 9   ALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVND-EFKLPVIMISTDNEESIMYRAIQE 68
           AL+ LR  K SFDL+++ +HM  MNG  L ++V   E  LPVIM+S D   + +   I  
Sbjct: 46  ALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINH 105

Query: 69  GVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQAFETHSVSG 128
           G   YL+KP    +LKNIWQ  +  K   K    L   + +  N   G L+         
Sbjct: 106 GACDYLIKPIRPEELKNIWQHVVRRKCVMKKE--LRSSQALEDNKNSGSLETVVVSVSEC 165

Query: 129 SNEVIS---SERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGL 188
           S E +    +++KKKK S+++D  + +   +  ++ KK +VVW+  L  +F+ AV+ +G+
Sbjct: 166 SEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNS-KKSRVVWSIELHQQFVNAVNKLGI 225

Query: 189 DRAVPKKILEVMNVPGLTRENVASHLQ 212
           D+AVPK+ILE+MNVPGL+RENVASHLQ
Sbjct: 226 DKAVPKRILELMNVPGLSRENVASHLQ 249

[Close]

BLAST of Cucsa.362450 vs. TrEMBL
Match: A0A0A0KER8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G079210 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-51
Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 1


Query: 102 LTIEETISTNYGEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRK 161
           L + +TISTNYGEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRK
Sbjct: 95  LPVIKTISTNYGEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRK 154

Query: 162 KPKVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           KPKVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ
Sbjct: 155 KPKVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 204

[Close]

BLAST of Cucsa.362450 vs. TrEMBL
Match: A0A0A0KER8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G079210 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-41
Identity = 115/212 (54.25%), Postives = 123/212 (58.02%), Query Frame = 1


Query: 1   ASFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVI-MISTDNEES 60
           ASFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVI  IST+  E 
Sbjct: 49  ASFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIKTISTNYGEG 108

Query: 61  IMYRAIQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQA 120
            +                           +  T S S  N      E IS+   + K   
Sbjct: 109 KLQ--------------------------AFETHSVSGSN------EVISSERKKKKSSI 168

Query: 121 FETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAV 180
            +    S   + + S RKK                         KVVWTDFLQYRFLQAV
Sbjct: 169 EKDQEKSNGKKEVKSTRKKP------------------------KVVWTDFLQYRFLQAV 204

Query: 181 HFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           HFIGLDRAVPKKILEVMNVPGLTRENVASHLQ
Sbjct: 229 HFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 204

HSP 2 Score: 188.3 bits (477), Expect = 9.3e-45
Identity = 99/209 (47.37%), Postives = 146/209 (69.86%), Query Frame = 1


Query: 5   DPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRA 64
           +P+ AL+TLRA K  FDL+VT LHM +MNG EL K V++EFKLPVIM+S D++ES++ ++
Sbjct: 33  NPIDALATLRARKGIFDLVVTDLHMPQMNGFELQKHVHEEFKLPVIMMSADDKESVILKS 92

Query: 65  IQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGE--GKLQAFET 124
           ++ GV  Y+VKP  ++D+KN+WQ+++     +K   S+TIEE I +  GE  G+++   +
Sbjct: 93  LEGGVVYYIVKPVSKDDIKNVWQYAVA----AKKGKSVTIEE-IESAPGEAPGEVEDGSS 152

Query: 125 HSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFI 184
            + S ++E    ++ + K    + + + +  +E     KKPKVVWT+ L  +FL A+  I
Sbjct: 153 ETSSDTDEEKQDKKAEAKVKRARKRHREDDNEERMVAPKKPKVVWTNSLHNQFLLAIRHI 212

Query: 185 GLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           GLD+AVPK+ILE MNVPGLTRENVASHLQ
Sbjct: 213 GLDKAVPKRILEFMNVPGLTRENVASHLQ 236

[Close]

BLAST of Cucsa.362450 vs. TrEMBL
Match: B9ID11_POPTR (Two-component response regulator ARR13 family protein OS=Populus trichocarpa GN=POPTR_0015s13860g PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44
Identity = 103/215 (47.91%), Postives = 148/215 (68.84%), Query Frame = 1


