CmaCh17G000420 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTACCCTCTCCTTGGATTCGTGCTCGTTATCGTCGTCGTATGTTGTCATTCCGTCGAACTCGTCCTTCTTGGGGCTGTTGCTGTCGTTGCCGCCATGTTCAGAGAAGTAAAAGCTCAGTTCCCGCCCGCTTCACTGAGCTTTGAAGTATATATATATATACTTCTGATGTACACTTAGTTTTTCACCCAATTAAAAATCCATTTAAATGGTATTTCAAAAAAAAAAGTCATTTAAATAACATTTTCTTAAACCTTCGAATATAAACATAATAATTGACCTATTAAATTATTTATAGTCCAAATATTTAAGTTTTATATTCAAACATATAAAATTATGTCACTCATTAAATAATAAAACTTAGCAATTTAAGAAAGTATTGAAATTATTTATTAATCACTATGAATAGAACTTTAATTTTTTTTTAAAAAAAATAGACAAATAATGAAATTGGAAAAGTATTTAGATTTGGAGAGAAACGAGGAGGAGAGTTTCTCTCTCTTCGAATCCTCTCCACAGGTCGTTGCGCTCTCCCTTCACCAGCAAGCATTCAGCAATTTCTTCATCAGATCTACACTCTCCACCGCCCTCATTCTCAGGTTTGCCTCTTCTCTTTCTCGTTATCACTTTCAGAACGCCGATTCTCGATCACTTTCTCCTTCCTGGTTCGTCTTTGTTTTGCATTAATCGATAAGCTCCAATTCTAGATCTGGCGTAGTGATGGGGAGGGGATTTTTTTCTGCTAATTTCCAATTGATGATCTCAGCATGCAATGGAGTTTTTTTTTTCTGCTAATTTTTTGTTTGAATTGGAGCGAAACAAATTCGCGCGCGTAAATTCTATTTTATGCGCTATCGAGAGTGAAACTAAGCTGTTTTGAGGGTGTGAGTTCGGTTATTCTTTCGTTCTGTTGAATGTGAACGGAGTATTGATTTCTGGAAGTCATTTTGTTAGCTATTATTTATTGCAGTTGAACATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTGTAAGTTGGTTGCTTGCATCTTGTTATGATTACCTACTGTGCTTGAATTATGCTCACCGACTTATTTAAATCAAGCTCCTTTGAAGCATGTTCTTTTTTTTCTGCAATATTGATTTGGTTGTTAAAAGAAAAAGAGTGTGAATTAGAACAGGGAGATTGGAGAGTGGAAATAGCGATAAAGTTTGAAGCTATATTCGCTTGCTGCAAAATGAACCAATATCAACAAACGAGACATGATGAAAATTCTCATACAAAAATGTCAAAATACAAATATAACTAGAACTACCAAACAATGTGGAGACTGGAATGCACATTAAATCACAACGTTTGTAGCAACTGCCAGTGTTTGGAGTATTTCGGTAGAGAACAAATATGATTGCTGTAAATGGAACCTTCTCCTTTCACTTGCTGACATCTTGTAGATCCTGATGAGATTTTTTCTTATCTCCAAAAATATATCCTGTCATTTGTATCTAGTATTTCTGTCAACACGAATATTCTGTGTGAATAGACGAACATGGCATCCCAATACCCAGCATTCCTTGAACAGGCATAAGTTACGGTAGACTACATGAAGGATATTGTTTGAAGGTCTGATTATGTCTTATTCTAGAAAACAATCGAATGCCTCATTGTTAAGCCTGTTCTACATTTCTAGATCGAATATTGATGAATGATTATTACTAGTTCCAGATGAAAGTATTATGAATTCCTCAAAAAAAATTATTGACAGATCTGCATGATCCAGTTTCTTGTTTCCAAATCATGAAATCCTAAAAGAAAAAACTAATGTTGGAAGTTCTCTGACTTGATTCTGACATCCATAAAGTGTTGATTTACATTGGTGCTTGAACAGACGATTTGATCTTTCAGACCTTTGCTTCTCTAGTAATTATTTTTGGTCGCAAATAATTTATTTGTGAATTACATGTTGTTTTTGAAGTCAATGTTGGTTTTCTACCACTTTTTTTGGCTACATGTGTATTTTTTATAATGTGTTTTTTTTTTTATCTCTATCAGATCGATAAAGTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATCCAGGAGAGAGAGCACAACAAACAAAAGAGTTGCTCGCTTCCTGTGAGAGTATTGAATGGCAGGTAAGTTCTCAATTTCTAAACCATGTTGTCTGCTTCTTTTATCTGTTGTGCAACTTAATTTGTTCTGGGGCTTCAATGTGTGACTAAGCATGATTCAATATGTTGCTACTGGTGCTTCTAATTTTGTCTAGTGACATAAGCTTTCTTGATAGGAAGGTGGACGAATTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCTTCTTGGTATGGCATTGATCATGCGGAACTTGAGAAACGAAGGAGGTGGACGAGTACAGCTAGGATGCAGGTATTACTTGTCTGGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATCAACAGTTGAGTTAAAATAAAGTAATAAACAAGTTTGCAATCCTTGTTTTTTCCATATAGTTATTGATGTGCTTCTTGTGGTCCTACGGTTATACCACTGAAGTTTATTTTCAAATATGTTAAGAAATTCTTTGTCCAAAGCCATTATAAAGACTAAAATATTCAAGTAATATGTCCATTTCTTCTAATTAGTTTGAACAGAGCTTCTCTTATGCATTTATTTTGTTACTTTACTAGGTTGGAAATGTTAAGAAAGTAGTAGGAGCTGGAAAGGAGCAAACTGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCCAATGCACTTGAAACAGAAGAATCAAACTTATATTCAGCCCACCAAGAAAATGATGACTTCATCTCATCCGAATCAGATAGACAGCTGCTTCTAATAAGGTAATGTATATATTTCTTACCCGGGTTGTTAACAGAATCCTCCTGCTTAAGTGGAAACCTATCTCTAAATCAAGTATGATGATGAAGTACAAGAATAACATAATAAAATTTATGTAGAGTAGAGTACTTGTCAACTCACCTGGATTTTGATCCCCTGCAAAATGTGTATTCATAGGCAGCAGGACGAGGAGTTGGATGAATTGAGTGCGAGTGTGGTGAGAATTGGAGGTGTTGGGCTCACAATACATGAAGAGCTCCTTGCACAGGTGTACATTCTGTAGGTTGCAGTGCTGCTAATTGATTCTCTCTATACATCTGCAGTCTGATGAACTTTCTAAGACTCAAAAAAATCTTTCTATGCAGGATAAAATTATTGACAACCTAGGGATGGAAATGGACAGTACATCGAATCGTCTTGATTTTGTTCAGGTGTGTTCATGATCTCAATGCTGGTCATATGCACGAATATTAGCTTAAGATTCACAATAATGAGATTCTGAAATCTTTAGCAGTAATCAAATCAAATGGGTTTTTTCTAGAAAAAAAAAAAAAAAATCTATTTTGGTTGTTCAGCTCTGAAGTTGTTCTATTTTATTCCTTGAACTTTCAAATTTGTTTAATTTTGGTCACTTAACTTTTAAAAGGTTTATTTTAGTCTTTAGACTTCCAAAAAAAAGAAAAAACCATTTTGGTCCTTGCCTTTATTTTATTTTTAACAAACTAATGACAAATATGTGTATCAACACGAGATTGAAACAACGAGCCTTTGACTAGTGGATATTAGATGGAAATAAAATATAGCAAGGACCAAAATGATTATTATTTCAAATTTCATATATTAAAATAGATATTTTAAAAGTCTATGAACTAAAGTAGAACAAATTCGAAAGCTTAGTGAGTGACCAAAATGGTATTTAAACATTGCTTTCCCCTTTTATCTTGTATGGAACCTTACAGAAAAAAGTAGCTGTGGTGATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTATTCTTGGTAGCTTTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAGTTTTTGTTCATCATAATTCACACGAGGCATCATCCAGCCTTTATCTTTGTTTTGAAGTTTCTTTGATAGAGTTGGTATACCTTAATTTCTTGTAATTATAAATCTCTACAGGTTTATGATNG ATGGATTACCCTCTCCTTGGATTCGTGCTCGTTATCGTCGTCGTATGTTGTCATTCCGTCGAACTCGTCCTTCTTGGGGCTGTTGCTGTCGTTGCCGCCATGTTCAGAGAAGTAAAAGCTCAGTTCCCGCCCGCTTCACTGAGCTTTGAAACAAATAATGAAATTGGAAAAGTATTTAGATTTGGAGAGAAACGAGGAGGAGAGTTTCTCTCTCTTCGAATCCTCTCCACAGGTCGTTGCGCTCTCCCTTCACCAGCAAGCATTCAGCAATTTCTTCATCAGATCTACACTCTCCACCGCCCTCATTCTCAGTTGAACATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTATCGATAAAGTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATCCAGGAGAGAGAGCACAACAAACAAAAGAGTTGCTCGCTTCCTGTGAGAGTATTGAATGGCAGGTGGACGAATTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCTTCTTGGTATGGCATTGATCATGCGGAACTTGAGAAACGAAGGAGGTGGACGAGTACAGCTAGGATGCAGGTTGGAAATGTTAAGAAAGTAGTAGGAGCTGGAAAGGAGCAAACTGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCCAATGCACTTGAAACAGAAGAATCAAACTTATATTCAGCCCACCAAGAAAATGATGACTTCATCTCATCCGAATCAGATAGACAGCTGCTTCTAATAAGGCAGCAGGACGAGGAGTTGGATGAATTGAGTGCGAGTGTGGTGAGAATTGGAGGTGTTGGGCTCACAATACATGAAGAGCTCCTTGCACAGGATAAAATTATTGACAACCTAGGGATGGAAATGGACAGTACATCGAATCGTCTTGATTTTGTTCAGAAAAAAGTAGCTGTGGTGATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTATTCTTGGTAGCTTTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAGTTTTTGTTCATCATAATTCACACGAGGCATCATCCAGCCTTTATCTTTGTTTTGAAGTTTCTTTGATAGAGTTGGTATACCTTAATTTCTTGTAATTATAAATCTCTACAGGTTTATGATNG