CSPI06G05990 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G05990
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionSyntaxin, putative
LocationChr6 : 5296104 .. 5300004 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAAAATACAAAAATAAGATAAAATTGAAAAGGAAATTGGAATTCAGTGCACAGGTCGTTGCGCGCTCCAGCATCGATCCCAACATCCATCGCTACGCCCCGTGGCCCTCTTCCTTCACTCTCAACCACCATTCACCTTGTTCTTCCTCAGATCTACACTCTCCGTCGCCCTCACTCTCAGGTTTTCTTCTCTTCTTTCTCCCACATCAGTTTCAGAGTGATTTATTCTGTATCCACAGATATTCTGAACGCCGATTATCGCTTCGTATCTCGTTATTGTTCGTATTTGTTTTCAGTTAACTGATTAACCTCCAATTCTAGATCTGGCGTAGTGATATAGATGTTTTTCTGCTAATTTACGATTTATGATCTCAGCATGTTAATTGAAGAATACTTTATGCTAATTTTGTGTTTAAATTGGAGTGGAACGAACTCGGGAATGAAATTGAGCTGACTAGAGGGAACATCGAGTTCTGGAAGTGATTGTGTTCTTTTCCGTTATTGCAGTTGAAGATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTGTAAGTTGATTGCTTGCATTCACTTATTACTATCTATGGTGCTTGGATTATGTTCACTGATGGCATTTAAATTAAGCTTCTCTGAACCGCGTCATCCTTTTTCTGCAACAATGAATTGTTGTTAATAGAAAATGAGTGTGAATTAGAACAGGGAAACTGGAGAGTGGTGATAGCGATTAGGTTTGCAGCTGTATTCGCTTGTTTCAAAATGAATCAATCTCAACCAACGAGACGTATTGAGCTATTATACAAAAATGTGAAAATATAATTCCAACTCTAACTGAAATCTCCAAACAATGTGGACAGTTAATGCACATTAAACCAGTTTATAGCAACTGTCAATGATCGTATTCTATTCTTCGGTAGACAACAAATATAATTGCTGTAATGTTACCTTCTTCTTTCCAAAGGCAACTGCTGTAAATTGAACCTTCTCGTTTCCCCAGATGGCTTCTTGTTGATTATGATGAGATTTTCCTATCTCCCAAAACCTGTCCTTTCCTTTGTATCTTGTATTTCTGTCTCCACCAATATTCTTTGTGATGATAACCATCAGCCAAGAATACAGTGTTCCATCTGAAAAGTTCATCTTCAAGTTCAAATTGTAAGCAGTCGATCTTGACATCTCAGTACCCAGCACTCTTTGAACTGGGATCTTAGTTATAGTAGACTTTATGTAGCTTATGATTTGAAGGTCTGGTTATGCGTCATTGTCGAGAACAATTGAACGACTCATTGTTAGCATGTTCTACATTTTCTTGGTCAAATATCGATGAATGAATATTACTTGTTTCTGATGAAAGTATGATTAGATTCCTCAAAATAAATAATTAGAAGATTGTAAGATCTGCATGTTCCAGCTTATTTACTTCAAATTGTGGAATCCTAGAAGTAAAACTGATGTTGGAAGTTTGCTGACTTGGTTCTGACTTCCTATTGTGTTGATTTATTTACATTGGTCCTTCCAACCTTACCAAAACTATTTTGTTGGAAAAATTCCAGTACTATGCTAAACAAATGACTAAAGTCTTAATATTTCGGGCCCTTGCATGCTTCTCTAGAAATTATTTTTGGTTGCAAATAATTTATGTAGCAATGACATTTTGTTTCTAAAGTCAATGTTGATTTTGCTACTTTTTCTGGCTATATCTGCGTTTTCTCATAGTGTATTTTTCATCTGCACCAGATCGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCTGGAGAGAGAGTACAACAAACGAAAGAGTTGCTCGCTTCATGTGAAAGCATTGAGTGGCAGGGAATTCTTAATTTATAAATCATGCTGTCTGCTACATTTGTTGTGAAACTTCTATTTTTCTTTTTTCCTTTTAATTTTTTATTTTATCGATGAGATCGGATATCACTTTTTTCTGGGGTTTCAGTGTGTGTCTAAGCATTGTGCATCCAATATATGCTTTGTCTGAAACTTTGCTTTCTTGATAGGAAGGTGGATGAACTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATAATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACAGCTAGGACGCAGGTATTGCTCGTCTGACCCTGTTTTCTTTTGTGTCAACAGATTGAATAAAGAAATAAACAAGTTGGTAATCCTTGTTTCTCCCATATAGTTATTGCATGTTCATCTTGTAGTCCTTTTTTTTTTTTTACTTCTTTAGGTTGGCAATGTTAAGAAAGTAGTAGGAGCCGGCAAGGAGCAAATAGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGATAGATCAAACTTATATTCAGCCCACCAAGCAAATGATGACTTCATCACATCCGAATCAGACAGACAGCTGCTTCTAATAAAGTAATGTGTATATTTCTCAACTCGGCTGTTAAATGAATCCTCCTGCTTAAGCAAAAAGTAGAAACCTATTGCTAAACTTAATAAGATTCCATAATAACAGAATAAAATGAGAGATGTCATTGTTTATTTGCAGTTTTCCATCTCAAACCTGGGTATTCTGAGGAAATTAGTCTTTCACTAATGTGAAGTAGATTACTTGTAACTCACCCGGATTTTATTCCCCTGTCAAATGTATATATAGGCAGCAGGACGAAGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACACGAAGAGCTCCTTGCACAGGTGTATATTTCATAGGTTGTGGTGCTGCTTATTGATTCTCCTATGCATCTGCAATCTGATGGAGTTTTTTAAACTAAAAAAAATTGTGCAGGACAAAATTATTGACGACCTAGGAATGGAAATGGACAGTACTTCAAATCGTCTTGATTTTGTACAGGTGTGTTCATGATCTCAGTGATTGCCATATGCACAAAATTTGGCTTCAGGTTCACAATAATAAGATACTGATATTCTGAAGACTTTAGCAGTAATCAATGGGTTTTCCTTTTTCTTTTTTTGGATTTAAAATCTCATTTTAGTCCCTGTCCCTTAACTGTCAAACTTATTCTGTTCTGGTCTCTAGAATTTAAAAATGTTTATTTTTATCACTCAACCTCCAAATTTATTCTATTTAGGTCCCTAAACTTTCAATTGGTCTTTGAACTTTAAATAAAACAATTATTTTCGTCTTTACACTTCATTTTTTTAACAAACTAATGACATAGTTTTGACTTTTGAGTGTGTGTACTAGCATGCTGATACGAACATTAGCCTACAGGTTAGAGACAATTGTATATGAGATGGAAAAGTAATATAGCACGGATGAAAATGATTCTTTTGATTGTTGTTTTGAAGTTCTGAGACCAGAATAGACTGAATGTCTTGTGAACTATTTATATAACAAACTTGAAAATTTCGTAACCAAGATGGTTCTCAACCCCCCCACCCCCTGTTAAGAGAAGTAAATGCAAGATATAAACTTCAATTTCTTGTTCTTGTATTGAACTTGAACCTTACAGAAAAAAGTAGCTGTGGTCATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTGTTTTTGGTGGCTTTGTTCATCATTCTTTTTGTGTTGGTCTTCCTCACCTAAAGTCATGCCCCATCCATCCATACTTCACAAGGCATCAGAAAATGGATTCGTTTGATTCGAGAAATTTTGAACTGAGAACTACAAAGAGGGGTCCTTCATGTACTTATGAGAATTCCAGAACCTAGCTGCTTCTATATTACAAAATGCAATGTGAAACTCGTTCACTTATTCATTATTTGT