Query: 5   DPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRA 64
           +P  ALSTLR  K  FDL+VT LHM +MNG+EL ++V++EFKLPVI++S+D+ E ++ R 
Sbjct: 57  NPFDALSTLRLKKGLFDLVVTDLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRT 116

Query: 65  IQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTI------EETISTNYGEGKLQ 124
           ++ G A Y+VKP  ++DLKN+WQ+++ TK+      SL+I      +E+ S+   + K+ 
Sbjct: 117 LEGGAAFYIVKPINKDDLKNVWQYAVATKTGKY---SLSIKEIGGSQESSSSTVFDQKIS 176

Query: 125 AFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKS--TRKKPKVVWTDFLQYRFL 184
             E  S   +N  I +E    K  I K+++++   +EV S    KKPKVVWT+ L  RFL
Sbjct: 177 VDEVSSAKSTNIKICNE----KDRINKNRKRTKEDQEVDSQLAPKKPKVVWTNSLHSRFL 236

Query: 185 QAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           QA++ IGLD+AVPK+ILE M+VPGL+RENVASHLQ
Sbjct: 237 QAINHIGLDKAVPKRILEFMSVPGLSRENVASHLQ 264

[Close]

BLAST of Cucsa.362450 vs. TrEMBL
Match: V4S898_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10006834mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.6e-43
Identity = 100/210 (47.62%), Postives = 142/210 (67.62%), Query Frame = 1


Query: 6   PVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFK-LPVIMISTDNEESIMYRA 65
           PV+AL+T+R  ++  DL+VT LHM +MNG+EL K +N+EF  LPV+++S+D+ ES++ +A
Sbjct: 6   PVEALATVRI-QRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKA 65

Query: 66  IQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETIS---TNYGEGKLQAFE 125
           +  GVA Y++KP   +DLKN+WQ+++T K       S++I+E  S     +  GK    +
Sbjct: 66  LASGVAFYILKPLNPDDLKNVWQYAMTYKKAK----SISIDEIGSFELAGFSAGKFSLDD 125

Query: 126 THSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHF 185
             S S  NE   + +  K+ + +KD+ K    K+  +  KKPKV WTD L  RFLQA+  
Sbjct: 126 IVSRSSVNERNKNNKDSKRKASKKDKGKQT--KQNATAPKKPKVAWTDSLHNRFLQAIRH 185

Query: 186 IGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           IGL++AVPKKILE MNVPGLTRENVASHLQ
Sbjct: 186 IGLEKAVPKKILEFMNVPGLTRENVASHLQ 208

[Close]

BLAST of Cucsa.362450 vs. TrEMBL
Match: A0A067EY80_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043479mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.6e-43
Identity = 100/210 (47.62%), Postives = 142/210 (67.62%), Query Frame = 1


Query: 6   PVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFK-LPVIMISTDNEESIMYRA 65
           PV+AL+T+R  ++  DL+VT LHM +MNG+EL K +N+EF  LPV+++S+D+ ES++ +A
Sbjct: 6   PVEALATVRI-QRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKA 65

Query: 66  IQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETIS---TNYGEGKLQAFE 125
           +  GVA Y++KP   +DLKN+WQ+++T K       S++I+E  S     +  GK    +
Sbjct: 66  LASGVAFYILKPLNPDDLKNVWQYAMTYKKAK----SISIDEIGSFELAGFSAGKFSLDD 125

Query: 126 THSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHF 185
             S S  NE   + +  K+ + +KD+ K    K+  +  KKPKV WTD L  RFLQA+  
Sbjct: 126 IVSRSSVNERNKNNKDSKRKASKKDKGKQT--KQNATAPKKPKVAWTDSLHNRFLQAIRH 185

Query: 186 IGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           IGL++AVPKKILE MNVPGLTRENVASHLQ
Sbjct: 186 IGLEKAVPKKILEFMNVPGLTRENVASHLQ 208

[Close]

BLAST of Cucsa.362450 vs. TAIR10
Match: AT3G16857.2 (AT3G16857.2 response regulator 1)

HSP 1 Score: 152.1 bits (383), Expect = 3.7e-37
Identity = 91/219 (41.55%), Postives = 130/219 (59.36%), Query Frame = 1


Query: 9   ALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQEG 68
           ALS LR  K  FD++++ +HM  M+G +L + V  E  LPVIM+S D+ +S++ + +  G
Sbjct: 72  ALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHG 131

Query: 69  VALYLVKPFFQNDLKNIWQFSITTKSQ--SKPNPSLTIEET--------------ISTNY 128
              YL+KP     LKNIWQ  +  +    S P  S +IEET               + + 
Sbjct: 132 AVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSG 191

Query: 129 GEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQ 188
           GE  +    + SV+  N   SS RK+K    E+ +E+ + K E  S  KKP+VVW+  L 
Sbjct: 192 GEDAVDD-NSSSVNEGNNWRSSSRKRKD---EEGEEQGDDKDEDASNLKKPRVVWSVELH 251

Query: 189 YRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
            +F+ AV+ +G+++AVPKKILE+MNVPGLTRENVASHLQ
Sbjct: 252 QQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQ 286

[Close]

BLAST of Cucsa.362450 vs. TAIR10
Match: AT4G16110.1 (AT4G16110.1 response regulator 2)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 82/204 (40.20%), Postives = 123/204 (60.29%), Query Frame = 1


Query: 9   ALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQEG 68
           ALS LR  K  FD++++ +HM  M+G +L + V  E  LPVIM+S D+ +S++ + +  G
Sbjct: 63  ALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHG 122

Query: 69  VALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGE-GKLQAFETHSVSG 128
              YL+KP     LKNIWQ  +  K +++ N S     +I    G+  + Q     + + 
Sbjct: 123 AVDYLIKPVRIEALKNIWQH-VVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNN 182

Query: 129 SNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGLDRA 188
           S+ V     +  +   E++ +     KE  S+ KKP+VVW+  L  +F+ AV+ +G+D+A
Sbjct: 183 SSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKA 242

Query: 189 VPKKILEVMNVPGLTRENVASHLQ 212
           VPKKILE+MNVPGLTRENVASHLQ
Sbjct: 243 VPKKILEMMNVPGLTRENVASHLQ 265

[Close]

BLAST of Cucsa.362450 vs. TAIR10
Match: AT2G01760.1 (AT2G01760.1 response regulator 14)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33
Identity = 83/207 (40.10%), Postives = 122/207 (58.94%), Query Frame = 1


Query: 9   ALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVND-EFKLPVIMISTDNEESIMYRAIQE 68
           AL+ LR  K SFDL+++ +HM  MNG  L ++V   E  LPVIM+S D   + +   I  
Sbjct: 46  ALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINH 105

Query: 69  GVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQAFETHSVSG 128
           G   YL+KP    +LKNIWQ  +  K   K    L   + +  N   G L+         
Sbjct: 106 GACDYLIKPIRPEELKNIWQHVVRRKCVMKKE--LRSSQALEDNKNSGSLETVVVSVSEC 165

Query: 129 SNEVIS---SERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGL 188
           S E +    +++KKKK S+++D  + +   +  ++ KK +VVW+  L  +F+ AV+ +G+
Sbjct: 166 SEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNS-KKSRVVWSIELHQQFVNAVNKLGI 225

Query: 189 DRAVPKKILEVMNVPGLTRENVASHLQ 212
           D+AVPK+ILE+MNVPGL+RENVASHLQ
Sbjct: 226 DKAVPKRILELMNVPGLSRENVASHLQ 249

[Close]

BLAST of Cucsa.362450 vs. TAIR10
Match: AT4G31920.1 (AT4G31920.1 response regulator 10)

HSP 1 Score: 134.8 bits (338), Expect = 6.2e-32
Identity = 77/203 (37.93%), Postives = 115/203 (56.65%), Query Frame = 1


Query: 9   ALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQEG 68
           AL  LR  K  FDL+++ + M  M+G +L + V  E  LPVIM+S  ++   + + ++ G
Sbjct: 52  ALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHG 111

Query: 69  VALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQAFETHSVSGS 128
              YL+KP    +LKNIWQ  +  KS+ K N S                     +  +GS
Sbjct: 112 ACDYLLKPVRIEELKNIWQH-VVRKSKLKKNKS---------------------NVSNGS 171

Query: 129 NEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGLDRAV 188
                + RK+K+   E+++E+     +  + +KKP+V+WT  L  +FL AV  +G++RAV
Sbjct: 172 GNCDKANRKRKEQYEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAV 231

Query: 189 PKKILEVMNVPGLTRENVASHLQ 212
           PKKIL++MNV  LTRENVASHLQ
Sbjct: 232 PKKILDLMNVDKLTRENVASHLQ 232

[Close]

BLAST of Cucsa.362450 vs. TAIR10
Match: AT2G25180.1 (AT2G25180.1 response regulator 12)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-29
Identity = 69/204 (33.82%), Postives = 111/204 (54.41%), Query Frame = 1


Query: 8   QALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRAIQE 67
           +AL  LR  K  FDL+++ + M  M+G +L + V  E  LPVIM+S  ++   + + +  
Sbjct: 51  KALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTH 110

Query: 68  GVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQAFETHSVSG 127
           G   YL+KP    +LKNIWQ  + ++           ++   +N    K        V  
Sbjct: 111 GACDYLLKPVRIEELKNIWQHVVRSR----------FDKNRGSNNNGDKRDGSGNEGVGN 170

Query: 128 SNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFIGLDRA 187
           S++      +K+K    +D+++     +    +KK +VVWT  L  +F+ AV+ +G ++A
Sbjct: 171 SDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKA 230

Query: 188 VPKKILEVMNVPGLTRENVASHLQ 212
           +PKKIL++MNV  LTRENVASHLQ
Sbjct: 231 MPKKILDLMNVEKLTRENVASHLQ 244

[Close]

BLAST of Cucsa.362450 vs. NCBI nr
Match: gi|700191072|gb|KGN46276.1| (hypothetical protein Csa_6G079210 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 2.5e-51
Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 1


Query: 102 LTIEETISTNYGEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRK 161
           L + +TISTNYGEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRK
Sbjct: 95  LPVIKTISTNYGEGKLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRK 154

Query: 162 KPKVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           KPKVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ
Sbjct: 155 KPKVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 204

[Close]

BLAST of Cucsa.362450 vs. NCBI nr
Match: gi|700191072|gb|KGN46276.1| (hypothetical protein Csa_6G079210 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 5.2e-41
Identity = 115/212 (54.25%), Postives = 123/212 (58.02%), Query Frame = 1


Query: 1   ASFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVI-MISTDNEES 60
           ASFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVI  IST+  E 
Sbjct: 49  ASFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIKTISTNYGEG 108

Query: 61  IMYRAIQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQA 120
            +                           +  T S S  N      E IS+   + K   
Sbjct: 109 KLQ--------------------------AFETHSVSGSN------EVISSERKKKKSSI 168

Query: 121 FETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAV 180
            +    S   + + S RKK                         KVVWTDFLQYRFLQAV
Sbjct: 169 EKDQEKSNGKKEVKSTRKKP------------------------KVVWTDFLQYRFLQAV 204

Query: 181 HFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           HFIGLDRAVPKKILEVMNVPGLTRENVASHLQ
Sbjct: 229 HFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 204

HSP 2 Score: 191.0 bits (484), Expect = 2.1e-45
Identity = 100/209 (47.85%), Postives = 147/209 (70.33%), Query Frame = 1


Query: 5   DPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRA 64
           +P+ AL+TLRA K  FDL+VT LHM +MNG EL K V++EFKLPVIM+S D++ES++ ++
Sbjct: 56  NPIDALATLRARKGIFDLVVTDLHMPQMNGFELQKHVHEEFKLPVIMMSADDKESVILKS 115

Query: 65  IQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQAFETHS 124
           ++ GV  Y+VKP  ++D+KN+WQ+++     +K   S+TIEE I +  GE   +  +  S
Sbjct: 116 LEGGVVYYIVKPVSKDDIKNVWQYAVA----AKKGKSVTIEE-IESAPGEAPGEVEDGSS 175

Query: 125 VSGSNEVISSERKKKKSSIEKDQE--KSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFI 184
            + S+     + KK ++ ++K+++  + +  +E     KKPKVVWT+ L  +FL A+  I
Sbjct: 176 ETSSDTDEEKQEKKAEAKVKKERKRHREDDNEERMVAPKKPKVVWTNSLHNQFLLAIRHI 235

Query: 185 GLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           GLD+AVPK+ILE MNVPGLTRENVASHLQ
Sbjct: 236 GLDKAVPKRILEFMNVPGLTRENVASHLQ 259

[Close]

BLAST of Cucsa.362450 vs. NCBI nr
Match: gi|694391651|ref|XP_009371337.1| (PREDICTED: myb-like protein M [Pyrus x bretschneideri])

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44
Identity = 104/215 (48.37%), Postives = 141/215 (65.58%), Query Frame = 1


Query: 5   DPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRA 64
           +P+ AL+TLR  K +FDL+VT LHM +M+G EL K V DEFKLPVIM+S D+ ES++ ++
Sbjct: 4   NPIDALATLREQKGAFDLVVTDLHMPEMDGFELQKHVRDEFKLPVIMMSADDNESVILKS 63

Query: 65  IQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGEGKLQAFETHS 124
           ++ GVA Y+VKP  ++D+KN+WQ+++     +K   S+ I E       EG  +      
Sbjct: 64  LEGGVAYYIVKPVSKDDIKNVWQYTVA----AKKGKSVVIGEI------EGAPREAPGEV 123

Query: 125 VSGSNEVISS----ERKKKKSSIEKDQEKSNGKKEVKSTR----KKPKVVWTDFLQYRFL 184
             GSN  ISS    E+ KKK+ ++  + K  G+++    R    KKPKVVW + L Y+FL
Sbjct: 124 DDGSNSEISSDANEEQHKKKAEVKTKKAKKRGREDDNEERMVAPKKPKVVWINSLHYQFL 183

Query: 185 QAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
            A+  IGLDRAVPK ILE MNVPGLTR NVASHLQ
Sbjct: 184 LAIRHIGLDRAVPKNILEFMNVPGLTRANVASHLQ 208

[Close]

BLAST of Cucsa.362450 vs. NCBI nr
Match: gi|596053083|ref|XP_007220738.1| (hypothetical protein PRUPE_ppa023185mg, partial [Prunus persica])

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 99/209 (47.37%), Postives = 146/209 (69.86%), Query Frame = 1


Query: 5   DPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIMYRA 64
           +P+ AL+TLRA K  FDL+VT LHM +MNG EL K V++EFKLPVIM+S D++ES++ ++
Sbjct: 33  NPIDALATLRARKGIFDLVVTDLHMPQMNGFELQKHVHEEFKLPVIMMSADDKESVILKS 92

Query: 65  IQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTIEETISTNYGE--GKLQAFET 124
           ++ GV  Y+VKP  ++D+KN+WQ+++     +K   S+TIEE I +  GE  G+++   +
Sbjct: 93  LEGGVVYYIVKPVSKDDIKNVWQYAVA----AKKGKSVTIEE-IESAPGEAPGEVEDGSS 152

Query: 125 HSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKSTRKKPKVVWTDFLQYRFLQAVHFI 184
            + S ++E    ++ + K    + + + +  +E     KKPKVVWT+ L  +FL A+  I
Sbjct: 153 ETSSDTDEEKQDKKAEAKVKRARKRHREDDNEERMVAPKKPKVVWTNSLHNQFLLAIRHI 212

Query: 185 GLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           GLD+AVPK+ILE MNVPGLTRENVASHLQ
Sbjct: 213 GLDKAVPKRILEFMNVPGLTRENVASHLQ 236

[Close]

BLAST of Cucsa.362450 vs. NCBI nr
Match: gi|743896731|ref|XP_011041635.1| (PREDICTED: two-component response regulator ARR1 [Populus euphratica])

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 102/218 (46.79%), Postives = 150/218 (68.81%), Query Frame = 1


Query: 2   SFVDPVQALSTLRAGKQSFDLIVTALHMSKMNGLELTKRVNDEFKLPVIMISTDNEESIM 61
           S  +P  ALSTLR  K  FDL+VT LHM +MNG+EL  +V++EFKLPVI++S+D+ E ++
Sbjct: 54  SVKNPFDALSTLRLKKGVFDLVVTDLHMPEMNGMELQHQVDEEFKLPVIIMSSDDSEKVI 113

Query: 62  YRAIQEGVALYLVKPFFQNDLKNIWQFSITTKSQSKPNPSLTI------EETISTNYGEG 121
            RA++ G A Y+VKP  ++DLKN+WQ+++ TK   +   SL+I      +E+ S+   + 
Sbjct: 114 LRALEGGAAFYIVKPINKDDLKNVWQYAVATK---RGKCSLSIKEIGGSQESSSSTLFDQ 173

Query: 122 KLQAFETHSVSGSNEVISSERKKKKSSIEKDQEKSNGKKEVKS--TRKKPKVVWTDFLQY 181
           K+   E +S   +N  I +E+ +K     K+++++   +EV S    K+PKV+WT  L  
Sbjct: 174 KISVDEVNSAKSTNNKICNEKDRK----NKNRKRTKEDQEVDSQLAPKRPKVLWTSSLHS 233

Query: 182 RFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ 212
           RFLQA++ IGLD+AVPK+ILE M+VPGL+RENVASHLQ
Sbjct: 234 RFLQAINHIGLDKAVPKRILEFMSVPGLSRENVASHLQ 264

The following BLAST results are available for this feature:

BLAST of Cucsa.362450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARR1_ARATH	6.6e-36	41.55	Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2	[more]
ARR2_ARATH	2.1e-34	40.20	Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1	[more]
ORR21_ORYSI	2.8e-34	41.75	Two-component response regulator ORR21 OS=Oryza sativa subsp. indica GN=RR21 PE=...	[more]
ORR21_ORYSJ	2.8e-34	41.75	Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica GN=RR21 P...	[more]
ARR14_ARATH	2.0e-32	40.10	Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=...	[more]

BLAST of Cucsa.362450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KER8_CUCSA	1.7e-51	96.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G079210 PE=4 SV=1	[more]
A0A0A0KER8_CUCSA	3.6e-41	54.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G079210 PE=4 SV=1	[more]
B9ID11_POPTR	1.2e-44	47.91	Two-component response regulator ARR13 family protein OS=Populus trichocarpa GN=...	[more]
V4S898_9ROSI	6.6e-43	47.62	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10006834mg PE=...	[more]
A0A067EY80_CITSI	6.6e-43	47.62	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043479mg PE=4 S...	[more]

BLAST of Cucsa.362450 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16857.2	3.7e-37	41.55	response regulator 1	[more]
AT4G16110.1	1.2e-35	40.20	response regulator 2	[more]
AT2G01760.1	1.1e-33	40.10	response regulator 14	[more]
AT4G31920.1	6.2e-32	37.93	response regulator 10	[more]
AT2G25180.1	2.2e-29	33.82	response regulator 12	[more]

BLAST of Cucsa.362450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191072\|gb\|KGN46276.1\|	2.5e-51	96.36	hypothetical protein Csa_6G079210 [Cucumis sativus]	[more]
gi\|700191072\|gb\|KGN46276.1\|	5.2e-41	54.25	hypothetical protein Csa_6G079210 [Cucumis sativus]	[more]
gi\|694391651\|ref\|XP_009371337.1\|	1.0e-44	48.37	PREDICTED: myb-like protein M [Pyrus x bretschneideri]	[more]
gi\|596053083\|ref\|XP_007220738.1\|	1.3e-44	47.37	hypothetical protein PRUPE_ppa023185mg, partial [Prunus persica]	[more]
gi\|743896731\|ref\|XP_011041635.1\|	1.3e-44	46.79	PREDICTED: two-component response regulator ARR1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.362450.1	Cucsa.362450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 3..84 score: 3.6
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 1..90 score: 25
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 162..211 score: 5.4
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 160..211 score: 4.1
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 159..211 score: 8.24
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 3..102 score: 6.97
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 5..97 score: 2.0E-19coord: 137..154 score: 2.0
None	No IPR available	PANTHER	PTHR26402	RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM	coord: 6..211 score: 4.5
None	No IPR available	PANTHER	PTHR26402:SF508	SUBFAMILY NOT NAMED	coord: 6..211 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.362450	Cla006991	Watermelon (97103) v1	cgywmB666
Cucsa.362450	Csa6G079210	Cucumber (Chinese Long) v2	cgycuB511
Cucsa.362450	MELO3C022469	Melon (DHL92) v3.5.1	cgymeB586
Cucsa.362450	ClCG06G000720	Watermelon (Charleston Gray)	cgywcgB620
Cucsa.362450	CSPI06G06180	Wild cucumber (PI 183967)	cgycpiB540
Cucsa.362450	CmaCh08G009790	Cucurbita maxima (Rimu)	cgycmaB1008
Cucsa.362450	CmoCh08G009470	Cucurbita moschata (Rifu)	cgycmoB1008
Cucsa.362450	Lsi09G018710	Bottle gourd (USVL1VR-Ls)	cgylsiB583
Cucsa.362450	MELO3C022469.2	Melon (DHL92) v3.6.1	cgymedB586
Cucsa.362450	CsaV3_6G006510	Cucumber (Chinese Long) v3	cgycucB556
Cucsa.362450	Cla97C06G109970	Watermelon (97103) v2	cgywmbB625
Cucsa.362450	Bhi12G002245	Wax gourd	cgywgoB724

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.362450	Cucurbita pepo (Zucchini)	cgycpeB0947
Cucsa.362450	Cucurbita pepo (Zucchini)	cgycpeB0960
Cucsa.362450	Cucurbita pepo (Zucchini)	cgycpeB0965
Cucsa.362450	Cucurbita pepo (Zucchini)	cgycpeB0969
Cucsa.362450	Bottle gourd (USVL1VR-Ls)	cgylsiB585
Cucsa.362450	Melon (DHL92) v3.6.1	cgymedB592
Cucsa.362450	Silver-seed gourd	carcgyB0271
Cucsa.362450	Silver-seed gourd	carcgyB0695
Cucsa.362450	Silver-seed gourd	carcgyB1079
Cucsa.362450	Silver-seed gourd	carcgyB1194
Cucsa.362450	Cucumber (Chinese Long) v3	cgycucB553
Cucsa.362450	Watermelon (97103) v2	cgywmbB622
Cucsa.362450	Wax gourd	cgywgoB728
Cucsa.362450	Cucumber (Gy14) v1	cgycgyB130
Cucsa.362450	Cucurbita maxima (Rimu)	cgycmaB0990
Cucsa.362450	Cucurbita maxima (Rimu)	cgycmaB0998
Cucsa.362450	Cucurbita maxima (Rimu)	cgycmaB1007
Cucsa.362450	Cucurbita moschata (Rifu)	cgycmoB0992
Cucsa.362450	Cucurbita moschata (Rifu)	cgycmoB1007
Cucsa.362450	Cucurbita moschata (Rifu)	cgycmoB0999
Cucsa.362450	Wild cucumber (PI 183967)	cgycpiB537
Cucsa.362450	Cucumber (Chinese Long) v2	cgycuB509
Cucsa.362450	Melon (DHL92) v3.5.1	cgymeB594
Cucsa.362450	Watermelon (Charleston Gray)	cgywcgB617
Cucsa.362450	Watermelon (97103) v1	cgywmB663