ATGGATTACCCTCTCCTTGGATTCGTGCTCGTTATCGTCGTCGTATGTTGTCATTCCGTCGAACTCGTCCTTCTTGGGGCTGTTGCTGTCGTTGCCGCCATGTTCAGAGAAGTAAAAGCTCAGTTCCCGCCCGCTTCACTGAGCTTTGAAACAAATAATGAAATTGGAAAAGTATTTAGATTTGGAGAGAAACGAGGAGGAGAGTTTCTCTCTCTTCGAATCCTCTCCACAGGTCGTTGCGCTCTCCCTTCACCAGCAAGCATTCAGCAATTTCTTCATCAGATCTACACTCTCCACCGCCCTCATTCTCAGTTGAACATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTATCGATAAAGTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATCCAGGAGAGAGAGCACAACAAACAAAAGAGTTGCTCGCTTCCTGTGAGAGTATTGAATGGCAGGTGGACGAATTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCTTCTTGGTATGGCATTGATCATGCGGAACTTGAGAAACGAAGGAGGTGGACGAGTACAGCTAGGATGCAGGTTGGAAATGTTAAGAAAGTAGTAGGAGCTGGAAAGGAGCAAACTGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCCAATGCACTTGAAACAGAAGAATCAAACTTATATTCAGCCCACCAAGAAAATGATGACTTCATCTCATCCGAATCAGATAGACAGCTGCTTCTAATAAGGCAGCAGGACGAGGAGTTGGATGAATTGAGTGCGAGTGTGGTGAGAATTGGAGGTGTTGGGCTCACAATACATGAAGAGCTCCTTGCACAGGATAAAATTATTGACAACCTAGGGATGGAAATGGACAGTACATCGAATCGTCTTGATTTTGTTCAGAAAAAAGTAGCTGTGGTGATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTATTCTTGGTAGCTTTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAG MDYPLLGFVLVIVVVCCHSVELVLLGAVAVVAAMFREVKAQFPPASLSFETNNEIGKVFRFGEKRGGEFLSLRILSTGRCALPSPASIQQFLHQIYTLHRPHSQLNMPSAQDPFYVVKDEIQESIDKVQSSFHQWERISSDPGERAQQTKELLASCESIEWQVDELDKAIAVAARDPSWYGIDHAELEKRRRWTSTARMQVGNVKKVVGAGKEQTGTASASGMRRELMRLPNALETEESNLYSAHQENDDFISSESDRQLLLIRQQDEELDELSASVVRIGGVGLTIHEELLAQDKIIDNLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFIILFVLVFLT
BLAST of CmaCh17G000420 vs. Swiss-Prot
Match: SYP61_ARATH (Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.4e-86 Identity = 173/246 (70.33%), Postives = 204/246 (82.93%), Query Frame = 1
BLAST of CmaCh17G000420 vs. Swiss-Prot
Match: STX6_CHICK (Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.9e-19 Identity = 75/255 (29.41%), Postives = 134/255 (52.55%), Query Frame = 1
BLAST of CmaCh17G000420 vs. Swiss-Prot
Match: STX6_MOUSE (Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.9e-19 Identity = 70/253 (27.67%), Postives = 130/253 (51.38%), Query Frame = 1
BLAST of CmaCh17G000420 vs. Swiss-Prot
Match: STX6_PONAB (Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.2e-19 Identity = 71/253 (28.06%), Postives = 130/253 (51.38%), Query Frame = 1
BLAST of CmaCh17G000420 vs. Swiss-Prot
Match: STX6_HUMAN (Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.2e-19 Identity = 71/253 (28.06%), Postives = 130/253 (51.38%), Query Frame = 1
BLAST of CmaCh17G000420 vs. TrEMBL