mRNA sequence

ATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTATCGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCTGGAGAGAGAGTACAACAAACGAAAGAGTTGCTCGCTTCATGTGAAAGCATTGAGTGGAAGGTGGATGAACTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATAATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACAGCTAGGACGCAGGTTGGCAATGTTAAGAAAGTAGTAGGAGCCGGCAAGGAGCAAATAGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGATAGATCAAACTTATATTCAGCCCACCAAGCAAATGATGACTTCATCACATCCGAATCAGACAGACAGCTGCTTCTAATAAAGCAGCAGGACGAAGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACACGAAGAGCTCCTTGCACAGGTGTATATTTCATAG

Coding sequence (CDS)

ATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTATCGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCTGGAGAGAGAGTACAACAAACGAAAGAGTTGCTCGCTTCATGTGAAAGCATTGAGTGGAAGGTGGATGAACTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATAATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACAGCTAGGACGCAGGTTGGCAATGTTAAGAAAGTAGTAGGAGCCGGCAAGGAGCAAATAGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGATAGATCAAACTTATATTCAGCCCACCAAGCAAATGATGACTTCATCACATCCGAATCAGACAGACAGCTGCTTCTAATAAAGCAGCAGGACGAAGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACACGAAGAGCTCCTTGCACAGGTGTATATTTCATAG
Homology
[Close]
BLAST of CSPI06G05990 vs. Swiss-Prot
Match: SYP61_ARATH (Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.7e-67
Identity = 131/188 (69.68%), Postives = 153/188 (81.38%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           M SAQDPFY+VK+EIQ+SIDKLQS+FH+WERIS D G++    KEL+A+C SIEW+VDEL
Sbjct: 1   MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           +KAI VAA+DPSWYGID AELEKRRRWTS ARTQV NVK  V AGK   G   AS +RRE
Sbjct: 61  EKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMR+PN+ E  R + Y     +D F+ SESDRQ+LLIKQQDEELDELS SV+RIGGVGLT
Sbjct: 121 LMRMPNSGEASRYDQYGGRD-DDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLT 180

Query: 181 IHEELLAQ 189
           IH+EL+AQ
Sbjct: 181 IHDELVAQ 187

[Close]
BLAST of CSPI06G05990 vs. Swiss-Prot
Match: STX6_PONAB (Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-14
Identity = 54/198 (27.27%), Postives = 98/198 (49.49%), Query Frame = 1 

Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQ-----TKELLASCESIEWKV 62
           S +DPF+VVK E+Q++++  Q  F +W  +  D     ++     T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGM 122
           ++LD+ I++   +P  + +D  EL  R+ + ++ R       +VV   K+Q+ T+S   +
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTR-------QVVRDMKDQMSTSSVQAL 121

Query: 123 RRELMRLPNAHETDRSNLYSA------------HQANDDFITSESDRQLLLIKQQDEELD 177
                R     ++   N  +              +AN  FI  +  +Q L+++QQDE+L+
Sbjct: 122 AERKNRQALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLE 181

[Close]
BLAST of CSPI06G05990 vs. Swiss-Prot
Match: STX6_HUMAN (Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-14
Identity = 54/198 (27.27%), Postives = 98/198 (49.49%), Query Frame = 1 

Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQ-----TKELLASCESIEWKV 62
           S +DPF+VVK E+Q++++  Q  F +W  +  D     ++     T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGM 122
           ++LD+ I++   +P  + +D  EL  R+ + ++ R       +VV   K+Q+ T+S   +
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTR-------QVVRDMKDQMSTSSVQAL 121

Query: 123 RRELMRLPNAHETDRSNLYSA------------HQANDDFITSESDRQLLLIKQQDEELD 177
                R     ++   N  +              +AN  FI  +  +Q L+++QQDE+L+
Sbjct: 122 AERKNRQALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLE 181

[Close]
BLAST of CSPI06G05990 vs. Swiss-Prot
Match: STX6_RAT (Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-13
Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 1 

Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERI----SSDSGERVQ-QTKELLASCESIEWKV 62
           S +DPF+VVK E+Q++++  Q  F +W  +    S+ + E +   T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGM 122
           ++LD+ I++   +P  + +D  EL  R+ + ++ R  V ++K  + A   Q   A A   
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSASSVQ---ALAERK 121

Query: 123 RRELMRLPNAHE------TDRSNLY--SAHQANDDFITSESDRQLLLIKQQDEELDELSA 177
            R+ +   ++ +      TDR          AN  FI  +  +Q L+++QQDE+L+ +S 
Sbjct: 122 NRQALLGDSSSQNWDAGVTDRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSG 181

[Close]
BLAST of CSPI06G05990 vs. Swiss-Prot
Match: STX6_MOUSE (Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-13
Identity = 58/194 (29.90%), Postives = 100/194 (51.55%), Query Frame = 1 

Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERI----SSDSGERVQ-QTKELLASCESIEWKV 62
           S +DPF+VVK E+Q++++  Q  F +W  +    S+ + E +   T EL  +  SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGM 122
           ++LD+ I++   +P  + +D  EL  R+ + ++ R  V ++K  + A   Q   A A   
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSASSVQ---ALAERK 121

Query: 123 RRELM------RLPNAHETDRSNLY--SAHQANDDFITSESDRQLLLIKQQDEELDELSA 177
            R+ +      +  NA   DR          AN  FI  +  +Q L+++QQDE+L+ +S 
Sbjct: 122 NRQALLGDSSSQSWNAGVADRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSG 181

[Close]
BLAST of CSPI06G05990 vs. TrEMBL
Match: A0A0A0KBM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G078000 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 5.4e-100
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEW+VDEL
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE
Sbjct: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELLAQVYIS 193
           IHEELLAQVYIS
Sbjct: 181 IHEELLAQVYIS 192

[Close]
BLAST of CSPI06G05990 vs. TrEMBL
Match: B9H2P0_POPTR (Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0004s05020g PE=4 SV=2)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-79
Identity = 159/190 (83.68%), Postives = 174/190 (91.58%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           M SAQDPFY+VK+EIQESIDKLQSSFHQWERISSDSGE+V+ TKELLA+CESIEW+VDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKE--QIGTASASGMR 120
           DKAI+VAARDPSWYGID AELEKRRRWTSTARTQVGNVKK V AGKE    GTAS +GMR
Sbjct: 61  DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR 120

Query: 121 RELMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVG 180
           RELMR+P+A +TD+SN Y+  Q NDDFI SESDRQ+LLIKQQD+ELDELSASVERIGGVG
Sbjct: 121 RELMRMPDAQQTDKSNQYT--QDNDDFIQSESDRQMLLIKQQDDELDELSASVERIGGVG 180

Query: 181 LTIHEELLAQ 189
           LTIHEELLAQ
Sbjct: 181 LTIHEELLAQ 188

[Close]
BLAST of CSPI06G05990 vs. TrEMBL
Match: M5WIL7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010587mg PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.8e-78
Identity = 156/188 (82.98%), Postives = 170/188 (90.43%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           MPSAQDPFYVVK+EIQESIDKLQSSFHQWERISSD+GE++  TKEL+A+C SI+W+VDEL
Sbjct: 1   MPSAQDPFYVVKEEIQESIDKLQSSFHQWERISSDTGEQLHLTKELIATCGSIDWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           DKAI+VAARDP+WYGID  ELEKRRRWTSTAR QVG VKK V AGK+  GT S +GMRRE
Sbjct: 61  DKAISVAARDPTWYGIDEVELEKRRRWTSTARAQVGAVKKAVEAGKDSTGT-SVNGMRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMRL N+ ETDRSN Y+A Q NDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLANSQETDRSNQYAA-QHNDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELLAQ 189
           IHEELLAQ
Sbjct: 181 IHEELLAQ 186

[Close]
BLAST of CSPI06G05990 vs. TrEMBL
Match: A0A061GE34_THECC (Syntaxin of plants 61 OS=Theobroma cacao GN=TCM_029787 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 9.3e-76
Identity = 152/188 (80.85%), Postives = 165/188 (87.77%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           M  AQDPFY+VK+EIQ+SIDKLQ SFHQWERI  D+GE+V  TKELLA+CESIEW+VDEL
Sbjct: 1   MSKAQDPFYIVKEEIQDSIDKLQLSFHQWERIPPDTGEQVHLTKELLANCESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           DK I+VAARDPSWYGID  ELEKRRRWTSTARTQVGN+KK V AGKE   TA A  MRRE
Sbjct: 61  DKTISVAARDPSWYGIDEVELEKRRRWTSTARTQVGNIKKAVVAGKENGNTAIA--MRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMRLPN+H+ DRSN YSA + NDDFI SESDRQ+LLIKQQDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNSHQPDRSNQYSA-EDNDDFIASESDRQMLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELLAQ 189
           IHEELLAQ
Sbjct: 181 IHEELLAQ 185

[Close]
BLAST of CSPI06G05990 vs. TrEMBL
Match: W9RG30_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000959 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.0e-75
Identity = 152/190 (80.00%), Postives = 164/190 (86.32%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           MPSAQDPFYVVK+EIQESI+KLQSSFHQWERI +++GE++   KELLASCESIEW+VDEL
Sbjct: 1   MPSAQDPFYVVKEEIQESIEKLQSSFHQWERIHANTGEQIHLAKELLASCESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQ--IGTASASGMR 120
           DK IAVAA+DP+ YGID  ELEKRRRWTS ARTQV  VKK V  GKE    GT SA+ M 
Sbjct: 61  DKTIAVAAKDPALYGIDGIELEKRRRWTSNARTQVSTVKKAVKRGKEANGTGTTSANAMH 120

Query: 121 RELMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVG 180
           RELMRLPN HETDRSN YSAH  NDDFI SESDRQLLLIKQQDEELDELSASV+RIGGVG
Sbjct: 121 RELMRLPNLHETDRSNPYSAHD-NDDFIASESDRQLLLIKQQDEELDELSASVQRIGGVG 180

Query: 181 LTIHEELLAQ 189
           LTIHEELLAQ
Sbjct: 181 LTIHEELLAQ 189

[Close]
BLAST of CSPI06G05990 vs. TAIR10
Match: AT1G28490.1 (AT1G28490.1 syntaxin of plants 61)

HSP 1 Score: 254.6 bits (649), Expect = 4.9e-68
Identity = 131/188 (69.68%), Postives = 153/188 (81.38%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           M SAQDPFY+VK+EIQ+SIDKLQS+FH+WERIS D G++    KEL+A+C SIEW+VDEL
Sbjct: 1   MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           +KAI VAA+DPSWYGID AELEKRRRWTS ARTQV NVK  V AGK   G   AS +RRE
Sbjct: 61  EKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMR+PN+ E  R + Y     +D F+ SESDRQ+LLIKQQDEELDELS SV+RIGGVGLT
Sbjct: 121 LMRMPNSGEASRYDQYGGRD-DDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLT 180

Query: 181 IHEELLAQ 189
           IH+EL+AQ
Sbjct: 181 IHDELVAQ 187

[Close]
BLAST of CSPI06G05990 vs. NCBI nr
Match: gi|700191050|gb|KGN46254.1| (hypothetical protein Csa_6G078000 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 7.8e-100
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEW+VDEL
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE
Sbjct: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELLAQVYIS 193
           IHEELLAQVYIS
Sbjct: 181 IHEELLAQVYIS 192

[Close]
BLAST of CSPI06G05990 vs. NCBI nr
Match: gi|449474827|ref|XP_004154296.1| (PREDICTED: syntaxin-61 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-97
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEW+VDEL
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE
Sbjct: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELLAQ 189
           IHEELLAQ
Sbjct: 181 IHEELLAQ 188

[Close]
BLAST of CSPI06G05990 vs. NCBI nr
Match: gi|659120260|ref|XP_008460099.1| (PREDICTED: syntaxin-61 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 2.0e-95
Identity = 183/188 (97.34%), Postives = 186/188 (98.94%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEW+VDEL
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120
           DKAIAVAARDPSWYGID+AELEKRRRWTSTARTQVGNVKKVVGAGKEQ G ASASGMRRE
Sbjct: 61  DKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQVGNVKKVVGAGKEQTGIASASGMRRE 120

Query: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180
           LMRLPNAHETDRSNLY+AHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNAHETDRSNLYTAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELLAQ 189
           IHEELLAQ
Sbjct: 181 IHEELLAQ 188

[Close]
BLAST of CSPI06G05990 vs. NCBI nr
Match: gi|566165008|ref|XP_002305773.2| (Syntaxin 61 family protein [Populus trichocarpa])

HSP 1 Score: 303.5 bits (776), Expect = 2.6e-79
Identity = 159/190 (83.68%), Postives = 174/190 (91.58%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           M SAQDPFY+VK+EIQESIDKLQSSFHQWERISSDSGE+V+ TKELLA+CESIEW+VDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKE--QIGTASASGMR 120
           DKAI+VAARDPSWYGID AELEKRRRWTSTARTQVGNVKK V AGKE    GTAS +GMR
Sbjct: 61  DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR 120

Query: 121 RELMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVG 180
           RELMR+P+A +TD+SN Y+  Q NDDFI SESDRQ+LLIKQQD+ELDELSASVERIGGVG
Sbjct: 121 RELMRMPDAQQTDKSNQYT--QDNDDFIQSESDRQMLLIKQQDDELDELSASVERIGGVG 180

Query: 181 LTIHEELLAQ 189
           LTIHEELLAQ
Sbjct: 181 LTIHEELLAQ 188

[Close]
BLAST of CSPI06G05990 vs. NCBI nr
Match: gi|743846501|ref|XP_011027754.1| (PREDICTED: syntaxin-61 [Populus euphratica])

HSP 1 Score: 302.0 bits (772), Expect = 7.6e-79
Identity = 159/190 (83.68%), Postives = 172/190 (90.53%), Query Frame = 1 

Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWKVDEL 60
           M SAQDPFY+VK+EIQESIDKLQSSFHQWERISSDSGE V+ TKELLA+CESIEW+VDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGELVRLTKELLAACESIEWQVDEL 60

Query: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKE--QIGTASASGMR 120
           DKAI+VAARDPSWYGID AELEKRRRWTSTARTQVGNVKK V AGKE    GTAS +GMR
Sbjct: 61  DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR 120

Query: 121 RELMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVG 180
           RELMR+P+  +TD+SN Y+  Q NDDFI SESDRQ+LLIKQQDEELDELSASVERIGGVG
Sbjct: 121 RELMRMPDTQQTDKSNQYT--QDNDDFIQSESDRQMLLIKQQDEELDELSASVERIGGVG 180

Query: 181 LTIHEELLAQ 189
           LTIHEELLAQ
Sbjct: 181 LTIHEELLAQ 188

The following BLAST results are available for this feature:
BLAST of CSPI06G05990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYP61_ARATH8.7e-6769.68Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1[more]
STX6_PONAB3.8e-1427.27Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1[more]
STX6_HUMAN3.8e-1427.27Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1[more]
STX6_RAT4.2e-1329.38Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1[more]
STX6_MOUSE4.2e-1329.90Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1[more]
BLAST of CSPI06G05990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBM4_CUCSA5.4e-10099.48Uncharacterized protein OS=Cucumis sativus GN=Csa_6G078000 PE=4 SV=1[more]
B9H2P0_POPTR1.8e-7983.68Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0004s05020g PE=4 SV=2[more]
M5WIL7_PRUPE5.8e-7882.98Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010587mg PE=4 SV=1[more]
A0A061GE34_THECC9.3e-7680.85Syntaxin of plants 61 OS=Theobroma cacao GN=TCM_029787 PE=3 SV=1[more]
W9RG30_9ROSA6.0e-7580.00Uncharacterized protein OS=Morus notabilis GN=L484_000959 PE=3 SV=1[more]
BLAST of CSPI06G05990 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28490.14.9e-6869.68 syntaxin of plants 61[more]
BLAST of CSPI06G05990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191050|gb|KGN46254.1|7.8e-10099.48hypothetical protein Csa_6G078000 [Cucumis sativus][more]
gi|449474827|ref|XP_004154296.1|1.2e-9799.47PREDICTED: syntaxin-61 [Cucumis sativus][more]
gi|659120260|ref|XP_008460099.1|2.0e-9597.34PREDICTED: syntaxin-61 [Cucumis melo][more]
gi|566165008|ref|XP_002305773.2|2.6e-7983.68Syntaxin 61 family protein [Populus trichocarpa][more]
gi|743846501|ref|XP_011027754.1|7.6e-7983.68PREDICTED: syntaxin-61 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE
IPR015260Syntaxin-6_N
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0048193Golgi vesicle transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0061025 membrane fusion
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016020 membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G05990.1CSPI06G05990.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010989t-SNAREunknownSSF47661t-snare proteinscoord: 5..100
score: 1.41
IPR015260Syntaxin 6, N-terminalPFAMPF09177Syntaxin-6_Ncoord: 6..99
score: 1.7
NoneNo IPR availableGENE3DG3DSA:1.20.5.110coord: 156..188
score: 5.
NoneNo IPR availableGENE3DG3DSA:1.20.58.90coord: 3..102
score: 1.7
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 5..191
score: 3.1
NoneNo IPR availablePANTHERPTHR19957:SF111SUBFAMILY NOT NAMEDcoord: 5..191
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G05990Cla006972Watermelon (97103) v1cpiwmB556
CSPI06G05990Csa6G078000Cucumber (Chinese Long) v2cpicuB314
CSPI06G05990MELO3C022490Melon (DHL92) v3.5.1cpimeB433
CSPI06G05990ClCG06G000520Watermelon (Charleston Gray)cpiwcgB503
CSPI06G05990Lsi09G018900Bottle gourd (USVL1VR-Ls)cpilsiB404
CSPI06G05990MELO3C022490.2Melon (DHL92) v3.6.1cpimedB431
CSPI06G05990CsaV3_6G006300Cucumber (Chinese Long) v3cpicucB364
CSPI06G05990Cla97C06G109770Watermelon (97103) v2cpiwmbB495
CSPI06G05990Bhi12G002274Wax gourdcpiwgoB548
CSPI06G05990Cucsa.362660Cucumber (Gy14) v1cgycpiB540
CSPI06G05990CmaCh17G000420Cucurbita maxima (Rimu)cmacpiB373
CSPI06G05990CmoCh17G000430Cucurbita moschata (Rifu)cmocpiB362
CSPI06G05990CsGy6G005980Cucumber (Gy14) v2cgybcpiB288
CSPI06G05990Carg10192Silver-seed gourdcarcpiB0263
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G05990Wild cucumber (PI 183967)cpicpiB126
CSPI06G05990Cucumber (Gy14) v1cgycpiB393
CSPI06G05990Cucurbita maxima (Rimu)cmacpiB273
CSPI06G05990Cucurbita maxima (Rimu)cmacpiB856
CSPI06G05990Cucurbita maxima (Rimu)cmacpiB915
CSPI06G05990Cucurbita moschata (Rifu)cmocpiB263
CSPI06G05990Cucurbita moschata (Rifu)cmocpiB839
CSPI06G05990Cucurbita moschata (Rifu)cmocpiB893
CSPI06G05990Cucumber (Chinese Long) v2cpicuB283
CSPI06G05990Melon (DHL92) v3.5.1cpimeB496
CSPI06G05990Watermelon (Charleston Gray)cpiwcgB494
CSPI06G05990Watermelon (97103) v1cpiwmB508
CSPI06G05990Cucurbita pepo (Zucchini)cpecpiB145
CSPI06G05990Cucurbita pepo (Zucchini)cpecpiB324
CSPI06G05990Cucurbita pepo (Zucchini)cpecpiB633
CSPI06G05990Cucurbita pepo (Zucchini)cpecpiB879
CSPI06G05990Bottle gourd (USVL1VR-Ls)cpilsiB470
CSPI06G05990Melon (DHL92) v3.6.1cpimedB483
CSPI06G05990Cucumber (Gy14) v2cgybcpiB141
CSPI06G05990Silver-seed gourdcarcpiB0653
CSPI06G05990Silver-seed gourdcarcpiB0999
CSPI06G05990Silver-seed gourdcarcpiB1118
CSPI06G05990Cucumber (Chinese Long) v3cpicucB335
CSPI06G05990Watermelon (97103) v2cpiwmbB485