Match: B9H2P0_POPTR (Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0004s05020g PE=4 SV=2) HSP 1 Score: 370.9 bits (951), Expect = 1.7e-99 Identity = 201/248 (81.05%), Postives = 226/248 (91.13%), Query Frame = 1
BLAST of CmaCh17G000420 vs. TrEMBL
Match: U5FVV6_POPTR (Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0011s05870g PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.7e-99 Identity = 199/248 (80.24%), Postives = 223/248 (89.92%), Query Frame = 1
BLAST of CmaCh17G000420 vs. TrEMBL
Match: M5WIL7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010587mg PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 6.4e-99 Identity = 200/246 (81.30%), Postives = 219/246 (89.02%), Query Frame = 1
BLAST of CmaCh17G000420 vs. TrEMBL
Match: A0A067JDJ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03045 PE=3 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 1.2e-97 Identity = 199/248 (80.24%), Postives = 218/248 (87.90%), Query Frame = 1
BLAST of CmaCh17G000420 vs. TrEMBL
Match: W9RG30_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000959 PE=3 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.1e-95 Identity = 199/248 (80.24%), Postives = 215/248 (86.69%), Query Frame = 1
BLAST of CmaCh17G000420 vs. TAIR10
Match: AT1G28490.1 (AT1G28490.1 syntaxin of plants 61) HSP 1 Score: 321.2 bits (822), Expect = 7.7e-88 Identity = 173/246 (70.33%), Postives = 204/246 (82.93%), Query Frame = 1
BLAST of CmaCh17G000420 vs. NCBI nr
Match: gi|449474827|ref|XP_004154296.1| (PREDICTED: syntaxin-61 [Cucumis sativus]) HSP 1 Score: 431.4 bits (1108), Expect = 1.5e-117 Identity = 232/246 (94.31%), Postives = 238/246 (96.75%), Query Frame = 1
BLAST of CmaCh17G000420 vs. NCBI nr
Match: gi|659120260|ref|XP_008460099.1| (PREDICTED: syntaxin-61 [Cucumis melo]) HSP 1 Score: 429.5 bits (1103), Expect = 5.7e-117 Identity = 231/246 (93.90%), Postives = 237/246 (96.34%), Query Frame = 1
BLAST of CmaCh17G000420 vs. NCBI nr
Match: gi|743846501|ref|XP_011027754.1| (PREDICTED: syntaxin-61 [Populus euphratica]) HSP 1 Score: 372.1 bits (954), Expect = 1.1e-99 Identity = 202/248 (81.45%), Postives = 225/248 (90.73%), Query Frame = 1
BLAST of CmaCh17G000420 vs. NCBI nr
Match: gi|694363426|ref|XP_009360989.1| (PREDICTED: syntaxin-61-like isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 371.3 bits (952), Expect = 1.8e-99 Identity = 202/246 (82.11%), Postives = 220/246 (89.43%), Query Frame = 1
BLAST of CmaCh17G000420 vs. NCBI nr
Match: gi|566165008|ref|XP_002305773.2| (Syntaxin 61 family protein [Populus trichocarpa]) HSP 1 Score: 370.9 bits (951), Expect = 2.4e-99 Identity = 201/248 (81.05%), Postives = 226/248 (91.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |